Query psy9316
Match_columns 264
No_of_seqs 126 out of 1440
Neff 9.5
Searched_HMMs 29240
Date Sat Aug 17 00:15:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 2.5E-32 8.7E-37 236.9 30.4 215 16-238 88-332 (344)
2 1vyh_C Platelet-activating fac 100.0 2.2E-31 7.6E-36 235.8 29.6 230 17-258 115-386 (410)
3 2pm7_B Protein transport prote 100.0 2.9E-31 1E-35 224.9 29.1 221 15-237 14-285 (297)
4 3frx_A Guanine nucleotide-bind 100.0 5.9E-31 2E-35 225.4 29.9 210 8-225 13-256 (319)
5 4g56_B MGC81050 protein; prote 100.0 4E-31 1.4E-35 230.1 29.2 217 14-238 98-344 (357)
6 2ynn_A Coatomer subunit beta'; 100.0 4.4E-31 1.5E-35 224.6 28.7 233 14-257 17-275 (304)
7 3iz6_a 40S ribosomal protein R 100.0 5.1E-32 1.7E-36 237.4 21.6 241 14-258 70-350 (380)
8 3bg1_A Protein SEC13 homolog; 100.0 2.5E-31 8.5E-36 227.4 24.8 222 14-237 17-293 (316)
9 4gqb_B Methylosome protein 50; 100.0 1.8E-31 6.1E-36 231.5 23.2 202 49-258 80-305 (344)
10 1got_B GT-beta; complex (GTP-b 100.0 8.1E-30 2.8E-34 220.1 30.5 231 17-258 62-318 (340)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.9E-30 3.4E-34 220.1 28.6 238 16-258 22-309 (345)
12 1vyh_C Platelet-activating fac 100.0 7.5E-30 2.6E-34 225.9 28.4 215 13-236 153-410 (410)
13 2ynn_A Coatomer subunit beta'; 100.0 7.1E-30 2.4E-34 217.1 25.9 206 43-258 5-234 (304)
14 3ow8_A WD repeat-containing pr 100.0 1.1E-29 3.7E-34 218.0 27.2 224 23-258 48-296 (321)
15 2xzm_R RACK1; ribosome, transl 100.0 5.3E-29 1.8E-33 215.1 31.7 210 20-239 36-287 (343)
16 4g56_B MGC81050 protein; prote 100.0 8.6E-31 2.9E-35 228.0 20.1 237 13-258 51-317 (357)
17 2pbi_B Guanine nucleotide-bind 100.0 6E-29 2.1E-33 216.0 30.9 235 14-258 68-332 (354)
18 3ow8_A WD repeat-containing pr 100.0 8.4E-29 2.9E-33 212.4 28.3 211 17-236 87-320 (321)
19 2pm7_B Protein transport prote 100.0 8.5E-29 2.9E-33 209.8 27.5 192 45-238 3-239 (297)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-29 1.4E-33 216.1 25.2 193 43-237 7-225 (345)
21 2hes_X YDR267CP; beta-propelle 100.0 8.5E-29 2.9E-33 212.9 27.0 219 15-237 63-328 (330)
22 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-28 5.9E-33 208.7 28.0 234 4-239 5-339 (351)
23 2hes_X YDR267CP; beta-propelle 100.0 1.8E-28 6.3E-33 210.8 27.8 228 7-238 9-281 (330)
24 4e54_B DNA damage-binding prot 100.0 2.5E-29 8.4E-34 224.0 20.2 190 46-240 114-330 (435)
25 1nr0_A Actin interacting prote 100.0 3.8E-28 1.3E-32 225.4 28.6 237 15-258 195-587 (611)
26 2pbi_B Guanine nucleotide-bind 100.0 1.2E-27 4E-32 207.9 28.9 214 13-234 109-354 (354)
27 3bg1_A Protein SEC13 homolog; 100.0 4.7E-29 1.6E-33 213.3 19.1 191 46-237 8-247 (316)
28 1erj_A Transcriptional repress 100.0 1E-27 3.5E-32 210.9 28.2 233 15-258 69-358 (393)
29 1got_B GT-beta; complex (GTP-b 100.0 7E-28 2.4E-32 207.9 26.6 210 15-234 102-340 (340)
30 3jrp_A Fusion protein of prote 100.0 1.4E-27 4.7E-32 206.4 28.3 223 13-237 14-287 (379)
31 3vl1_A 26S proteasome regulato 100.0 2.2E-27 7.6E-32 208.9 28.4 214 20-240 106-368 (420)
32 3frx_A Guanine nucleotide-bind 100.0 1.5E-27 5.2E-32 204.1 26.3 190 44-238 10-228 (319)
33 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-27 1.4E-31 203.4 28.8 227 6-237 4-274 (372)
34 1nr0_A Actin interacting prote 100.0 2.5E-27 8.5E-32 219.9 28.3 214 17-238 25-271 (611)
35 4ery_A WD repeat-containing pr 100.0 7.4E-27 2.5E-31 198.3 28.9 242 5-258 16-285 (312)
36 1erj_A Transcriptional repress 100.0 7.3E-27 2.5E-31 205.5 29.1 217 16-238 129-390 (393)
37 3dm0_A Maltose-binding peripla 100.0 3.6E-27 1.2E-31 221.6 28.9 223 7-238 379-633 (694)
38 4aow_A Guanine nucleotide-bind 100.0 1.6E-26 5.5E-31 197.3 30.3 236 14-258 42-312 (340)
39 3iz6_a 40S ribosomal protein R 100.0 4.3E-28 1.5E-32 212.4 20.8 193 42-238 57-281 (380)
40 3k26_A Polycomb protein EED; W 100.0 1.8E-27 6.1E-32 204.8 24.0 217 16-236 75-365 (366)
41 4ery_A WD repeat-containing pr 100.0 7.6E-27 2.6E-31 198.3 26.8 187 44-238 16-224 (312)
42 2xyi_A Probable histone-bindin 100.0 6.1E-27 2.1E-31 208.3 27.3 231 6-238 123-411 (430)
43 2pm9_A Protein WEB1, protein t 100.0 1.2E-27 4.1E-32 210.0 22.2 222 17-241 74-341 (416)
44 2xzm_R RACK1; ribosome, transl 100.0 4.8E-27 1.6E-31 202.8 25.2 193 43-237 13-244 (343)
45 3dwl_C Actin-related protein 2 100.0 1.5E-27 5.1E-32 207.3 21.3 222 11-258 12-257 (377)
46 2pm9_A Protein WEB1, protein t 100.0 4.2E-27 1.4E-31 206.5 23.9 235 16-257 18-310 (416)
47 3mmy_A MRNA export factor; mRN 100.0 6.9E-27 2.4E-31 201.1 23.9 216 16-237 45-346 (368)
48 3jrp_A Fusion protein of prote 100.0 1.1E-26 3.7E-31 200.8 24.8 195 43-239 3-242 (379)
49 3i2n_A WD repeat-containing pr 100.0 2.3E-26 7.7E-31 197.5 26.6 240 13-258 21-327 (357)
50 3ei3_B DNA damage-binding prot 100.0 2E-26 6.7E-31 201.0 26.0 194 43-241 65-286 (383)
51 2ymu_A WD-40 repeat protein; u 100.0 3.9E-26 1.3E-30 209.0 28.9 226 17-258 310-555 (577)
52 4a11_B DNA excision repair pro 100.0 5.6E-26 1.9E-30 198.2 28.4 204 33-240 23-279 (408)
53 2ymu_A WD-40 repeat protein; u 100.0 3.8E-26 1.3E-30 209.1 27.7 207 17-234 351-577 (577)
54 4gq1_A NUP37; propeller, trans 100.0 1.4E-26 4.7E-31 203.9 23.0 211 22-236 100-388 (393)
55 4aow_A Guanine nucleotide-bind 100.0 4E-26 1.4E-30 194.9 25.3 193 44-239 31-248 (340)
56 3v7d_B Cell division control p 100.0 1.3E-25 4.5E-30 200.6 29.7 224 4-238 113-382 (464)
57 4ggc_A P55CDC, cell division c 100.0 2.4E-25 8.1E-30 188.3 29.5 207 27-238 39-316 (318)
58 2j04_B YDR362CP, TAU91; beta p 100.0 9.3E-27 3.2E-31 212.4 22.1 205 27-237 177-428 (524)
59 1yfq_A Cell cycle arrest prote 100.0 4.8E-26 1.6E-30 194.7 25.0 235 14-259 15-301 (342)
60 1gxr_A ESG1, transducin-like e 99.9 4.7E-25 1.6E-29 187.5 30.2 211 16-236 103-336 (337)
61 1gxr_A ESG1, transducin-like e 99.9 4.1E-25 1.4E-29 187.9 29.6 216 16-240 57-299 (337)
62 3i2n_A WD repeat-containing pr 99.9 6.6E-26 2.3E-30 194.5 24.7 219 16-237 71-353 (357)
63 3jro_A Fusion protein of prote 99.9 2.9E-26 9.8E-31 217.7 24.5 221 16-238 15-286 (753)
64 4e54_B DNA damage-binding prot 99.9 1.9E-26 6.6E-31 205.3 21.7 220 15-239 124-389 (435)
65 3gre_A Serine/threonine-protei 99.9 1.4E-26 4.7E-31 205.4 20.4 193 41-239 52-294 (437)
66 3odt_A Protein DOA1; ubiquitin 99.9 2.7E-25 9.4E-30 187.3 27.2 235 7-258 13-272 (313)
67 2aq5_A Coronin-1A; WD40 repeat 99.9 8.4E-26 2.9E-30 198.7 24.9 207 29-239 53-301 (402)
68 3dm0_A Maltose-binding peripla 99.9 6.6E-26 2.3E-30 213.0 25.1 216 14-236 434-692 (694)
69 4gga_A P55CDC, cell division c 99.9 9.8E-25 3.3E-29 193.3 30.8 222 27-258 119-370 (420)
70 3zwl_B Eukaryotic translation 99.9 1.4E-24 4.8E-29 186.7 30.7 230 16-258 38-321 (369)
71 4aez_A CDC20, WD repeat-contai 99.9 3.9E-25 1.3E-29 194.6 26.8 221 26-257 106-354 (401)
72 3ei3_B DNA damage-binding prot 99.9 2E-25 6.7E-30 194.6 24.5 219 14-239 77-341 (383)
73 4h5i_A Guanine nucleotide-exch 99.9 4.1E-26 1.4E-30 199.1 20.1 197 17-240 140-346 (365)
74 1sq9_A Antiviral protein SKI8; 99.9 3.9E-25 1.3E-29 193.0 26.3 210 24-238 27-323 (397)
75 2xyi_A Probable histone-bindin 99.9 2.5E-25 8.4E-30 197.9 24.5 213 46-258 123-384 (430)
76 3k26_A Polycomb protein EED; W 99.9 3.8E-26 1.3E-30 196.5 18.5 237 16-258 24-341 (366)
77 3f3f_A Nucleoporin SEH1; struc 99.9 5.3E-25 1.8E-29 187.1 25.3 194 45-238 5-250 (351)
78 1k8k_C P40, ARP2/3 complex 41 99.9 5.9E-25 2E-29 189.8 24.9 205 47-258 4-250 (372)
79 1r5m_A SIR4-interacting protei 99.9 1.9E-24 6.4E-29 189.3 28.4 231 14-258 49-336 (425)
80 3vl1_A 26S proteasome regulato 99.9 6E-25 2.1E-29 193.4 24.8 231 16-259 62-342 (420)
81 2j04_B YDR362CP, TAU91; beta p 99.9 3.4E-25 1.2E-29 202.1 24.0 218 14-238 211-518 (524)
82 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-24 8.7E-29 191.3 27.8 225 17-258 138-391 (435)
83 3odt_A Protein DOA1; ubiquitin 99.9 6.5E-24 2.2E-28 178.8 28.9 214 15-242 64-301 (313)
84 4aez_A CDC20, WD repeat-contai 99.9 1.6E-24 5.4E-29 190.7 25.6 218 15-243 139-386 (401)
85 4a11_B DNA excision repair pro 99.9 5.7E-24 1.9E-28 185.5 28.5 223 14-241 47-369 (408)
86 4gga_A P55CDC, cell division c 99.9 7.1E-24 2.4E-28 187.7 28.6 228 5-242 140-400 (420)
87 3dw8_B Serine/threonine-protei 99.9 2.2E-24 7.6E-29 191.0 25.3 217 17-238 35-374 (447)
88 3v7d_B Cell division control p 99.9 1.1E-23 3.7E-28 188.1 29.9 227 17-258 169-439 (464)
89 3mkq_A Coatomer beta'-subunit; 99.9 3.9E-24 1.3E-28 203.2 28.3 217 14-238 17-260 (814)
90 3lrv_A PRE-mRNA-splicing facto 99.9 7.8E-25 2.7E-29 188.8 21.3 227 23-259 48-318 (343)
91 3gre_A Serine/threonine-protei 99.9 1.6E-24 5.5E-29 192.0 23.4 220 14-240 67-362 (437)
92 1r5m_A SIR4-interacting protei 99.9 3.1E-24 1.1E-28 187.9 24.4 213 16-239 114-363 (425)
93 3zwl_B Eukaryotic translation 99.9 9.4E-24 3.2E-28 181.5 26.7 191 44-239 25-251 (369)
94 1sq9_A Antiviral protein SKI8; 99.9 1.2E-23 4E-28 183.6 27.4 228 5-238 55-396 (397)
95 3jro_A Fusion protein of prote 99.9 1.3E-24 4.5E-29 206.3 23.0 193 45-239 3-240 (753)
96 1p22_A F-BOX/WD-repeat protein 99.9 4.6E-24 1.6E-28 189.7 24.7 222 7-242 168-419 (435)
97 2aq5_A Coronin-1A; WD40 repeat 99.9 3E-24 1E-28 188.7 23.2 217 14-237 85-342 (402)
98 3vu4_A KMHSV2; beta-propeller 99.9 8.7E-24 3E-28 183.5 24.7 193 40-239 8-273 (355)
99 3dw8_B Serine/threonine-protei 99.9 3.7E-24 1.3E-28 189.6 22.8 187 49-237 26-315 (447)
100 1pgu_A Actin interacting prote 99.9 2.7E-23 9.3E-28 190.8 27.7 234 16-258 166-590 (615)
101 3mmy_A MRNA export factor; mRN 99.9 1.1E-23 3.8E-28 181.0 23.5 212 41-258 29-321 (368)
102 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.9E-23 1.7E-27 183.3 28.1 224 17-258 124-368 (445)
103 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.8E-23 1.6E-27 183.4 27.4 216 7-237 194-442 (445)
104 3mkq_A Coatomer beta'-subunit; 99.9 8.3E-24 2.8E-28 201.0 23.2 206 43-258 5-234 (814)
105 1yfq_A Cell cycle arrest prote 99.9 1.6E-23 5.5E-28 178.9 22.2 200 46-253 6-243 (342)
106 2oaj_A Protein SNI1; WD40 repe 99.9 9.5E-24 3.2E-28 204.0 22.2 184 48-239 14-244 (902)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6.9E-23 2.4E-27 182.9 26.2 194 15-235 107-337 (450)
108 3sfz_A APAF-1, apoptotic pepti 99.9 6.1E-23 2.1E-27 203.6 28.4 217 16-237 621-913 (1249)
109 1pgu_A Actin interacting prote 99.9 7.4E-23 2.5E-27 187.9 26.7 219 14-239 22-285 (615)
110 3dwl_C Actin-related protein 2 99.9 1.4E-23 4.9E-28 182.2 20.6 208 16-236 61-280 (377)
111 2oaj_A Protein SNI1; WD40 repe 99.9 2.9E-23 9.8E-28 200.6 24.4 239 15-258 156-628 (902)
112 3sfz_A APAF-1, apoptotic pepti 99.9 1.1E-22 3.8E-27 201.8 24.7 201 46-258 610-888 (1249)
113 2j04_A TAU60, YPL007P, hypothe 99.9 2E-22 6.8E-27 182.6 23.0 176 49-236 83-296 (588)
114 4ggc_A P55CDC, cell division c 99.9 4E-22 1.4E-26 168.4 22.9 197 54-258 28-290 (318)
115 2w18_A PALB2, fancn, partner a 99.9 3.4E-22 1.2E-26 171.1 21.3 169 61-235 143-355 (356)
116 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.8E-21 2E-25 170.4 24.3 165 49-239 100-273 (450)
117 4h5i_A Guanine nucleotide-exch 99.9 8.8E-23 3E-27 178.0 12.0 204 46-258 68-318 (365)
118 3lrv_A PRE-mRNA-splicing facto 99.9 7.2E-21 2.5E-25 163.9 22.6 202 26-235 88-331 (343)
119 4gq1_A NUP37; propeller, trans 99.9 2.5E-22 8.6E-27 176.6 13.1 194 61-258 99-365 (393)
120 3bws_A Protein LP49; two-domai 99.9 3.5E-20 1.2E-24 163.6 25.7 215 16-238 128-391 (433)
121 3vu4_A KMHSV2; beta-propeller 99.9 4.2E-20 1.4E-24 160.3 24.4 197 15-240 63-339 (355)
122 1l0q_A Surface layer protein; 99.9 2.6E-19 8.8E-24 156.0 29.5 220 8-237 28-275 (391)
123 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-20 3.7E-25 171.3 19.6 199 14-225 89-349 (588)
124 1l0q_A Surface layer protein; 99.9 1.9E-19 6.5E-24 156.8 26.2 205 25-238 4-234 (391)
125 2w18_A PALB2, fancn, partner a 99.9 1.1E-20 3.7E-25 161.8 14.8 158 31-195 155-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 4.6E-18 1.6E-22 150.6 27.4 217 33-261 159-407 (415)
127 2oit_A Nucleoporin 214KDA; NH2 99.8 3.4E-19 1.2E-23 158.9 19.5 162 50-238 91-279 (434)
128 3bws_A Protein LP49; two-domai 99.8 1.6E-17 5.6E-22 146.4 28.5 205 22-236 180-431 (433)
129 2oit_A Nucleoporin 214KDA; NH2 99.8 6.7E-19 2.3E-23 157.0 15.3 182 33-236 23-222 (434)
130 1ri6_A Putative isomerase YBHE 99.7 1.7E-15 5.8E-20 128.7 24.4 224 8-236 34-307 (343)
131 1ri6_A Putative isomerase YBHE 99.7 1.2E-15 4.3E-20 129.5 23.3 208 28-236 10-261 (343)
132 3hfq_A Uncharacterized protein 99.7 2.9E-15 1E-19 128.5 25.4 218 17-236 46-316 (347)
133 3u4y_A Uncharacterized protein 99.7 6.4E-15 2.2E-19 125.2 26.2 215 20-238 7-253 (331)
134 2ojh_A Uncharacterized protein 99.7 1.6E-15 5.4E-20 125.7 20.8 203 30-238 19-259 (297)
135 1nir_A Nitrite reductase; hemo 99.7 2.1E-14 7E-19 131.5 25.8 207 24-237 150-402 (543)
136 2hqs_A Protein TOLB; TOLB, PAL 99.7 2.3E-15 7.8E-20 133.2 18.2 209 20-238 72-345 (415)
137 1pby_B Quinohemoprotein amine 99.7 2.7E-14 9.1E-19 121.0 23.6 212 15-238 38-311 (337)
138 3u4y_A Uncharacterized protein 99.7 4.7E-14 1.6E-18 119.8 24.3 219 14-237 43-304 (331)
139 2ojh_A Uncharacterized protein 99.7 2.3E-14 7.9E-19 118.6 21.1 207 14-228 45-293 (297)
140 3vgz_A Uncharacterized protein 99.6 2.3E-13 8E-18 116.1 25.0 198 15-238 93-304 (353)
141 1nir_A Nitrite reductase; hemo 99.6 8E-14 2.7E-18 127.6 23.1 218 17-241 185-462 (543)
142 1jmx_B Amine dehydrogenase; ox 99.6 2E-13 6.9E-18 116.2 24.0 215 16-238 48-326 (349)
143 2z3z_A Dipeptidyl aminopeptida 99.6 3.9E-13 1.3E-17 126.0 25.1 218 15-238 125-436 (706)
144 2ecf_A Dipeptidyl peptidase IV 99.6 1.3E-13 4.4E-18 129.9 20.2 213 15-236 41-366 (741)
145 3hfq_A Uncharacterized protein 99.6 3.6E-13 1.2E-17 115.3 20.2 186 49-237 37-271 (347)
146 1xfd_A DIP, dipeptidyl aminope 99.6 8.8E-14 3E-18 130.5 17.3 201 16-239 22-291 (723)
147 3scy_A Hypothetical bacterial 99.6 1.7E-11 5.8E-16 105.5 29.7 217 16-236 55-336 (361)
148 3scy_A Hypothetical bacterial 99.5 2.7E-12 9.3E-17 110.5 23.4 184 50-236 48-290 (361)
149 3o4h_A Acylamino-acid-releasin 99.5 5.6E-13 1.9E-17 122.4 17.7 209 17-235 28-274 (582)
150 3o4h_A Acylamino-acid-releasin 99.5 1.1E-12 3.6E-17 120.6 18.0 175 51-239 21-229 (582)
151 1k32_A Tricorn protease; prote 99.5 2.9E-12 1E-16 125.5 21.8 204 28-239 353-639 (1045)
152 3vgz_A Uncharacterized protein 99.5 3.8E-12 1.3E-16 108.5 19.2 182 16-228 146-335 (353)
153 1z68_A Fibroblast activation p 99.5 3.7E-13 1.3E-17 126.5 12.6 198 11-234 16-284 (719)
154 2ecf_A Dipeptidyl peptidase IV 99.4 9.7E-12 3.3E-16 117.0 20.8 213 16-236 157-458 (741)
155 1k32_A Tricorn protease; prote 99.4 5.9E-12 2E-16 123.4 19.5 188 14-236 299-501 (1045)
156 2z3z_A Dipeptidyl aminopeptida 99.4 3.9E-12 1.3E-16 119.1 16.6 212 16-236 87-341 (706)
157 1pby_B Quinohemoprotein amine 99.4 5.8E-11 2E-15 100.3 21.2 201 25-237 3-269 (337)
158 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.2E-10 4.2E-15 100.7 21.4 190 31-237 117-341 (365)
159 1xfd_A DIP, dipeptidyl aminope 99.4 4.5E-10 1.5E-14 105.3 26.4 215 15-237 65-393 (723)
160 1jmx_B Amine dehydrogenase; ox 99.4 9.2E-11 3.2E-15 99.6 19.5 149 20-200 8-178 (349)
161 2oiz_A Aromatic amine dehydrog 99.3 1.4E-10 4.8E-15 100.6 20.5 199 32-238 30-335 (361)
162 4a5s_A Dipeptidyl peptidase 4 99.3 3.5E-11 1.2E-15 113.8 17.7 201 12-239 18-296 (740)
163 3pe7_A Oligogalacturonate lyas 99.3 8E-11 2.7E-15 101.9 17.9 189 42-239 21-275 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.4E-10 4.9E-15 100.3 18.6 183 51-236 39-290 (365)
165 3azo_A Aminopeptidase; POP fam 99.3 1.4E-10 4.9E-15 107.7 18.8 211 20-259 88-342 (662)
166 1z68_A Fibroblast activation p 99.3 2.1E-11 7.2E-16 114.5 12.7 138 56-227 20-189 (719)
167 3fvz_A Peptidyl-glycine alpha- 99.3 6.5E-09 2.2E-13 88.6 25.8 199 34-237 70-322 (329)
168 3pe7_A Oligogalacturonate lyas 99.3 5.7E-10 2E-14 96.5 19.4 215 17-237 42-329 (388)
169 1q7f_A NHL, brain tumor CG1071 99.2 1.1E-08 3.9E-13 84.8 26.0 203 24-237 42-280 (286)
170 3e5z_A Putative gluconolactona 99.2 6.6E-09 2.2E-13 86.9 24.1 213 17-236 34-285 (296)
171 1xip_A Nucleoporin NUP159; bet 99.2 2.5E-09 8.6E-14 93.4 20.5 147 53-239 39-193 (388)
172 4a5s_A Dipeptidyl peptidase 4 99.2 4E-10 1.4E-14 106.6 15.8 201 33-238 92-354 (740)
173 3c5m_A Oligogalacturonate lyas 99.1 1.9E-09 6.5E-14 93.1 16.5 214 16-238 41-330 (396)
174 1q7f_A NHL, brain tumor CG1071 99.1 8.8E-09 3E-13 85.5 19.7 181 49-236 27-237 (286)
175 1xip_A Nucleoporin NUP159; bet 99.1 5E-09 1.7E-13 91.5 18.5 135 49-226 86-233 (388)
176 3c5m_A Oligogalacturonate lyas 99.1 2.8E-09 9.7E-14 92.0 16.0 176 54-238 38-274 (396)
177 3e5z_A Putative gluconolactona 99.1 5.3E-08 1.8E-12 81.3 22.4 182 43-236 19-245 (296)
178 2dg1_A DRP35, lactonase; beta 99.1 3.5E-08 1.2E-12 83.5 20.7 176 32-237 26-213 (333)
179 1rwi_B Serine/threonine-protei 99.1 9E-08 3.1E-12 78.4 22.5 200 30-239 43-266 (270)
180 2dg1_A DRP35, lactonase; beta 99.0 5.2E-07 1.8E-11 76.2 27.6 213 17-236 51-315 (333)
181 3azo_A Aminopeptidase; POP fam 99.0 6.9E-09 2.4E-13 96.3 16.9 172 32-236 46-273 (662)
182 2bkl_A Prolyl endopeptidase; m 99.0 2.8E-08 9.4E-13 93.3 17.9 217 17-238 127-398 (695)
183 3fvz_A Peptidyl-glycine alpha- 99.0 1.2E-07 4E-12 80.8 20.3 167 51-237 23-227 (329)
184 2xdw_A Prolyl endopeptidase; a 99.0 2.8E-07 9.6E-12 86.6 24.7 218 17-239 131-416 (710)
185 2mad_H Methylamine dehydrogena 98.9 1.7E-06 5.8E-11 75.2 25.9 224 8-240 63-353 (373)
186 1qks_A Cytochrome CD1 nitrite 98.9 6.6E-07 2.3E-11 82.1 24.0 193 25-237 169-373 (567)
187 2xdw_A Prolyl endopeptidase; a 98.9 1.2E-07 4E-12 89.2 18.9 162 50-238 123-321 (710)
188 3no2_A Uncharacterized protein 98.9 2.1E-07 7.2E-12 77.5 18.4 188 23-240 5-198 (276)
189 2bkl_A Prolyl endopeptidase; m 98.8 1.2E-07 4.2E-12 88.9 16.9 161 49-238 118-305 (695)
190 2gop_A Trilobed protease; beta 98.8 9.8E-07 3.4E-11 74.8 20.7 203 17-236 65-330 (347)
191 2z2n_A Virginiamycin B lyase; 98.8 1E-05 3.4E-10 66.7 26.3 203 24-236 27-254 (299)
192 2gop_A Trilobed protease; beta 98.8 1.2E-06 4E-11 74.3 20.7 166 52-236 59-290 (347)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 7.1E-06 2.4E-10 68.4 25.0 202 30-237 43-299 (314)
194 3dsm_A Uncharacterized protein 98.8 4.8E-07 1.6E-11 77.0 17.1 203 21-236 52-301 (328)
195 3hrp_A Uncharacterized protein 98.7 2.6E-06 8.9E-11 74.9 21.7 190 24-237 143-354 (409)
196 3dr2_A Exported gluconolactona 98.7 4.5E-06 1.5E-10 70.0 21.0 209 17-232 51-302 (305)
197 1rwi_B Serine/threonine-protei 98.7 2.3E-06 8E-11 69.8 18.3 176 53-237 25-222 (270)
198 1yr2_A Prolyl oligopeptidase; 98.6 8.1E-07 2.8E-11 83.9 16.1 157 50-238 161-351 (741)
199 2oiz_A Aromatic amine dehydrog 98.6 9.2E-06 3.1E-10 70.1 21.5 50 168-219 307-360 (361)
200 3g4e_A Regucalcin; six bladed 98.6 3.6E-05 1.2E-09 64.2 24.4 205 17-226 19-261 (297)
201 1yr2_A Prolyl oligopeptidase; 98.6 4.1E-06 1.4E-10 79.1 20.5 177 55-237 212-441 (741)
202 3c75_H MADH, methylamine dehyd 98.6 6E-06 2.1E-10 72.9 19.7 224 9-239 116-404 (426)
203 2z2n_A Virginiamycin B lyase; 98.6 0.00011 3.8E-09 60.3 26.0 196 30-237 75-295 (299)
204 3dsm_A Uncharacterized protein 98.5 6.8E-06 2.3E-10 69.8 17.9 176 52-240 44-256 (328)
205 2qc5_A Streptogramin B lactona 98.5 0.00018 6.3E-09 59.0 25.6 202 25-236 33-259 (300)
206 3sjl_D Methylamine dehydrogena 98.5 5.9E-05 2E-09 65.6 22.8 224 8-238 75-364 (386)
207 2hz6_A Endoplasmic reticulum t 98.5 2.2E-07 7.4E-12 80.7 7.1 166 62-241 8-196 (369)
208 3iuj_A Prolyl endopeptidase; h 98.4 1.2E-05 4.1E-10 75.4 18.2 178 55-237 178-405 (693)
209 3dr2_A Exported gluconolactona 98.4 3.7E-05 1.3E-09 64.3 19.4 165 43-237 36-224 (305)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 6.5E-05 2.2E-09 62.4 20.8 177 52-237 18-256 (314)
211 3hrp_A Uncharacterized protein 98.4 0.00014 4.7E-09 63.8 23.6 169 50-235 217-408 (409)
212 1mda_H Methylamine dehydrogena 98.4 1.5E-05 5.1E-10 69.1 16.8 192 41-238 56-347 (368)
213 1qks_A Cytochrome CD1 nitrite 98.4 6.2E-05 2.1E-09 69.0 21.4 215 17-238 203-478 (567)
214 2qc5_A Streptogramin B lactona 98.4 0.00041 1.4E-08 56.8 24.8 194 31-236 81-299 (300)
215 2ghs_A AGR_C_1268P; regucalcin 98.4 0.00043 1.5E-08 58.5 24.7 203 17-227 55-292 (326)
216 3iuj_A Prolyl endopeptidase; h 98.3 3.2E-05 1.1E-09 72.5 16.9 161 49-238 126-315 (693)
217 3g4e_A Regucalcin; six bladed 98.3 0.00061 2.1E-08 56.6 22.8 175 53-238 14-230 (297)
218 2qe8_A Uncharacterized protein 98.2 6.3E-05 2.1E-09 64.2 17.0 162 52-235 17-224 (343)
219 2mad_H Methylamine dehydrogena 98.2 0.0017 5.7E-08 56.2 25.3 197 34-237 48-307 (373)
220 3no2_A Uncharacterized protein 98.2 0.0014 4.9E-08 54.1 23.7 177 14-225 40-231 (276)
221 2qe8_A Uncharacterized protein 98.2 0.00014 4.8E-09 62.0 17.7 178 49-235 64-276 (343)
222 3sjl_D Methylamine dehydrogena 98.0 0.00054 1.8E-08 59.6 18.7 199 32-237 58-320 (386)
223 2ghs_A AGR_C_1268P; regucalcin 98.0 0.0024 8.1E-08 53.9 21.2 171 54-236 51-259 (326)
224 2ece_A 462AA long hypothetical 97.8 0.0032 1.1E-07 55.6 20.1 166 54-225 140-399 (462)
225 2iwa_A Glutamine cyclotransfer 97.8 0.0079 2.7E-07 49.4 21.0 179 53-238 22-238 (266)
226 1npe_A Nidogen, entactin; glyc 97.8 0.0092 3.2E-07 48.4 23.0 157 52-237 36-198 (267)
227 3nol_A Glutamine cyclotransfer 97.7 0.0052 1.8E-07 50.3 17.5 173 44-225 34-243 (262)
228 2ece_A 462AA long hypothetical 97.6 0.0049 1.7E-07 54.5 18.1 176 59-237 89-352 (462)
229 2hz6_A Endoplasmic reticulum t 97.6 2.7E-05 9.2E-10 67.4 3.0 126 109-242 9-154 (369)
230 3qqz_A Putative uncharacterize 97.6 0.023 8E-07 46.3 23.7 183 46-235 21-251 (255)
231 1ijq_A LDL receptor, low-densi 97.5 0.038 1.3E-06 46.3 24.2 161 51-237 29-195 (316)
232 3nok_A Glutaminyl cyclase; bet 97.4 0.016 5.5E-07 47.5 17.4 172 43-225 45-254 (268)
233 1npe_A Nidogen, entactin; glyc 97.4 0.036 1.2E-06 44.8 23.8 157 52-238 79-239 (267)
234 2fp8_A Strictosidine synthase; 97.4 0.0087 3E-07 50.1 15.9 158 54-237 21-216 (322)
235 3m0c_C LDL receptor, low-densi 97.4 0.065 2.2E-06 50.9 23.1 165 47-237 419-589 (791)
236 2p4o_A Hypothetical protein; p 97.2 0.077 2.6E-06 43.9 27.0 193 31-228 51-279 (306)
237 3mbr_X Glutamine cyclotransfer 97.1 0.071 2.4E-06 43.1 17.8 178 44-231 12-229 (243)
238 1kb0_A Quinohemoprotein alcoho 97.1 0.008 2.7E-07 56.1 13.9 54 188-241 457-511 (677)
239 3v64_C Agrin; beta propeller, 97.1 0.1 3.5E-06 44.3 25.4 158 51-237 72-234 (349)
240 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.11 3.8E-06 44.0 22.3 170 62-240 102-299 (376)
241 3c75_H MADH, methylamine dehyd 97.1 0.0047 1.6E-07 54.4 11.0 69 170-238 122-210 (426)
242 3tc9_A Hypothetical hydrolase; 97.0 0.061 2.1E-06 47.2 18.2 154 53-236 138-300 (430)
243 3p5b_L Low density lipoprotein 97.0 0.15 5E-06 44.3 25.9 187 24-237 84-277 (400)
244 2xe4_A Oligopeptidase B; hydro 97.0 0.064 2.2E-06 50.6 19.0 155 53-237 175-354 (751)
245 2p4o_A Hypothetical protein; p 96.9 0.13 4.4E-06 42.5 19.6 175 52-236 32-241 (306)
246 3v65_B Low-density lipoprotein 96.9 0.17 5.8E-06 43.6 24.3 159 50-237 114-277 (386)
247 1k3i_A Galactose oxidase precu 96.9 0.14 4.9E-06 47.3 20.3 179 54-237 245-497 (656)
248 1yiq_A Quinohemoprotein alcoho 96.8 0.061 2.1E-06 50.3 16.7 56 187-242 454-510 (689)
249 1fwx_A Nitrous oxide reductase 96.7 0.088 3E-06 48.1 16.7 173 52-237 134-361 (595)
250 3hxj_A Pyrrolo-quinoline quino 96.7 0.12 4.2E-06 42.5 16.8 192 27-236 111-323 (330)
251 1mda_H Methylamine dehydrogena 96.7 0.0076 2.6E-07 52.0 9.1 68 170-237 69-158 (368)
252 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.08 2.7E-06 44.9 15.5 167 62-241 52-262 (376)
253 2fp8_A Strictosidine synthase; 96.7 0.22 7.7E-06 41.3 20.3 68 168-236 187-268 (322)
254 2xe4_A Oligopeptidase B; hydro 96.5 0.31 1.1E-05 45.9 19.9 74 55-129 224-305 (751)
255 3sov_A LRP-6, low-density lipo 96.5 0.32 1.1E-05 40.7 23.0 183 52-238 35-239 (318)
256 2iwa_A Glutamine cyclotransfer 96.4 0.03 1E-06 46.0 10.7 113 98-238 22-136 (266)
257 3nok_A Glutaminyl cyclase; bet 96.4 0.037 1.3E-06 45.4 11.0 111 97-239 55-166 (268)
258 3mbr_X Glutamine cyclotransfer 96.4 0.21 7.2E-06 40.3 15.4 131 97-237 21-179 (243)
259 3sre_A PON1, serum paraoxonase 96.3 0.43 1.5E-05 40.7 20.5 48 188-237 203-252 (355)
260 3nol_A Glutamine cyclotransfer 96.3 0.038 1.3E-06 45.2 10.6 112 97-239 43-157 (262)
261 1n7d_A LDL receptor, low-densi 96.2 0.03 1E-06 52.4 10.8 160 52-237 406-571 (699)
262 1fwx_A Nitrous oxide reductase 96.0 0.26 8.8E-06 45.0 15.6 170 61-238 99-309 (595)
263 3kya_A Putative phosphatase; s 96.0 0.29 9.9E-06 43.8 15.7 68 169-236 250-340 (496)
264 1kb0_A Quinohemoprotein alcoho 95.9 0.19 6.6E-06 46.8 14.6 60 178-237 488-567 (677)
265 1kv9_A Type II quinohemoprotei 95.8 0.2 7E-06 46.5 14.6 56 186-241 436-492 (668)
266 2p9w_A MAL S 1 allergenic prot 95.7 0.74 2.5E-05 38.9 15.9 167 52-237 13-215 (334)
267 4hw6_A Hypothetical protein, I 95.7 1 3.4E-05 39.4 24.8 201 33-236 162-432 (433)
268 1k3i_A Galactose oxidase precu 95.3 0.61 2.1E-05 43.0 15.6 72 56-129 190-275 (656)
269 1yiq_A Quinohemoprotein alcoho 95.2 1 3.6E-05 41.9 16.9 70 170-240 239-341 (689)
270 3tc9_A Hypothetical hydrolase; 95.1 1.6 5.4E-05 38.1 25.1 97 33-130 159-259 (430)
271 3hxj_A Pyrrolo-quinoline quino 94.9 1.1 3.7E-05 36.6 14.9 157 63-235 107-282 (330)
272 1flg_A Protein (quinoprotein e 94.7 2.4 8.2E-05 38.6 18.5 57 186-242 464-521 (582)
273 1kv9_A Type II quinohemoprotei 94.7 1.7 5.7E-05 40.3 16.9 69 171-240 235-336 (668)
274 1ijq_A LDL receptor, low-densi 94.4 1.8 6.3E-05 35.8 24.1 155 53-237 78-238 (316)
275 4hw6_A Hypothetical protein, I 94.3 1.9 6.7E-05 37.6 15.5 138 98-236 140-303 (433)
276 1n7d_A LDL receptor, low-densi 94.2 0.51 1.7E-05 44.1 12.2 153 54-236 455-613 (699)
277 3qqz_A Putative uncharacterize 94.1 1.9 6.6E-05 34.8 17.7 141 94-236 24-203 (255)
278 2ad6_A Methanol dehydrogenase 94.0 2.9 0.0001 37.9 16.6 56 186-241 442-498 (571)
279 3sov_A LRP-6, low-density lipo 94.0 2.3 7.8E-05 35.4 20.0 161 72-237 12-197 (318)
280 4a0p_A LRP6, LRP-6, low-densit 93.8 4.1 0.00014 37.5 24.1 157 52-237 37-197 (628)
281 3p5b_L Low density lipoprotein 93.5 3.3 0.00011 35.6 24.0 157 52-238 159-321 (400)
282 3v65_B Low-density lipoprotein 92.9 4 0.00014 34.8 24.8 155 53-237 160-318 (386)
283 3v64_C Agrin; beta propeller, 92.9 3.8 0.00013 34.5 23.6 155 53-237 117-275 (349)
284 3pbp_A Nucleoporin NUP82; beta 92.1 5.8 0.0002 34.7 18.1 152 26-194 34-209 (452)
285 3s94_A LRP-6, low-density lipo 92.0 7.2 0.00025 35.7 23.7 184 51-238 39-244 (619)
286 3m0c_C LDL receptor, low-densi 91.9 8.6 0.00029 36.4 24.3 157 52-238 471-633 (791)
287 3kya_A Putative phosphatase; s 88.9 12 0.00042 33.3 21.4 168 53-235 187-408 (496)
288 2ad6_A Methanol dehydrogenase 86.6 5.2 0.00018 36.2 10.7 44 179-222 476-522 (571)
289 2ism_A Putative oxidoreductase 86.5 13 0.00046 31.1 15.8 72 52-127 31-113 (352)
290 3pbp_A Nucleoporin NUP82; beta 85.3 19 0.00063 31.6 17.0 158 61-234 30-209 (452)
291 1w6s_A Methanol dehydrogenase 85.1 22 0.00076 32.3 17.9 57 186-242 451-508 (599)
292 2g8s_A Glucose/sorbosone dehyd 84.3 17 0.00059 30.4 15.9 53 53-107 19-76 (353)
293 3s94_A LRP-6, low-density lipo 84.3 24 0.00083 32.2 25.3 157 52-237 349-510 (619)
294 3a9g_A Putative uncharacterize 83.6 19 0.00064 30.2 14.6 52 52-107 29-83 (354)
295 1w6s_A Methanol dehydrogenase 82.8 26 0.0009 31.9 13.6 53 188-240 278-345 (599)
296 4a0p_A LRP6, LRP-6, low-densit 82.0 31 0.001 31.6 24.4 183 52-239 340-551 (628)
297 1flg_A Protein (quinoprotein e 81.7 30 0.001 31.3 16.0 49 178-226 497-549 (582)
298 1cru_A Protein (soluble quinop 81.4 27 0.00091 30.5 16.6 54 53-107 28-87 (454)
299 4a2l_A BT_4663, two-component 80.8 37 0.0012 31.7 22.7 154 51-237 356-526 (795)
300 2be1_A Serine/threonine-protei 79.5 1.6 5.5E-05 36.9 3.9 111 110-243 11-136 (339)
301 3s25_A Hypothetical 7-bladed b 79.3 25 0.00085 28.8 12.2 66 57-128 109-176 (302)
302 2xbg_A YCF48-like protein; pho 77.6 28 0.00096 28.5 18.0 155 49-234 160-319 (327)
303 1tl2_A L10, protein (tachylect 75.7 28 0.00096 27.6 11.6 107 97-231 41-157 (236)
304 3v9f_A Two-component system se 74.1 56 0.0019 30.3 20.1 155 51-237 406-568 (781)
305 3amr_A 3-phytase; beta-propell 73.1 42 0.0014 28.4 19.6 181 33-236 50-262 (355)
306 2p9w_A MAL S 1 allergenic prot 70.2 47 0.0016 27.8 22.9 161 14-198 16-216 (334)
307 2xn4_A Kelch-like protein 2; s 70.1 40 0.0014 26.9 11.9 60 177-237 204-276 (302)
308 3v9f_A Two-component system se 68.2 76 0.0026 29.4 22.2 178 51-237 257-478 (781)
309 2vpj_A Kelch-like protein 12; 66.4 47 0.0016 26.4 13.2 60 177-237 206-278 (301)
310 4a2l_A BT_4663, two-component 65.7 86 0.003 29.1 26.6 174 51-238 214-437 (795)
311 3amr_A 3-phytase; beta-propell 65.6 61 0.0021 27.4 15.8 96 141-236 98-209 (355)
312 1tl2_A L10, protein (tachylect 62.6 25 0.00085 27.9 6.9 64 167-235 42-114 (236)
313 3s25_A Hypothetical 7-bladed b 61.5 65 0.0022 26.3 15.6 61 174-236 153-215 (302)
314 2xbg_A YCF48-like protein; pho 59.2 72 0.0025 26.0 17.1 66 166-234 163-231 (327)
315 3ii7_A Kelch-like protein 7; p 59.1 66 0.0023 25.6 12.8 58 178-237 201-272 (306)
316 2uvk_A YJHT; unknown function, 50.6 90 0.0031 25.4 9.1 49 189-237 286-342 (357)
317 4gq2_M Nucleoporin NUP120; bet 49.8 87 0.003 30.2 9.8 32 98-130 237-268 (950)
318 2vpj_A Kelch-like protein 12; 49.4 95 0.0033 24.5 13.9 60 177-237 159-231 (301)
319 1zgk_A Kelch-like ECH-associat 47.0 1.1E+02 0.0037 24.4 9.4 60 177-237 215-287 (308)
320 3das_A Putative oxidoreductase 46.3 1.3E+02 0.0044 25.2 16.5 56 51-107 31-90 (347)
321 4a9v_A PHOX; hydrolase, beta-p 43.3 91 0.0031 28.3 8.1 58 167-225 477-549 (592)
322 1cru_A Protein (soluble quinop 40.9 1.1E+02 0.0037 26.6 8.3 57 168-225 29-99 (454)
323 1bpo_A Protein (clathrin); cla 39.2 2E+02 0.0069 25.3 19.8 187 32-237 124-331 (494)
324 3sre_A PON1, serum paraoxonase 38.6 1.7E+02 0.006 24.4 20.5 59 167-225 222-285 (355)
325 3das_A Putative oxidoreductase 35.3 2E+02 0.0067 24.0 9.1 70 167-237 33-116 (347)
326 3sbq_A Nitrous-oxide reductase 33.7 55 0.0019 29.8 5.1 50 188-237 297-354 (638)
327 4fhn_B Nucleoporin NUP120; pro 31.7 85 0.0029 30.9 6.6 30 100-130 241-270 (1139)
328 4gq2_M Nucleoporin NUP120; bet 30.2 63 0.0021 31.2 5.3 32 209-240 238-269 (950)
329 3zwu_A Alkaline phosphatase PH 29.0 2.2E+02 0.0076 25.8 8.4 57 168-225 478-549 (592)
330 3f7f_A Nucleoporin NUP120; nuc 28.6 67 0.0023 30.0 4.9 22 109-130 231-252 (729)
331 2be1_A Serine/threonine-protei 27.9 1.1E+02 0.0038 25.5 5.8 60 179-238 11-77 (339)
332 2ism_A Putative oxidoreductase 23.9 3E+02 0.01 22.5 21.2 95 17-115 37-152 (352)
333 1xi4_A Clathrin heavy chain; a 23.3 6.3E+02 0.022 26.1 15.5 187 31-237 123-331 (1630)
334 3ei3_A DNA damage-binding prot 21.9 5.8E+02 0.02 25.2 25.9 227 1-237 373-636 (1158)
335 3b7f_A Glycosyl hydrolase, BNR 21.6 3.4E+02 0.012 22.3 18.0 23 51-73 54-77 (394)
336 4fhn_B Nucleoporin NUP120; pro 20.4 65 0.0022 31.7 3.4 30 210-239 241-270 (1139)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=236.86 Aligned_cols=215 Identities=17% Similarity=0.217 Sum_probs=175.1
Q ss_pred eEeecCCCeeEEEeecCceEEecccc--cccc----ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIK----EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~----~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
..+.|.+ .+++++.|+.|++|+.. +.+. .+.+|.+.|.+++|+|+|++|++|+.|++|++||+... ...
T Consensus 88 ~~~s~d~--~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~---~~~ 162 (344)
T 4gqb_B 88 LTWVGER--GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ---VVL 162 (344)
T ss_dssp EEEETTT--EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEE
T ss_pred EEEeCCC--eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEE
Confidence 3555543 35688999999999753 3222 24489999999999999999999999999999998642 233
Q ss_pred EEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------ceEEEeecCCCcEEEE
Q psy9316 90 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------QIMLASGSFDKSVAIF 147 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~~~~~~~~~d~~i~i~ 147 (264)
..+.+|...|.+++|++++..++++++.|++|++||+++++. ..++++|+.|+.|++|
T Consensus 163 ~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 163 SSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEE
Confidence 457899999999999998878899999999999999987542 1257889999999999
Q ss_pred EeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce-eEeecCceEEEEEcCCCC-EEEEee
Q psy9316 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-IIATKGENINITWAPNGN-TIAVGN 225 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~-~~~~~~~~~~v~~sp~g~-~la~gs 225 (264)
|++.... ...+.+|...|.+++|+|++..+|++++.||+|+|||+++++.. ...+.+.+.+++|+|+++ .|++|+
T Consensus 243 d~~~~~~---~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 243 DTKSTSC---VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp ESCC--C---CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ECCCCcE---EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 9875443 24578899999999999987778999999999999999988753 334567799999999987 567899
Q ss_pred CCCeEEEEEcccC
Q psy9316 226 KEDLVTFIDVVKS 238 (264)
Q Consensus 226 ~d~~i~~~d~~~~ 238 (264)
.|+.|++|++...
T Consensus 320 ~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 320 WDHQVVHHVVPTE 332 (344)
T ss_dssp TTSCEEEEECCC-
T ss_pred CCCeEEEEECCCC
Confidence 9999999998753
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-31 Score=235.79 Aligned_cols=230 Identities=21% Similarity=0.310 Sum_probs=188.3
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
.+.|.+. +.++++.|+.+++|+. .+..+.+.+|.+.|.+++|+|++++|++|+.|++|++||+... .....+.+
T Consensus 115 ~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~---~~~~~~~~ 190 (410)
T 1vyh_C 115 IFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF---ECIRTMHG 190 (410)
T ss_dssp EECSSSS-EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS---CEEECCCC
T ss_pred EEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---ceeEEEcC
Confidence 5666664 5678999999999975 4567889999999999999999999999999999999998642 22234678
Q ss_pred ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCc
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDL 155 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~ 155 (264)
|...|.+++|+|++ +++++++.|++|++||++++.. ...+++++.|+.|++|++....
T Consensus 191 h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-- 267 (410)
T 1vyh_C 191 HDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-- 267 (410)
T ss_dssp CSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--
T ss_pred CCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--
Confidence 99999999999955 7889999999999999987642 1257899999999999986532
Q ss_pred cceEEEeccccceeeEEEcCCC-------------------CCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEE
Q psy9316 156 NKEVVYRGHTGSVDQLCWHATN-------------------PDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITW 214 (264)
Q Consensus 156 ~~~~~~~~h~~~i~~i~~~~~~-------------------~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~ 214 (264)
....+.+|...|.+++|+|.. +.++++|+.||.|++||++++.... ..+...+.+++|
T Consensus 268 -~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 268 -CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp -EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 223567899999999999853 4589999999999999999887532 234567889999
Q ss_pred cCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 215 APNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 215 sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+|+|++|++|+.|+.|++||+..+. ...++.+|...+.+|
T Consensus 347 ~~~g~~l~s~s~D~~i~vwd~~~~~----~~~~~~~h~~~v~~l 386 (410)
T 1vyh_C 347 HSGGKFILSCADDKTLRVWDYKNKR----CMKTLNAHEHFVTSL 386 (410)
T ss_dssp CSSSSCEEEEETTTEEEEECCTTSC----CCEEEECCSSCEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEE
Confidence 9999999999999999999986543 334677888877765
No 3
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.9e-31 Score=224.94 Aligned_cols=221 Identities=23% Similarity=0.368 Sum_probs=176.8
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc----ccccccccCCCCEEEEEECCC--CCeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~h~~~V~~l~~s~~--g~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
...+.|.+. .+++++.|+.+++|+.. +.+.++.+|.+.|.+++|+|+ +++|++|+.|++|++|++.. +....
T Consensus 14 ~~~~s~~g~-~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~-~~~~~ 91 (297)
T 2pm7_B 14 DAVMDYYGK-RMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN-GRWSQ 91 (297)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS-SCBCC
T ss_pred EEEECCCCC-EEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC-CceEE
Confidence 346667665 56789999999999753 456788999999999999864 89999999999999999864 22233
Q ss_pred cEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc----------------------------------ce
Q psy9316 89 EVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS----------------------------------QI 133 (264)
Q Consensus 89 ~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~----------------------------------~~ 133 (264)
...+..|...|.+++|+|+. +.++++++.|+.|++||++.... ..
T Consensus 92 ~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~ 171 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 171 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CC
T ss_pred EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcc
Confidence 34567899999999999863 57899999999999999976421 12
Q ss_pred EEEeecCCCcEEEEEeccCCCcc-ceEEEeccccceeeEEEcCCC--CCEEEEEeCCCcEEEEeCCCCcc--e--e---E
Q psy9316 134 MLASGSFDKSVAIFALDKKGDLN-KEVVYRGHTGSVDQLCWHATN--PDLLSTASGDKTVRIWDARTQKS--Q--I---I 203 (264)
Q Consensus 134 ~~~~~~~d~~i~i~~~~~~~~~~-~~~~~~~h~~~i~~i~~~~~~--~~~i~s~~~dg~i~iwD~~t~~~--~--~---~ 203 (264)
.+++|+.|+.|++|+++...... ....+.+|...|.+++|+|+. +.+|++++.|++|+|||+++... . . .
T Consensus 172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~ 251 (297)
T 2pm7_B 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE 251 (297)
T ss_dssp EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS
T ss_pred eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecc
Confidence 68899999999999987543221 233577899999999999974 57899999999999999987431 1 1 1
Q ss_pred eecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 204 ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 204 ~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.+...+.+++|+|+|++||+++.|+.|++|++..
T Consensus 252 ~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 2345688999999999999999999999999763
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.9e-31 Score=225.37 Aligned_cols=210 Identities=18% Similarity=0.330 Sum_probs=158.3
Q ss_pred ecCCCCCce--EeecCCCeeEEEeecCceEEecccc-------ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEE
Q psy9316 8 FHTPKSPEY--KLLPSGSQFHLVCKIDDYVKHFNTH-------NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF 78 (264)
Q Consensus 8 ~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~-------~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~ 78 (264)
|.++..+-. .+.|.+..++++++.|+.+++|+.. ..++.+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 444444333 5566666678899999999999753 2356789999999999999999999999999999999
Q ss_pred EeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------------ceE
Q psy9316 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------------QIM 134 (264)
Q Consensus 79 ~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------------~~~ 134 (264)
|+... .....+.+|...|.+++|+|++ .++++++.|++|++||++.... ...
T Consensus 93 d~~~~---~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 93 DVATG---ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp ETTTT---EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred ECCCC---CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 98642 2234577999999999999854 7899999999999999875321 115
Q ss_pred EEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-EeecCceEEEE
Q psy9316 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-IATKGENINIT 213 (264)
Q Consensus 135 ~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~~~~~~~~~v~ 213 (264)
+++++.|+.|++|+++.. .....+.+|...|.+++|+|+ +.+|++++.||.|++||+++++... ......+.+++
T Consensus 169 l~s~~~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp~-g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 244 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQF---QIEADFIGHNSNINTLTASPD-GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLA 244 (319)
T ss_dssp EEEEETTSCEEEEETTTT---EEEEEECCCCSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEE
T ss_pred EEEEeCCCEEEEEECCcc---hhheeecCCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEE
Confidence 788999999999998642 223456789999999999985 5799999999999999998875322 11223344444
Q ss_pred EcCCCCEEEEee
Q psy9316 214 WAPNGNTIAVGN 225 (264)
Q Consensus 214 ~sp~g~~la~gs 225 (264)
|+|++.+|++++
T Consensus 245 ~sp~~~~la~~~ 256 (319)
T 3frx_A 245 FSPNRYWLAAAT 256 (319)
T ss_dssp ECSSSSEEEEEE
T ss_pred EcCCCCEEEEEc
Confidence 444444444443
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4e-31 Score=230.14 Aligned_cols=217 Identities=17% Similarity=0.261 Sum_probs=173.5
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc--cc--c--ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN--DI--K--EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLN 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~--~--~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~ 87 (264)
....+.|.+ . .++++.|+.|++|+..+ .. . ...+|.+.|.+++|+|++++|++|+.|+.|++||+... .
T Consensus 98 ~~~~~s~d~-~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~---~ 172 (357)
T 4g56_B 98 TDVAWVSEK-G-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK---A 172 (357)
T ss_dssp EEEEEETTT-E-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT---E
T ss_pred EEEEEcCCC-C-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---c
Confidence 344666655 3 45788899999997532 21 1 23479999999999999999999999999999998642 2
Q ss_pred ccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------ceEEEeecCCCcEE
Q psy9316 88 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------QIMLASGSFDKSVA 145 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~~~~~~~~~d~~i~ 145 (264)
....+.+|...|.+++|++.+..++++++.||.|++||+++++. ..++++|+.|+.|+
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~ 252 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVS 252 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccccee
Confidence 33457789999999999998777899999999999999986531 12578899999999
Q ss_pred EEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce-eEeecCceEEEEEcC-CCCEEEE
Q psy9316 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-IIATKGENINITWAP-NGNTIAV 223 (264)
Q Consensus 146 i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~-~~~~~~~~~~v~~sp-~g~~la~ 223 (264)
+|+++... ....+.+|...|.+++|+|++..+|++++.||+|+|||+++++.. ...+.+.+.+++|+| ++++|++
T Consensus 253 ~wd~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 253 LVNIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp EEESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred EEECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEE
Confidence 99986532 234577899999999999987788999999999999999988753 334567799999999 8999999
Q ss_pred eeCCCeEEEEEcccC
Q psy9316 224 GNKEDLVTFIDVVKS 238 (264)
Q Consensus 224 gs~d~~i~~~d~~~~ 238 (264)
|+.|+.|++||+...
T Consensus 330 ~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 330 VGWDHKVLHHHLPSE 344 (357)
T ss_dssp EETTSCEEEEECC--
T ss_pred EcCCCeEEEEECCCC
Confidence 999999999998653
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-31 Score=224.60 Aligned_cols=233 Identities=18% Similarity=0.263 Sum_probs=183.7
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
....+.|.+. ++++++.|+.+++|+.. ..++.+..|..+|.+++|+|++++|++|+.|++|++||+.... ....
T Consensus 17 ~~~~fsp~~~-~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~---~~~~ 92 (304)
T 2ynn_A 17 KGIDFHPTEP-WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE---KVVD 92 (304)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC---EEEE
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc---EEEE
Confidence 4446777774 56788999999999764 4577888999999999999999999999999999999986532 2345
Q ss_pred EecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEEEeecCCCcEEEEEec
Q psy9316 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIMLASGSFDKSVAIFALD 150 (264)
Q Consensus 92 ~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~~~~ 150 (264)
+.+|...|.+++|+|++ .++++|+.||+|++||++++.. ...+++|+.|+.|++|+++
T Consensus 93 ~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp EECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred EeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 78999999999999965 6889999999999999876421 1358899999999999986
Q ss_pred cCCCccceEEEeccccceeeEEEcCC-CCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCC
Q psy9316 151 KKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKE 227 (264)
Q Consensus 151 ~~~~~~~~~~~~~h~~~i~~i~~~~~-~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d 227 (264)
..... ......|...+..+.|+|. ++.+|++++.||+|++||+++++... ..+...+..++|+|++++|++|+.|
T Consensus 172 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 172 QSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp CSSCS--EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCcc--ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCC
Confidence 54322 1223456678999999874 45689999999999999999987532 3345678899999999999999999
Q ss_pred CeEEEEEcccCCCCCCCcccCcccceeeee
Q psy9316 228 DLVTFIDVVKSLPPRERTLTSRGHLMETRS 257 (264)
Q Consensus 228 ~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~ 257 (264)
+.|++||+++... ..++.+|...+.+
T Consensus 250 g~i~iWd~~~~~~----~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 250 GTLKIWNSSTYKV----EKTLNVGLERSWC 275 (304)
T ss_dssp SCEEEEETTTCCE----EEEECCSSSSEEE
T ss_pred CeEEEEECCCCce----eeeccCCCccEEE
Confidence 9999999875332 2344455444433
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.1e-32 Score=237.41 Aligned_cols=241 Identities=21% Similarity=0.313 Sum_probs=188.6
Q ss_pred CceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCC----CCc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG----DLN 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~----~~~ 87 (264)
....+.|.+. ++++++.|+.+++|+. ......+.+|...|.+++|+|++++|++|+.|+.+++|++.... ...
T Consensus 70 ~~~~~sp~~~-~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~ 148 (380)
T 3iz6_a 70 YSLDWTPEKN-WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMP 148 (380)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSST
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcc
Confidence 4446777664 5678999999999975 45677888999999999999999999999999999999986421 122
Q ss_pred ccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------------ceEEEeecCCC
Q psy9316 88 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------------QIMLASGSFDK 142 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------------~~~~~~~~~d~ 142 (264)
....+.+|.+.|.++.|.|.++..+++|+.|++|++||+++++. ..++++|+.|+
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~ 228 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT 228 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence 22346789999999999998777899999999999999976431 23678999999
Q ss_pred cEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee--c-------CceEEEE
Q psy9316 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--K-------GENINIT 213 (264)
Q Consensus 143 ~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~--~-------~~~~~v~ 213 (264)
.|++||++.... ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++....... . ..+.+++
T Consensus 229 ~v~~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 229 TVRLWDLRITSR--AVRTYHGHEGDINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp CEEEEETTTTCC--CCEEECCCSSCCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred eEEEEECCCCCc--ceEEECCcCCCeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 999999874432 23457889999999999985 5789999999999999999876432211 1 1267899
Q ss_pred EcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 214 WAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 214 ~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|+|+|++|++|+.|+.|++||+..+....+-.....+|...+.+|
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 999999999999999999999865433221111235777777665
No 8
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.5e-31 Score=227.43 Aligned_cols=222 Identities=23% Similarity=0.401 Sum_probs=177.0
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc----cccccccCCCCEEEEEECC--CCCeEEEEECCCcEEEEEeccCCCCc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN----DIKEYQAHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKGDLN 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~--~g~~l~s~s~dg~i~v~~~~~~~~~~ 87 (264)
....+.|.+. .+++++.|+.+++|+... .+..+.+|.+.|.+++|+| ++++|++|+.|++|++|++.. +...
T Consensus 17 ~~v~~s~~g~-~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~-~~~~ 94 (316)
T 3bg1_A 17 HDAQMDYYGT-RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTWE 94 (316)
T ss_dssp EEEEECGGGC-EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS-SCCC
T ss_pred EEeeEcCCCC-EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC-Ccce
Confidence 4446667664 567899999999998643 3567889999999999986 489999999999999999864 2223
Q ss_pred ccEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc-----------------------------------
Q psy9316 88 KEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS----------------------------------- 131 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~----------------------------------- 131 (264)
....+.+|...|.+++|+|++ +.+|++++.|+.|++||++....
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 334567899999999999963 57899999999999999875310
Q ss_pred ----ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC---CCEEEEEeCCCcEEEEeCCCCc-----
Q psy9316 132 ----QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN---PDLLSTASGDKTVRIWDARTQK----- 199 (264)
Q Consensus 132 ----~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~---~~~i~s~~~dg~i~iwD~~t~~----- 199 (264)
...+++|+.|+.|++|+++..........+.+|...|.+++|+|+. ..+|++++.||+|++||+++..
T Consensus 175 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS 254 (316)
T ss_dssp CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB
T ss_pred CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh
Confidence 1358899999999999986443323334567899999999999964 3689999999999999998621
Q ss_pred -ceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 200 -SQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 200 -~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.....+...+.+++|+|+|++||+|+.|+.|++|+...
T Consensus 255 ~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 255 PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 12233466789999999999999999999999999753
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=231.54 Aligned_cols=202 Identities=15% Similarity=0.207 Sum_probs=157.7
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcc-cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECC
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~-~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~ 127 (264)
.|.+.|.+++|+|++ +|++|+.||+|++||+........ .....+|...|.+++|+|++ ++|++|+.||+|++||++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECC
Confidence 466789999999985 678999999999999976443221 12345899999999999955 789999999999999998
Q ss_pred CCCc--------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC
Q psy9316 128 TQKS--------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187 (264)
Q Consensus 128 ~~~~--------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d 187 (264)
+++. ..++++++.|+.|++||++....... .....|...+.+++|+|.+..++++|+.|
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQ-IGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEE-CC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeee-eecceeeccceeeeecCCCCcceEEeccC
Confidence 7542 12578899999999999876543221 11234555789999999888899999999
Q ss_pred CcEEEEeCCCCcce--eEeecCceEEEEEcCCC-CEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 188 KTVRIWDARTQKSQ--IIATKGENINITWAPNG-NTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 188 g~i~iwD~~t~~~~--~~~~~~~~~~v~~sp~g-~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|.|++||+++++.. +..+...+.+++|+|+| ++|++|+.|+.|++||++.+. ..+.+||...|++|
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-----~~~~~~H~~~V~~v 305 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-----LFRSQAHRDFVRDA 305 (344)
T ss_dssp SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-----EEEECCCSSCEEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-----EEEEcCCCCCEEEE
Confidence 99999999988753 33456678999999998 589999999999999987543 23578999988887
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=8.1e-30 Score=220.06 Aligned_cols=231 Identities=20% Similarity=0.353 Sum_probs=185.2
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC-CcccEEEe
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD-LNKEVVYR 93 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~-~~~~~~~~ 93 (264)
.+.|.+ .++++++.|+.+++|+. .+.+..+..|.+.|.+++|+|++++|++|+.|+.|++|++..... ......+.
T Consensus 62 ~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 62 HWGTDS-RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp EECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE
T ss_pred EECCCC-CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec
Confidence 555555 46678999999999975 456677889999999999999999999999999999999865321 22234467
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCC
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGD 154 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~ 154 (264)
+|...|.++.|.+.+ .+++++.|++|++||+++++. ...+++|+.|+.|++|+++...
T Consensus 141 ~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~- 217 (340)
T 1got_B 141 GHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM- 217 (340)
T ss_dssp CCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred CCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-
Confidence 899999999998744 588999999999999987532 1257899999999999986532
Q ss_pred ccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-ec---CceEEEEEcCCCCEEEEeeCCCeE
Q psy9316 155 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-TK---GENINITWAPNGNTIAVGNKEDLV 230 (264)
Q Consensus 155 ~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~~---~~~~~v~~sp~g~~la~gs~d~~i 230 (264)
....+.+|...|.+++|+|+ +.+|++++.||+|++||+++.+..... +. ..+.+++|+|+|++|++|+.|+.|
T Consensus 218 --~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i 294 (340)
T 1got_B 218 --CRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC 294 (340)
T ss_dssp --EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred --eEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeE
Confidence 23457789999999999985 578999999999999999987643322 22 247889999999999999999999
Q ss_pred EEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 231 TFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 231 ~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
++||+..+. ...++.||...+.+|
T Consensus 295 ~vwd~~~~~----~~~~~~~h~~~v~~~ 318 (340)
T 1got_B 295 NVWDALKAD----RAGVLAGHDNRVSCL 318 (340)
T ss_dssp EEEETTTCC----EEEEEECCSSCEEEE
T ss_pred EEEEcccCc----EeeEeecCCCcEEEE
Confidence 999986532 344677898888776
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=9.9e-30 Score=220.05 Aligned_cols=238 Identities=25% Similarity=0.444 Sum_probs=182.3
Q ss_pred eEeecCCCeeEEEeecCceEEecccccc-----ccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHND-----IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~ 90 (264)
..+.|.+. ++++++.|+.+++|+.... .....+|.+.|.+++|+|++++|++|+.|+++++|++... ......
T Consensus 22 l~~sp~g~-~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~-~~~~~~ 99 (345)
T 3fm0_A 22 LAWNPAGT-LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVT 99 (345)
T ss_dssp EEECTTSS-CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--EEEEE
T ss_pred EEECCCCC-EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC-CeEEEE
Confidence 46777764 5678999999999976432 1223689999999999999999999999999999998642 223334
Q ss_pred EEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------ceEEEeecCCCcEEEEE
Q psy9316 91 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------QIMLASGSFDKSVAIFA 148 (264)
Q Consensus 91 ~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~~~~~~~~~d~~i~i~~ 148 (264)
.+.+|...|.+++|+|++ ++|++++.|+.|++||++.... ...+++++.|+.|++|+
T Consensus 100 ~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred EccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 578999999999999954 7899999999999999976421 12478899999999999
Q ss_pred eccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-------------e-eE----eecCceE
Q psy9316 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------Q-II----ATKGENI 210 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~-------------~-~~----~~~~~~~ 210 (264)
.+... ......+.+|...|.+++|+|+ +.+|++++.||+|++||...... . .. .+...+.
T Consensus 179 ~~~~~-~~~~~~~~~h~~~v~~l~~sp~-g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 256 (345)
T 3fm0_A 179 EEEDD-WVCCATLEGHESTVWSLAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIY 256 (345)
T ss_dssp EETTE-EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEE
T ss_pred ecCCC-EEEEEEecCCCCceEEEEECCC-CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEE
Confidence 86432 1223456789999999999985 57899999999999999743210 0 00 1334578
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcc-----cCcccceeeeee
Q psy9316 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL-----TSRGHLMETRSL 258 (264)
Q Consensus 211 ~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~-----~~~~h~~~~~~~ 258 (264)
+++|+|++..|++++.|+.|++|++.......+... ...||...+.+|
T Consensus 257 ~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 999999999999999999999999876543332221 235888888776
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=7.5e-30 Score=225.94 Aligned_cols=215 Identities=21% Similarity=0.349 Sum_probs=177.0
Q ss_pred CCceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE
Q psy9316 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~ 90 (264)
.....+.|.+. ++++|+.|+.+++|+. .+.++++.+|.+.|.+++|+|++++|++|+.|++|++||+.... ...
T Consensus 153 V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~---~~~ 228 (410)
T 1vyh_C 153 VQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVK 228 (410)
T ss_dssp EEEEEECTTSS-EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEE
T ss_pred EEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEE
Confidence 34446667664 6678999999999965 45678889999999999999999999999999999999986522 234
Q ss_pred EEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------------------------
Q psy9316 91 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--------------------------------------- 131 (264)
Q Consensus 91 ~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------------------------- 131 (264)
.+.+|...|.++.|+|++ .++++++.|+.|++||+++++.
T Consensus 229 ~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (410)
T 1vyh_C 229 TFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP 307 (410)
T ss_dssp EEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------
T ss_pred EEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCC
Confidence 577999999999999854 7899999999999999976531
Q ss_pred ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc--eeEeecCce
Q psy9316 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGEN 209 (264)
Q Consensus 132 ~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~--~~~~~~~~~ 209 (264)
...+++|+.|+.|++|+++... ....+.+|...|.+++|+|. +.+|++++.||.|++||+++++. ....+...+
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~-g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v 383 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 383 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE
Confidence 1258889999999999986532 23456789999999999985 56788999999999999988764 233456679
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 210 INITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 210 ~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.+++|+|++.+|++|+.|+.|++||++
T Consensus 384 ~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 384 TSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999864
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=7.1e-30 Score=217.10 Aligned_cols=206 Identities=14% Similarity=0.224 Sum_probs=167.6
Q ss_pred cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 122 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~ 122 (264)
..++|.+|.+.|.+++|+|++++|++|+.||+|++||+... .....+..|...|.+++|+|++ +++++|+.|++|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~---~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ---VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIR 80 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEE
Confidence 34678899999999999999999999999999999998642 2234577899999999999855 7899999999999
Q ss_pred EEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE
Q psy9316 123 IWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183 (264)
Q Consensus 123 vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s 183 (264)
+||+++++.. ..+++|+.|+.|++|+++.... ....+.+|...|.+++|+|.++.+|++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 9999876421 2578999999999999865422 234567899999999999977889999
Q ss_pred EeCCCcEEEEeCCCCcceeEee---cCceEEEEEcC--CCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 184 ASGDKTVRIWDARTQKSQIIAT---KGENINITWAP--NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 184 ~~~dg~i~iwD~~t~~~~~~~~---~~~~~~v~~sp--~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|+.||+|++||+++........ ...+..++|+| ++++|++|+.|+.|++||++.+. ...++.||...+.++
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----~~~~~~~h~~~v~~~ 234 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS----CVATLEGHMSNVSFA 234 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEE
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc----cceeeCCCCCCEEEE
Confidence 9999999999998776433322 24567788876 78899999999999999987543 345677888877765
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=217.96 Aligned_cols=224 Identities=21% Similarity=0.232 Sum_probs=180.9
Q ss_pred CeeEEEeecCceEEeccccc----cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEeccccc
Q psy9316 23 SQFHLVCKIDDYVKHFNTHN----DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 98 (264)
Q Consensus 23 ~~~~~~~~~d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~ 98 (264)
+..+++++.|+.+++|+... ....+.+|...|.+++|++++.++++++.|++|++||+... .....+..|...
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~---~~~~~~~~~~~~ 124 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---KQIKSIDAGPVD 124 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCTTC
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---CEEEEEeCCCcc
Confidence 34677899999999997532 23467899999999999999999999999999999998642 223446678888
Q ss_pred EEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceE
Q psy9316 99 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEV 159 (264)
Q Consensus 99 v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~ 159 (264)
+.+++|+|++ .++++++.||.+++||+++++.. ..+++++.|+.|.+|+++... ...
T Consensus 125 ~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---~~~ 200 (321)
T 3ow8_A 125 AWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---LLH 200 (321)
T ss_dssp CCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEE
T ss_pred EEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---EEE
Confidence 9999999955 78999999999999999875421 257889999999999986532 233
Q ss_pred EEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 160 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 160 ~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.+.+|..+|.+++|+|+ +.+|++++.||.|++||+++..... ..+...+.+++|+|++++|++|+.|+.|++||+..
T Consensus 201 ~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EECCCSSCCCEEEECTT-SCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcccCCceeEEEEcCC-CCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 56789999999999985 5789999999999999999876532 23456689999999999999999999999999875
Q ss_pred CCCCCCCcccCcccceeeeee
Q psy9316 238 SLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 238 ~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+. ...++.+|...+.+|
T Consensus 280 ~~----~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 280 RT----CVHTFFDHQDQVWGV 296 (321)
T ss_dssp TE----EEEEECCCSSCEEEE
T ss_pred CE----EEEEEcCCCCcEEEE
Confidence 43 334567787777665
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=5.3e-29 Score=215.09 Aligned_cols=210 Identities=18% Similarity=0.293 Sum_probs=167.4
Q ss_pred cCCCeeEEEeecCceEEecccc---------ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE
Q psy9316 20 PSGSQFHLVCKIDDYVKHFNTH---------NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 20 ~~~~~~~~~~~~d~~~~~~~~~---------~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~ 90 (264)
+.++.++++++.|+.+++|+.. ...+.+.+|...|.+++|+|++.+|++|+.|++|++||+.... ...
T Consensus 36 ~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~---~~~ 112 (343)
T 2xzm_R 36 NEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT---TYK 112 (343)
T ss_dssp TCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC---EEE
T ss_pred CCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---EEE
Confidence 4355677899999999999753 2345688999999999999999999999999999999986532 234
Q ss_pred EEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------------------ceEEEeec
Q psy9316 91 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------------------QIMLASGS 139 (264)
Q Consensus 91 ~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------------------~~~~~~~~ 139 (264)
.+.+|...|.+++|+|++ .++++++.|+.|++||+..... ...+++++
T Consensus 113 ~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 113 RFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 577899999999999955 6889999999999999853210 03688999
Q ss_pred CCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc-cee-EeecCceEEEEEcCC
Q psy9316 140 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQI-IATKGENINITWAPN 217 (264)
Q Consensus 140 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~-~~~-~~~~~~~~~v~~sp~ 217 (264)
.|+.|++|+.+ ......+.+|...|.+++|+|+ +.+|++++.||.|++||+.+.. ... ......+.+++|+|+
T Consensus 192 ~d~~i~iwd~~----~~~~~~~~~h~~~v~~~~~s~~-g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 192 WDGRLKVWNTN----FQIRYTFKAHESNVNHLSISPN-GKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPK 266 (343)
T ss_dssp TTSEEEEEETT----TEEEEEEECCSSCEEEEEECTT-SSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSS
T ss_pred CCCEEEEEcCC----CceeEEEcCccccceEEEECCC-CCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCC
Confidence 99999999932 1233456789999999999985 5789999999999999995443 222 223456889999999
Q ss_pred CCEEEEeeCCCeEEEEEcccCC
Q psy9316 218 GNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 218 g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+.++++|+ |+.+++||+....
T Consensus 267 ~~~la~~~-d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 267 LQWVAVGT-DQGVKIFNLMTQS 287 (343)
T ss_dssp SCEEEEEE-SSCEEEEESSSCC
T ss_pred CCEEEEEC-CCCEEEEEeCCCC
Confidence 99988665 7789999987643
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=8.6e-31 Score=228.02 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=172.2
Q ss_pred CCceEeecCCCeeEEEeecCceEEeccccc------cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC
Q psy9316 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHN------DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86 (264)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~ 86 (264)
|||++++++++.. .+..||+.++.|+... ......+|.+.|.+++|+|++++ ++++.||+|++||+......
T Consensus 51 SpDG~~las~s~d-~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~ 128 (357)
T 4g56_B 51 RRDGALLLAASSL-SSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESL 128 (357)
T ss_dssp CSSSCEEEEEECS-SSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------
T ss_pred CCCCCEEEEEcCC-CCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeecccccee
Confidence 4555555444321 1123688898887533 22334578999999999999765 56789999999998754322
Q ss_pred -cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc--------------------eEEEeecCCCcEE
Q psy9316 87 -NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ--------------------IMLASGSFDKSVA 145 (264)
Q Consensus 87 -~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~--------------------~~~~~~~~d~~i~ 145 (264)
.......+|...|.+++|+|++ .+|++++.||.|++||+++++.. ..+++++.|+.|+
T Consensus 129 ~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 129 LVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred EEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 1223345899999999999955 78999999999999999875421 2467888999999
Q ss_pred EEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCC-CEEE
Q psy9316 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNG-NTIA 222 (264)
Q Consensus 146 i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g-~~la 222 (264)
+|+++...... ...+..|...+.+++|+|.++.+|++|+.|+.|++||+++.+... ..+...+.+++|+|++ ++||
T Consensus 208 ~wd~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 208 LWDTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp ECCTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEE
T ss_pred EEECCCCceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEE
Confidence 99987544322 123345677899999999888899999999999999999887532 2345678999999987 5899
Q ss_pred EeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 223 VGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 223 ~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+|+.|+.|++||++.+.. ....+|...|++|
T Consensus 287 sgs~D~~i~iwd~~~~~~-----~~~~~H~~~V~~v 317 (357)
T 4g56_B 287 SISEDCTVAVLDADFSEV-----FRDLSHRDFVTGV 317 (357)
T ss_dssp EEETTSCEEEECTTSCEE-----EEECCCSSCEEEE
T ss_pred EEeCCCEEEEEECCCCcE-----eEECCCCCCEEEE
Confidence 999999999999876433 2346888888876
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=6e-29 Score=216.04 Aligned_cols=235 Identities=19% Similarity=0.271 Sum_probs=187.1
Q ss_pred CceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC---Ccc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD---LNK 88 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~---~~~ 88 (264)
.-..+.|.+. .+++++.|+.+++|+. .+..+.+..|...|.+++|+|++++|++|+.|+.+++|++..... ...
T Consensus 68 ~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~ 146 (354)
T 2pbi_B 68 LCMDWCKDKR-RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAK 146 (354)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGG
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccccc
Confidence 3346667664 5678999999999975 455667788999999999999999999999999999999864321 122
Q ss_pred cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEEEeecCCCcEEEE
Q psy9316 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIMLASGSFDKSVAIF 147 (264)
Q Consensus 89 ~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~ 147 (264)
...+..|...|.+++|+|++ ..+++++.|++|++||+++++. ...+++|+.|+.|.+|
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp CEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred ceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 34567899999999999855 6888999999999999987542 1267889999999999
Q ss_pred EeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee-c---CceEEEEEcCCCCEEEE
Q psy9316 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-K---GENINITWAPNGNTIAV 223 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~-~---~~~~~v~~sp~g~~la~ 223 (264)
+++.... ...+.+|...|.+++|+|+ +.+|++++.|++|++||+++........ . ..+.+++|+|+|++|++
T Consensus 226 d~~~~~~---~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 226 DMRSGQC---VQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp ETTTCCE---EEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCcE---EEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 9875432 3356789999999999985 5789999999999999999876432222 1 24678999999999999
Q ss_pred eeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 224 GNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 224 gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|+.|+.|++||+.++. ...++.||...+.+|
T Consensus 302 g~~d~~i~vwd~~~~~----~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGS----RVSILFGHENRVSTL 332 (354)
T ss_dssp EETTSCEEEEETTTCS----EEEEECCCSSCEEEE
T ss_pred EECCCcEEEEECCCCc----eEEEEECCCCcEEEE
Confidence 9999999999986543 334577888887765
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=8.4e-29 Score=212.44 Aligned_cols=211 Identities=18% Similarity=0.289 Sum_probs=174.2
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
.+.|.+ ...++++.|+.+++|+. .+.++.+..|...+.+++|+|++++|++|+.|+.|++|++.... ....+..
T Consensus 87 ~~~~~~-~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~---~~~~~~~ 162 (321)
T 3ow8_A 87 DISHTL-PIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK---KEYSLDT 162 (321)
T ss_dssp EECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS---EEEEEEC
T ss_pred EECCCC-CEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc---eeEEecC
Confidence 344444 35678999999999975 45677788899999999999999999999999999999986432 2345677
Q ss_pred ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCc
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDL 155 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~ 155 (264)
|...|.+++|+|++ .++++++.||.|++||+++++. ...+++++.|+.|++|+++...
T Consensus 163 ~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-- 239 (321)
T 3ow8_A 163 RGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-- 239 (321)
T ss_dssp SSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC--
T ss_pred CCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc--
Confidence 88899999999955 7899999999999999987542 1257899999999999986532
Q ss_pred cceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEE
Q psy9316 156 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFI 233 (264)
Q Consensus 156 ~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~ 233 (264)
....+.+|...|.+++|+|+ +.+|++++.||+|++||+++++.... .+.+.+.+++|+|+|++|++++.|+.|++|
T Consensus 240 -~~~~~~~h~~~v~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 240 -LAGTLSGHASWVLNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp -EEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred -eeEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 23456789999999999985 56899999999999999998875332 345678999999999999999999999999
Q ss_pred Ecc
Q psy9316 234 DVV 236 (264)
Q Consensus 234 d~~ 236 (264)
|+.
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 963
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=8.5e-29 Score=209.76 Aligned_cols=192 Identities=20% Similarity=0.351 Sum_probs=155.8
Q ss_pred cccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecC-CCCeEEEEeCCCcEEE
Q psy9316 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVRI 123 (264)
Q Consensus 45 ~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~-~~~~l~s~s~dg~i~v 123 (264)
..+.+|.+.|.+++|+|+|++|++|+.|++|++|++... .......+.+|.+.|.+++|++. ++.+|++++.||+|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 356799999999999999999999999999999998642 22233567899999999999753 4579999999999999
Q ss_pred EECCCCCc-----------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC---
Q psy9316 124 WDARTQKS-----------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN--- 177 (264)
Q Consensus 124 wd~~~~~~-----------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~--- 177 (264)
||+++++. ...+++++.|+.|++|+++...... ...+.+|...|.+++|+|..
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC---
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCcccc
Confidence 99976420 1357889999999999987543221 24567899999999999863
Q ss_pred ---------CCEEEEEeCCCcEEEEeCCCCcc------eeEeecCceEEEEEcCCC---CEEEEeeCCCeEEEEEcccC
Q psy9316 178 ---------PDLLSTASGDKTVRIWDARTQKS------QIIATKGENINITWAPNG---NTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 178 ---------~~~i~s~~~dg~i~iwD~~t~~~------~~~~~~~~~~~v~~sp~g---~~la~gs~d~~i~~~d~~~~ 238 (264)
+.+|++++.|++|++||+++... .+..+...+.+++|+|++ ++||+|+.|+.|++||++..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 46899999999999999987652 112245668999999985 89999999999999998763
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=4.2e-29 Score=216.11 Aligned_cols=193 Identities=25% Similarity=0.405 Sum_probs=156.6
Q ss_pred cccccccCCC-CEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 43 DIKEYQAHGS-KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 43 ~~~~~~~h~~-~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
.+.++.+|.+ .|.+++|+|+|++|++|+.|++|++|++.............+|...|.+++|+|++ .+|++++.|+.+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v 85 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATT 85 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcE
Confidence 4567789987 99999999999999999999999999986432111112236899999999999954 789999999999
Q ss_pred EEEECCCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCE
Q psy9316 122 RIWDARTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180 (264)
Q Consensus 122 ~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~ 180 (264)
++||++.... ...+++++.|+.|.+|+++..........+.+|...|.+++|+|+ +.+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~ 164 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS-QEL 164 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS-SSC
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC-CCE
Confidence 9999876421 125789999999999999765444334456789999999999985 468
Q ss_pred EEEEeCCCcEEEEeCCCCcce----eEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 181 LSTASGDKTVRIWDARTQKSQ----IIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t~~~~----~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
|++++.|+.|++||.++.... ...+...+.+++|+|+|++|++|+.|+.|++||...
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 899999999999999876522 223456789999999999999999999999999754
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-29 Score=212.92 Aligned_cols=219 Identities=25% Similarity=0.404 Sum_probs=161.9
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc---------ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH---------NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD 85 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~---------~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~ 85 (264)
...+.|.+. ++++++.|+.+++|+.. +.+..+.+|.+.|.+++|+|++++|++|+.|++|++|++...+.
T Consensus 63 ~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~ 141 (330)
T 2hes_X 63 SVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE 141 (330)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC
T ss_pred EEEECCCCC-EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC
Confidence 346677664 56789999999999752 34566889999999999999999999999999999999853322
Q ss_pred -CcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC--c---------------------ceEEEeecCC
Q psy9316 86 -LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--S---------------------QIMLASGSFD 141 (264)
Q Consensus 86 -~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~--~---------------------~~~~~~~~~d 141 (264)
......+.+|...|.+++|+|++ .+|++++.|++|++||.+.+. . ...+++++.|
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred CeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 22334577899999999999954 789999999999999976431 0 2257899999
Q ss_pred CcEEEEEeccCCCc-----cceEEEec-cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--E---eecC-ce
Q psy9316 142 KSVAIFALDKKGDL-----NKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--I---ATKG-EN 209 (264)
Q Consensus 142 ~~i~i~~~~~~~~~-----~~~~~~~~-h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~---~~~~-~~ 209 (264)
+.|++|+++..... .....+.. |...|.+++|++. .+|++++.||.|++||..+++... . .+.. .+
T Consensus 221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v 298 (330)
T 2hes_X 221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEI 298 (330)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCE
T ss_pred CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceE
Confidence 99999998643211 11112333 8889999999853 478999999999999998764211 1 1233 67
Q ss_pred EEEEEcC--CCCEEEEeeCCCeEEEEEccc
Q psy9316 210 INITWAP--NGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 210 ~~v~~sp--~g~~la~gs~d~~i~~~d~~~ 237 (264)
.+++|+| ++++|++|+.|+.|++||+.+
T Consensus 299 ~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 299 NVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 8899999 789999999999999999754
No 22
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.7e-28 Score=208.72 Aligned_cols=234 Identities=21% Similarity=0.333 Sum_probs=180.0
Q ss_pred ceEeecCCCCCceEeecCCCeeEEEeecCceEEecccc------ccccccccCCCCEEEEEECC--CCCeEEEEECCCcE
Q psy9316 4 PVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTH------NDIKEYQAHGSKVHSVAWSC--DGRRLASGSFDKSV 75 (264)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------~~~~~~~~h~~~V~~l~~s~--~g~~l~s~s~dg~i 75 (264)
+.+..|........+.|.+. ++++++.|+.+++|+.. .....+.+|.+.|.+++|+| ++++|++|+.||.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 34444544445567778765 56788999999999764 24566789999999999999 69999999999999
Q ss_pred EEEEeccCCCC------cccEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc-----------------
Q psy9316 76 AIFALDKKGDL------NKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS----------------- 131 (264)
Q Consensus 76 ~v~~~~~~~~~------~~~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~----------------- 131 (264)
++|++...... .....+..|...|.+++|+|.. +.++++++.||.|++||+++.+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999753211 2234567899999999999862 57899999999999999876541
Q ss_pred ------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCC---CEEEEEeCCCcE
Q psy9316 132 ------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP---DLLSTASGDKTV 190 (264)
Q Consensus 132 ------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~---~~i~s~~~dg~i 190 (264)
...+++++.++.+.+|+.. .+.......+.+|...|.+++|+|+++ .+|++++.||.|
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK-DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT-TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC-CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 3467788888888555543 333333445678999999999999753 689999999999
Q ss_pred EEEeCCCCcc---------------------------------------------eeE---eecCceEEEEEcCCCCEEE
Q psy9316 191 RIWDARTQKS---------------------------------------------QII---ATKGENINITWAPNGNTIA 222 (264)
Q Consensus 191 ~iwD~~t~~~---------------------------------------------~~~---~~~~~~~~v~~sp~g~~la 222 (264)
++||+++... ... .+...+.+++|+|++++|+
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 9999986420 111 1335688999999999999
Q ss_pred EeeCCCeEEEEEcccCC
Q psy9316 223 VGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 223 ~gs~d~~i~~~d~~~~~ 239 (264)
+|+.|+.|++||+..+.
T Consensus 323 s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEETTSCEEEEEECTTS
T ss_pred EecCCCcEEEEecCcCc
Confidence 99999999999987543
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-28 Score=210.80 Aligned_cols=228 Identities=27% Similarity=0.411 Sum_probs=166.5
Q ss_pred eecCCCCCceEeecCCCeeEEEeecCceEEeccccc----ccccc-cc-CCCCEEEEEECCCCCeEEEEECCCcEEEEEe
Q psy9316 7 QFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHN----DIKEY-QA-HGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~-~~-h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~ 80 (264)
.|.++..+-..+-.++. ++++++.|+.+++|+... .+..+ .+ |.+.|.+++|+|++++|++|+.|++|++|++
T Consensus 9 ~~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp EEECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eeccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 34444444444444444 667899999999997643 33444 34 9999999999999999999999999999998
Q ss_pred ccCC----CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCC-C----------------------cce
Q psy9316 81 DKKG----DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ-K----------------------SQI 133 (264)
Q Consensus 81 ~~~~----~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~-~----------------------~~~ 133 (264)
.... .......+.+|...|.+++|+|++ .+|++++.|++|++||++.. . ...
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 5321 122234577899999999999954 78999999999999999431 1 012
Q ss_pred EEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC-CCEEEEEeCCCcEEEEeCCCCc--------ceeE-
Q psy9316 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQK--------SQII- 203 (264)
Q Consensus 134 ~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~-~~~i~s~~~dg~i~iwD~~t~~--------~~~~- 203 (264)
.+++++.|+.|++|+..... ......+.+|...|.++.|+|+. ..+|++++.|++|++||+++.. ....
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 245 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL 245 (330)
T ss_dssp EEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeec
Confidence 57899999999999975421 12234567899999999999864 4579999999999999997542 1111
Q ss_pred --eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 204 --ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 204 --~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
.+...+.+++|+|++ +|++|+.|+.|++||+..+
T Consensus 246 ~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 246 PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 134568899999765 8899999999999998643
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.5e-29 Score=223.96 Aligned_cols=190 Identities=19% Similarity=0.271 Sum_probs=155.4
Q ss_pred ccccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 46 EYQAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
...+|...|+||+|+| ++++|++|+.||+|++||+..... .....+.+|.+.|.+++|+|.++++|++++.||+|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 3457888999999999 678999999999999999865332 22233568999999999999888899999999999999
Q ss_pred ECCCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE
Q psy9316 125 DARTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183 (264)
Q Consensus 125 d~~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s 183 (264)
|++++.. ...+++|+.|+.|.+|+++.. ....+.+|...|.+++|+|.+..++++
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK----ELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC----BCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc----eeEEEecccceEEeeeecCCCceEEEE
Confidence 9976421 125788999999999998532 122457899999999999988889999
Q ss_pred EeCCCcEEEEeCCCCccee-----EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 184 ASGDKTVRIWDARTQKSQI-----IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 184 ~~~dg~i~iwD~~t~~~~~-----~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
++.|+.|++||+++..... ..+...+.+++|+|+|++|++|+.|+.|++||++.+..
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 9999999999998765311 23456788999999999999999999999999886443
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.8e-28 Score=225.42 Aligned_cols=237 Identities=19% Similarity=0.314 Sum_probs=176.9
Q ss_pred ceEeecCCCeeEEEeecCceEEeccc--cccccccc-------cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQ-------AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD 85 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~-------~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~ 85 (264)
...+.|.+. ++++++.|+.+++|+. .+.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.....
T Consensus 195 ~v~fspdg~-~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 195 SVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEECCCCC-EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 446777664 5678999999999975 34455553 7999999999999999999999999999999864211
Q ss_pred Cc----------------------------------------ccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEE
Q psy9316 86 LN----------------------------------------KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125 (264)
Q Consensus 86 ~~----------------------------------------~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd 125 (264)
.. ....+.+|...|.+++|+|++ ++|++++.|++|++||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 274 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEE
T ss_pred eeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEE
Confidence 00 012345799999999999954 7899999999999999
Q ss_pred CCCCCc--------------------------------------------------------------------------
Q psy9316 126 ARTQKS-------------------------------------------------------------------------- 131 (264)
Q Consensus 126 ~~~~~~-------------------------------------------------------------------------- 131 (264)
+++++.
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 432 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 432 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence 865321
Q ss_pred ---------------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE
Q psy9316 132 ---------------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA 184 (264)
Q Consensus 132 ---------------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~ 184 (264)
...+++|+.|+.|++|++.... ...... .+|...|.+++|+|+ +.+|+++
T Consensus 433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~-~~~~~~-~~h~~~v~~v~fspd-g~~las~ 509 (611)
T 1nr0_A 433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS-VSEVKT-IVHPAEITSVAFSNN-GAFLVAT 509 (611)
T ss_dssp EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE-EEEEEE-EECSSCEEEEEECTT-SSEEEEE
T ss_pred eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc-eeeeec-cCCCCceEEEEECCC-CCEEEEE
Confidence 0135667777888888875321 111122 578899999999985 5789999
Q ss_pred eCCCcEEEEeCCC-Cccee---E-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCccc-ceeeeee
Q psy9316 185 SGDKTVRIWDART-QKSQI---I-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH-LMETRSL 258 (264)
Q Consensus 185 ~~dg~i~iwD~~t-~~~~~---~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h-~~~~~~~ 258 (264)
+.|++|++||+.+ .+... . .+...+.+++|+|+|++||+|+.|+.|++||+..+.... ...+.|| ...+.+|
T Consensus 510 s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~--~~~~~~h~~~~v~~v 587 (611)
T 1nr0_A 510 DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP--IIIKGAHAMSSVNSV 587 (611)
T ss_dssp ETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC--EEETTSSTTSCEEEE
T ss_pred cCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccccc--chhhccCcccCeeEE
Confidence 9999999999987 43211 1 256678999999999999999999999999987643211 1346688 6666654
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.2e-27 Score=207.89 Aligned_cols=214 Identities=16% Similarity=0.261 Sum_probs=170.4
Q ss_pred CCceEeecCCCeeEEEeecCceEEecccc--------ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCC
Q psy9316 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTH--------NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84 (264)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--------~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~ 84 (264)
.-...+.|.+. ..++++.|+.+++|... .....+.+|.+.|.+++|+|++++|++++.|++|++||+....
T Consensus 109 v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~ 187 (354)
T 2pbi_B 109 VMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ 187 (354)
T ss_dssp CCEEEECTTSS-EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCC-EEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe
Confidence 34456777775 45678999999998542 2345677899999999999999999999999999999986532
Q ss_pred CCcccEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcE
Q psy9316 85 DLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSV 144 (264)
Q Consensus 85 ~~~~~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i 144 (264)
....+.+|...|.+++|+|.. ++++++|+.||.|++||+++++. ...+++++.|+.|
T Consensus 188 ---~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 188 ---LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp ---EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ---EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 234578999999999998753 47999999999999999987542 1257899999999
Q ss_pred EEEEeccCCCccceEEEe--ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCE
Q psy9316 145 AIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNT 220 (264)
Q Consensus 145 ~i~~~~~~~~~~~~~~~~--~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~ 220 (264)
++|+++..... ..+. .+...+.+++|+|+ +.++++++.|+.|++||+.+++... ..+.+.+.+++|+|+|++
T Consensus 265 ~lwd~~~~~~~---~~~~~~~~~~~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 265 RLYDLRADREV---AIYSKESIIFGASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp EEEETTTTEEE---EEECCTTCCSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSC
T ss_pred EEEECCCCcEE---EEEcCCCcccceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCE
Confidence 99998653221 1222 23347889999985 5789999999999999998876432 235667899999999999
Q ss_pred EEEeeCCCeEEEEE
Q psy9316 221 IAVGNKEDLVTFID 234 (264)
Q Consensus 221 la~gs~d~~i~~~d 234 (264)
|++|+.|+.|++|+
T Consensus 341 l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 341 FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEecC
Confidence 99999999999996
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=4.7e-29 Score=213.29 Aligned_cols=191 Identities=24% Similarity=0.400 Sum_probs=147.6
Q ss_pred ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecC-CCCeEEEEeCCCcEEEE
Q psy9316 46 EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVRIW 124 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~-~~~~l~s~s~dg~i~vw 124 (264)
.+.+|.+.|.+++|+|+|++|++|+.|++|++||+.... ......+.+|.+.|.+++|++. ++.+|++++.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 356899999999999999999999999999999986422 1223457899999999999753 45789999999999999
Q ss_pred ECCCCCc-----------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC----
Q psy9316 125 DARTQKS-----------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN---- 177 (264)
Q Consensus 125 d~~~~~~-----------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~---- 177 (264)
|+++++. ...+++++.|+.|++|+++..........+.+|...|.++.|+|..
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 9976421 1257889999999999987543322122346788899999999863
Q ss_pred ------------CCEEEEEeCCCcEEEEeCCCCcc-----eeEeecCceEEEEEcCCC----CEEEEeeCCCeEEEEEcc
Q psy9316 178 ------------PDLLSTASGDKTVRIWDARTQKS-----QIIATKGENINITWAPNG----NTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 178 ------------~~~i~s~~~dg~i~iwD~~t~~~-----~~~~~~~~~~~v~~sp~g----~~la~gs~d~~i~~~d~~ 236 (264)
..+|++++.|++|++||++.... .+..+...+.+++|+|++ ++|++|+.|+.|++||+.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 35899999999999999975421 122345668999999987 899999999999999987
Q ss_pred c
Q psy9316 237 K 237 (264)
Q Consensus 237 ~ 237 (264)
.
T Consensus 247 ~ 247 (316)
T 3bg1_A 247 D 247 (316)
T ss_dssp S
T ss_pred C
Confidence 6
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=1e-27 Score=210.88 Aligned_cols=233 Identities=24% Similarity=0.372 Sum_probs=171.8
Q ss_pred ceEeecCCCeeEEEeecCceEEeccc--cccccccccCC------------------CCEEEEEECCCCCeEEEEECCCc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHG------------------SKVHSVAWSCDGRRLASGSFDKS 74 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~------------------~~V~~l~~s~~g~~l~s~s~dg~ 74 (264)
...+.|.|.. ++++ .++.+++|+. .+.+..+..|. ..|.+++|+|++++|++|+.|+.
T Consensus 69 ~v~fspdg~~-la~g-~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~ 146 (393)
T 1erj_A 69 CVKFSNDGEY-LATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRL 146 (393)
T ss_dssp EEEECTTSSE-EEEE-CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCE-EEEE-cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCe
Confidence 3466676653 3343 3677888764 34444444442 24999999999999999999999
Q ss_pred EEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEE
Q psy9316 75 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIML 135 (264)
Q Consensus 75 i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~ 135 (264)
|++||+... .....+.+|...|.+++|+|++ .++++++.|++|++||+++++. ...+
T Consensus 147 i~iwd~~~~---~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 147 IRIWDIENR---KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp EEEEETTTT---EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred EEEEECCCC---cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 999998642 2334578999999999999965 6889999999999999987542 2367
Q ss_pred EeecCCCcEEEEEeccCCCccce----EEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-----------
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------- 200 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~~----~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~----------- 200 (264)
++++.|+.|++|+++........ ....+|...|.+++|+|+ +.+|++++.||.|++||+++...
T Consensus 223 ~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 223 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEEC---------------C
T ss_pred EEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 88999999999998653321111 112578899999999985 57889999999999999986421
Q ss_pred ---eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 201 ---QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 201 ---~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
....+...+.+++|+|++++|++|+.|+.|++||+..+.. ...+.||...+.+|
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~----~~~l~~h~~~v~~v 358 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP----LLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEE
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE----EEEECCCCCCEEEE
Confidence 1122345688999999999999999999999999876433 34567888777665
No 29
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=7e-28 Score=207.91 Aligned_cols=210 Identities=19% Similarity=0.363 Sum_probs=167.4
Q ss_pred ceEeecCCCeeEEEeecCceEEeccccc------cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTHN------DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~------~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
...+.|.+. +.++++.|+.+++|+... ..+.+.+|.+.|.++.|++++. |++++.|++|++||+... ..
T Consensus 102 ~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~ 176 (340)
T 1got_B 102 TCAYAPSGN-YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQ 176 (340)
T ss_dssp EEEECTTSS-EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EE
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cE
Confidence 345666664 567889999999997542 3456789999999999998765 889999999999998642 23
Q ss_pred cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEe
Q psy9316 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFAL 149 (264)
Q Consensus 89 ~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~ 149 (264)
...+.+|...|.+++|+|++ .++++|+.||.|++||++++.. ...+++++.|+.|++|++
T Consensus 177 ~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 34577899999999999954 7899999999999999987542 125789999999999998
Q ss_pred ccCCCccceEEEe--ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce--eEeecCceEEEEEcCCCCEEEEee
Q psy9316 150 DKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ--IIATKGENINITWAPNGNTIAVGN 225 (264)
Q Consensus 150 ~~~~~~~~~~~~~--~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~--~~~~~~~~~~v~~sp~g~~la~gs 225 (264)
+..... ..+. .+...|.+++|+|+ +.++++|+.||.|++||+.+.+.. ...+.+.+.+++|+|+|.+|++|+
T Consensus 256 ~~~~~~---~~~~~~~~~~~v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 256 RADQEL---MTYSHDNIICGITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp TTTEEE---EEECCTTCCSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCcEE---EEEccCCcccceEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 653221 1221 23357999999985 578999999999999999887642 334567789999999999999999
Q ss_pred CCCeEEEEE
Q psy9316 226 KEDLVTFID 234 (264)
Q Consensus 226 ~d~~i~~~d 234 (264)
.|+.|++||
T Consensus 332 ~D~~i~iWd 340 (340)
T 1got_B 332 WDSFLKIWN 340 (340)
T ss_dssp TTSCEEEEC
T ss_pred CCccEEecC
Confidence 999999996
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=206.44 Aligned_cols=223 Identities=23% Similarity=0.357 Sum_probs=179.0
Q ss_pred CCceEeecCCCeeEEEeecCceEEecccc----ccccccccCCCCEEEEEECCC--CCeEEEEECCCcEEEEEeccCCCC
Q psy9316 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDL 86 (264)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~h~~~V~~l~~s~~--g~~l~s~s~dg~i~v~~~~~~~~~ 86 (264)
.....+.|.+. .+++++.|+.+++|+.. ..+..+.+|.+.|.+++|+++ +++|++|+.||.|++|++... ..
T Consensus 14 v~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~ 91 (379)
T 3jrp_A 14 IHDAVLDYYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RW 91 (379)
T ss_dssp EEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-EE
T ss_pred EEEEEEcCCCC-EEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-ce
Confidence 34446777765 56788899999999753 456678899999999999987 999999999999999998753 22
Q ss_pred cccEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCC----------------------------------c
Q psy9316 87 NKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQK----------------------------------S 131 (264)
Q Consensus 87 ~~~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~----------------------------------~ 131 (264)
.....+..|...|.+++|+|.. +.++++++.||.|++||++... .
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CT
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCC
Confidence 2334566799999999999963 5789999999999999997652 1
Q ss_pred ceEEEeecCCCcEEEEEeccCCCcc-ceEEEeccccceeeEEEcCCC--CCEEEEEeCCCcEEEEeCCCCcc----eeE-
Q psy9316 132 QIMLASGSFDKSVAIFALDKKGDLN-KEVVYRGHTGSVDQLCWHATN--PDLLSTASGDKTVRIWDARTQKS----QII- 203 (264)
Q Consensus 132 ~~~~~~~~~d~~i~i~~~~~~~~~~-~~~~~~~h~~~i~~i~~~~~~--~~~i~s~~~dg~i~iwD~~t~~~----~~~- 203 (264)
...+++++.|+.|.+|+++...... ....+.+|...|.+++|+|++ +.+|++++.||.|++||+++... ...
T Consensus 172 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 251 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLK 251 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS
T ss_pred CCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeec
Confidence 2457888999999999997654332 223567899999999999974 68999999999999999998642 111
Q ss_pred --eecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 204 --ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 204 --~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.+...+.+++|+|+|++|++++.|+.|++||+..
T Consensus 252 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 252 EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 1345688999999999999999999999999874
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.2e-27 Score=208.91 Aligned_cols=214 Identities=15% Similarity=0.227 Sum_probs=169.5
Q ss_pred cCCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccc
Q psy9316 20 PSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97 (264)
Q Consensus 20 ~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~ 97 (264)
+.++..+++++.|+.+++|+.. .....+.+|.+.|.+++|+|++++|++|+.|+.|++|++.... ....+.+|..
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~h~~ 182 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS---NPRTLIGHRA 182 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---CCEEEECCSS
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc---CceEEcCCCC
Confidence 3344566788999999999754 4556678999999999999999999999999999999987533 2345778999
Q ss_pred cEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------------------------------ceE
Q psy9316 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------------------------------QIM 134 (264)
Q Consensus 98 ~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------------------------------~~~ 134 (264)
.|.+++|+|++ .++++++.||.|++||+++++. ...
T Consensus 183 ~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 183 TVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp CEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred cEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 99999999954 7888999999999999986431 126
Q ss_pred EEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc---eeEeecC-ceE
Q psy9316 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---QIIATKG-ENI 210 (264)
Q Consensus 135 ~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~---~~~~~~~-~~~ 210 (264)
+++++.|+.|.+|+++..... ......|...|.+++|+|++..+|++++.||.|++||+++... ....+.. .+.
T Consensus 262 l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 339 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQT--IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPIN 339 (420)
T ss_dssp EEEEETTSCEEEEETTTCCEE--EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEE
T ss_pred EEEEcCCCeEEEEECCCCcee--EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCce
Confidence 788999999999998654322 1223467889999999997766999999999999999998753 2222233 455
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 211 ~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
.+ +.|++++|++++.|+.|++||+.....
T Consensus 340 ~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 340 NV-YFAAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp EE-EEETTEEEEEETTTEEEEEEEECCTTC
T ss_pred EE-EeCCCCEEEEecCCccEEEEeccCCCC
Confidence 55 556889999999999999999987433
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=1.5e-27 Score=204.14 Aligned_cols=190 Identities=24% Similarity=0.329 Sum_probs=155.7
Q ss_pred ccccccCCCCEEEEEECCCC-CeEEEEECCCcEEEEEeccCCCC--cccEEEecccccEEeEEEecCCCCeEEEEeCCCc
Q psy9316 44 IKEYQAHGSKVHSVAWSCDG-RRLASGSFDKSVAIFALDKKGDL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 120 (264)
Q Consensus 44 ~~~~~~h~~~V~~l~~s~~g-~~l~s~s~dg~i~v~~~~~~~~~--~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~ 120 (264)
..++.+|.+.|.+++|+|++ ++|++|+.|++|++|++...... .....+.+|...|.+++|+|++ .++++++.|++
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~ 88 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKT 88 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCE
Confidence 44678999999999999965 89999999999999998643221 1234578999999999999854 78999999999
Q ss_pred EEEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC----
Q psy9316 121 VRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN---- 177 (264)
Q Consensus 121 i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~---- 177 (264)
|++||+++++. ...+++++.|+.|++|+++. .....+.+|...|..+.|+|..
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEEEECCC-----
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEEEEEccCCCCCC
Confidence 99999987642 12578999999999999852 1234567899999999999853
Q ss_pred -CCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 178 -PDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 178 -~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
...+++++.|+.|++||+++.+... ..+...+.+++|+|+|++|++|+.|+.|++||+..+
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 3489999999999999999876432 235567899999999999999999999999998764
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=4.2e-27 Score=203.36 Aligned_cols=227 Identities=17% Similarity=0.249 Sum_probs=178.3
Q ss_pred EeecCCCCCceEeecCCCeeEEEeecCceEEeccccc----cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEec
Q psy9316 6 IQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHN----DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALD 81 (264)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~ 81 (264)
+.+|........+.|.+. +.++++.|+.+++|+... .+..+.+|.+.|.+++|+|++++|++++.|+.|++|++.
T Consensus 4 ~~~~~~~i~~~~~s~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRT-QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSS-EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 345544455567778775 566788899999997643 567888999999999999999999999999999999986
Q ss_pred cCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-----------------------ceEEEee
Q psy9316 82 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-----------------------QIMLASG 138 (264)
Q Consensus 82 ~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-----------------------~~~~~~~ 138 (264)
.. .......+..|...|.+++|+|++ .++++++.||.+++||++.... ...++++
T Consensus 83 ~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 83 GR-TWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TT-EEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CC-eeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 42 222223345788999999999855 7899999999999999876431 1257888
Q ss_pred cCCCcEEEEEeccCC---------------CccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE
Q psy9316 139 SFDKSVAIFALDKKG---------------DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII 203 (264)
Q Consensus 139 ~~d~~i~i~~~~~~~---------------~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~ 203 (264)
+.|+.+.+|+++... .......+..|...|.+++|+|+ +.+|++++.||.|++||+++.+....
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEEEEEeCCCEEEEEECCCCceeEE
Confidence 999999999974211 11122345688899999999985 46889999999999999998875332
Q ss_pred --eecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 204 --ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 204 --~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.+...+.+++|+|++++|++| .|+.+++||++.
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 334568899999999999988 899999999987
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=2.5e-27 Score=219.92 Aligned_cols=214 Identities=21% Similarity=0.335 Sum_probs=167.3
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
.+.|.|.. ++++. ++.+++|+. .+....|.+|.+.|.+++|+|+|++|++|+.|++|++||+.... ......+.+
T Consensus 25 ~~spdg~~-l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~-~~~~~~~~~ 101 (611)
T 1nr0_A 25 GNTPAGDK-IQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT-HILKTTIPV 101 (611)
T ss_dssp EECTTSSE-EEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT-CCEEEEEEC
T ss_pred eeCCCCCE-EEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc-ceeeEeecc
Confidence 45565543 34444 568888865 45677899999999999999999999999999999999985422 222235678
Q ss_pred ccccEEeEEEecCCCCeEEEEeCC----CcEEEEECCCCC------------------cceEEEeecCCCcEEEEEeccC
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASGD----KTVRIWDARTQK------------------SQIMLASGSFDKSVAIFALDKK 152 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~d----g~i~vwd~~~~~------------------~~~~~~~~~~d~~i~i~~~~~~ 152 (264)
|.+.|.+++|+|++ .++++++.+ +.|++||..... ....+++++.|+++++|+....
T Consensus 102 ~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~ 180 (611)
T 1nr0_A 102 FSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF 180 (611)
T ss_dssp SSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB
T ss_pred cCCceEEEEECCCC-CEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC
Confidence 99999999999966 566666654 478899853211 0125899999999999996432
Q ss_pred CCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE---------eecCceEEEEEcCCCCEEEE
Q psy9316 153 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---------ATKGENINITWAPNGNTIAV 223 (264)
Q Consensus 153 ~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~---------~~~~~~~~v~~sp~g~~la~ 223 (264)
.....+.+|...|.+++|+|+ +.+|++++.|++|++||+.+++.... .+.+.+.+++|+|+|++|++
T Consensus 181 ---~~~~~l~~H~~~V~~v~fspd-g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 181 ---KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp ---EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred ---eEeeeeccccCceEEEEECCC-CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEE
Confidence 223457889999999999995 57999999999999999988764322 24567899999999999999
Q ss_pred eeCCCeEEEEEcccC
Q psy9316 224 GNKEDLVTFIDVVKS 238 (264)
Q Consensus 224 gs~d~~i~~~d~~~~ 238 (264)
|+.|+.|++||+..+
T Consensus 257 ~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 257 ASADKTIKIWNVATL 271 (611)
T ss_dssp EETTSEEEEEETTTT
T ss_pred EeCCCeEEEEeCCCC
Confidence 999999999998754
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=7.4e-27 Score=198.35 Aligned_cols=242 Identities=22% Similarity=0.313 Sum_probs=181.7
Q ss_pred eEeecCCCC--CceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEe
Q psy9316 5 VIQFHTPKS--PEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80 (264)
Q Consensus 5 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~ 80 (264)
+..+.++.. ....+.|.+. ..++++.|+.+++|+. .+..+.+.+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 344444433 3346667664 5678899999999975 4556778899999999999999999999999999999998
Q ss_pred ccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCC
Q psy9316 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFD 141 (264)
Q Consensus 81 ~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d 141 (264)
.... ....+.+|...|.+++|+|++ .++++++.||.|++||+++++. ...+++++.|
T Consensus 95 ~~~~---~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 95 SSGK---CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp TTCC---EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCc---EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 6532 234577899999999999855 7899999999999999987542 1257889999
Q ss_pred CcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ecCc--eEEEEEc-C
Q psy9316 142 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TKGE--NINITWA-P 216 (264)
Q Consensus 142 ~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~~~--~~~v~~s-p 216 (264)
+.|.+|+++...... .....+...+..++|+|+ +.++++++.||.|++||+++.+..... +... .....++ +
T Consensus 171 ~~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 171 GLCRIWDTASGQCLK--TLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp SCEEEEETTTCCEEE--EECCSSCCCEEEEEECTT-SSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CcEEEEECCCCceee--EEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 999999986543221 122345668999999985 468889999999999999987653322 1221 2234444 6
Q ss_pred CCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 217 NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 217 ~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
++.+|++|+.|+.|++||+..+. ...+++||...+.++
T Consensus 248 ~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 248 GGKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVIST 285 (312)
T ss_dssp SSCEEEECCTTSCEEEEETTTCC----EEEEECCCSSCEEEE
T ss_pred CCcEEEEECCCCEEEEEECCCch----hhhhhhccCCcEEEE
Confidence 88999999999999999987532 334567777665543
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=7.3e-27 Score=205.46 Aligned_cols=217 Identities=22% Similarity=0.336 Sum_probs=171.0
Q ss_pred eEeecCCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~ 93 (264)
..+.|.+. ++++++.|+.+++|+.. +.+..+.+|.+.|.+++|+|++++|++++.|++|++||+... . ....+
T Consensus 129 v~~s~dg~-~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~-~--~~~~~- 203 (393)
T 1erj_A 129 VCFSPDGK-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG-Q--CSLTL- 203 (393)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-E--EEEEE-
T ss_pred EEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC-e--eEEEE-
Confidence 35566554 56788999999999764 556788999999999999999999999999999999998642 1 11223
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc--------------------------ceEEEeecCCCcEEEE
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--------------------------QIMLASGSFDKSVAIF 147 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------------~~~~~~~~~d~~i~i~ 147 (264)
.+...+.+++|+|.++.++++++.||.|++||+++++. ...+++++.|+.|++|
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 35677999999997778999999999999999876431 1257889999999999
Q ss_pred EeccCCCc---------cceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcC
Q psy9316 148 ALDKKGDL---------NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAP 216 (264)
Q Consensus 148 ~~~~~~~~---------~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp 216 (264)
+++..... .....+.+|...|.+++|+|+ +.+|++++.||.|++||+++++... ..+...+.+++|+|
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 98643211 112356789999999999985 4688999999999999999887532 34566788999876
Q ss_pred ------CCCEEEEeeCCCeEEEEEcccC
Q psy9316 217 ------NGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 217 ------~g~~la~gs~d~~i~~~d~~~~ 238 (264)
++++|++|+.|+.|++|++.+.
T Consensus 363 ~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 363 GSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CcCcCCCCCEEEEECCCCcEEECccccc
Confidence 7899999999999999998653
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=3.6e-27 Score=221.61 Aligned_cols=223 Identities=21% Similarity=0.307 Sum_probs=176.6
Q ss_pred eecCCCCCceEeecCCCeeEEEeecCceEEeccccc-------cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEE
Q psy9316 7 QFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHN-------DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFA 79 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~ 79 (264)
+.|+-......+.|.++.++++|+.|+.+++|+... ..+.+.+|.+.|.+++|+|++++|++|+.|++|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 334333344455566667788999999999997532 2456789999999999999999999999999999999
Q ss_pred eccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------------ceEE
Q psy9316 80 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------------QIML 135 (264)
Q Consensus 80 ~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------------~~~~ 135 (264)
+... .....+.+|...|.+++|+|++ .++++++.|++|++||+..... ...+
T Consensus 459 ~~~~---~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 459 LAAG---VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp TTTT---EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred CCCC---cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 8642 2234577999999999999955 6788999999999999754210 1257
Q ss_pred EeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEE
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITW 214 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~ 214 (264)
++++.|+.|++|+++... ....+.+|...|.+++|+|+ +.+|++++.||.|++||+++++.... .....+.+++|
T Consensus 535 ~s~s~d~~v~vwd~~~~~---~~~~~~~h~~~v~~v~~spd-g~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCK---LRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 610 (694)
T ss_dssp EEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTT-SSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence 899999999999986532 23456789999999999985 57999999999999999998875322 23456788999
Q ss_pred cCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 215 APNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 215 sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+|++.+|++++ ++.|++||++.+
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTT
T ss_pred cCCCcEEEEEc-CCCEEEEECCCC
Confidence 99999988877 666999998764
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.6e-26 Score=197.28 Aligned_cols=236 Identities=19% Similarity=0.273 Sum_probs=177.5
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc-------cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN-------DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~ 86 (264)
....+.|.++.++++|+.|+.|++|+... ..+.+.+|.+.|.+++|+|++++|++|+.|+.|++|+....
T Consensus 42 ~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~--- 118 (340)
T 4aow_A 42 TQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG--- 118 (340)
T ss_dssp EEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---
T ss_pred EEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc---
Confidence 34477787777888999999999997532 34678899999999999999999999999999999987542
Q ss_pred cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------ceEEEeecCCCcE
Q psy9316 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------QIMLASGSFDKSV 144 (264)
Q Consensus 87 ~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~~~~~~~~~d~~i 144 (264)
........+...+....+.+.+ .++++++.|+.+++||+..... ...+++++.|+.|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i 197 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV 197 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred ceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEE
Confidence 2223355677778888888754 6788999999999999865321 1246788999999
Q ss_pred EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEE
Q psy9316 145 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAV 223 (264)
Q Consensus 145 ~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~ 223 (264)
++|+++... ....+.+|..+|.+++|+|+ +.+|++++.||.|++||+++.+.... .....+.++.|+|++.+++
T Consensus 198 ~i~d~~~~~---~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 272 (340)
T 4aow_A 198 KVWNLANCK---LKTNHIGHTGYLNTVTVSPD-GSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLC- 272 (340)
T ss_dssp EEEETTTTE---EEEEECCCSSCEEEEEECTT-SSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEE-
T ss_pred EEEECCCCc---eeeEecCCCCcEEEEEECCC-CCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceee-
Confidence 999986432 23456789999999999985 57899999999999999998875333 3345678899999876665
Q ss_pred eeCCCeEEEEEcccCCC-----CCCCcccCcccceeeeee
Q psy9316 224 GNKEDLVTFIDVVKSLP-----PRERTLTSRGHLMETRSL 258 (264)
Q Consensus 224 gs~d~~i~~~d~~~~~~-----~~~~~~~~~~h~~~~~~~ 258 (264)
++.|+.|++||++.... .........+|...+.+|
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 312 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL 312 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence 55699999999875322 122223456777777665
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=4.3e-28 Score=212.37 Aligned_cols=193 Identities=20% Similarity=0.325 Sum_probs=156.8
Q ss_pred ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 42 NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 42 ~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
...+++.+|.+.|.+++|+|++++|++|+.|++|++||+... .....+..|...|.+++|+|++ .++++|+.|+.+
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~---~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v 132 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS---QKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSAC 132 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT---EEEEEEECCCTTCCCCEECTTS-SEEEECCSSSCC
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---ccceEEecCCCCEEEEEECCCC-CEEEEeeCCCcE
Confidence 345678999999999999999999999999999999997642 2334577899999999999955 789999999999
Q ss_pred EEEECCCCC---------------------------cceEEEeecCCCcEEEEEeccCCCccce--EEEeccccceeeEE
Q psy9316 122 RIWDARTQK---------------------------SQIMLASGSFDKSVAIFALDKKGDLNKE--VVYRGHTGSVDQLC 172 (264)
Q Consensus 122 ~vwd~~~~~---------------------------~~~~~~~~~~d~~i~i~~~~~~~~~~~~--~~~~~h~~~i~~i~ 172 (264)
++||+.+.. ....+++++.|+.|++||+......... ....+|...|.++.
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999986421 0124889999999999998754322110 00157888999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCc-c--eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 173 WHATNPDLLSTASGDKTVRIWDARTQK-S--QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 173 ~~~~~~~~i~s~~~dg~i~iwD~~t~~-~--~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
|+|.++.+|++|+.||+|++||++... . ....+.+.+.+++|+|+|++|++|+.|+.|++||++.+
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 998778899999999999999998543 2 22335667899999999999999999999999999864
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.8e-27 Score=204.83 Aligned_cols=217 Identities=12% Similarity=0.202 Sum_probs=173.9
Q ss_pred eEeecCC---CeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 16 YKLLPSG---SQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 16 ~~~~~~~---~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
..+.|.+ +.++++++.|+.+++|+. .+.+..+.+|.+.|.+++|+| ++++|++++.||.|++|++.... ..
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~ 151 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT---LV 151 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE---EE
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe---EE
Confidence 4566663 356778999999999975 456778889999999999999 99999999999999999986422 22
Q ss_pred EEE---ecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-----------------------------------
Q psy9316 90 VVY---RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------------------- 131 (264)
Q Consensus 90 ~~~---~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------------------- 131 (264)
..+ ..|...|.+++|+|++ .++++++.||.|++||+++.+.
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred EEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 334 5799999999999954 7899999999999999986421
Q ss_pred ----------ceEEEeecCCCcEEEEEeccCCC-----------ccceEEEeccccceeeEEEcCCC-CCEEEEEeCCCc
Q psy9316 132 ----------QIMLASGSFDKSVAIFALDKKGD-----------LNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKT 189 (264)
Q Consensus 132 ----------~~~~~~~~~d~~i~i~~~~~~~~-----------~~~~~~~~~h~~~i~~i~~~~~~-~~~i~s~~~dg~ 189 (264)
...+++++.|+.|.+|+++.... ......+..|...|.+++|+|+. +.+|++++.||.
T Consensus 231 ~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~ 310 (366)
T 3k26_A 231 RNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGK 310 (366)
T ss_dssp SSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSC
T ss_pred cceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCc
Confidence 23678899999999999875432 11234567788899999999862 679999999999
Q ss_pred EEEEeCCCCcce------eEee--cCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 190 VRIWDARTQKSQ------IIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 190 i~iwD~~t~~~~------~~~~--~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
|++||+++.+.. ...+ ...+.+++|+|++++|++|+.|+.|++||+.
T Consensus 311 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 311 LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 999999987531 1122 3568899999999999999999999999975
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=7.6e-27 Score=198.29 Aligned_cols=187 Identities=28% Similarity=0.435 Sum_probs=155.0
Q ss_pred ccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEE
Q psy9316 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123 (264)
Q Consensus 44 ~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~v 123 (264)
..++.+|.+.|.+++|+|++++|++|+.|+.|++|++.. +. ....+.+|...|.+++|+|++ +++++++.||.|++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~~--~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~v 91 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GK--FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKI 91 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CC--EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-cc--cchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEE
Confidence 345779999999999999999999999999999999764 22 234567899999999999954 78999999999999
Q ss_pred EECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE
Q psy9316 124 WDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA 184 (264)
Q Consensus 124 wd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~ 184 (264)
||+++++. ...+++++.|+.|.+|+++... ....+..|..+|.+++|+|+ +.+++++
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~ 167 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSAVHFNRD-GSLIVSS 167 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTT-SSEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEEEEEcCC-CCEEEEE
Confidence 99987542 1257889999999999986543 23356788899999999985 5688999
Q ss_pred eCCCcEEEEeCCCCcceeEe---ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 185 SGDKTVRIWDARTQKSQIIA---TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 185 ~~dg~i~iwD~~t~~~~~~~---~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+.||.|++||+++.+..... ....+..++|+|++++|++++.|+.|++||++.+
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999999988753322 2235678999999999999999999999998764
No 42
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=6.1e-27 Score=208.28 Aligned_cols=231 Identities=19% Similarity=0.409 Sum_probs=182.9
Q ss_pred EeecCCCCCce-EeecCCCeeEEEeecCceEEecccc------------ccccccccCCCCEEEEEECCCCC-eEEEEEC
Q psy9316 6 IQFHTPKSPEY-KLLPSGSQFHLVCKIDDYVKHFNTH------------NDIKEYQAHGSKVHSVAWSCDGR-RLASGSF 71 (264)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~~~~h~~~V~~l~~s~~g~-~l~s~s~ 71 (264)
..+.++...+. ++.|.+..+.++++.++.+++|+.. ..+..+.+|.+.|.+++|+|+++ +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34445555444 7777656677788899999998754 34566789999999999999988 9999999
Q ss_pred CCcEEEEEeccCCCCc----ccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC---c-------------
Q psy9316 72 DKSVAIFALDKKGDLN----KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK---S------------- 131 (264)
Q Consensus 72 dg~i~v~~~~~~~~~~----~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~---~------------- 131 (264)
||.|++|++....... ....+..|...|.+++|+|.+..++++++.||.|++||+++.. .
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 9999999987532211 1234668999999999999778899999999999999998652 1
Q ss_pred -------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc-----
Q psy9316 132 -------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK----- 199 (264)
Q Consensus 132 -------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~----- 199 (264)
..++++|+.|+.|.+|+++.... ....+..|...|.+++|+|.+..+|++++.||.|++||+....
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 11578999999999999876332 2345678999999999999887889999999999999998721
Q ss_pred --------ceeE---eecCceEEEEEcCCCC-EEEEeeCCCeEEEEEcccC
Q psy9316 200 --------SQII---ATKGENINITWAPNGN-TIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 200 --------~~~~---~~~~~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~~ 238 (264)
.... .+...+.+++|+|+++ +|++++.|+.|++|++...
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 1111 2344688999999999 8999999999999998763
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=210.00 Aligned_cols=222 Identities=17% Similarity=0.277 Sum_probs=178.0
Q ss_pred EeecCCCeeEEEeecCceEEeccccc------cccccccCCCCEEEEEECCC-CCeEEEEECCCcEEEEEeccCC-----
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHN------DIKEYQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALDKKG----- 84 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~------~~~~~~~h~~~V~~l~~s~~-g~~l~s~s~dg~i~v~~~~~~~----- 84 (264)
.+.|.+. +++++..|+.+++|+... .+..+.+|.+.|.+++|+|+ +++|++++.|+.|++|++....
T Consensus 74 ~~s~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 74 DWSHNNK-IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EECSSSS-CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EECCCCC-eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 5666554 567788899999997754 56778899999999999998 8999999999999999987643
Q ss_pred -CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc--------------------------ceEEEe
Q psy9316 85 -DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--------------------------QIMLAS 137 (264)
Q Consensus 85 -~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------------~~~~~~ 137 (264)
..........|...|.+++|+|+++.++++++.||.|++||+++++. ...+++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 11111123578899999999997678999999999999999976421 125778
Q ss_pred ecCCC---cEEEEEeccCCCccceEEEe-ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEE
Q psy9316 138 GSFDK---SVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENIN 211 (264)
Q Consensus 138 ~~~d~---~i~i~~~~~~~~~~~~~~~~-~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~ 211 (264)
++.|+ .|.+|+++...... ..+. +|...|.+++|+|.++.+|++++.||.|++||+++.+... ..+...+.+
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPL--QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFK 310 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCS--BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCC
T ss_pred EECCCCCceEEEEeCCCCCCCc--EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEE
Confidence 88888 99999987643221 2345 7899999999999667889999999999999999887533 234566889
Q ss_pred EEEcCCC-CEEEEeeCCCeEEEEEcccCCCC
Q psy9316 212 ITWAPNG-NTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 212 v~~sp~g-~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
++|+|++ .+|++++.|+.|++||+......
T Consensus 311 ~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 311 TKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred EEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 9999999 89999999999999999875543
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=4.8e-27 Score=202.78 Aligned_cols=193 Identities=22% Similarity=0.305 Sum_probs=151.3
Q ss_pred cccccccCCCCEEEEEE-----CC-CCCeEEEEECCCcEEEEEeccCCCC----cccEEEecccccEEeEEEecCCCCeE
Q psy9316 43 DIKEYQAHGSKVHSVAW-----SC-DGRRLASGSFDKSVAIFALDKKGDL----NKEVVYRGHTGSVDQLCWHATNPDLL 112 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~-----s~-~g~~l~s~s~dg~i~v~~~~~~~~~----~~~~~~~~h~~~v~~i~~~~~~~~~l 112 (264)
....+.+|.+.|.+++| ++ ++++|++|+.|++|++|++...... .....+.+|...|.+++|+|++ .++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEE
Confidence 34567899999999999 76 9999999999999999998653211 1223467899999999999854 789
Q ss_pred EEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEE
Q psy9316 113 STASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173 (264)
Q Consensus 113 ~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~ 173 (264)
++++.|++|++||+++++.. ..+++++.|+.|++|++.... ........+|...|.+++|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeee
Confidence 99999999999999875421 257889999999999985211 1000011268889999999
Q ss_pred cCCCC---------CEEEEEeCCCcEEEEeCCCCcc-eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 174 HATNP---------DLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 174 ~~~~~---------~~i~s~~~dg~i~iwD~~t~~~-~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+|... .++++++.||.|++||...... ....+...+.+++|+|+|++|++|+.|+.|++||+..
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 98642 5899999999999999543322 2234556789999999999999999999999999854
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.5e-27 Score=207.33 Aligned_cols=222 Identities=16% Similarity=0.255 Sum_probs=163.2
Q ss_pred CCCCceEeecCCCeeEEEeecCceEEecccc----ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC
Q psy9316 11 PKSPEYKLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86 (264)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~ 86 (264)
.......+.|.+. ++++++.|+.+++|+.. ..+..+.+|.+.|.+++|+|++++|++++.|+.|++|++......
T Consensus 12 ~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 12 KPSYEHAFNSQRT-EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SCCSCCEECSSSS-EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CcEEEEEECCCCC-EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 3334457777665 45677789999999764 467788999999999999999999999999999999998764423
Q ss_pred cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEec-cc
Q psy9316 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG-HT 165 (264)
Q Consensus 87 ~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~-h~ 165 (264)
.....+..|...|.+++|+|++ .++++++.|+.|++||+++++... ....+.. |.
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~-----------------------~~~~~~~~h~ 146 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWW-----------------------VSKHLKRPLR 146 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CC-----------------------CCEEECSSCC
T ss_pred eeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccce-----------------------eeeEeecccC
Confidence 3344567899999999999954 678899999999999998654210 0112344 88
Q ss_pred cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc------------------ce-eEeecCceEEEEEcCCCCEEEEeeC
Q psy9316 166 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK------------------SQ-IIATKGENINITWAPNGNTIAVGNK 226 (264)
Q Consensus 166 ~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~------------------~~-~~~~~~~~~~v~~sp~g~~la~gs~ 226 (264)
..|.+++|+|+ +.+|++++.||.|++||+++.. .. ...+...+.+++|+|+|++|++|+.
T Consensus 147 ~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 147 STILSLDWHPN-NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp SCEEEEEECTT-SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred CCeEEEEEcCC-CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 89999999985 5789999999999999996332 10 0133456889999999999999999
Q ss_pred CCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 227 EDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 227 d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|+.|++||++.+..+.+...++.+|...+++|
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 257 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPRALITVKLSQLPLRSL 257 (377)
T ss_dssp TTEEC-CEECSTTSCEEECCCEECSSSCEEEE
T ss_pred CCcEEEEECCCCCCcceeeEeecCCCCceEEE
Confidence 99999999987655332245667777766654
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.2e-27 Score=206.51 Aligned_cols=235 Identities=14% Similarity=0.269 Sum_probs=178.7
Q ss_pred eEeecCCCeeEEEe----------ecCceEEecccccc----ccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEec
Q psy9316 16 YKLLPSGSQFHLVC----------KIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALD 81 (264)
Q Consensus 16 ~~~~~~~~~~~~~~----------~~d~~~~~~~~~~~----~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~ 81 (264)
..+.|.+..+.+++ +.|+.+++|+.... ......|.+.|.+++|+|++++|++|+.||.|++|++.
T Consensus 18 ~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~ 97 (416)
T 2pm9_A 18 FAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTN 97 (416)
T ss_dssp CCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCS
T ss_pred EeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecc
Confidence 34556655555566 78899999976432 22223688999999999999999999999999999987
Q ss_pred cCCC-CcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC------c-----------------------
Q psy9316 82 KKGD-LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK------S----------------------- 131 (264)
Q Consensus 82 ~~~~-~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~------~----------------------- 131 (264)
.... ......+.+|...|.+++|+|+++.++++++.||.|++||+++.+ .
T Consensus 98 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 177 (416)
T 2pm9_A 98 EANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL 177 (416)
T ss_dssp STTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC
T ss_pred cccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC
Confidence 5211 123345678999999999999767899999999999999997654 1
Q ss_pred ceEEEeecCCCcEEEEEeccCCCccceEEEecc------ccceeeEEEcCCCCCEEEEEeCCC---cEEEEeCCCCc-c-
Q psy9316 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGH------TGSVDQLCWHATNPDLLSTASGDK---TVRIWDARTQK-S- 200 (264)
Q Consensus 132 ~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h------~~~i~~i~~~~~~~~~i~s~~~dg---~i~iwD~~t~~-~- 200 (264)
...+++++.|+.|.+|+++.... ...+..| ...|.+++|+|++..++++++.|+ .|++||+++.. .
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~ 254 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL 254 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS
T ss_pred CcEEEEEcCCCCEEEEECCCCCc---ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc
Confidence 12578889999999999865322 2233333 678999999998778999999999 99999999863 2
Q ss_pred -eeE-eecCceEEEEEcC-CCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeee
Q psy9316 201 -QII-ATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257 (264)
Q Consensus 201 -~~~-~~~~~~~~v~~sp-~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~ 257 (264)
... .+...+.+++|+| ++++|++++.|+.|++||++.+. ...++.+|...+.+
T Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~----~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 255 QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE----QLSQFPARGNWCFK 310 (416)
T ss_dssp BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC----EEEEEECSSSCCCC
T ss_pred EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc----cceeecCCCCceEE
Confidence 222 3556789999999 99999999999999999987643 23344555554443
No 47
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=6.9e-27 Score=201.05 Aligned_cols=216 Identities=22% Similarity=0.380 Sum_probs=169.9
Q ss_pred eEeecCC--CeeEEEeecCceEEeccccc---cc-cccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 16 YKLLPSG--SQFHLVCKIDDYVKHFNTHN---DI-KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 16 ~~~~~~~--~~~~~~~~~d~~~~~~~~~~---~~-~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
..+.|.+ +.++++++.|+.+++|+... .+ ..+.+|.+.|.+++|+|++++|++++.||.|++|++.... .
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~ 120 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ----A 120 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE----E
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC----c
Confidence 3666664 56778899999999997643 23 6788999999999999999999999999999999986422 2
Q ss_pred EEEecccccEEeEEE--ecCCCCeEEEEeCCCcEEEEECCCCCcc-----------------------------------
Q psy9316 90 VVYRGHTGSVDQLCW--HATNPDLLSTASGDKTVRIWDARTQKSQ----------------------------------- 132 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~--~~~~~~~l~s~s~dg~i~vwd~~~~~~~----------------------------------- 132 (264)
.....|...|.+++| ++ +..++++++.||.|++||+++++..
T Consensus 121 ~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 121 IQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLEN 199 (368)
T ss_dssp EEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSS
T ss_pred eeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecc
Confidence 235679999999999 55 3468899999999999999765321
Q ss_pred -----------------------------eEEEeecCCCcEEEEEeccCCCccceEEEecccc------------ceeeE
Q psy9316 133 -----------------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG------------SVDQL 171 (264)
Q Consensus 133 -----------------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~------------~i~~i 171 (264)
..+++++.|+.+.+|+++..........+.+|.. +|.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 279 (368)
T 3mmy_A 200 QPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGI 279 (368)
T ss_dssp SCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEE
T ss_pred ccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEE
Confidence 0177888899999999875433233445566665 79999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 172 CWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 172 ~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+|+|+ +.+|++++.||.|++||+++++.... .+...+.+++|+|+|++|++|+.|+..+.|++..
T Consensus 280 ~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 280 AFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EECTT-TCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred EEecC-CCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 99995 46889999999999999998875332 3456788999999999999999998766666543
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-26 Score=200.80 Aligned_cols=195 Identities=20% Similarity=0.350 Sum_probs=158.4
Q ss_pred cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecC-CCCeEEEEeCCCcE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTV 121 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~-~~~~l~s~s~dg~i 121 (264)
.+..+.+|.+.|.+++|+|++++|++|+.||.|++|++... .......+.+|...|.+++|++. ++.+|++++.||.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 45678899999999999999999999999999999998632 22333457789999999999864 25799999999999
Q ss_pred EEEECCCCC---------------------c--ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC--
Q psy9316 122 RIWDARTQK---------------------S--QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-- 176 (264)
Q Consensus 122 ~vwd~~~~~---------------------~--~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~-- 176 (264)
++||+++++ . ...+++++.|+.|.+|+++..... ....+..|...|.+++|+|.
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC-CEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce-eeEEecCCCCceEEEEEcCccc
Confidence 999997753 1 235788899999999998765332 23356789999999999995
Q ss_pred ----------CCCEEEEEeCCCcEEEEeCCCCcce--e----EeecCceEEEEEcCC---CCEEEEeeCCCeEEEEEccc
Q psy9316 177 ----------NPDLLSTASGDKTVRIWDARTQKSQ--I----IATKGENINITWAPN---GNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 177 ----------~~~~i~s~~~dg~i~iwD~~t~~~~--~----~~~~~~~~~v~~sp~---g~~la~gs~d~~i~~~d~~~ 237 (264)
++.++++++.||.|++||+++.... . ..+...+.+++|+|+ +++|++++.|+.|++||++.
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 5689999999999999999876532 1 123456889999999 89999999999999999987
Q ss_pred CC
Q psy9316 238 SL 239 (264)
Q Consensus 238 ~~ 239 (264)
+.
T Consensus 241 ~~ 242 (379)
T 3jrp_A 241 EQ 242 (379)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 49
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.3e-26 Score=197.46 Aligned_cols=240 Identities=15% Similarity=0.204 Sum_probs=181.4
Q ss_pred CCceEeecCCCeeEEEeec---CceEEecccccc--ccc-cccCCCCEEEEEECCC---CCeEEEEECCCcEEEEEeccC
Q psy9316 13 SPEYKLLPSGSQFHLVCKI---DDYVKHFNTHND--IKE-YQAHGSKVHSVAWSCD---GRRLASGSFDKSVAIFALDKK 83 (264)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~--~~~-~~~h~~~V~~l~~s~~---g~~l~s~s~dg~i~v~~~~~~ 83 (264)
.....+.|.+..+.++++. |+.+++|+..+. ... ..+|.+.|.+++|+|+ +++|++|+.||.|++|++...
T Consensus 21 v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 100 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP 100 (357)
T ss_dssp EEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC
T ss_pred eEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC
Confidence 3445788888777667766 999999976432 222 2378999999999998 799999999999999998753
Q ss_pred CCCcccEEEecccccEEeEEEec-----CCCCeEEEEeCCCcEEEEECCCCCc---------------------------
Q psy9316 84 GDLNKEVVYRGHTGSVDQLCWHA-----TNPDLLSTASGDKTVRIWDARTQKS--------------------------- 131 (264)
Q Consensus 84 ~~~~~~~~~~~h~~~v~~i~~~~-----~~~~~l~s~s~dg~i~vwd~~~~~~--------------------------- 131 (264)
. .....+.+|...|.++.|.+ .++.++++++.||.|++||+++++.
T Consensus 101 ~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 101 E--MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp S--SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred C--ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 3 12345778999999997653 2457899999999999999986531
Q ss_pred -ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC--CCCEEEEEeCCCcEEEEeCCCCcce--eE---
Q psy9316 132 -QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQKSQ--II--- 203 (264)
Q Consensus 132 -~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~--~~~~i~s~~~dg~i~iwD~~t~~~~--~~--- 203 (264)
...+++++.|+.|.+|+++... ......|...|.+++|+|. ++.++++++.||.|++||+++.+.. ..
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMA----LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTE----EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEccCCeEEEEECccCc----eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeec
Confidence 1246778889999999986532 2334668889999999984 4578899999999999999876531 11
Q ss_pred --eecCceEEEEEcCCCC-EEEEeeCCCeEEEEEcccCCCCC---------------CCcccCcccceeeeee
Q psy9316 204 --ATKGENINITWAPNGN-TIAVGNKEDLVTFIDVVKSLPPR---------------ERTLTSRGHLMETRSL 258 (264)
Q Consensus 204 --~~~~~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~~~~~~---------------~~~~~~~~h~~~~~~~ 258 (264)
.+...+.+++|+|+++ +|++|+.|+.|++||++.+.... +...+..+|...++++
T Consensus 255 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~ 327 (357)
T 3i2n_A 255 EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL 327 (357)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE
T ss_pred cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE
Confidence 3456788999999999 89999999999999998654432 1233456676666654
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=2e-26 Score=201.01 Aligned_cols=194 Identities=16% Similarity=0.229 Sum_probs=157.9
Q ss_pred cccccccCCCCEEEEEECCCC-CeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDG-RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g-~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
..+.+.+|.+.|.+++|+|++ ++|++|+.||.|++|++.... ........+|...|.+++|+|.++.++++++.|+.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN-KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT-CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc-cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 455678999999999999999 999999999999999987532 222122236999999999999666899999999999
Q ss_pred EEEECCCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCE
Q psy9316 122 RIWDARTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180 (264)
Q Consensus 122 ~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~ 180 (264)
++||++.... ...+++++.|+.|.+|+++ + .....+..|...|.+++|+|++..+
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~--~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--G--HEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--S--CEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--C--CEEEEeccCCCcEEEEEECCCCCCE
Confidence 9999985321 1257889999999999983 2 2334567899999999999977669
Q ss_pred EEEEeCCCcEEEEeCCC----Ccc-eeEeecCceEEEEEcC-CCCEEEEeeCCCeEEEEEcccCCCC
Q psy9316 181 LSTASGDKTVRIWDART----QKS-QIIATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t----~~~-~~~~~~~~~~~v~~sp-~g~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
+++++.|+.|++||+++ ... ....+...+.+++|+| ++++|++++.|+.|++||++.+...
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 99999999999999997 332 2234566789999999 9999999999999999999875543
No 51
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3.9e-26 Score=208.96 Aligned_cols=226 Identities=27% Similarity=0.421 Sum_probs=179.8
Q ss_pred EeecCCCeeEEEeecCceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH 95 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h 95 (264)
.+.|.+. ..++++.|+.++.|+.. ..+..+.+|...|.+++|+|++++|++++.|+.|++|+.+ +. ....+.+|
T Consensus 310 ~~~~~~~-~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~--~~--~~~~~~~~ 384 (577)
T 2ymu_A 310 AFSPDGQ-TIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQ--LLQTLTGH 384 (577)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--CC--EEEEEECC
T ss_pred EECCCCC-EEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC--CC--EEEEecCC
Confidence 5556554 45678899999999753 4567788999999999999999999999999999999853 22 23456789
Q ss_pred cccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------ceEEEeecCCCcEEEEEeccCCCccc
Q psy9316 96 TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------QIMLASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 96 ~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------~~~~~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
...|.+++|+|++ +++++++.|+.|++||...... ...+++++.|+.+.+|+.. +. .
T Consensus 385 ~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~--~ 459 (577)
T 2ymu_A 385 SSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQ--L 459 (577)
T ss_dssp SSCEEEEEECTTS-SCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SC--E
T ss_pred CCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CC--E
Confidence 9999999999855 6888999999999999754311 1257888999999999853 22 2
Q ss_pred eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 158 ~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~-~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
...+.+|...|.+++|+|+ +.+|++++.|+.|++||...+.. ....+...+.+++|+|+|++|++++.|+.|++||..
T Consensus 460 ~~~~~~~~~~v~~~~~spd-~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 460 LQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEEECCSSCEEEEEECTT-SCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 3456789999999999985 57899999999999999754433 223456678999999999999999999999999953
Q ss_pred cCCCCCCCcccCcccceeeeee
Q psy9316 237 KSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 237 ~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
.+...++.||...+.+|
T Consensus 539 -----~~~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 539 -----GQLLQTLTGHSSSVWGV 555 (577)
T ss_dssp -----SCEEEEEECCSSCEEEE
T ss_pred -----CCEEEEEcCCCCCEEEE
Confidence 23445678998887765
No 52
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=5.6e-26 Score=198.21 Aligned_cols=204 Identities=19% Similarity=0.379 Sum_probs=162.8
Q ss_pred ceEEecc--ccccccccccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCcccEEE-----------eccccc
Q psy9316 33 DYVKHFN--THNDIKEYQAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNKEVVY-----------RGHTGS 98 (264)
Q Consensus 33 ~~~~~~~--~~~~~~~~~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~-----------~~h~~~ 98 (264)
..+++|. ..+..+.+.+|.+.|.+++|+| ++++|++|+.||.|++|++........ ... .+|...
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSY-YTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSC-EEECEEEEECTTCTTCCSSC
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccce-EeccccccccccccccCCCc
Confidence 3344443 3455667789999999999999 999999999999999999875432221 111 248999
Q ss_pred EEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccc
Q psy9316 99 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 99 v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
|.+++|+|.+..++++++.||.|++||+++++. ...+++++.|+.+.+|+++....
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--- 178 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC--- 178 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---
Confidence 999999997778999999999999999987532 12678889999999999875433
Q ss_pred eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee------------------EeecCceEEEEEcCCCC
Q psy9316 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI------------------IATKGENINITWAPNGN 219 (264)
Q Consensus 158 ~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~------------------~~~~~~~~~v~~sp~g~ 219 (264)
...+..|...|.+++|+|.+..++++++.||.|++||+++..... ..+...+.+++|+|+++
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 235678999999999999877789999999999999998765211 12345688999999999
Q ss_pred EEEEeeCCCeEEEEEcccCCC
Q psy9316 220 TIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 220 ~la~gs~d~~i~~~d~~~~~~ 240 (264)
+|++++.|+.+++||++.+..
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCB
T ss_pred EEEEecCCCeEEEEECCCCcc
Confidence 999999999999999987543
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3.8e-26 Score=209.10 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=167.7
Q ss_pred EeecCCCeeEEEeecCceEEeccc-cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT-HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH 95 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h 95 (264)
.+.|.+. ..+++..|+.+++|+. .+.+..+.+|.+.|.+++|+|++++|++++.|+.|++|+.+ +. ....+.+|
T Consensus 351 ~~s~~g~-~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~--~~--~~~~~~~~ 425 (577)
T 2ymu_A 351 AFSPDGQ-TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQ--LLQTLTGH 425 (577)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--CC--EEEEEECC
T ss_pred EECCCCC-EEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CC--EEEEecCC
Confidence 4556664 4567888999999975 45667888999999999999999999999999999999853 22 23456789
Q ss_pred cccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------ceEEEeecCCCcEEEEEeccCCCccc
Q psy9316 96 TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------QIMLASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 96 ~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------~~~~~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
...|.+++|+|++ .++++++.|+.|++||...... ...+++++.|+.|++|+.. +. .
T Consensus 426 ~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~--~ 500 (577)
T 2ymu_A 426 SSSVWGVAFSPDD-QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQ--L 500 (577)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SC--E
T ss_pred CCCeEEEEECCCC-CEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CC--E
Confidence 9999999999955 7899999999999999754311 1257889999999999852 22 2
Q ss_pred eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy9316 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234 (264)
Q Consensus 158 ~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~-~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d 234 (264)
...+.+|...|.+++|+|+ +.+|++++.||.|++||...... ....+.+.+.+++|+|||++|++++.|+.|++||
T Consensus 501 ~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 501 LQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 3456789999999999985 46889999999999999754332 2234567799999999999999999999999997
No 54
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.4e-26 Score=203.87 Aligned_cols=211 Identities=17% Similarity=0.155 Sum_probs=152.8
Q ss_pred CCeeEEEeecCceEEeccccc-------cccccccCCCCEEEEEECC--------CCCeEEEEECCCcEEEEEeccCCCC
Q psy9316 22 GSQFHLVCKIDDYVKHFNTHN-------DIKEYQAHGSKVHSVAWSC--------DGRRLASGSFDKSVAIFALDKKGDL 86 (264)
Q Consensus 22 ~~~~~~~~~~d~~~~~~~~~~-------~~~~~~~h~~~V~~l~~s~--------~g~~l~s~s~dg~i~v~~~~~~~~~ 86 (264)
.+.++.+++.|+.+++|+... .+..+.+|.+.|.+++|+| |+++|++||.|++|++||+...+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-- 177 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-- 177 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--
Confidence 345567789999999997543 2456789999999999997 88999999999999999986532
Q ss_pred cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-----------------------------------
Q psy9316 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------------------- 131 (264)
Q Consensus 87 ~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------------------- 131 (264)
....+..|...|.+++|+|.+.++|++++.||+|++||+++++.
T Consensus 178 -~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 178 -PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp -EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred -eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 22345678899999999998877899999999999999976431
Q ss_pred ----------ceEEEeecCCCcEEEEEeccCCCccce---------------EEEeccccceeeEEEcCC-CCCEEEEEe
Q psy9316 132 ----------QIMLASGSFDKSVAIFALDKKGDLNKE---------------VVYRGHTGSVDQLCWHAT-NPDLLSTAS 185 (264)
Q Consensus 132 ----------~~~~~~~~~d~~i~i~~~~~~~~~~~~---------------~~~~~h~~~i~~i~~~~~-~~~~i~s~~ 185 (264)
...+++++.|+.+.+|++......... ..............|+|. +..++++|+
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs 336 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS 336 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence 124678889999999997643221110 000111122223345543 444677888
Q ss_pred CCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 186 GDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 186 ~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.||.|++||+.+++... ..+...+.+++|+|||++||+++.+| +.+|.+.
T Consensus 337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 99999999999887532 34456789999999999999999666 5666543
No 55
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=4e-26 Score=194.87 Aligned_cols=193 Identities=21% Similarity=0.290 Sum_probs=155.3
Q ss_pred ccccccCCCCEEEEEECCC-CCeEEEEECCCcEEEEEeccCCCC--cccEEEecccccEEeEEEecCCCCeEEEEeCCCc
Q psy9316 44 IKEYQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALDKKGDL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 120 (264)
Q Consensus 44 ~~~~~~h~~~V~~l~~s~~-g~~l~s~s~dg~i~v~~~~~~~~~--~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~ 120 (264)
..++++|.+.|++|+|+|+ +++|++||.|++|++|++...... .....+.+|...|.+++|+|++ .++++++.|+.
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~ 109 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGT 109 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEccccc
Confidence 4468999999999999997 689999999999999998754322 1224567899999999999854 78999999999
Q ss_pred EEEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC-CCE
Q psy9316 121 VRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDL 180 (264)
Q Consensus 121 i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~-~~~ 180 (264)
|++|+...... ...+++++.|+.+.+|+..... .......+|...+..++|++.. ..+
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC--KYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc--eEEEEeccccCcccceEEccCCCCcE
Confidence 99999876432 1247889999999999864321 1222345788899999998764 357
Q ss_pred EEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 181 LSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+++++.|+.|++||+++.+.... .+.+.+.+++|+|++++|++|+.|+.|++||++...
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 88999999999999998875332 345678999999999999999999999999987643
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=1.3e-25 Score=200.56 Aligned_cols=224 Identities=18% Similarity=0.268 Sum_probs=177.5
Q ss_pred ceEeecCCCCCce-EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEe
Q psy9316 4 PVIQFHTPKSPEY-KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80 (264)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~ 80 (264)
+...|.++..+-. .+.+.+ ...++++.|+.+++|+. .+.+..+.+|.+.|.+++|+|++ +|++|+.||+|++|++
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEEECCSSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred ceEEEcCCCCCcEEEEEECC-CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 3445665555433 333444 46778999999999975 45677888999999999999988 9999999999999998
Q ss_pred ccCCCCcccEEEecccccEEeEEEecC-CCCeEEEEeCCCcEEEEECCCCCcc---------------------------
Q psy9316 81 DKKGDLNKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVRIWDARTQKSQ--------------------------- 132 (264)
Q Consensus 81 ~~~~~~~~~~~~~~h~~~v~~i~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~--------------------------- 132 (264)
... .....+.+|...|.+++|.+. +..++++++.||.|++||+++....
T Consensus 191 ~~~---~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 191 KKG---CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp TTT---EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred CCC---cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 642 233457789999999999863 4478999999999999999865311
Q ss_pred -------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q psy9316 133 -------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 199 (264)
Q Consensus 133 -------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~ 199 (264)
..+++++.|+.|.+|+++... ....+.+|...|.+++|+|+ +.++++++.||.|++||+++++
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK---CLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTTE
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCc
Confidence 257889999999999986432 23456789999999999985 5688999999999999999887
Q ss_pred ceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 200 SQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 200 ~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
.... .+...+.+++|+ +++|++|+.|+.|++||+++.
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCC
Confidence 5332 345567888887 689999999999999998764
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=2.4e-25 Score=188.33 Aligned_cols=207 Identities=18% Similarity=0.363 Sum_probs=157.4
Q ss_pred EEeecCceEEecccc--cccccc--ccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC----------------
Q psy9316 27 LVCKIDDYVKHFNTH--NDIKEY--QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL---------------- 86 (264)
Q Consensus 27 ~~~~~d~~~~~~~~~--~~~~~~--~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~---------------- 86 (264)
+..+.|+.|++|+.. +.++.+ .+|...|.+++|+|++++|++|+.||+|++|++......
T Consensus 39 lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~ 118 (318)
T 4ggc_A 39 LAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN 118 (318)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC
Confidence 445679999999753 445554 467788999999999999999999999999997642100
Q ss_pred ----------------------cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc------------
Q psy9316 87 ----------------------NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ------------ 132 (264)
Q Consensus 87 ----------------------~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~------------ 132 (264)
.....+.+|...+..+.+.+.+ .++++++.||.|++||+++++..
T Consensus 119 ~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 197 (318)
T 4ggc_A 119 SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 197 (318)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence 0112245677888888888754 68899999999999999864311
Q ss_pred --------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEE-EEeCCCcEEEEeCCC
Q psy9316 133 --------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDART 197 (264)
Q Consensus 133 --------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~-s~~~dg~i~iwD~~t 197 (264)
..+++++.++.|++|+...... .....+...+..+.|+|.+..+++ +++.||.|++||+++
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 1245678889999999764322 233456678999999987655543 344799999999999
Q ss_pred Cccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 198 QKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 198 ~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
++... ..+.+.+.+++|+|+|++|++|+.|+.|++||+.+.
T Consensus 274 ~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 274 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 87532 345677999999999999999999999999998764
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.3e-27 Score=212.45 Aligned_cols=205 Identities=8% Similarity=0.075 Sum_probs=156.7
Q ss_pred EEeecCceEEecccccc------ccccccCCCCEEEEEECCC------CCeEEEEECCCcEEEEEeccCCCC--------
Q psy9316 27 LVCKIDDYVKHFNTHND------IKEYQAHGSKVHSVAWSCD------GRRLASGSFDKSVAIFALDKKGDL-------- 86 (264)
Q Consensus 27 ~~~~~d~~~~~~~~~~~------~~~~~~h~~~V~~l~~s~~------g~~l~s~s~dg~i~v~~~~~~~~~-------- 86 (264)
.+++.|+.|++|+.... ...+.+|.+.|.+++|+|+ +.+|++++.||+|++|++......
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~ 256 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE 256 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence 45677999999975322 1235678899999999997 579999999999999998653211
Q ss_pred cccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------c-eEEEeecCCCc
Q psy9316 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------Q-IMLASGSFDKS 143 (264)
Q Consensus 87 ~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~-~~~~~~~~d~~ 143 (264)
.....+.+|...|.+++|++. ..|++|+.||+|++||++++.. . .++++++.|++
T Consensus 257 ~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 257 KPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp SCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred CceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 112356789999999999873 4799999999999999975321 1 35788999999
Q ss_pred EEEEEeccCCCccceEEEecccc--ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc--eeEeecCceEEEEEcCCCC
Q psy9316 144 VAIFALDKKGDLNKEVVYRGHTG--SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAPNGN 219 (264)
Q Consensus 144 i~i~~~~~~~~~~~~~~~~~h~~--~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~--~~~~~~~~~~~v~~sp~g~ 219 (264)
|+|||++.... ...+.+|.. .|.+++|+|+ ...+++++.|++|++||+++... .+..+.+.+.+|+|||+|+
T Consensus 335 vklWD~~~~~~---~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 335 FYIFNPKDIAT---TKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp EEEECGGGHHH---HCEEEEECSCCSCCCEEEETT-TTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred EEEEECCCCCc---ccccccccccCcccceEeCCC-cCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence 99999864321 123345543 4788999996 45788999999999999998764 3345667899999999999
Q ss_pred EEEEeeCCCeEEEEEccc
Q psy9316 220 TIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 220 ~la~gs~d~~i~~~d~~~ 237 (264)
+|++|+.|+.|++||+..
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 411 MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp BCEEEETTTEEECCBSCS
T ss_pred eEEEEECCCEEEEEechH
Confidence 999999999999999754
No 59
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=4.8e-26 Score=194.71 Aligned_cols=235 Identities=13% Similarity=0.112 Sum_probs=180.8
Q ss_pred CceEeecCCCeeEEEeecCceEEecccccc-----ccccccCCCCEEEEEECCCCC-eEEEEECCCcEEEEEe-ccCCCC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHND-----IKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFAL-DKKGDL 86 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~~~~h~~~V~~l~~s~~g~-~l~s~s~dg~i~v~~~-~~~~~~ 86 (264)
....+.|.+. ++++++.|+.+++|+.... ...+.+|...|.+++|+|+++ +|++|+.||.|++|++ ... .
T Consensus 15 ~~~~~s~~~~-~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~- 91 (342)
T 1yfq_A 15 SDIKIIPSKS-LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-S- 91 (342)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-S-
T ss_pred EEEEEcCCCC-EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-c-
Confidence 3346777665 5578899999999976422 455668999999999999999 9999999999999998 542 2
Q ss_pred cccEEEec--ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC---------CCc----------------ceEEEeec
Q psy9316 87 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDART---------QKS----------------QIMLASGS 139 (264)
Q Consensus 87 ~~~~~~~~--h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~---------~~~----------------~~~~~~~~ 139 (264)
...+.+ |...|.+++|+| +.++++++.|+.|++||+++ .+. ...+++++
T Consensus 92 --~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 167 (342)
T 1yfq_A 92 --FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM 167 (342)
T ss_dssp --EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEE
T ss_pred --eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEe
Confidence 244667 999999999998 57899999999999999875 321 01377889
Q ss_pred CCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC------ccee--EeecC----
Q psy9316 140 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ------KSQI--IATKG---- 207 (264)
Q Consensus 140 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~------~~~~--~~~~~---- 207 (264)
.|+.|.+|+++.............|...+.+++|+|.++.++++++.||.|++||++.. .... ..+..
T Consensus 168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKD 247 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTC
T ss_pred CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccc
Confidence 99999999987622222222345678899999999823468899999999999999876 3322 22222
Q ss_pred -----ceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCccc-ceeeeeec
Q psy9316 208 -----ENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH-LMETRSLW 259 (264)
Q Consensus 208 -----~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h-~~~~~~~~ 259 (264)
.+.+++|+|++++|++|+.|+.|++||+..+.. ..++.+| ...+.++-
T Consensus 248 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK----IKNFAKFNEDSVVKIA 301 (342)
T ss_dssp CSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE----EEECCCCSSSEEEEEE
T ss_pred cccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH----hhhhhcccCCCceEec
Confidence 688999999999999999999999999875432 3456777 77777653
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=4.7e-25 Score=187.55 Aligned_cols=211 Identities=19% Similarity=0.239 Sum_probs=173.1
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc----cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN----DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
..+.|.+. ..++++.|+.+++|+... ....+..|...|.+++|+|++++|++++.|+.|++|++... .....
T Consensus 103 ~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~---~~~~~ 178 (337)
T 1gxr_A 103 CKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQ 178 (337)
T ss_dssp EEECTTSS-EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEE
T ss_pred EEEcCCCC-EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---ceeee
Confidence 36666554 567788999999997643 34567789999999999999999999999999999998642 23345
Q ss_pred EecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------ceEEEeecCCCcEEEEEeccCC
Q psy9316 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------QIMLASGSFDKSVAIFALDKKG 153 (264)
Q Consensus 92 ~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------~~~~~~~~~d~~i~i~~~~~~~ 153 (264)
+..|...+.+++|+|++ .++++++.||.|++||+++++. ...+++++.++.+.+|+++...
T Consensus 179 ~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 179 FQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred eecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 67899999999999955 7888999999999999987542 1257788899999999986532
Q ss_pred CccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEE
Q psy9316 154 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTF 232 (264)
Q Consensus 154 ~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~ 232 (264)
...+..|...|..++|+|+ +.++++++.||.|++||+++++.... .+...+.+++|+|++++|++++.|+.|++
T Consensus 258 ----~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 332 (337)
T 1gxr_A 258 ----KYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332 (337)
T ss_dssp ----EEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred ----eEEEcCCccceeEEEECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEE
Confidence 2356788999999999985 56889999999999999999876433 34567889999999999999999999999
Q ss_pred EEcc
Q psy9316 233 IDVV 236 (264)
Q Consensus 233 ~d~~ 236 (264)
||+.
T Consensus 333 w~~~ 336 (337)
T 1gxr_A 333 YEVI 336 (337)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=4.1e-25 Score=187.95 Aligned_cols=216 Identities=13% Similarity=0.172 Sum_probs=168.7
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc-----cccccc--cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN-----DIKEYQ--AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~-----~~~~~~--~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
..+.|.+. +.++++ |+.+++|+... .+..+. .|...|.+++|+|++++|++++.|+.|++|++.... ...
T Consensus 57 ~~~~~~~~-~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~ 133 (337)
T 1gxr_A 57 VTISNPTR-HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-PRI 133 (337)
T ss_dssp EEECSSSS-EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EE
T ss_pred EEEecCCc-EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-cce
Confidence 36666554 455666 99999997643 222333 789999999999999999999999999999987532 223
Q ss_pred cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEe
Q psy9316 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFAL 149 (264)
Q Consensus 89 ~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~ 149 (264)
...+..|...|.+++|+|+ ++++++++.||.|++||+++++. ...+++++.|+.+.+|++
T Consensus 134 ~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 134 KAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeecccCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 3456789999999999985 47888999999999999987532 125788889999999998
Q ss_pred ccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-EeecCceEEEEEcCCCCEEEEeeCCC
Q psy9316 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-IATKGENINITWAPNGNTIAVGNKED 228 (264)
Q Consensus 150 ~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~~la~gs~d~ 228 (264)
+.... .....|...+..++|+|+ +.++++++.||.|++||+++.+... ..+...+.+++|+|++++|++++.|+
T Consensus 213 ~~~~~----~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 213 REGRQ----LQQHDFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp TTTEE----EEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCce----EeeecCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCC
Confidence 65322 122356788999999985 5788899999999999999877532 33456788999999999999999999
Q ss_pred eEEEEEcccCCC
Q psy9316 229 LVTFIDVVKSLP 240 (264)
Q Consensus 229 ~i~~~d~~~~~~ 240 (264)
.+++||+..+..
T Consensus 288 ~i~~~~~~~~~~ 299 (337)
T 1gxr_A 288 LLNAWRTPYGAS 299 (337)
T ss_dssp EEEEEETTTCCE
T ss_pred cEEEEECCCCeE
Confidence 999999876443
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=6.6e-26 Score=194.54 Aligned_cols=219 Identities=14% Similarity=0.247 Sum_probs=168.4
Q ss_pred eEeecCC--CeeEEEeecCceEEecccc--c-cccccccCCCCEEEEE------ECCCCCeEEEEECCCcEEEEEeccCC
Q psy9316 16 YKLLPSG--SQFHLVCKIDDYVKHFNTH--N-DIKEYQAHGSKVHSVA------WSCDGRRLASGSFDKSVAIFALDKKG 84 (264)
Q Consensus 16 ~~~~~~~--~~~~~~~~~d~~~~~~~~~--~-~~~~~~~h~~~V~~l~------~s~~g~~l~s~s~dg~i~v~~~~~~~ 84 (264)
..+.|.+ +.+.++++.|+.+++|+.. + .+..+.+|.+.|.++. |+|++++|++++.|+.|++|++....
T Consensus 71 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 71 GTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp EECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred EEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 3566653 4567789999999999764 3 5678889999999995 47899999999999999999987543
Q ss_pred CCcccEEEecccc----cEEeEE----EecCCCCeEEEEeCCCcEEEEECCCCC---------------------cceEE
Q psy9316 85 DLNKEVVYRGHTG----SVDQLC----WHATNPDLLSTASGDKTVRIWDARTQK---------------------SQIML 135 (264)
Q Consensus 85 ~~~~~~~~~~h~~----~v~~i~----~~~~~~~~l~s~s~dg~i~vwd~~~~~---------------------~~~~~ 135 (264)
.. ...+..|.+ .+.+++ |+| ++.++++++.||.|++||+++.+ ....+
T Consensus 151 ~~--~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 151 DP--VANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp SC--SEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEE
T ss_pred Cc--ceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEE
Confidence 22 233444443 788888 455 45789999999999999998753 22467
Q ss_pred EeecCCCcEEEEEeccCCCccce--EEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce------------
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNKE--VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ------------ 201 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~~--~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~------------ 201 (264)
++++.|+.|.+|+++........ ....+|...|.+++|+|++..++++++.||.|++||+++....
T Consensus 228 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~ 307 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGV 307 (357)
T ss_dssp EEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCC
T ss_pred EEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccc
Confidence 88899999999998764333221 1334899999999999976558999999999999999864321
Q ss_pred ---------eEeecCceEEEEEcCCCCEEE-EeeCCCeEEEEEccc
Q psy9316 202 ---------IIATKGENINITWAPNGNTIA-VGNKEDLVTFIDVVK 237 (264)
Q Consensus 202 ---------~~~~~~~~~~v~~sp~g~~la-~gs~d~~i~~~d~~~ 237 (264)
...+...+.+++|+|+|++|+ +|+.|+.|++||+.+
T Consensus 308 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 308 AGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred ccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 122345688999999999998 799999999999875
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.9e-26 Score=217.72 Aligned_cols=221 Identities=24% Similarity=0.345 Sum_probs=178.0
Q ss_pred eEeecCCCeeEEEeecCceEEecccc----ccccccccCCCCEEEEEECCC--CCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~h~~~V~~l~~s~~--g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
..+.|.+. ..++++.|+.+++|+.. ..+..+.+|.+.|.+++|+|+ +++|++|+.||.|++|++... .....
T Consensus 15 l~~s~dg~-~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~-~~~~~ 92 (753)
T 3jro_A 15 AVLDYYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RWSQI 92 (753)
T ss_dssp ECCCSSSC-CEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT-EEEEE
T ss_pred EEECCCCC-eEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC-ccccc
Confidence 35556664 56788899999999753 456778899999999999988 999999999999999998752 22233
Q ss_pred EEEecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc----------------------------------ceE
Q psy9316 90 VVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS----------------------------------QIM 134 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~----------------------------------~~~ 134 (264)
..+..|...|.+++|+|+. +.++++|+.||.|++||++.... ...
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 4567899999999999963 57899999999999999976511 235
Q ss_pred EEeecCCCcEEEEEeccCCCc-cceEEEeccccceeeEEEcCCC--CCEEEEEeCCCcEEEEeCCCCcc----e---eEe
Q psy9316 135 LASGSFDKSVAIFALDKKGDL-NKEVVYRGHTGSVDQLCWHATN--PDLLSTASGDKTVRIWDARTQKS----Q---IIA 204 (264)
Q Consensus 135 ~~~~~~d~~i~i~~~~~~~~~-~~~~~~~~h~~~i~~i~~~~~~--~~~i~s~~~dg~i~iwD~~t~~~----~---~~~ 204 (264)
+++|+.|+.|.+|+++..... .....+.+|..+|.+++|+|++ +.++++++.||.|++||+++... . ...
T Consensus 173 l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~ 252 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK 252 (753)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSC
T ss_pred EEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCC
Confidence 788899999999999765433 2234567899999999999974 68999999999999999998641 1 112
Q ss_pred ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 205 TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 205 ~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+...+.+++|+|+|+++++|+.||.|++||++.+
T Consensus 253 ~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 253 FPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 3456788999999999999999999999998853
No 64
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=1.9e-26 Score=205.26 Aligned_cols=220 Identities=15% Similarity=0.161 Sum_probs=164.0
Q ss_pred ceEeecCCCeeEEEeecCceEEeccccc----cccccccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTHN----DIKEYQAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
-..+.|+...++++++.||.|++|+... .+..+.+|.+.|.+|+|+| ++++|++|+.||+|++||+... ...
T Consensus 124 ~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~-~~~-- 200 (435)
T 4e54_B 124 SLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN-ILR-- 200 (435)
T ss_dssp EEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC-EEE--
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC-cee--
Confidence 3477788777788899999999997532 3345678999999999998 7899999999999999998631 111
Q ss_pred EEEe--cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEE
Q psy9316 90 VVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFA 148 (264)
Q Consensus 90 ~~~~--~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~ 148 (264)
.... .+...+.+++|+|++ .++++|+.||.|++||++.... ..++++++.|+.|.+||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred EEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEe
Confidence 1122 234457889999854 7899999999999999875321 12578899999999999
Q ss_pred eccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ec------CceEEEEEcCCCCE
Q psy9316 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TK------GENINITWAPNGNT 220 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~------~~~~~v~~sp~g~~ 220 (264)
++............+|...|.+++|+|+ +.+|++++.||.|+|||+++....... +. .....+.|+|++.+
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~spd-g~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFSPD-GARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL 358 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBCTT-SSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSC
T ss_pred cccccccceEEEeeeccccccceeECCC-CCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCE
Confidence 8765433333334678999999999985 578999999999999999987643221 11 12345677787777
Q ss_pred EEEee------------CCCeEEEEEcccCC
Q psy9316 221 IAVGN------------KEDLVTFIDVVKSL 239 (264)
Q Consensus 221 la~gs------------~d~~i~~~d~~~~~ 239 (264)
++++. .++.|++||+..+.
T Consensus 359 ~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 359 IVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp EEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 77664 34579999987643
No 65
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=205.37 Aligned_cols=193 Identities=17% Similarity=0.217 Sum_probs=151.9
Q ss_pred ccccccc-ccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEecc---CCCCcccEEEecccccEEeEEEecCCCCeEEEE
Q psy9316 41 HNDIKEY-QAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDK---KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA 115 (264)
Q Consensus 41 ~~~~~~~-~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~---~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~ 115 (264)
.+.+..+ .+|.+.|.+++|+| ++++|++|+.||+|++|++.. .........+ .|...|.+++|+| ++.+++++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~ 129 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP-NFDAFAVS 129 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-TSSEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-CCCEEEEE
Confidence 3456677 78999999999999 999999999999999999875 2212222223 5999999999998 44789999
Q ss_pred eCCCcEEEEECC---CC---------------------------------CcceEEEeecCCCcEEEEEeccCCCccceE
Q psy9316 116 SGDKTVRIWDAR---TQ---------------------------------KSQIMLASGSFDKSVAIFALDKKGDLNKEV 159 (264)
Q Consensus 116 s~dg~i~vwd~~---~~---------------------------------~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~ 159 (264)
+.||.|++||++ .+ .....+++++.|+.|.+|+++.... ..
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~ 206 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER---LQ 206 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE---EE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee---eE
Confidence 999999999984 11 1134688899999999999865432 23
Q ss_pred EEec--cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe---ecCceEEEEEc----CCCCEEEEeeCCCeE
Q psy9316 160 VYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA---TKGENINITWA----PNGNTIAVGNKEDLV 230 (264)
Q Consensus 160 ~~~~--h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~---~~~~~~~v~~s----p~g~~la~gs~d~~i 230 (264)
.+.. |...|.+++|+|+ +.+|++++.||.|++||+++++..... +...+.+++|+ |++++|++|+.|+.|
T Consensus 207 ~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 4455 8899999999985 678999999999999999987653322 23357788555 578899999999999
Q ss_pred EEEEcccCC
Q psy9316 231 TFIDVVKSL 239 (264)
Q Consensus 231 ~~~d~~~~~ 239 (264)
++||++.+.
T Consensus 286 ~iwd~~~~~ 294 (437)
T 3gre_A 286 TIWNFVKGH 294 (437)
T ss_dssp EEEETTTTE
T ss_pred EEEEcCCCc
Confidence 999987543
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.7e-25 Score=187.31 Aligned_cols=235 Identities=17% Similarity=0.150 Sum_probs=177.2
Q ss_pred eecCCCCCc--eEeecCCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEecc
Q psy9316 7 QFHTPKSPE--YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDK 82 (264)
Q Consensus 7 ~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~ 82 (264)
.|.++..+- ..+ |.+. ..++++.|+.+++|+.. .....+..|.+.|.+++|+|++++|++++.|+.|++|++..
T Consensus 13 ~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp EECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred HhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 344444433 244 5554 46789999999999753 45667889999999999999999999999999999999876
Q ss_pred CCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC------------------cceEEEeecCCCcE
Q psy9316 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK------------------SQIMLASGSFDKSV 144 (264)
Q Consensus 83 ~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~------------------~~~~~~~~~~d~~i 144 (264)
.........+..|...|.+++|. +.++++++.||.|++||..... ....+++++.|+.+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 91 TSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp CTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred cCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 44333345577899999999994 4689999999999999932210 12257888999999
Q ss_pred EEEEeccCCCccceEEEec-cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEE
Q psy9316 145 AIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTI 221 (264)
Q Consensus 145 ~i~~~~~~~~~~~~~~~~~-h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~l 221 (264)
.+|+.. .....+.. |...+.+++|+|.+. +++++.||.|++||+++.+... ..+...+.+++|+|++ .|
T Consensus 168 ~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 168 KLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp EEEETT-----EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred EEEecC-----ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 999832 12233444 888999999998653 8899999999999999887533 2355678999999999 68
Q ss_pred EEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 222 AVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 222 a~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
++++.|+.|++||++.+.. ..+..+|...+.++
T Consensus 240 ~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSL----KQVITLPAISIWSV 272 (313)
T ss_dssp EEEETTSEEEEECTTTCCE----EEEEECSSSCEEEE
T ss_pred EEEecCCEEEEEECCCCce----eEEEeccCceEEEE
Confidence 8999999999999876432 23445565555543
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=8.4e-26 Score=198.66 Aligned_cols=207 Identities=19% Similarity=0.356 Sum_probs=163.6
Q ss_pred eecCceEEecccc------ccccccccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCC----cccEEEecccc
Q psy9316 29 CKIDDYVKHFNTH------NDIKEYQAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDL----NKEVVYRGHTG 97 (264)
Q Consensus 29 ~~~d~~~~~~~~~------~~~~~~~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~----~~~~~~~~h~~ 97 (264)
++.++.+++|+.. ..+..+.+|.+.|.+++|+| ++++|++|+.||.|++|++...+.. .....+.+|..
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 6779999999753 24556789999999999999 9999999999999999998764321 23355788999
Q ss_pred cEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc---------------------eEEEeecCCCcEEEEEeccCCCcc
Q psy9316 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ---------------------IMLASGSFDKSVAIFALDKKGDLN 156 (264)
Q Consensus 98 ~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~---------------------~~~~~~~~d~~i~i~~~~~~~~~~ 156 (264)
.|.+++|+|++.+++++++.||.|++||+++++.. ..+++++.|+.|.+|+++...
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--- 209 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT--- 209 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE---
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc---
Confidence 99999999987679999999999999998765321 146788899999999986532
Q ss_pred ceEEE-eccccc-eeeEEEcCCCCCEEEEE---eCCCcEEEEeCCCCcc-e-eE--eecCceEEEEEcCCCCEEE-EeeC
Q psy9316 157 KEVVY-RGHTGS-VDQLCWHATNPDLLSTA---SGDKTVRIWDARTQKS-Q-II--ATKGENINITWAPNGNTIA-VGNK 226 (264)
Q Consensus 157 ~~~~~-~~h~~~-i~~i~~~~~~~~~i~s~---~~dg~i~iwD~~t~~~-~-~~--~~~~~~~~v~~sp~g~~la-~gs~ 226 (264)
....+ ..|... +..+.|+|+ +.+++++ +.|+.|++||+++... . .. .....+.+++|+|++++|+ +|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT
T ss_pred eeeeeccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC
Confidence 22234 567665 889999985 5688888 6899999999998653 1 12 2344578999999999996 4557
Q ss_pred CCeEEEEEcccCC
Q psy9316 227 EDLVTFIDVVKSL 239 (264)
Q Consensus 227 d~~i~~~d~~~~~ 239 (264)
|+.|++||+..+.
T Consensus 289 dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 289 DSSIRYFEITSEA 301 (402)
T ss_dssp CSCEEEEEECSST
T ss_pred CCeEEEEEecCCC
Confidence 9999999998654
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=6.6e-26 Score=213.03 Aligned_cols=216 Identities=21% Similarity=0.334 Sum_probs=162.8
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
....+.|.+. ++++++.|+.+++|+.. ..++.+.+|.+.|.+++|+|++++|++|+.|++|++|++...........
T Consensus 434 ~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~ 512 (694)
T 3dm0_A 434 EDVVLSSDGQ-FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 512 (694)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccC
Confidence 4446666664 56789999999999764 45678899999999999999999999999999999998642111000001
Q ss_pred EecccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEecc
Q psy9316 92 YRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDK 151 (264)
Q Consensus 92 ~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~ 151 (264)
..+|...|.+++|+|.+ ...+++++.|+.|++||+++.+. ...+++++.|+.|++|+++.
T Consensus 513 ~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 513 GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 23688899999999865 35789999999999999987542 12578999999999999865
Q ss_pred CCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee------------------c---CceE
Q psy9316 152 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT------------------K---GENI 210 (264)
Q Consensus 152 ~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~------------------~---~~~~ 210 (264)
.... ....+...|.+++|+|+ +.+++++ .++.|++||++++....... . ..+.
T Consensus 593 ~~~~----~~~~~~~~v~~~~~sp~-~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (694)
T 3dm0_A 593 GKKL----YSLEANSVIHALCFSPN-RYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCT 666 (694)
T ss_dssp TEEE----ECCBCSSCEEEEEECSS-SSEEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEE
T ss_pred CceE----EEecCCCcEEEEEEcCC-CcEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEee
Confidence 4321 11234568999999985 4566554 56779999999876422110 0 0246
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 211 NITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 211 ~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+++|+|+|++|++|+.|+.|++||+.
T Consensus 667 ~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 667 SLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 79999999999999999999999975
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=9.8e-25 Score=193.26 Aligned_cols=222 Identities=21% Similarity=0.382 Sum_probs=175.5
Q ss_pred EEeecCceEEecccc--cccccc--ccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeE
Q psy9316 27 LVCKIDDYVKHFNTH--NDIKEY--QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102 (264)
Q Consensus 27 ~~~~~d~~~~~~~~~--~~~~~~--~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i 102 (264)
+..+.|+.|++|+.. +..+.+ .+|.+.|++++|+|+|++|++|+.||+|++|++... .....+.+|...+.++
T Consensus 119 lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~---~~~~~~~~h~~~v~~~ 195 (420)
T 4gga_A 119 LAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---KRLRNMTSHSARVGSL 195 (420)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEE
T ss_pred EEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---cEEEEEeCCCCceEEE
Confidence 445679999999764 344444 467788999999999999999999999999998642 2334577899999999
Q ss_pred EEecCCCCeEEEEeCCCcEEEEECCCCCc--------------------ceEEEeecCCCcEEEEEeccCCCc-cceEEE
Q psy9316 103 CWHATNPDLLSTASGDKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDKKGDL-NKEVVY 161 (264)
Q Consensus 103 ~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------~~~~~~~~~d~~i~i~~~~~~~~~-~~~~~~ 161 (264)
+|+ +.++++|+.|+.+++||.+.... ...+++++.|+.+.+|+....... ......
T Consensus 196 s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 196 SWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp EEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEE
T ss_pred eeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeee
Confidence 885 36899999999999999876432 125788999999999998654322 223456
Q ss_pred eccccceeeEEEcCCCCCEEEEE--eCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEee--CCCeEEEEEcc
Q psy9316 162 RGHTGSVDQLCWHATNPDLLSTA--SGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGN--KEDLVTFIDVV 236 (264)
Q Consensus 162 ~~h~~~i~~i~~~~~~~~~i~s~--~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs--~d~~i~~~d~~ 236 (264)
..|...|.+++|+|.+..+++++ +.|++|++||++++..... .....+.++.|+|+++.+++++ .|+.|++||+.
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 78889999999999888888764 4799999999999876433 3455688899999999998765 78999999987
Q ss_pred cCCCCCCCcccCcccceeeeee
Q psy9316 237 KSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 237 ~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
++ +...+++||...|.+|
T Consensus 353 ~~----~~v~~l~gH~~~V~~l 370 (420)
T 4gga_A 353 TM----AKVAELKGHTSRVLSL 370 (420)
T ss_dssp TC----CEEEEECCCSSCEEEE
T ss_pred CC----cEEEEEcCCCCCEEEE
Confidence 54 3456788999888876
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-24 Score=186.66 Aligned_cols=230 Identities=13% Similarity=0.186 Sum_probs=181.7
Q ss_pred eEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~ 93 (264)
..+.|.+. ++++++.|+.+++|+. .+.+..+.+|.+.|.+++|+|++++|++++.|+.|++|++.... ....+.
T Consensus 38 ~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~ 113 (369)
T 3zwl_B 38 VKYNKEGD-LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ---CVATWK 113 (369)
T ss_dssp EEECTTSC-EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC---EEEEEE
T ss_pred EEEcCCCC-EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEee
Confidence 36667654 5678899999999964 46677888999999999999999999999999999999986532 222333
Q ss_pred cccccEEeEEEecCCCCeEEEEeCC-----CcEEEEECCCCCc--------------------------------ceEEE
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGD-----KTVRIWDARTQKS--------------------------------QIMLA 136 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~d-----g~i~vwd~~~~~~--------------------------------~~~~~ 136 (264)
+...+.+++|+|++ .++++++.+ |.+++||++.... ...++
T Consensus 114 -~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 114 -SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp -CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred -cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 78899999999955 688888888 9999999875421 12578
Q ss_pred eecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEc
Q psy9316 137 SGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWA 215 (264)
Q Consensus 137 ~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~s 215 (264)
+++.|+.|.+|+++... .....+..|...|.+++|+|+ +.+|++++.||.|++||+++.+.... .....+..++|+
T Consensus 192 ~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 268 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNY--EYVDSIDLHEKSISDMQFSPD-LTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVIT 268 (369)
T ss_dssp EEETTSEEEEEETTTTT--EEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred EEcCCCEEEEEECCCCc--EeEEEEecCCCceeEEEECCC-CCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEec
Confidence 88999999999986532 223456778899999999985 57889999999999999999875333 345668899999
Q ss_pred CCCCEEEEeeCCC--------------eEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 216 PNGNTIAVGNKED--------------LVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 216 p~g~~la~gs~d~--------------~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
|+++++++++.++ .+++||+..+. ......+|...++++
T Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 269 PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE----EIGRVQGHFGPLNTV 321 (369)
T ss_dssp SSSSEEEEEECCC-------------CEEEEEETTTCC----EEEEEECCSSCEEEE
T ss_pred CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc----chhheecccCcEEEE
Confidence 9999999999998 89999976543 334556777666654
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=3.9e-25 Score=194.56 Aligned_cols=221 Identities=22% Similarity=0.343 Sum_probs=172.5
Q ss_pred EEEeecCceEEecccc--cccccccc-CCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeE
Q psy9316 26 HLVCKIDDYVKHFNTH--NDIKEYQA-HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102 (264)
Q Consensus 26 ~~~~~~d~~~~~~~~~--~~~~~~~~-h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i 102 (264)
.++++.|+.+++|+.. +....+.. |.+.|.+++|+|++++|++|+.||.|++|++... .....+.+|...|.++
T Consensus 106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ---TKLRTMAGHQARVGCL 182 (401)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEE
T ss_pred EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC---eEEEEecCCCCceEEE
Confidence 5678899999999763 34444444 8899999999999999999999999999998643 2234567899999999
Q ss_pred EEecCCCCeEEEEeCCCcEEEEECCCCCc--------------------ceEEEeecCCCcEEEEEeccCCCccceEEEe
Q psy9316 103 CWHATNPDLLSTASGDKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYR 162 (264)
Q Consensus 103 ~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~ 162 (264)
+|+ ++++++++.||.|++||++.... ...+++++.|+.|.+|+++... ....+.
T Consensus 183 ~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~ 256 (401)
T 4aez_A 183 SWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI---PKFTKT 256 (401)
T ss_dssp EEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS---EEEEEC
T ss_pred EEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC---ccEEec
Confidence 995 36899999999999999984321 1257889999999999987532 233566
Q ss_pred ccccceeeEEEcCCCCCEEEEEe--CCCcEEEEeCCCCccee-EeecCceEEEEEcCCCCEEEE--eeCCCeEEEEEccc
Q psy9316 163 GHTGSVDQLCWHATNPDLLSTAS--GDKTVRIWDARTQKSQI-IATKGENINITWAPNGNTIAV--GNKEDLVTFIDVVK 237 (264)
Q Consensus 163 ~h~~~i~~i~~~~~~~~~i~s~~--~dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~~la~--gs~d~~i~~~d~~~ 237 (264)
.|...|.+++|+|.+..++++++ .||.|++||+++++... ......+.+++|+|+++++++ |+.|+.|++||+..
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 88999999999998888988876 79999999999887533 334567889999999999999 55899999999876
Q ss_pred CCCCCCCcccCcccceeeee
Q psy9316 238 SLPPRERTLTSRGHLMETRS 257 (264)
Q Consensus 238 ~~~~~~~~~~~~~h~~~~~~ 257 (264)
+... ......+|...+.+
T Consensus 337 ~~~~--~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 337 SGLT--KQVDIPAHDTRVLY 354 (401)
T ss_dssp TEEE--EEEEEECCSSCCCE
T ss_pred ccce--eEEEecCCCCCEEE
Confidence 3222 12234466655554
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=2e-25 Score=194.64 Aligned_cols=219 Identities=12% Similarity=0.121 Sum_probs=164.5
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc--cccccc--ccCCCCEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEY--QAHGSKVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~--~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
....+.|.+..++++++.|+.+++|+.. +....+ .+|.+.|.+++|+| ++++|++++.|+.|++|++.. . .
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~---~ 152 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-S---V 152 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-C---E
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-C---c
Confidence 3346777775677889999999999765 333334 36999999999999 789999999999999999863 2 1
Q ss_pred cEEEe---cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc------------------ce-EEEeecCCCcEEE
Q psy9316 89 EVVYR---GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS------------------QI-MLASGSFDKSVAI 146 (264)
Q Consensus 89 ~~~~~---~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------~~-~~~~~~~d~~i~i 146 (264)
...+. .|...|.+++|+|++ .++++++.||.|++||++.... .. .+++++.|+.|.+
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 12233 345789999999955 7899999999999999854211 11 6889999999999
Q ss_pred EEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--Eeec-----------------C
Q psy9316 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATK-----------------G 207 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~-----------------~ 207 (264)
|+++............+|...|.+++|+|.++.+|++++.||.|++||+++.+... ..+. +
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCC
Confidence 99986433222233347899999999998456789999999999999999876421 1111 2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 208 ENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 208 ~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
....++|+|+|++ +|+.|+.|++||+..+.
T Consensus 312 ~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 312 DLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp SEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred CceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 2344667777777 77899999999987644
No 73
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=4.1e-26 Score=199.10 Aligned_cols=197 Identities=13% Similarity=0.147 Sum_probs=145.1
Q ss_pred EeecCCCeeEE-EeecCceEEeccccc--cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe
Q psy9316 17 KLLPSGSQFHL-VCKIDDYVKHFNTHN--DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93 (264)
Q Consensus 17 ~~~~~~~~~~~-~~~~d~~~~~~~~~~--~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~ 93 (264)
.|.|.|..+.+ +++.|+.+++|+..+ .+..+ .|.+.|.+++|+|||++|++++.|+ +.+|+... +.........
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~-~~~~~~~~~~ 216 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVT-GSCIARKTDF 216 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTT-CCEEEEECCC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccCCceEEecccee-EEEEEecc-CcceeeeecC
Confidence 45566654332 345799999998654 34444 4778899999999999999998654 56665443 2222222345
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCC----cEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEecccccee
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDK----TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg----~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
.|...|.+++|+|++ .++++++.|+ .+++||+....... .....+.+|..+|.
T Consensus 217 ~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~----------------------~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 217 DKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSV----------------------LRSKQVTNRFKGIT 273 (365)
T ss_dssp CTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEE----------------------EEEEEEESSCSCEE
T ss_pred CCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecc----------------------eeeeeecCCCCCeE
Confidence 688899999999965 6777888776 57778876432211 01124567888999
Q ss_pred eEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE---eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 170 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~---~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
+++|+|+ +.+||+|+.|++|+|||+++++.... .+...+.+++|||||++||+||.|++|+|||+.....
T Consensus 274 ~~~~Spd-g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 274 SMDVDMK-GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred eEEECCC-CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 9999985 57999999999999999999875332 3566799999999999999999999999999865433
No 74
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=3.9e-25 Score=192.96 Aligned_cols=210 Identities=16% Similarity=0.214 Sum_probs=166.6
Q ss_pred eeEEEeecCceEEeccccc--------cccccccCCCCEEEEEECCC----C---CeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 24 QFHLVCKIDDYVKHFNTHN--------DIKEYQAHGSKVHSVAWSCD----G---RRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~~~--------~~~~~~~h~~~V~~l~~s~~----g---~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
.++++++.|+.+++|+... .+..+.+|...|.+++|+|+ + ++|++++.|+.|++|++........
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 5677899999999997642 46778899999999999999 9 9999999999999999876432110
Q ss_pred --cEEEecc-----cccEEeEEEe----cCCCCe-EEEEeCCCcEEEEECCC------CCcce-----------------
Q psy9316 89 --EVVYRGH-----TGSVDQLCWH----ATNPDL-LSTASGDKTVRIWDART------QKSQI----------------- 133 (264)
Q Consensus 89 --~~~~~~h-----~~~v~~i~~~----~~~~~~-l~s~s~dg~i~vwd~~~------~~~~~----------------- 133 (264)
...+..| ...|.+++|+ |++ .+ +++++.||.|++||+++ .+...
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 185 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCC
Confidence 2345677 5899999999 755 66 88999999999999876 21110
Q ss_pred -------------EEEeecCCCcEEEEEeccCCCccceEEEec---c---ccceeeEEEcCCCCCEEEEEeCC---CcEE
Q psy9316 134 -------------MLASGSFDKSVAIFALDKKGDLNKEVVYRG---H---TGSVDQLCWHATNPDLLSTASGD---KTVR 191 (264)
Q Consensus 134 -------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~---h---~~~i~~i~~~~~~~~~i~s~~~d---g~i~ 191 (264)
.+++++.|+.|.+|+++... ....+.. | ...|.+++|+|+ +.+|++++.| |.|+
T Consensus 186 ~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 186 SQFATSVDISERGLIATGFNNGTVQISELSTLR---PLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp CCCCCEEEECTTSEEEEECTTSEEEEEETTTTE---EEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEE
T ss_pred CCCceEEEECCCceEEEEeCCCcEEEEECCCCc---eeEEEeccccccccCCccceEEECCC-CCEEEEEecCCCCceEE
Confidence 57788899999999986532 2334566 8 889999999985 5788999999 9999
Q ss_pred EEeCCCCcceeE--e-------------ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 192 IWDARTQKSQII--A-------------TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 192 iwD~~t~~~~~~--~-------------~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+||+++.+.... . +...+.+++|+|++++|++|+.|+.|++||++.+
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999998775322 2 4567889999999999999999999999998764
No 75
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=2.5e-25 Score=197.91 Aligned_cols=213 Identities=22% Similarity=0.359 Sum_probs=167.8
Q ss_pred ccccCCCCEEEEEECCC-CCeEEEEECCCcEEEEEeccC-------CCCcccEEEecccccEEeEEEecCCCCeEEEEeC
Q psy9316 46 EYQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALDKK-------GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 117 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~-g~~l~s~s~dg~i~v~~~~~~-------~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~ 117 (264)
....|.+.|++++|+|+ +++|++++.||.|++|++... +.......+.+|...|.+++|+|.+..+|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 44589999999999997 789999999999999998752 2233445678999999999999977669999999
Q ss_pred CCcEEEEECCCCCc---------------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceee
Q psy9316 118 DKTVRIWDARTQKS---------------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170 (264)
Q Consensus 118 dg~i~vwd~~~~~~---------------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~ 170 (264)
||.|++||++.... ...+++++.|+.|.+|+++..........+..|...|.+
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 99999999986211 125788899999999999865423333456789999999
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCCCc-c--eeEeecCceEEEEEcCCCC-EEEEeeCCCeEEEEEcccCCCC-----
Q psy9316 171 LCWHATNPDLLSTASGDKTVRIWDARTQK-S--QIIATKGENINITWAPNGN-TIAVGNKEDLVTFIDVVKSLPP----- 241 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg~i~iwD~~t~~-~--~~~~~~~~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~~~~~----- 241 (264)
++|+|.+..++++++.||.|++||+++.. . ....+...+.+++|+|+++ +|++++.|+.|++||++.....
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence 99999877789999999999999999843 2 2233566789999999995 6899999999999999873321
Q ss_pred -----CCCcccCcccceeeeee
Q psy9316 242 -----RERTLTSRGHLMETRSL 258 (264)
Q Consensus 242 -----~~~~~~~~~h~~~~~~~ 258 (264)
.+......||...++++
T Consensus 363 ~~~~~~~~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 363 AEDGPPELLFIHGGHTAKISDF 384 (430)
T ss_dssp HHHCCTTEEEECCCCSSCEEEE
T ss_pred cccCCcceEEEcCCCCCCceEE
Confidence 13334556777666654
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=3.8e-26 Score=196.52 Aligned_cols=237 Identities=19% Similarity=0.298 Sum_probs=175.8
Q ss_pred eEeecC---CCeeEEEeecCceEEecccc--cccccccc-----CCCCEEEEEECCC----CCeEEEEECCCcEEEEEec
Q psy9316 16 YKLLPS---GSQFHLVCKIDDYVKHFNTH--NDIKEYQA-----HGSKVHSVAWSCD----GRRLASGSFDKSVAIFALD 81 (264)
Q Consensus 16 ~~~~~~---~~~~~~~~~~d~~~~~~~~~--~~~~~~~~-----h~~~V~~l~~s~~----g~~l~s~s~dg~i~v~~~~ 81 (264)
..+.|. +....+++..++.+++|+.. +.++.+.. |.+.|.+++|+|+ +++|++|+.||.|++|++.
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 103 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI 103 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT
T ss_pred EEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch
Confidence 367763 45556677778889998754 33444443 6678999999998 6799999999999999986
Q ss_pred cCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc----------------------ceEEEeec
Q psy9316 82 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------QIMLASGS 139 (264)
Q Consensus 82 ~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~----------------------~~~~~~~~ 139 (264)
.. .....+.+|...|.+++|+|.++.++++++.||.|++||+++++. ...+++++
T Consensus 104 ~~---~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 104 TM---QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp TC---CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE
T ss_pred hc---eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec
Confidence 42 223457789999999999996668999999999999999986431 12578889
Q ss_pred CCCcEEEEEeccCCCcc-------------------------ceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEe
Q psy9316 140 FDKSVAIFALDKKGDLN-------------------------KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194 (264)
Q Consensus 140 ~d~~i~i~~~~~~~~~~-------------------------~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD 194 (264)
.|+.|.+|+++...... .......|...|.+++|+ +.++++++.||.|++||
T Consensus 181 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd 257 (366)
T 3k26_A 181 MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWK 257 (366)
T ss_dssp TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEE
T ss_pred CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEe
Confidence 99999999986421110 011223488899999997 46899999999999999
Q ss_pred CCCCcc------------e-e---EeecCceEEEEEcCC--CCEEEEeeCCCeEEEEEcccCCCCCCCcccCccc--cee
Q psy9316 195 ARTQKS------------Q-I---IATKGENINITWAPN--GNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH--LME 254 (264)
Q Consensus 195 ~~t~~~------------~-~---~~~~~~~~~v~~sp~--g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h--~~~ 254 (264)
+++... . . ..+...+.+++|+|+ +++|++|+.|+.|++||+..+........++.+| ...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 337 (366)
T 3k26_A 258 PGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAA 337 (366)
T ss_dssp ESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSC
T ss_pred CCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCc
Confidence 987643 1 1 112345677899999 9999999999999999998765544344456666 455
Q ss_pred eeee
Q psy9316 255 TRSL 258 (264)
Q Consensus 255 ~~~~ 258 (264)
+++|
T Consensus 338 v~~~ 341 (366)
T 3k26_A 338 IRQT 341 (366)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5543
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=5.3e-25 Score=187.10 Aligned_cols=194 Identities=23% Similarity=0.371 Sum_probs=154.8
Q ss_pred cccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC-cccEEEecccccEEeEEEecC-CCCeEEEEeCCCcEE
Q psy9316 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL-NKEVVYRGHTGSVDQLCWHAT-NPDLLSTASGDKTVR 122 (264)
Q Consensus 45 ~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~-~~~~~~~~h~~~v~~i~~~~~-~~~~l~s~s~dg~i~ 122 (264)
+.+.+|.+.|.+++|+|++++|++|+.||.|++|++...... .....+.+|...|.+++|+|. ++.+|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 345799999999999999999999999999999999753321 223446789999999999985 468999999999999
Q ss_pred EEECCCCC----------------------------c--ceEEEeecCCCcEEEEEeccCCCccceE----------EEe
Q psy9316 123 IWDARTQK----------------------------S--QIMLASGSFDKSVAIFALDKKGDLNKEV----------VYR 162 (264)
Q Consensus 123 vwd~~~~~----------------------------~--~~~~~~~~~d~~i~i~~~~~~~~~~~~~----------~~~ 162 (264)
+||++.++ . ...+++++.|+.|.+|+++......... ...
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99997641 1 2357888999999999987654332211 012
Q ss_pred ccccceeeEEEcCC--CCCEEEEEeCCCcEEEEeCCCCcceeE----eecCceEEEEEcCCC----CEEEEeeCCCeEEE
Q psy9316 163 GHTGSVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQKSQII----ATKGENINITWAPNG----NTIAVGNKEDLVTF 232 (264)
Q Consensus 163 ~h~~~i~~i~~~~~--~~~~i~s~~~dg~i~iwD~~t~~~~~~----~~~~~~~~v~~sp~g----~~la~gs~d~~i~~ 232 (264)
.|...+.++.|+|. ++.++++++.|+.+.+|+......... .+...+.+++|+|++ ++|++|+.|+.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 57788999999996 467999999999998888877664221 235578899999998 89999999999999
Q ss_pred EEcccC
Q psy9316 233 IDVVKS 238 (264)
Q Consensus 233 ~d~~~~ 238 (264)
||++.+
T Consensus 245 wd~~~~ 250 (351)
T 3f3f_A 245 FKITEK 250 (351)
T ss_dssp EEEEEC
T ss_pred EeCCCC
Confidence 999874
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=5.9e-25 Score=189.83 Aligned_cols=205 Identities=18% Similarity=0.258 Sum_probs=159.3
Q ss_pred cccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEEC
Q psy9316 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126 (264)
Q Consensus 47 ~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~ 126 (264)
+..|.++|.+++|+|++++|++++.|+.|++|++... .......+.+|...|.+++|+|+ +.++++++.||.|++||+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-EEEEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-cEEeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEEEC
Confidence 4568999999999999999999999999999998752 22233457789999999999994 478999999999999998
Q ss_pred CCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccceE-EEeccccceeeEEEcCCCCCEEEEE
Q psy9316 127 RTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTA 184 (264)
Q Consensus 127 ~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~-~~~~h~~~i~~i~~~~~~~~~i~s~ 184 (264)
++++. ...+++++.|+.+.+|+++......... ....|...|.+++|+|+ +.+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~ 160 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN-SVLLAAG 160 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT-SSEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC-CCEEEEE
Confidence 76531 1257888999999999998654322222 23568889999999985 5788999
Q ss_pred eCCCcEEEEeCC------------------CCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCC
Q psy9316 185 SGDKTVRIWDAR------------------TQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244 (264)
Q Consensus 185 ~~dg~i~iwD~~------------------t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~ 244 (264)
+.||.|++||++ +++.... .+...+.+++|+|++++|++++.|+.|++||++.+..
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---- 236 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA---- 236 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE----
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce----
Confidence 999999999965 2332211 2345688999999999999999999999999986432
Q ss_pred cccCcccceeeeee
Q psy9316 245 TLTSRGHLMETRSL 258 (264)
Q Consensus 245 ~~~~~~h~~~~~~~ 258 (264)
..++.+|...++++
T Consensus 237 ~~~~~~~~~~v~~~ 250 (372)
T 1k8k_C 237 VATLASETLPLLAV 250 (372)
T ss_dssp EEEEECSSCCEEEE
T ss_pred eEEEccCCCCeEEE
Confidence 23455666555544
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-24 Score=189.31 Aligned_cols=231 Identities=15% Similarity=0.226 Sum_probs=175.8
Q ss_pred CceEeecCCCeeEEEeecCceEEeccc----ccc--------cccccc----------CCCCEEEEEECCCCCeEEEEEC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNT----HND--------IKEYQA----------HGSKVHSVAWSCDGRRLASGSF 71 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~--------~~~~~~----------h~~~V~~l~~s~~g~~l~s~s~ 71 (264)
....+.|.+..+.++++.|+.+++|+. ... ...+.. |.+.|.+++|+|++++|++|+.
T Consensus 49 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 49 VSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp SEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC
Confidence 444777777646678899999999977 322 222222 6789999999999999999999
Q ss_pred CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------
Q psy9316 72 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ------------------- 132 (264)
Q Consensus 72 dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~------------------- 132 (264)
||.|++|+.. + .....+..|...|.+++|+|++ .++++++.||.+++||+++++..
T Consensus 129 dg~i~i~~~~--~--~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (425)
T 1r5m_A 129 NGELRLWNKT--G--ALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHS 203 (425)
T ss_dssp TSCEEEEETT--S--CEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC-------------
T ss_pred CCeEEEEeCC--C--CeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecccc
Confidence 9999999832 2 2234567899999999999855 68889999999999999765321
Q ss_pred --------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q psy9316 133 --------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198 (264)
Q Consensus 133 --------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~ 198 (264)
..+++++.++.|.+|+++.... ...+..|...|.+++|+|+ +.+|++++.||.|++||+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 204 GDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP---TGKLIGHHGPISVLEFNDT-NKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp --CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC---SEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEEECSSSB
T ss_pred CCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce---eeeeccCCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCC
Confidence 1367788899999999875432 2345688999999999985 468899999999999999987
Q ss_pred cceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 199 KSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 199 ~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+.... .+...+.+++|+|++ ++++++.|+.|++||++.+.. .....+|...+.++
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~ 336 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL----LALSIVDGVPIFAG 336 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----EEEEECTTCCEEEE
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----eEecccCCccEEEE
Confidence 64332 345678899999999 999999999999999875432 23344555555443
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=6e-25 Score=193.35 Aligned_cols=231 Identities=12% Similarity=0.146 Sum_probs=169.4
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc--cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN--DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~ 93 (264)
..+.|.+. ..++++.|+.+++|+... ....+..| ..+....|+|++++|++|+.|+.|++|++... .....+.
T Consensus 62 ~~~s~~g~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~ 136 (420)
T 3vl1_A 62 NTFEKVGS-HLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN---LQREIDQ 136 (420)
T ss_dssp CEEEEEET-TEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC---EEEEETT
T ss_pred eeeeecCC-eEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc---ceeeecc
Confidence 45666665 356788899999997643 44455555 44555578999999999999999999987632 2223456
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCC
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGD 154 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~ 154 (264)
+|...|.+++|+|++ .+|++++.||.|++||+++++.. ..+++++.|+.|.+|+++....
T Consensus 137 ~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 137 AHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp SSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred cccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 899999999999954 68999999999999999875421 2578899999999999865322
Q ss_pred ccceEEEe---ccc---------------------cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe---ecC
Q psy9316 155 LNKEVVYR---GHT---------------------GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA---TKG 207 (264)
Q Consensus 155 ~~~~~~~~---~h~---------------------~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~---~~~ 207 (264)
. ..+. .|. ..+..++|+| ++.+|++++.||.|++||+++.+..... +..
T Consensus 216 ~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 216 I---HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp E---EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred e---EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 1 1222 222 3455555666 4568899999999999999988754333 235
Q ss_pred ceEEEEEcCCCC-EEEEeeCCCeEEEEEcccCCCCCCCcccCcc-cceeeeeec
Q psy9316 208 ENINITWAPNGN-TIAVGNKEDLVTFIDVVKSLPPRERTLTSRG-HLMETRSLW 259 (264)
Q Consensus 208 ~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~-h~~~~~~~~ 259 (264)
.+.+++|+|+++ +|++|+.|+.|++||++.+..+ ..++.+ |...++++|
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~~~~~~v~~~~ 342 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP---VGEFLINEGTPINNVY 342 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---SEEEEESTTSCEEEEE
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc---hhhhhccCCCCceEEE
Confidence 688999999999 9999999999999999865332 223444 555566654
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.4e-25 Score=202.14 Aligned_cols=218 Identities=11% Similarity=0.057 Sum_probs=164.0
Q ss_pred CceEeecCC-----CeeEEEeecCceEEecccccc-------------ccccccCCCCEEEEEECCCCCeEEEEECCCcE
Q psy9316 14 PEYKLLPSG-----SQFHLVCKIDDYVKHFNTHND-------------IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSV 75 (264)
Q Consensus 14 ~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~-------------~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i 75 (264)
....+.|.+ +.++++++.|+.+++|+.... ..++.+|.+.|.+++|+++ ..|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEE
Confidence 445777752 356778999999999976432 2357789999999999986 489999999999
Q ss_pred EEEEeccCCCCcccEEEecccccEEeEE--EecCCCCeEEEEeCCCcEEEEECCCCCc---------------------c
Q psy9316 76 AIFALDKKGDLNKEVVYRGHTGSVDQLC--WHATNPDLLSTASGDKTVRIWDARTQKS---------------------Q 132 (264)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~h~~~v~~i~--~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~ 132 (264)
++||+..... ....+.+|...|.+++ |.+++.++|+++|.|++|++||+++.+. .
T Consensus 290 ~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 290 AEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT
T ss_pred EEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc
Confidence 9999875321 2234778999999994 4553337899999999999999865210 1
Q ss_pred eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce-----------
Q psy9316 133 IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ----------- 201 (264)
Q Consensus 133 ~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~----------- 201 (264)
..+++++.|++|++|+++..... ..+.+|...|.+++|+|++ .+|++|+.||+|++||+..+...
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~ 443 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAAFAV---HPLVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARRLLHGIKNSSATQKS 443 (524)
T ss_dssp TEEEEECSSSEEEEEETTCTTCC---EEEEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSSTTTCC------CCC
T ss_pred CeEEEeCCCCcEEEEECcccccc---eeeecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHhhccccccCccceee
Confidence 14678889999999998754322 3467899999999999964 57889999999999997432100
Q ss_pred --e-E--------------------------------eecCceEEEEEcCCCC---EEEEeeCCCeEEEEEcccC
Q psy9316 202 --I-I--------------------------------ATKGENINITWAPNGN---TIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 202 --~-~--------------------------------~~~~~~~~v~~sp~g~---~la~gs~d~~i~~~d~~~~ 238 (264)
. . .+...+.+|+|+|++. ++|+|+.||+|+||++...
T Consensus 444 ~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 444 LRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 0 0 0112356799999964 9999999999999998753
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=2.5e-24 Score=191.33 Aligned_cols=225 Identities=20% Similarity=0.279 Sum_probs=176.1
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
.+-+ ++...++++.|+.+++|+. .+....+.+|.+.|.+++| ++++|++|+.||.|++|++.... ....+.+
T Consensus 138 ~~~~-d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~ 211 (435)
T 1p22_A 138 CLQY-DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE---MLNTLIH 211 (435)
T ss_dssp EEEC-CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC---EEEEECC
T ss_pred EEEE-CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc---EEEEEcC
Confidence 3444 4456678999999999975 4567788899999999998 78999999999999999986532 2345678
Q ss_pred ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc--------------------eEEEeecCCCcEEEEEeccCCC
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ--------------------IMLASGSFDKSVAIFALDKKGD 154 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~--------------------~~~~~~~~d~~i~i~~~~~~~~ 154 (264)
|...|.+++|++ ..+++++.||.|++||+++.... ..+++++.|+.|.+|+++...
T Consensus 212 h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~- 287 (435)
T 1p22_A 212 HCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE- 287 (435)
T ss_dssp CCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCC-
T ss_pred CCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCc-
Confidence 999999999963 58999999999999999865421 147889999999999986543
Q ss_pred ccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEE
Q psy9316 155 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTF 232 (264)
Q Consensus 155 ~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~ 232 (264)
....+.+|...|.++.++ +.++++|+.||.|++||+++++.... .+...+.+++| ++++|++|+.|+.|++
T Consensus 288 --~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~v 360 (435)
T 1p22_A 288 --FVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKV 360 (435)
T ss_dssp --EEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEE
T ss_pred --EEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEE
Confidence 233567899999999985 46899999999999999998875322 34556778887 7999999999999999
Q ss_pred EEcccCCCCCC-----CcccCcccceeeeee
Q psy9316 233 IDVVKSLPPRE-----RTLTSRGHLMETRSL 258 (264)
Q Consensus 233 ~d~~~~~~~~~-----~~~~~~~h~~~~~~~ 258 (264)
||++.+..+.. ...++.+|...+.++
T Consensus 361 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 391 (435)
T 1p22_A 361 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 391 (435)
T ss_dssp EEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred EECCCCCCccccccchheeeccCCCCCeEEE
Confidence 99986543221 233456777766654
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.5e-24 Score=178.84 Aligned_cols=214 Identities=20% Similarity=0.240 Sum_probs=168.3
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc-----ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH-----NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
...+.|.+. +.++++.|+.++.|+.. ..+..+.+|...|.++.| ++++|++++.|+.|++|+. + ...
T Consensus 64 ~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~---~--~~~ 135 (313)
T 3odt_A 64 SVCYDSEKE-LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE---G--SLV 135 (313)
T ss_dssp EEEEETTTT-EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET---T--EEE
T ss_pred EEEECCCCC-EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC---C--cEE
Confidence 346677664 56788999999887643 346778899999999999 6889999999999999982 1 233
Q ss_pred EEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-----------------ceEEEeecCCCcEEEEEeccC
Q psy9316 90 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-----------------QIMLASGSFDKSVAIFALDKK 152 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-----------------~~~~~~~~~d~~i~i~~~~~~ 152 (264)
..+..|...+.+++|.|.++.++++++.||.+++||...... ...+++++.|+.|.+|+++..
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTC
T ss_pred EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCch
Confidence 456789999999999986678999999999999999543110 113788999999999998654
Q ss_pred CCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCCCeE
Q psy9316 153 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKEDLV 230 (264)
Q Consensus 153 ~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i 230 (264)
. ....+..|...|.+++|+|++ .+++++.||.|++||+++.+... ..+...+.+++|+|+++ +++++.|+.|
T Consensus 216 ~---~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 216 D---VLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp C---EEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCE
T ss_pred h---hhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcE
Confidence 3 233567899999999999865 47889999999999999987532 23345788999999998 5578899999
Q ss_pred EEEEcccCCCCC
Q psy9316 231 TFIDVVKSLPPR 242 (264)
Q Consensus 231 ~~~d~~~~~~~~ 242 (264)
++||++++....
T Consensus 290 ~iw~~~~~~~~~ 301 (313)
T 3odt_A 290 RIFSQEKSRWAS 301 (313)
T ss_dssp EEEESCGGGCCC
T ss_pred EEEeCCCCceee
Confidence 999998765544
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=1.6e-24 Score=190.71 Aligned_cols=218 Identities=19% Similarity=0.356 Sum_probs=167.0
Q ss_pred ceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEE
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~ 92 (264)
...+.|.+. .++++..|+.+++|+. .+.++.+.+|.+.|.+++| ++++|++|+.||.|++|++..... ....+
T Consensus 139 ~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~ 213 (401)
T 4aez_A 139 SVKWSHDGS-FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH--QIGTL 213 (401)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEE
T ss_pred EEEECCCCC-EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc--eeeEE
Confidence 346777664 5677889999999975 4567788899999999999 568999999999999999874332 23457
Q ss_pred ecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc--------------------eEEEeec--CCCcEEEEEec
Q psy9316 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ--------------------IMLASGS--FDKSVAIFALD 150 (264)
Q Consensus 93 ~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~--------------------~~~~~~~--~d~~i~i~~~~ 150 (264)
.+|...|.+++|+| ++.++++++.||.|++||+++++.. .++++++ .|+.|.+|+++
T Consensus 214 ~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 214 QGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred cCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 78999999999999 4578999999999999999875321 2456654 89999999987
Q ss_pred cCCCccceEEEeccccceeeEEEcCCCCCEEEE--EeCCCcEEEEeCCCCccee----EeecCceEEEEEcCCCCEEEEe
Q psy9316 151 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST--ASGDKTVRIWDARTQKSQI----IATKGENINITWAPNGNTIAVG 224 (264)
Q Consensus 151 ~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s--~~~dg~i~iwD~~t~~~~~----~~~~~~~~~v~~sp~g~~la~g 224 (264)
..... .. ..+...|.+++|+|++ ..+++ |+.||.|++||+.+..... ..+...+.+++|+|+|++|+++
T Consensus 293 ~~~~~---~~-~~~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 367 (401)
T 4aez_A 293 TGARV---NT-VDAGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA 367 (401)
T ss_dssp TCCEE---EE-EECSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE
T ss_pred CCCEE---EE-EeCCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 54322 12 2466789999999865 56666 4489999999999865322 2345578899999999999999
Q ss_pred eCCCeEEEEEcccCCCCCC
Q psy9316 225 NKEDLVTFIDVVKSLPPRE 243 (264)
Q Consensus 225 s~d~~i~~~d~~~~~~~~~ 243 (264)
+.|+.|++||+.++....+
T Consensus 368 ~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 368 ASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp CTTSEEEEEECCC------
T ss_pred eCCCcEEEEECCCCccccc
Confidence 9999999999987655443
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=5.7e-24 Score=185.47 Aligned_cols=223 Identities=17% Similarity=0.270 Sum_probs=166.6
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc--ccccc-------------ccCCCCEEEEEECC-CCCeEEEEECCCcEEE
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN--DIKEY-------------QAHGSKVHSVAWSC-DGRRLASGSFDKSVAI 77 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~-------------~~h~~~V~~l~~s~-~g~~l~s~s~dg~i~v 77 (264)
....+.|..+.++++++.|+.+++|+... ....+ .+|.+.|.+++|+| ++++|++++.|+.|++
T Consensus 47 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 126 (408)
T 4a11_B 47 NTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKV 126 (408)
T ss_dssp EEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEE
T ss_pred EEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEE
Confidence 34477773445677899999999997643 22232 25999999999999 7889999999999999
Q ss_pred EEeccCCCCcccEEEecccccEEeEEEecCCC--CeEEEEeCCCcEEEEECCCCCcc--------------------eEE
Q psy9316 78 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQKSQ--------------------IML 135 (264)
Q Consensus 78 ~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~--~~l~s~s~dg~i~vwd~~~~~~~--------------------~~~ 135 (264)
|++.... ....+ .+...+.++.|.+.+. .++++++.||.|++||+++++.. .++
T Consensus 127 wd~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 127 WDTNTLQ---TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp EETTTTE---EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred eeCCCCc---cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEE
Confidence 9986422 11223 3677899999988643 48999999999999999865421 157
Q ss_pred EeecCCCcEEEEEeccCCCccc-------------eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNK-------------EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI 202 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~-------------~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~ 202 (264)
++++.|+.|.+|+++....... ......|...|.+++|+|+ +.+|++++.||.|++||+++.+...
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD-GLHLLTVGTDNRMRLWNSSNGENTL 281 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCBCC
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC-CCEEEEecCCCeEEEEECCCCccce
Confidence 8899999999999865431110 0112468889999999985 5788999999999999998754210
Q ss_pred -------------------------------------------------EeecCceEEEEEcCCCCEEEEeeCCCeEEEE
Q psy9316 203 -------------------------------------------------IATKGENINITWAPNGNTIAVGNKEDLVTFI 233 (264)
Q Consensus 203 -------------------------------------------------~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~ 233 (264)
..+...+.+++|+|++++|++|+.|+.|++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 361 (408)
T 4a11_B 282 VNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAW 361 (408)
T ss_dssp CCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 1133467889999999999999999999999
Q ss_pred EcccCCCC
Q psy9316 234 DVVKSLPP 241 (264)
Q Consensus 234 d~~~~~~~ 241 (264)
|+......
T Consensus 362 ~~~~~~~~ 369 (408)
T 4a11_B 362 VPSLYEPV 369 (408)
T ss_dssp EECC----
T ss_pred eCCCCCcc
Confidence 99875544
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=7.1e-24 Score=187.72 Aligned_cols=228 Identities=18% Similarity=0.355 Sum_probs=172.8
Q ss_pred eEeecCCCC--CceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEe
Q psy9316 5 VIQFHTPKS--PEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80 (264)
Q Consensus 5 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~ 80 (264)
.++++++.. .-..+.|.+. ++++++.|+.+++|+. .+.++.+.+|...+.++.++ +..|++|+.|+.+++|+.
T Consensus 140 ~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDV 216 (420)
T ss_dssp EEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEET
T ss_pred EEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeee
Confidence 345555443 3347777775 5678999999999975 46678899999999998875 789999999999999997
Q ss_pred ccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc------------------------eEE-
Q psy9316 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ------------------------IML- 135 (264)
Q Consensus 81 ~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~------------------------~~~- 135 (264)
.... .....+.+|...+..+.|.|.+ .++++++.|+.+++||..+++.. ..+
T Consensus 217 ~~~~--~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 217 RVAE--HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp TSSS--CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred cccc--eeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 6432 2334578999999999999855 78999999999999998764311 122
Q ss_pred -EeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE-EeCCCcEEEEeCCCCccee--EeecCceEE
Q psy9316 136 -ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST-ASGDKTVRIWDARTQKSQI--IATKGENIN 211 (264)
Q Consensus 136 -~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s-~~~dg~i~iwD~~t~~~~~--~~~~~~~~~ 211 (264)
+.|+.|+.|++|++...... ..+ .+...+..+.|+|.+..++++ |+.||.|+|||+.+.+... ..+.+.+.+
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~~---~~~-~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~ 369 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGACL---SAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 369 (420)
T ss_dssp EEECTTTCEEEEEETTTTEEE---EEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEeecCCCEEEEEeCCccccc---eee-ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 34678999999998653221 122 344578889999876555443 3379999999999987532 345678999
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 212 v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
++|+|+|++|++|+.|++|++||+.+..+.+
T Consensus 370 l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 370 LTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 9999999999999999999999998755443
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=2.2e-24 Score=191.04 Aligned_cols=217 Identities=11% Similarity=0.253 Sum_probs=162.6
Q ss_pred EeecCCCeeEEEeecCceEEeccccc-------------cccccccCC------------CCEEEEEECCCC--CeEEEE
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHN-------------DIKEYQAHG------------SKVHSVAWSCDG--RRLASG 69 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~-------------~~~~~~~h~------------~~V~~l~~s~~g--~~l~s~ 69 (264)
.+.|.+. ++++++.|+.+++|+... ....+.+|. +.|.+++|+|++ .+|+++
T Consensus 35 ~~s~~g~-~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 35 EFNHSGE-LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EECSSSS-EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EECCCCC-EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 5666664 567889999999997542 356788998 889999999998 799999
Q ss_pred ECCCcEEEEEeccCCCC------------------------------------cccEE-EecccccEEeEEEecCCCCeE
Q psy9316 70 SFDKSVAIFALDKKGDL------------------------------------NKEVV-YRGHTGSVDQLCWHATNPDLL 112 (264)
Q Consensus 70 s~dg~i~v~~~~~~~~~------------------------------------~~~~~-~~~h~~~v~~i~~~~~~~~~l 112 (264)
+.|+.|++|++...... ..... ..+|...|.+++|+|+ +.++
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l 192 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD-YETY 192 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT-SSEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC-CCEE
Confidence 99999999998642110 00001 3579999999999995 4688
Q ss_pred EEEeCCCcEEEEECCCCC---------------------------cc-eEEEeecCCCcEEEEEeccCCCcc-ceEEEec
Q psy9316 113 STASGDKTVRIWDARTQK---------------------------SQ-IMLASGSFDKSVAIFALDKKGDLN-KEVVYRG 163 (264)
Q Consensus 113 ~s~s~dg~i~vwd~~~~~---------------------------~~-~~~~~~~~d~~i~i~~~~~~~~~~-~~~~~~~ 163 (264)
++| .|+.|++||+++.. .. ..+++++.|+.|.+|+++...... ....+..
T Consensus 193 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 271 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEE 271 (447)
T ss_dssp EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECC
T ss_pred EEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEecc
Confidence 887 79999999998211 01 368899999999999987654311 1245566
Q ss_pred ccc------------ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCC-Ccce--eEeecCc---------------eEEEE
Q psy9316 164 HTG------------SVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQ--IIATKGE---------------NINIT 213 (264)
Q Consensus 164 h~~------------~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t-~~~~--~~~~~~~---------------~~~v~ 213 (264)
|.. .|.+++|+|+ +.+|++++. |.|++||+++ ++.. ...+... +..++
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 272 PEDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECC 349 (447)
T ss_dssp C-----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred CCCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEE
Confidence 665 8999999984 578888888 9999999987 4432 1222110 22489
Q ss_pred EcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 214 WAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 214 ~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
|+|+|++|++|+.|+.|++||+..+
T Consensus 350 ~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ECCCCCEEEEeccCCEEEEEEcCCC
Confidence 9999999999999999999998764
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=1.1e-23 Score=188.15 Aligned_cols=227 Identities=20% Similarity=0.286 Sum_probs=174.3
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEEC--CCCCeEEEEECCCcEEEEEeccCCCCcc----
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWS--CDGRRLASGSFDKSVAIFALDKKGDLNK---- 88 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s--~~g~~l~s~s~dg~i~v~~~~~~~~~~~---- 88 (264)
.+.|.+ ..++++.|+.+++|+. .+.+..+.+|.+.|.+++|+ +++++|++|+.|+.|++|++........
T Consensus 169 ~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 169 KYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EECSTT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEcCCC--EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 444444 6678999999999975 45677888999999999998 5789999999999999999875432210
Q ss_pred ----------------cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------------ce
Q psy9316 89 ----------------EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------------QI 133 (264)
Q Consensus 89 ----------------~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------------~~ 133 (264)
...+.+|...|.++.. ++.++++++.||.|++||+++.+. ..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK 323 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT
T ss_pred CCcceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC
Confidence 2346678888888754 347899999999999999987542 12
Q ss_pred EEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee-cCceEEE
Q psy9316 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-KGENINI 212 (264)
Q Consensus 134 ~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~-~~~~~~v 212 (264)
.+++|+.|+.|++|+++... ....+.+|...|.++.|++ .++++++.||.|++||+++........ ...+..+
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 397 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 397 (464)
T ss_dssp EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEE
T ss_pred EEEEEeCCCcEEEEECCCCc---EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEE
Confidence 57899999999999986532 2345678999999999973 689999999999999999877544443 3445678
Q ss_pred EEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 213 TWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 213 ~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+|+|+++++++|+ |+.|++||+..+...++ ...+|...+.+|
T Consensus 398 ~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~---~~~~~~~~v~~v 439 (464)
T 3v7d_B 398 TFYVSDNILVSGS-ENQFNIYNLRSGKLVHA---NILKDADQIWSV 439 (464)
T ss_dssp EEEECSSEEEEEE-TTEEEEEETTTCCEEES---CTTTTCSEEEEE
T ss_pred EEEeCCCEEEEec-CCeEEEEECCCCcEEeh---hhccCCCcEEEE
Confidence 9999999999999 99999999987554332 134555555544
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=3.9e-24 Score=203.22 Aligned_cols=217 Identities=18% Similarity=0.304 Sum_probs=174.9
Q ss_pred CceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
....+.|.+. ..+++..|+.+++|+. ...+..+.+|.+.|.+++|+|++++|++|+.||.|++|++.... ....
T Consensus 17 ~~i~~sp~~~-~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---~~~~ 92 (814)
T 3mkq_A 17 KGIDFHPTEP-WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE---KVVD 92 (814)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC---EEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEE
Confidence 4447778775 4567888999999874 45678888999999999999999999999999999999986432 2345
Q ss_pred EecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEEEeecCCCcEEEEEec
Q psy9316 92 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIMLASGSFDKSVAIFALD 150 (264)
Q Consensus 92 ~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~~~~~~d~~i~i~~~~ 150 (264)
+.+|...|.+++|+|++ .++++++.||.|++||++++.. ...+++++.|+.|.+|+++
T Consensus 93 ~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp EECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred EecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 67899999999999965 6788999999999999876421 2257888999999999986
Q ss_pred cCCCccceEEEe-ccccceeeEEEcCC-CCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeC
Q psy9316 151 KKGDLNKEVVYR-GHTGSVDQLCWHAT-NPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNK 226 (264)
Q Consensus 151 ~~~~~~~~~~~~-~h~~~i~~i~~~~~-~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~ 226 (264)
..... ..+. .+...+..++|+|. ++.++++++.||.|++||+++++.... .+...+.+++|+|+|+++++|+.
T Consensus 172 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 172 QSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp CSSCS---EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred CCcce---eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 54322 2233 34478999999983 456899999999999999998775322 34556889999999999999999
Q ss_pred CCeEEEEEcccC
Q psy9316 227 EDLVTFIDVVKS 238 (264)
Q Consensus 227 d~~i~~~d~~~~ 238 (264)
|+.|++||+..+
T Consensus 249 dg~v~vwd~~~~ 260 (814)
T 3mkq_A 249 DGTLKIWNSSTY 260 (814)
T ss_dssp TSCEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 999999998763
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.8e-25 Score=188.78 Aligned_cols=227 Identities=9% Similarity=0.052 Sum_probs=160.0
Q ss_pred CeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCC------CCcccEEE-e
Q psy9316 23 SQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG------DLNKEVVY-R 93 (264)
Q Consensus 23 ~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~------~~~~~~~~-~ 93 (264)
+...++++.|+.+++|+.. +.+..+. ...|.++.|+|+ +++++.|++|++|+..... .......+ .
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 3456778999999999764 3344443 467788888888 9999999999999765210 11101112 2
Q ss_pred cccccEEeEEEec--CCCCeEEEEeCCCcEEEEECCCCCc--------------------ceEEEeecCCCcEEEEEecc
Q psy9316 94 GHTGSVDQLCWHA--TNPDLLSTASGDKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDK 151 (264)
Q Consensus 94 ~h~~~v~~i~~~~--~~~~~l~s~s~dg~i~vwd~~~~~~--------------------~~~~~~~~~d~~i~i~~~~~ 151 (264)
.|...|.+++|+| .+ .++++++.||.|++||+++++. ..++++|+.|+.|++||++.
T Consensus 123 ~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 5668899999998 54 7899999999999999987542 12578899999999999976
Q ss_pred CCCccceEEEec-cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee--Ee---ecCce--EEEEEcCCCCEEEE
Q psy9316 152 KGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--IA---TKGEN--INITWAPNGNTIAV 223 (264)
Q Consensus 152 ~~~~~~~~~~~~-h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~--~~---~~~~~--~~v~~sp~g~~la~ 223 (264)
..... ..+.. |..+|.+++|+|+ +.+|++++ |+.|++||+++.+... .. +...+ .+++|+|+|++|++
T Consensus 202 ~~~~~--~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 202 PDQAS--SRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp TTSCC--EECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred CCCCc--cEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 54321 24555 9999999999985 57888888 5599999999876421 11 11122 35999999999999
Q ss_pred eeC-CCeEEEEEcccCCCCCCC----cccCcccceeeeeec
Q psy9316 224 GNK-EDLVTFIDVVKSLPPRER----TLTSRGHLMETRSLW 259 (264)
Q Consensus 224 gs~-d~~i~~~d~~~~~~~~~~----~~~~~~h~~~~~~~~ 259 (264)
++. |+.+++|++.+.....+. ...+.+|..+++.+.
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMD 318 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEE
T ss_pred ecCCCCcEEEEEEcccccceEecCceeEecCccccccceeE
Confidence 998 999999998765443333 345556666665543
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-24 Score=192.04 Aligned_cols=220 Identities=12% Similarity=0.130 Sum_probs=160.8
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc---c--c-cccc-cCCCCEEEEEECCCCCeEEEEECCCcEEEEEecc--CC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN---D--I-KEYQ-AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDK--KG 84 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~-~~~~-~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~--~~ 84 (264)
....+.|..+.++++++.|+.+++|+... . . ..+. .|.+.|.+++|+|++++|++|+.||.|++|++.. .+
T Consensus 67 ~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 67 TSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEET
T ss_pred EEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCC
Confidence 33467773445678899999999997644 1 1 1222 6999999999999999999999999999999852 12
Q ss_pred CCcccEEEec------------ccccEEeEEE--ecCCCCeEEEEeCCCcEEEEECCCCCc-------------------
Q psy9316 85 DLNKEVVYRG------------HTGSVDQLCW--HATNPDLLSTASGDKTVRIWDARTQKS------------------- 131 (264)
Q Consensus 85 ~~~~~~~~~~------------h~~~v~~i~~--~~~~~~~l~s~s~dg~i~vwd~~~~~~------------------- 131 (264)
... ..... +...+.++.+ ++ ++.++++++.||.|++||+++++.
T Consensus 147 ~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s 223 (437)
T 3gre_A 147 SEV--KFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICID 223 (437)
T ss_dssp TEE--EEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEEC
T ss_pred cee--eccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEEC
Confidence 211 11111 3445666653 34 457899999999999999987542
Q ss_pred --ceEEEeecCCCcEEEEEeccCCCccceEEEe-ccccceeeEEEcCC---CCCEEEEEeCCCcEEEEeCCCCcceeEe-
Q psy9316 132 --QIMLASGSFDKSVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHAT---NPDLLSTASGDKTVRIWDARTQKSQIIA- 204 (264)
Q Consensus 132 --~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~-~h~~~i~~i~~~~~---~~~~i~s~~~dg~i~iwD~~t~~~~~~~- 204 (264)
...+++|+.|+.|.+|+++... ....+. .|..+|.+++|+|. ++.+|++++.||.|++||+++++.....
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNV---LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTE---EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCcc---EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 1257889999999999987532 122333 67789999988874 4558999999999999999987642211
Q ss_pred ---------------------------ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 205 ---------------------------TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 205 ---------------------------~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
+...+.+++|+ ++++|++|+.|+.|++||+.++..
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 22236778999 789999999999999999886543
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.1e-24 Score=187.90 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=169.1
Q ss_pred eEeecCCCeeEEEeecCceEEeccc-cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNT-HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
..+.|.+. +++++..|+.+++|+. ...+..+..|.+.|.+++|+|++++|++++.|+.|++|++.... ....+..
T Consensus 114 ~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~ 189 (425)
T 1r5m_A 114 LAWSHDGN-SIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT---VMQHFEL 189 (425)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE---EEEEECC
T ss_pred EEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc---EEEEeec
Confidence 35666554 5678899999999974 35567788999999999999999999999999999999986422 2233445
Q ss_pred cccc---------------EEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecC
Q psy9316 95 HTGS---------------VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSF 140 (264)
Q Consensus 95 h~~~---------------v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~ 140 (264)
+... +.+++|++. ..+++++.||.|++||+++++.. ..+++++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 267 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD 267 (425)
T ss_dssp C---------------CCCBSCCEEEET--TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred cccCccceeeccccCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC
Confidence 5554 889999874 46888999999999999875321 25788899
Q ss_pred CCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCC
Q psy9316 141 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNG 218 (264)
Q Consensus 141 d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g 218 (264)
|+.|.+|+++.... ...+..|...|.+++|+|++ ++++++.||.|++||+++.+.... .+...+.+++|+|++
T Consensus 268 d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 268 DGTLRIWHGGNGNS---QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp TSCEEEECSSSBSC---SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTS
T ss_pred CCEEEEEECCCCcc---ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCC
Confidence 99999999865332 23456788999999999865 889999999999999998875332 234578899999999
Q ss_pred CEEEEeeCCCeEEEEEcccCC
Q psy9316 219 NTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 219 ~~la~gs~d~~i~~~d~~~~~ 239 (264)
++|++++.|+.|++||++.+.
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHH
T ss_pred CEEEEEECCCeEEEEECCCCc
Confidence 999999999999999998654
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.4e-24 Score=181.47 Aligned_cols=191 Identities=14% Similarity=0.204 Sum_probs=152.5
Q ss_pred ccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEE
Q psy9316 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123 (264)
Q Consensus 44 ~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~v 123 (264)
...+.+|.+.|.+++|+|++++|++++.||.|++|++... .....+.+|...|.+++|+|+ +.++++++.||.|++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG---ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC---CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc---hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeEEE
Confidence 3457899999999999999999999999999999998642 233457789999999999985 478999999999999
Q ss_pred EECCCCCcc------------------eEEEeecCC-----CcEEEEEeccCCCcc--------ceEEEecccc--ceee
Q psy9316 124 WDARTQKSQ------------------IMLASGSFD-----KSVAIFALDKKGDLN--------KEVVYRGHTG--SVDQ 170 (264)
Q Consensus 124 wd~~~~~~~------------------~~~~~~~~d-----~~i~i~~~~~~~~~~--------~~~~~~~h~~--~i~~ 170 (264)
||+++++.. ..+++++.+ +.+.+|+++...... ....+..|.. .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999876432 245666667 999999987654321 1123345555 8999
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCC-Cccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 171 LCWHATNPDLLSTASGDKTVRIWDART-QKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg~i~iwD~~t-~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
++|+|+ +.++++++.||.|++||+++ ..... ..+...+.+++|+|++++|++++.|+.|++||++.+.
T Consensus 181 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 181 AGWSTK-GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEECGG-GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEcCC-CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 999985 56888999999999999998 34322 2345678899999999999999999999999987643
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=1.2e-23 Score=183.58 Aligned_cols=228 Identities=12% Similarity=0.173 Sum_probs=171.3
Q ss_pred eEeecCCCCC--ceEeecC---CC---eeEEEeecCceEEecccc--cc-----ccccccC-----CCCEEEEEEC----
Q psy9316 5 VIQFHTPKSP--EYKLLPS---GS---QFHLVCKIDDYVKHFNTH--ND-----IKEYQAH-----GSKVHSVAWS---- 60 (264)
Q Consensus 5 ~~~~~~~~~~--~~~~~~~---~~---~~~~~~~~d~~~~~~~~~--~~-----~~~~~~h-----~~~V~~l~~s---- 60 (264)
...+..+..+ ...+.|. .+ .++++++.|+.+++|+.. .. +..+..| .+.|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 3444444443 3355665 13 566788999999999753 33 6677888 5899999999
Q ss_pred CCCCe-EEEEECCCcEEEEEecc------CCCCc--ccEEE-------ecccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 61 CDGRR-LASGSFDKSVAIFALDK------KGDLN--KEVVY-------RGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 61 ~~g~~-l~s~s~dg~i~v~~~~~------~~~~~--~~~~~-------~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
|++++ |++++.||.|++|++.. ..... ....+ ..|...|.+++|+|++ ++++++.||.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 99999 99999999999999976 32221 11134 3488899999999965 88999999999999
Q ss_pred ECCCCCc-------------------------ceEEEeecCC---CcEEEEEeccCCCccceEEEec-------------
Q psy9316 125 DARTQKS-------------------------QIMLASGSFD---KSVAIFALDKKGDLNKEVVYRG------------- 163 (264)
Q Consensus 125 d~~~~~~-------------------------~~~~~~~~~d---~~i~i~~~~~~~~~~~~~~~~~------------- 163 (264)
|+++.+. ...+++++.| +.|.+|+++... ....+..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc---ccceeccCcccccccccccc
Confidence 9875321 1146778888 999999986542 2234556
Q ss_pred cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee-----------------------cCceEEEEEcCCC--
Q psy9316 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-----------------------KGENINITWAPNG-- 218 (264)
Q Consensus 164 h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~-----------------------~~~~~~v~~sp~g-- 218 (264)
|...|.+++|+|+ +.+|++++.||.|++||+++.+...... ...+.+++|+|+|
T Consensus 290 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 290 HSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp BSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred cCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 8899999999985 5689999999999999999887533322 5568899999999
Q ss_pred --------CEEEEeeCCCeEEEEEcccC
Q psy9316 219 --------NTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 219 --------~~la~gs~d~~i~~~d~~~~ 238 (264)
++|++|+.|+.|++||+.++
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999998753
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-24 Score=206.29 Aligned_cols=193 Identities=20% Similarity=0.359 Sum_probs=154.9
Q ss_pred cccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCC-CCeEEEEeCCCcEEE
Q psy9316 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 123 (264)
Q Consensus 45 ~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~v 123 (264)
..+.+|.+.|.+++|+|++++|++|+.||.|++|++.. +.......+.+|.+.|.+++|++.. ++++++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~-~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET-TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC-CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 45789999999999999999999999999999999863 2223334577899999999998752 579999999999999
Q ss_pred EECCCCC---------------------c--ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC----
Q psy9316 124 WDARTQK---------------------S--QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT---- 176 (264)
Q Consensus 124 wd~~~~~---------------------~--~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~---- 176 (264)
||+++++ . ...+++|+.|+.|.+|+++...... ...+.+|...|.++.|+|.
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC---
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCccccc
Confidence 9987753 1 2367889999999999987653322 3356789999999999995
Q ss_pred --------CCCEEEEEeCCCcEEEEeCCCCcce------eEeecCceEEEEEcCC---CCEEEEeeCCCeEEEEEcccCC
Q psy9316 177 --------NPDLLSTASGDKTVRIWDARTQKSQ------IIATKGENINITWAPN---GNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 177 --------~~~~i~s~~~dg~i~iwD~~t~~~~------~~~~~~~~~~v~~sp~---g~~la~gs~d~~i~~~d~~~~~ 239 (264)
++.++++++.||.|++||+++.... ...+...+.+++|+|+ ++++++|+.|+.|++||++.+.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 4678899999999999999877421 1123566899999999 9999999999999999998754
No 96
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=4.6e-24 Score=189.68 Aligned_cols=222 Identities=16% Similarity=0.320 Sum_probs=167.5
Q ss_pred eecCCCCCceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCC
Q psy9316 7 QFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~ 84 (264)
.+.++..+-..+-. .+...++++.|+.+++|+. .+.+..+.+|.+.|.+++|+ ++.|++|+.||.|++||+....
T Consensus 168 ~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 168 ILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp EECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSS
T ss_pred EEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCC
Confidence 34444444444444 4456778999999999975 45677888999999999997 5699999999999999987644
Q ss_pred CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-----------------eEEEeecCCCcEEEE
Q psy9316 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-----------------IMLASGSFDKSVAIF 147 (264)
Q Consensus 85 ~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-----------------~~~~~~~~d~~i~i~ 147 (264)
.......+.+|...|.+++| ++.++++++.||.|++||+++++.. ..+++|+.|+.|.+|
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iw 321 (435)
T 1p22_A 245 DITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 321 (435)
T ss_dssp CCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred CceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEE
Confidence 33322456789999999999 3478999999999999999876421 257889999999999
Q ss_pred EeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc---------c--eeEeecCceEEEEEcC
Q psy9316 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK---------S--QIIATKGENINITWAP 216 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~---------~--~~~~~~~~~~~v~~sp 216 (264)
+++... ....+.+|...|.++.| ++.++++|+.||.|++||+++.. . ....+.+.+.+++|
T Consensus 322 d~~~~~---~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-- 393 (435)
T 1p22_A 322 DIECGA---CLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-- 393 (435)
T ss_dssp ETTTCC---EEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--
T ss_pred ECCCCC---EEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--
Confidence 987543 23456789999999998 35789999999999999997543 2 11234456788888
Q ss_pred CCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 217 NGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 217 ~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
++++|++|+.|+.|++||+.+.....
T Consensus 394 ~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 394 DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp CSSCEEECCSSSEEEEEC--------
T ss_pred CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 78999999999999999998755443
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3e-24 Score=188.71 Aligned_cols=217 Identities=15% Similarity=0.237 Sum_probs=167.2
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc---------cccccccCCCCEEEEEECCCC-CeEEEEECCCcEEEEEeccC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN---------DIKEYQAHGSKVHSVAWSCDG-RRLASGSFDKSVAIFALDKK 83 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~h~~~V~~l~~s~~g-~~l~s~s~dg~i~v~~~~~~ 83 (264)
....+.|.++.++++++.|+.+++|+... .+..+.+|.+.|.+++|+|++ ++|++++.|+.|++||+...
T Consensus 85 ~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 164 (402)
T 2aq5_A 85 LDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG 164 (402)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC
Confidence 44577774455778899999999997643 466788999999999999998 69999999999999998642
Q ss_pred CCCcccEEE--ecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEEEee--
Q psy9316 84 GDLNKEVVY--RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIMLASG-- 138 (264)
Q Consensus 84 ~~~~~~~~~--~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~~~~-- 138 (264)
.....+ ..|...|.+++|+|++ .++++++.||.|++||+++++. ...+++|
T Consensus 165 ---~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 165 ---AAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp ---EEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred ---CccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 222345 6799999999999954 7888999999999999986431 1245666
Q ss_pred -cCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc---eeEee--cCceEEE
Q psy9316 139 -SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---QIIAT--KGENINI 212 (264)
Q Consensus 139 -~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~---~~~~~--~~~~~~v 212 (264)
+.|+.|.+|+++....... .....|...+..++|+|++..++++++.||.|++||+.+++. .+..+ ...+.++
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~ 319 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLS-LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGM 319 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSE-EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEE
T ss_pred CCCCceEEEEcCccccCCce-EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccce
Confidence 6899999999876443221 122356778999999997655556677899999999998773 22222 3568899
Q ss_pred EEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 213 TWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 213 ~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+|+|++.++++ .++.+++|++..
T Consensus 320 ~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 320 GYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp EECCGGGSCGG--GTEEEEEEEEET
T ss_pred EEeccccccee--cceeEEEEEcCC
Confidence 99999998864 567999999875
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=8.7e-24 Score=183.50 Aligned_cols=193 Identities=15% Similarity=0.236 Sum_probs=132.3
Q ss_pred ccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC
Q psy9316 40 THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119 (264)
Q Consensus 40 ~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg 119 (264)
+...+..+..|.+.|.+++|+|||++|++|+.|+ +++|+++.. .. ....+...+..+++.+....++++++.|+
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV---AH--IMSQEMRHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE---EE--EEEEECSCCCEEEECTTSSEEEEECSSTT
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc---ce--eeeeecCCeEEEEEcCCCCEEEEEECCcc
Confidence 3445556788999999999999999999988765 789997631 11 11122223555666665544445677777
Q ss_pred cEEEEECCCCCcce-----------------------------------------------------EEEe--ecCCCcE
Q psy9316 120 TVRIWDARTQKSQI-----------------------------------------------------MLAS--GSFDKSV 144 (264)
Q Consensus 120 ~i~vwd~~~~~~~~-----------------------------------------------------~~~~--~~~d~~i 144 (264)
+|++||+++++... .++. |+.||.|
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v 161 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQI 161 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCE
T ss_pred EEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEE
Confidence 88888876543110 1122 6778888
Q ss_pred EEEEeccCCCc------------cc-eEEEeccccceeeEEEcCCCCCEEEEEeCCCc-EEEEeCCCCcceeEe----ec
Q psy9316 145 AIFALDKKGDL------------NK-EVVYRGHTGSVDQLCWHATNPDLLSTASGDKT-VRIWDARTQKSQIIA----TK 206 (264)
Q Consensus 145 ~i~~~~~~~~~------------~~-~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~-i~iwD~~t~~~~~~~----~~ 206 (264)
.+|+++..... .+ ...+.+|...|.+++|+|+ +.+|++++.||+ |++||+++++..... +.
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 88887643210 01 3467899999999999994 579999999998 999999998753322 45
Q ss_pred CceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 207 GENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 207 ~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
..+.+++|+|+|++|++|+.|+.|++||++...
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 678999999999999999999999999997643
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3.7e-24 Score=189.59 Aligned_cols=187 Identities=16% Similarity=0.284 Sum_probs=144.9
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC--------CcccEEEeccc------------ccEEeEEEecCC
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD--------LNKEVVYRGHT------------GSVDQLCWHATN 108 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~--------~~~~~~~~~h~------------~~v~~i~~~~~~ 108 (264)
.|.+.|.+++|+|+|++|++|+.||.|++|++..... ......+.+|. ..|.+++|+|.+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 5678999999999999999999999999999875331 11234567898 889999999965
Q ss_pred C-CeEEEEeCCCcEEEEECCCCC---------------------------------------------------------
Q psy9316 109 P-DLLSTASGDKTVRIWDARTQK--------------------------------------------------------- 130 (264)
Q Consensus 109 ~-~~l~s~s~dg~i~vwd~~~~~--------------------------------------------------------- 130 (264)
. .++++++.||.|++||+....
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3 588899999999999975411
Q ss_pred --cceEEEeecCCCcEEEEEeccCCCccceE-----EEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc---
Q psy9316 131 --SQIMLASGSFDKSVAIFALDKKGDLNKEV-----VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--- 200 (264)
Q Consensus 131 --~~~~~~~~~~d~~i~i~~~~~~~~~~~~~-----~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~--- 200 (264)
....++++ .|+.|.+|+++..+...... .+.+|...|.+++|+|++..+|++++.||.|++||+++.+.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 01246777 79999999986322111110 24578899999999997668999999999999999998764
Q ss_pred --eeE-eecC------------ceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 201 --QII-ATKG------------ENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 201 --~~~-~~~~------------~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
... .+.. .+.+++|+|+|++|++++. +.|++||++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 222 1222 6889999999999999998 9999999975
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=2.7e-23 Score=190.79 Aligned_cols=234 Identities=16% Similarity=0.223 Sum_probs=175.8
Q ss_pred eEeecCCCeeEEEeecCceEEeccc--cccccccccCCC---CEEEEEECCC-CCeEEEEECCCcEEEEEeccCCCCccc
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGS---KVHSVAWSCD-GRRLASGSFDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~---~V~~l~~s~~-g~~l~s~s~dg~i~v~~~~~~~~~~~~ 89 (264)
..+.|.+....++++.|+.+++|+. .+.+..+.+|.+ .|.+++|+|+ +++|++++.|+.|++|++.... ..
T Consensus 166 ~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---~~ 242 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE---FL 242 (615)
T ss_dssp EEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC---EE
T ss_pred EEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC---Ee
Confidence 3566666556778999999999975 356677889999 9999999999 9999999999999999986422 22
Q ss_pred EEE-e---cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc----------------------eEEEeecCCCc
Q psy9316 90 VVY-R---GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ----------------------IMLASGSFDKS 143 (264)
Q Consensus 90 ~~~-~---~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~----------------------~~~~~~~~d~~ 143 (264)
..+ . .|...|.+++|+ ++.++++++.||.|++||+++++.. ..+++++.|+.
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 320 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred EEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCC
Confidence 334 4 799999999998 5578999999999999999864311 12444455555
Q ss_pred EEEEEecc------------------------------------------------------------------------
Q psy9316 144 VAIFALDK------------------------------------------------------------------------ 151 (264)
Q Consensus 144 i~i~~~~~------------------------------------------------------------------------ 151 (264)
|.+|+++.
T Consensus 321 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~ 400 (615)
T 1pgu_A 321 LNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGI 400 (615)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTE
T ss_pred EEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEc
Confidence 55554321
Q ss_pred -----------------------------------------------------------------CCCcc-------ce-
Q psy9316 152 -----------------------------------------------------------------KGDLN-------KE- 158 (264)
Q Consensus 152 -----------------------------------------------------------------~~~~~-------~~- 158 (264)
++.+. ..
T Consensus 401 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~ 480 (615)
T 1pgu_A 401 TKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVS 480 (615)
T ss_dssp EEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEE
T ss_pred ccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCcccc
Confidence 00000 00
Q ss_pred -EEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--e-ecCceEEEEEcC----------CCCEEEEe
Q psy9316 159 -VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--A-TKGENINITWAP----------NGNTIAVG 224 (264)
Q Consensus 159 -~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~-~~~~~~~v~~sp----------~g~~la~g 224 (264)
..+..|...|.+++|+|+ +.+|++++.||.|++||+.+.+.... . +...+.+++|+| ++++|++|
T Consensus 481 ~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~ 559 (615)
T 1pgu_A 481 FDLKTPLRAKPSYISISPS-ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 559 (615)
T ss_dssp EECSSCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEE
T ss_pred ccccCCccCceEEEEECCC-CCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEE
Confidence 123457788999999985 57899999999999999998875332 2 556789999999 99999999
Q ss_pred eCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 225 NKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 225 s~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+.|+.|++||+..+. +...++++|...+.+|
T Consensus 560 ~~dg~i~iw~~~~~~---~~~~~~~~h~~~v~~l 590 (615)
T 1pgu_A 560 SLDTNIFIYSVKRPM---KIIKALNAHKDGVNNL 590 (615)
T ss_dssp ETTSCEEEEESSCTT---CCEEETTSSTTCEEEE
T ss_pred cCCCcEEEEECCCCc---eechhhhcCccceEEE
Confidence 999999999987643 3345678888877765
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=1.1e-23 Score=180.97 Aligned_cols=212 Identities=18% Similarity=0.241 Sum_probs=153.5
Q ss_pred cccccccccCCCCEEEEEECCC---CCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeC
Q psy9316 41 HNDIKEYQAHGSKVHSVAWSCD---GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 117 (264)
Q Consensus 41 ~~~~~~~~~h~~~V~~l~~s~~---g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~ 117 (264)
.+.++.+.+|.+.|.+++|+|+ |++|++|+.||.|++|++...+. .....+.+|...|.+++|+|+ +.+|++++.
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~ 106 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-TIPKAQQMHTGPVLDVCWSDD-GSKVFTASC 106 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-EEEEEEEECSSCEEEEEECTT-SSEEEEEET
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-eeEEEeccccCCEEEEEECcC-CCEEEEEcC
Confidence 4566778999999999999998 69999999999999999975332 222457789999999999994 478999999
Q ss_pred CCcEEEEECCCCCc--------------------ceEEEeecCCCcEEEEEeccCCCccceE------------------
Q psy9316 118 DKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDKKGDLNKEV------------------ 159 (264)
Q Consensus 118 dg~i~vwd~~~~~~--------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~------------------ 159 (264)
||.|++||+++++. ...+++++.|+.|.+|+++.........
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVA 186 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEE
Confidence 99999999987542 1247888999999999987543221100
Q ss_pred -------------------EE-eccccceeeEEEcCC---CCCEEEEEeCCCcEEEEeCCCCcc-----eeEeecC----
Q psy9316 160 -------------------VY-RGHTGSVDQLCWHAT---NPDLLSTASGDKTVRIWDARTQKS-----QIIATKG---- 207 (264)
Q Consensus 160 -------------------~~-~~h~~~i~~i~~~~~---~~~~i~s~~~dg~i~iwD~~t~~~-----~~~~~~~---- 207 (264)
.. ..+...+..+.+.+. ....+++++.||.|++||++.... ....+..
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 00 001112233333322 123388999999999999998642 1122222
Q ss_pred --------ceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 208 --------ENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 208 --------~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
.+.+++|+|++++|++|+.|+.|++||+.++.. ..++.+|...+++|
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK----LKTSEQLDQPISAC 321 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE----EEECCCCSSCEEEE
T ss_pred ccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE----EEEecCCCCCceEE
Confidence 478999999999999999999999999875432 34566777766654
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.92 E-value=4.9e-23 Score=183.32 Aligned_cols=224 Identities=20% Similarity=0.276 Sum_probs=170.9
Q ss_pred EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~ 94 (264)
.+.+.+ ...++++.|+.+++|+. .+.+..+.+|.+.|.+++|+ +++|++|+.||.|++|++... .....+.+
T Consensus 124 ~~~~~g-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~ 197 (445)
T 2ovr_B 124 CLQFCG-NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG---ECIHTLYG 197 (445)
T ss_dssp EEEEET-TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT---EEEEEECC
T ss_pred EEEEcC-CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC---cEEEEECC
Confidence 455555 45678999999999975 46677889999999999997 679999999999999998642 23345778
Q ss_pred ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-----------------eEEEeecCCCcEEEEEeccCCCccc
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-----------------IMLASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-----------------~~~~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
|...|.++.|++ ..+++++.||.|++||+++++.. ..+++++.|+.|.+|+++... .
T Consensus 198 h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~ 271 (445)
T 2ovr_B 198 HTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET---C 271 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTE---E
T ss_pred CCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCc---E
Confidence 999999999963 57999999999999999876422 146788999999999986532 2
Q ss_pred eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ecCceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TKGENINITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 158 ~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
...+.+|...|.++.| ++..+++++.||.|++||+++++..... +...+.++.+ +++++++|+.|+.|++||+
T Consensus 272 ~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 272 LHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDI 346 (445)
T ss_dssp EEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred eEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEEC
Confidence 3356789999999998 4568999999999999999988753332 2334555554 6789999999999999998
Q ss_pred ccCCCCCCCcccCcccceeeeee
Q psy9316 236 VKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 236 ~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+.+.... ......+|...+.++
T Consensus 347 ~~~~~~~-~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 347 KTGQCLQ-TLQGPNKHQSAVTCL 368 (445)
T ss_dssp TTCCEEE-EECSTTSCSSCEEEE
T ss_pred CCCcEEE-EEccCCCCCCCEEEE
Confidence 7643321 111223366666655
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.92 E-value=4.8e-23 Score=183.35 Aligned_cols=216 Identities=22% Similarity=0.309 Sum_probs=168.7
Q ss_pred eecCCCCCceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCC
Q psy9316 7 QFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84 (264)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~ 84 (264)
.+..+..+-..+...+. ..++++.|+.++.|+. .+.+..+.+|...|.+++| ++++|++|+.||.|++||+...
T Consensus 194 ~~~~h~~~v~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~- 269 (445)
T 2ovr_B 194 TLYGHTSTVRCMHLHEK-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE- 269 (445)
T ss_dssp EECCCSSCEEEEEEETT-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-
T ss_pred EECCCCCcEEEEEecCC-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-
Confidence 34444444444444443 4678899999999975 4566788899999999999 7899999999999999998652
Q ss_pred CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-----------------eEEEeecCCCcEEEE
Q psy9316 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-----------------IMLASGSFDKSVAIF 147 (264)
Q Consensus 85 ~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-----------------~~~~~~~~d~~i~i~ 147 (264)
.....+.+|...|.++.| ++.++++++.||.|++||+++++.. ..+++++.|+.|.+|
T Consensus 270 --~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw 344 (445)
T 2ovr_B 270 --TCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 344 (445)
T ss_dssp --EEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred --cEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEE
Confidence 223446789999999998 4578999999999999999876421 257889999999999
Q ss_pred EeccCCCccceEEEec---cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-------ecCceEEEEEcCC
Q psy9316 148 ALDKKGDLNKEVVYRG---HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-------TKGENINITWAPN 217 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~---h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-------~~~~~~~v~~sp~ 217 (264)
+++.... ...+.. |...|.++.|+ +.++++++.||.|++||+++++..... +.+.+.+++|+|+
T Consensus 345 d~~~~~~---~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 418 (445)
T 2ovr_B 345 DIKTGQC---LQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 418 (445)
T ss_dssp ETTTCCE---EEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred ECCCCcE---EEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCC
Confidence 9865432 223343 78899999996 368999999999999999998753322 2345889999999
Q ss_pred CCEEEEeeCCCe----EEEEEccc
Q psy9316 218 GNTIAVGNKEDL----VTFIDVVK 237 (264)
Q Consensus 218 g~~la~gs~d~~----i~~~d~~~ 237 (264)
+.++++|+.||. +.+||...
T Consensus 419 ~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 419 KLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEEEcccCCCCccEEEEEECCC
Confidence 999999999997 99999764
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=8.3e-24 Score=200.95 Aligned_cols=206 Identities=14% Similarity=0.219 Sum_probs=165.8
Q ss_pred cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 122 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~ 122 (264)
..+.+.+|.+.|.+++|+|++++|++++.||.|++|++... .....+..|...|.+++|+|++ .++++++.||.|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ---VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIR 80 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC---ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEE
Confidence 34567899999999999999999999999999999998642 2334567899999999999955 7899999999999
Q ss_pred EEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE
Q psy9316 123 IWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183 (264)
Q Consensus 123 vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s 183 (264)
+||+++++.. ..+++++.|+.|.+|+++.... ....+.+|...|.+++|+|.++..+++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE--EEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce--EEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 9999876421 2578899999999999875422 233567899999999999966679999
Q ss_pred EeCCCcEEEEeCCCCcceeEe--ec-CceEEEEEcC--CCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 184 ASGDKTVRIWDARTQKSQIIA--TK-GENINITWAP--NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 184 ~~~dg~i~iwD~~t~~~~~~~--~~-~~~~~v~~sp--~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
++.||.|++||+++....... .. ..+..++|+| ++++|++|+.|+.|++||+..+.. ..++.+|...++++
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~ 234 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC----VATLEGHMSNVSFA 234 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE----EEEEECCSSCEEEE
T ss_pred EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE----EEEEcCCCCCEEEE
Confidence 999999999999877643322 22 5678899999 999999999999999999875432 33456777666654
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=1.6e-23 Score=178.94 Aligned_cols=200 Identities=11% Similarity=0.048 Sum_probs=152.8
Q ss_pred ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCC-eEEEEeCCCcEEEE
Q psy9316 46 EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD-LLSTASGDKTVRIW 124 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~-~l~s~s~dg~i~vw 124 (264)
...+|.+.|.+++|+|++++|++++.|+.|++|++..............|...|.+++|+|+ +. ++++++.||.|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKV 84 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEE
Confidence 34589999999999999999999999999999999754322222345589999999999996 47 88999999999999
Q ss_pred EC-CCCCc-------------------ceEEEeecCCCcEEEEEecc---------CCCccceEEEeccccceeeEEEcC
Q psy9316 125 DA-RTQKS-------------------QIMLASGSFDKSVAIFALDK---------KGDLNKEVVYRGHTGSVDQLCWHA 175 (264)
Q Consensus 125 d~-~~~~~-------------------~~~~~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~h~~~i~~i~~~~ 175 (264)
|+ ++++. ...+++++.|+.|.+|+++. ...... ..|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN----TKVKNKIFTMDTNS 160 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS----SSSCCCEEEEEECS
T ss_pred EeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeE----EeeCCceEEEEecC
Confidence 99 65321 22577889999999999865 222221 23778999999987
Q ss_pred CCCCEEEEEeCCCcEEEEeCCC-Ccce--eE--eecCceEEEEEcC-CCCEEEEeeCCCeEEEEEcccC--CCCCCCccc
Q psy9316 176 TNPDLLSTASGDKTVRIWDART-QKSQ--II--ATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKS--LPPRERTLT 247 (264)
Q Consensus 176 ~~~~~i~s~~~dg~i~iwD~~t-~~~~--~~--~~~~~~~~v~~sp-~g~~la~gs~d~~i~~~d~~~~--~~~~~~~~~ 247 (264)
+. +++++.|+.|++||+++ .... .. .+...+.+++|+| +++++++|+.|+.+++||.... ....+....
T Consensus 161 ~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 43 88899999999999998 4421 11 2345688999999 9999999999999999998765 111233344
Q ss_pred Ccccce
Q psy9316 248 SRGHLM 253 (264)
Q Consensus 248 ~~~h~~ 253 (264)
+++|..
T Consensus 238 ~~~~~~ 243 (342)
T 1yfq_A 238 FRCHRL 243 (342)
T ss_dssp EECCCC
T ss_pred eecccc
Confidence 555543
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.5e-24 Score=203.97 Aligned_cols=184 Identities=13% Similarity=0.153 Sum_probs=147.8
Q ss_pred ccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECC
Q psy9316 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127 (264)
Q Consensus 48 ~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~ 127 (264)
.+|.+.|.+++|+|++++||+|+.||+|++|+... ... .....|...|.+++|+| + ++|++++.|++|++||++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~---~~~-~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ---VEV-VIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT---CEE-EEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC---cEE-EEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECC
Confidence 38999999999999999999999999999998643 111 12235788999999999 5 589999999999999998
Q ss_pred CCCcc------------------eEEEeecCCCcEEEEEeccCCCccce---------EEEeccccceeeEEEcCCCCCE
Q psy9316 128 TQKSQ------------------IMLASGSFDKSVAIFALDKKGDLNKE---------VVYRGHTGSVDQLCWHATNPDL 180 (264)
Q Consensus 128 ~~~~~------------------~~~~~~~~d~~i~i~~~~~~~~~~~~---------~~~~~h~~~i~~i~~~~~~~~~ 180 (264)
+++.. ..+++|+.|+.|++|+++.... ... ..+.+|..+|.+++|+|.+...
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~-~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL-SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE-EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc-ccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 75421 2578899999999999864321 100 1235788999999999976678
Q ss_pred EEEEeCCCcEEEEeCCCCcceeEe--e------------------cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 181 LSTASGDKTVRIWDARTQKSQIIA--T------------------KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t~~~~~~~--~------------------~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+++++.||.| +||+++.+..... + ...+.+++|+|+|++|++|+.|+.|++||++++.
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999999999 9999987643221 1 2458899999999999999999999999997654
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.9e-23 Score=182.92 Aligned_cols=194 Identities=15% Similarity=0.148 Sum_probs=153.4
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc----ccccccc--cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCc-
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQ--AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLN- 87 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~--~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~- 87 (264)
...+.|.+..+.++++.|+.+++|+.. +.++.+. .|...|.+++|+|++++|++|+.||.+.+|++.......
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~ 186 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF 186 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc
Confidence 346677776655788899999999754 4555665 567899999999999999999999999999986543322
Q ss_pred ccEEEecccccEEeEEEecC--CCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccc
Q psy9316 88 KEVVYRGHTGSVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 165 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~ 165 (264)
....+.+|...|.+++|+|+ ++.+|++++.|+.|++||+++++.... ...+|.
T Consensus 187 ~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~-------------------------~~~~h~ 241 (450)
T 2vdu_B 187 TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK-------------------------WLFGHK 241 (450)
T ss_dssp CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE-------------------------ECCCCS
T ss_pred cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee-------------------------eecCCC
Confidence 22245689999999999996 146899999999999999986542211 134688
Q ss_pred cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee---------------------------cCceEEEEEcCCC
Q psy9316 166 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---------------------------KGENINITWAPNG 218 (264)
Q Consensus 166 ~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---------------------------~~~~~~v~~sp~g 218 (264)
..|.+++|+ ++.+|++++.|+.|++||+++++...... ...+.+++|+|++
T Consensus 242 ~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 242 HFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 899999998 66899999999999999999887422221 1246789999999
Q ss_pred CEEEEee-CCCeEEEEEc
Q psy9316 219 NTIAVGN-KEDLVTFIDV 235 (264)
Q Consensus 219 ~~la~gs-~d~~i~~~d~ 235 (264)
++|++++ .|+.|++||+
T Consensus 320 ~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SEEEEEETTCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe
Confidence 9999999 8999999999
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=6.1e-23 Score=203.62 Aligned_cols=217 Identities=18% Similarity=0.297 Sum_probs=173.8
Q ss_pred eEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~ 93 (264)
..+.|.+. +.++++.|+.+++|+. .+.+..+.+|.+.|.+++|+|++++|++++.|+.|++||+... .....+.
T Consensus 621 ~~~s~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~---~~~~~~~ 696 (1249)
T 3sfz_A 621 ACFSQDGQ-RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG---KLVHTYD 696 (1249)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEE
T ss_pred EEECCCCC-EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC---ceEEEEc
Confidence 36666664 5678899999999975 4567788899999999999999999999999999999998652 2334577
Q ss_pred cccccEEeEEEecCC-CCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCC
Q psy9316 94 GHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKG 153 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~ 153 (264)
+|...|.+++|+|.+ ..++++++.||.|++||+++++.. ..+++++.|+.|.+|++....
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 899999999999863 457889999999999999875421 257889999999999975431
Q ss_pred Cccc----------------------------------------------------eEEEeccccceeeEEEcCCCCCEE
Q psy9316 154 DLNK----------------------------------------------------EVVYRGHTGSVDQLCWHATNPDLL 181 (264)
Q Consensus 154 ~~~~----------------------------------------------------~~~~~~h~~~i~~i~~~~~~~~~i 181 (264)
.... .....+|...|..++|+|+ +.++
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l 855 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY-DHLA 855 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS-TTEE
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC-CCEE
Confidence 1000 0011267788999999985 5688
Q ss_pred EEEeCCCcEEEEeCCCCccee--EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 182 STASGDKTVRIWDARTQKSQI--IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 182 ~s~~~dg~i~iwD~~t~~~~~--~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
++++.||.|++||+.++.... ..+...+.+++|+|+|++|++++.|+.+++||+..
T Consensus 856 ~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 856 VIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred EEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 999999999999999876532 23456789999999999999999999999999875
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=7.4e-23 Score=187.91 Aligned_cols=219 Identities=15% Similarity=0.216 Sum_probs=170.8
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc------ccccccccCCCC-EEEEEECC--CCCeEEEEECCCcEEEEEeccCC
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH------NDIKEYQAHGSK-VHSVAWSC--DGRRLASGSFDKSVAIFALDKKG 84 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~------~~~~~~~~h~~~-V~~l~~s~--~g~~l~s~s~dg~i~v~~~~~~~ 84 (264)
....+.|.+.. ++++. ++.+++|+.. +....+.+|.+. |.+++|+| ++++|++|+.||.|++|++....
T Consensus 22 ~~~~~spdg~~-l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~ 99 (615)
T 1pgu_A 22 THLSYDPTTNA-IAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 99 (615)
T ss_dssp CCCEEETTTTE-EEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred eEEEECCCCCE-EEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCc
Confidence 34477777764 34444 8888888653 567788999999 99999999 99999999999999999986320
Q ss_pred -----CCcccEEEecccccEEeEEEecCCCCeEEEEeCC----CcEEEEECCCCC------------------cceEEEe
Q psy9316 85 -----DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD----KTVRIWDARTQK------------------SQIMLAS 137 (264)
Q Consensus 85 -----~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d----g~i~vwd~~~~~------------------~~~~~~~ 137 (264)
.......+..|...|.+++|+|++ +++++++.+ +.|++||..... ....+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 100 ESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMT 178 (615)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred ccccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEE
Confidence 112233466799999999999965 678888877 789999843210 0126888
Q ss_pred ecCCCcEEEEEeccCCCccceEEEecccc---ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE------eecCc
Q psy9316 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTG---SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII------ATKGE 208 (264)
Q Consensus 138 ~~~d~~i~i~~~~~~~~~~~~~~~~~h~~---~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~------~~~~~ 208 (264)
++.|+.+.+|++... .....+..|.. .|.+++|+|+++.++++++.||.|++||+++++.... .+...
T Consensus 179 ~~~d~~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPF---KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp EETTTEEEEEETTTB---EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred EeCCCcEEEEeCCCc---ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc
Confidence 999999999997542 22345677888 9999999996467999999999999999998875332 34567
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 209 NINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 209 ~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+.+++|+ ++++|++++.|+.+++||++.+.
T Consensus 256 v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 256 IFALSWL-DSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence 8899999 99999999999999999987543
No 110
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1.4e-23 Score=182.16 Aligned_cols=208 Identities=14% Similarity=0.214 Sum_probs=146.9
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc-----cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN-----DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~-----~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~ 90 (264)
..+.|.+ .++++++.|+.+++|+... ....+.+|.+.|.+++|+|++++|++++.|+.|++|++..........
T Consensus 61 ~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 61 VDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EEECTTT-CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCE
T ss_pred EEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeee
Confidence 3566665 4667899999999997643 355677899999999999999999999999999999987644322234
Q ss_pred EEec-ccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEecccccee
Q psy9316 91 VYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 91 ~~~~-h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
.+.. |...|.+++|+|++ .++++++.|+.|++||++.............+..+.. ......+ .|...|.
T Consensus 140 ~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~v~ 209 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPF--------NTVCAEY-PSGGWVH 209 (377)
T ss_dssp EECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCE--------EEEEECC-CCSSSEE
T ss_pred EeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccch--------hhhhhcc-cCCceEE
Confidence 4566 99999999999954 7899999999999999975431100000000000000 0011123 7888999
Q ss_pred eEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc------eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 170 QLCWHATNPDLLSTASGDKTVRIWDARTQKS------QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~------~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+++|+|+ +.+|++++.||.|++||+++.+. ....+...+.+++|+|+|++|++|+.++.+ +|+..
T Consensus 210 ~~~~sp~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 210 AVGFSPS-GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEECTT-SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EEEECCC-CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999985 46888999999999999998764 122344568899999999999999977776 66654
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.9e-23 Score=200.63 Aligned_cols=239 Identities=12% Similarity=0.125 Sum_probs=161.9
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc--ccccccccC------------------CCCEEEEEECCCCCeEEEEECCCc
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAH------------------GSKVHSVAWSCDGRRLASGSFDKS 74 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h------------------~~~V~~l~~s~~g~~l~s~s~dg~ 74 (264)
...+.|.+....++++.|+.+ +|+.. +.++.+..| ...|.+++|+|+|++|++|+.|++
T Consensus 156 sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe
Confidence 446777655566788999999 99764 344555544 578999999999999999999999
Q ss_pred EEEEEeccCCCCcccEEE---e-------------cccccEEeEEEecC-------------------------------
Q psy9316 75 VAIFALDKKGDLNKEVVY---R-------------GHTGSVDQLCWHAT------------------------------- 107 (264)
Q Consensus 75 i~v~~~~~~~~~~~~~~~---~-------------~h~~~v~~i~~~~~------------------------------- 107 (264)
|++||+... .......+ . .|...|.+++|++.
T Consensus 235 i~lWd~~~g-~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~ 313 (902)
T 2oaj_A 235 LVFWDANSG-HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYT 313 (902)
T ss_dssp EEEEETTTC-CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEEC
T ss_pred EEEEECCCC-cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCC
Confidence 999998642 11100000 0 12234555555321
Q ss_pred -------------------------------------------------CCCeEEEEeCCCcEEEEECCCCC--------
Q psy9316 108 -------------------------------------------------NPDLLSTASGDKTVRIWDARTQK-------- 130 (264)
Q Consensus 108 -------------------------------------------------~~~~l~s~s~dg~i~vwd~~~~~-------- 130 (264)
++..+++++.||.+++||+.++.
T Consensus 314 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~ 393 (902)
T 2oaj_A 314 PRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLF 393 (902)
T ss_dssp CCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGS
T ss_pred CCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccC
Confidence 11134455566778888864331
Q ss_pred ----------------------------------------------------cceEEEeecCCCcEEEEEeccCCCcc--
Q psy9316 131 ----------------------------------------------------SQIMLASGSFDKSVAIFALDKKGDLN-- 156 (264)
Q Consensus 131 ----------------------------------------------------~~~~~~~~~~d~~i~i~~~~~~~~~~-- 156 (264)
....+++|+.|++|++|++... ...
T Consensus 394 ~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g-~~~~~ 472 (902)
T 2oaj_A 394 PQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHG-DIQDN 472 (902)
T ss_dssp CGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCC-TTTTT
T ss_pred CCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCc-cccCC
Confidence 1236788999999999998654 221
Q ss_pred ceEEE-------eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-----------------------------
Q psy9316 157 KEVVY-------RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----------------------------- 200 (264)
Q Consensus 157 ~~~~~-------~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~----------------------------- 200 (264)
..... .+|...|.+++|+|+ +.+||+|+.||+|+|||+.+.+.
T Consensus 473 ~~~~~~l~~~~~~~h~~~V~svafspd-g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 473 ASFEVNLSRTLNKAKELAVDKISFAAE-TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp BCEEEEHHHHTTCSSSCCEEEEEEETT-TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred ceEEeechhhcCCCCCCceeEEEecCC-CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 11111 178889999999995 57899999999999999976521
Q ss_pred ------------------eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCC-CcccCc-ccceeeeee
Q psy9316 201 ------------------QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRE-RTLTSR-GHLMETRSL 258 (264)
Q Consensus 201 ------------------~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~-~~~~~~-~h~~~~~~~ 258 (264)
.+..+.+.+.+++||||| +||+|+.|+.|++||++....... ....+. ||...|++|
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv 628 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCI 628 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEE
T ss_pred cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEE
Confidence 111245678999999999 999999999999999865332211 112344 887766664
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=1.1e-22 Score=201.77 Aligned_cols=201 Identities=26% Similarity=0.420 Sum_probs=160.1
Q ss_pred ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEE
Q psy9316 46 EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd 125 (264)
.+.+|.+.|.+++|+|+|++|++|+.||+|++|++... .....+.+|...|.+++|+|++ .++++++.||.|++||
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~---~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG---EKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWD 685 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC---CEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEE
Confidence 46789999999999999999999999999999998653 2234577899999999999955 7899999999999999
Q ss_pred CCCCCc---------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE
Q psy9316 126 ARTQKS---------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA 184 (264)
Q Consensus 126 ~~~~~~---------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~ 184 (264)
+++++. ...+++++.|+.|.+|+++... ....+.+|...|.+++|+|+ +.+++++
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~sp~-~~~l~s~ 761 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFSPD-DELLASC 761 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEEECSS-TTEEEEE
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEEEecC-CCEEEEE
Confidence 987642 1257889999999999986543 23356789999999999985 5689999
Q ss_pred eCCCcEEEEeCCCCcceeE---------------------------------------------------------eecC
Q psy9316 185 SGDKTVRIWDARTQKSQII---------------------------------------------------------ATKG 207 (264)
Q Consensus 185 ~~dg~i~iwD~~t~~~~~~---------------------------------------------------------~~~~ 207 (264)
+.||.|++||+++...... .+..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 9999999999976542110 1123
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 208 ENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 208 ~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
.+.+++|+|+++++++|+.|+.+++||+..+. ...++.+|...++++
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRL----KVADCRGHLSWVHGV 888 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTE----EEEEECCCSSCEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc----eeeecCCCccceEEE
Confidence 45678899999999999999999999987532 334566777766655
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2e-22 Score=182.61 Aligned_cols=176 Identities=11% Similarity=0.058 Sum_probs=138.4
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccc-----cEEeEEEecCCCCeEEEEeCCCcEEE
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG-----SVDQLCWHATNPDLLSTASGDKTVRI 123 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~-----~v~~i~~~~~~~~~l~s~s~dg~i~v 123 (264)
.|...|.+++|+|+|++||+++.||++++|+.+. ....+. |.. .|.+++|+|++ ++|++|+.||+|++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkI 155 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQF 155 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEE
Confidence 5678899999999999999999999999998432 222344 554 49999999955 78999999999999
Q ss_pred EECCCCCc---------------c-------------eEEEeecCCCcEEEEEeccCCCccceEEE-eccccceeeEEEc
Q psy9316 124 WDARTQKS---------------Q-------------IMLASGSFDKSVAIFALDKKGDLNKEVVY-RGHTGSVDQLCWH 174 (264)
Q Consensus 124 wd~~~~~~---------------~-------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~-~~h~~~i~~i~~~ 174 (264)
||++.+.. . ..+++++.|+.+++|++..+.......++ .+|...|.+++|+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 99987631 0 01568888999999998654421111234 4788899999998
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCcc-eeE-eecCceEEEEE--cCCCCEEEEeeCCCeEEEEEcc
Q psy9316 175 ATNPDLLSTASGDKTVRIWDARTQKS-QII-ATKGENINITW--APNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 175 ~~~~~~i~s~~~dg~i~iwD~~t~~~-~~~-~~~~~~~~v~~--sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+ ..+++++ +++|++||+.+++. ... .+...+..++| +|++..++++..||. ++|...
T Consensus 236 --g-~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 --D-YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp --T-TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred --C-CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 3 6888876 79999999998876 333 34556788999 999999999999999 999864
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=168.40 Aligned_cols=197 Identities=20% Similarity=0.403 Sum_probs=149.4
Q ss_pred EEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-
Q psy9316 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ- 132 (264)
Q Consensus 54 V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~- 132 (264)
+++|+|++++ +|++| .|++|++||+.+ +..........|...|.+++|+|++ +++++|+.||+|++||+++++..
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEE
Confidence 4679999875 66655 699999999875 3333333345788899999999955 78999999999999999875310
Q ss_pred -----------------------------------------------------------eEEEeecCCCcEEEEEeccCC
Q psy9316 133 -----------------------------------------------------------IMLASGSFDKSVAIFALDKKG 153 (264)
Q Consensus 133 -----------------------------------------------------------~~~~~~~~d~~i~i~~~~~~~ 153 (264)
..+++++.|+.|.+|+++...
T Consensus 104 ~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 104 NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred EecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 136788889999999986543
Q ss_pred Ccc-ceEEEeccccceeeEEEcCCCCCEE--EEEeCCCcEEEEeCCCCccee-EeecCceEEEEEcCCCCEEEEee--CC
Q psy9316 154 DLN-KEVVYRGHTGSVDQLCWHATNPDLL--STASGDKTVRIWDARTQKSQI-IATKGENINITWAPNGNTIAVGN--KE 227 (264)
Q Consensus 154 ~~~-~~~~~~~h~~~i~~i~~~~~~~~~i--~s~~~dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~~la~gs--~d 227 (264)
... .......|...|..+.++|.+..++ ++++.++.|++||.+...... ......+..+.|+|+++.+++++ .|
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC
Confidence 221 2234456778899999999877765 466788999999999887533 33455678899999999887765 79
Q ss_pred CeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 228 DLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 228 ~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+.|++||++++ +...+++||...|++|
T Consensus 264 ~~i~iwd~~~~----~~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 264 NQLVIWKYPTM----AKVAELKGHTSRVLSL 290 (318)
T ss_dssp CCEEEEETTTC----CEEEEECCCSSCEEEE
T ss_pred CEEEEEECCCC----cEEEEEcCCCCCEEEE
Confidence 99999998754 3445788999998886
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=3.4e-22 Score=171.07 Aligned_cols=169 Identities=12% Similarity=0.122 Sum_probs=113.6
Q ss_pred CCCCeEEEEE--CCCcEEEEEeccCCCCcccEEEecccccEEeEEEec--CCCCeEEEEeCCCcEEEEECCCCCcceE--
Q psy9316 61 CDGRRLASGS--FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA--TNPDLLSTASGDKTVRIWDARTQKSQIM-- 134 (264)
Q Consensus 61 ~~g~~l~s~s--~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~--~~~~~l~s~s~dg~i~vwd~~~~~~~~~-- 134 (264)
++++.+.+++ .|+.|++|++...+... ..+..|...+..++|++ .++.+|++++.|++|++||+++++....
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~--~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGK--ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEE--EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCcee--eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 3444444432 49999999986545432 23557888888888877 3457999999999999999998763211
Q ss_pred --------------------------------EEeecCCCcEEEEEeccCCCccceEE---EeccccceeeEEEcCCCCC
Q psy9316 135 --------------------------------LASGSFDKSVAIFALDKKGDLNKEVV---YRGHTGSVDQLCWHATNPD 179 (264)
Q Consensus 135 --------------------------------~~~~~~d~~i~i~~~~~~~~~~~~~~---~~~h~~~i~~i~~~~~~~~ 179 (264)
+++|+.|+++++|+....... .... ..+|...+....++ +.
T Consensus 221 g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l-~v~~~~~p~Gh~~~~lsg~~s---g~ 296 (356)
T 2w18_A 221 IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSV-GVMLYCLPPGQAGRFLEGDVK---DH 296 (356)
T ss_dssp CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEE-EEEEECCCTTCCCCEEEEEEE---TT
T ss_pred CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEE-EEEEeeccCCCcceeEccccC---CC
Confidence 256778888999987533211 1111 12454443333332 45
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeEe--ecCceE-EEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 180 LLSTASGDKTVRIWDARTQKSQIIA--TKGENI-NITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 180 ~i~s~~~dg~i~iwD~~t~~~~~~~--~~~~~~-~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
++++++.||+|+|||+.+++..... +...+. .++|||||++|++|+.|++|++||+
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 7899999999999999999853332 333344 5899999999999999999999995
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.8e-21 Score=170.42 Aligned_cols=165 Identities=14% Similarity=0.099 Sum_probs=129.9
Q ss_pred cCCCCEEEEEECCCCCeE-EEEECCCcEEEEEecc-CCCCcccEEEe--cccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 49 AHGSKVHSVAWSCDGRRL-ASGSFDKSVAIFALDK-KGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l-~s~s~dg~i~v~~~~~-~~~~~~~~~~~--~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
+|.+.|.+++|+|++++| ++++.||.|++|++.. .+... ..+. .|...|.+++|+|++ .+|++++.||.+++|
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL--KLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSI 176 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE--EEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee--eeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEE
Confidence 345579999999999996 8899999999999872 12222 2233 567889999999955 788899999999999
Q ss_pred ECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC--CCCEEEEEeCCCcEEEEeCCCCccee
Q psy9316 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQKSQI 202 (264)
Q Consensus 125 d~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~--~~~~i~s~~~dg~i~iwD~~t~~~~~ 202 (264)
|+.+.+.... ....+.+|...|.+++|+|+ ++.+|++++.|+.|++||++++....
T Consensus 177 ~~~~~~~~~~----------------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 177 DINSIPEEKF----------------------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD 234 (450)
T ss_dssp ETTSCCCSSC----------------------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE
T ss_pred ecCCcccccc----------------------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee
Confidence 9976542210 01123568889999999986 25689999999999999999877533
Q ss_pred E---eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 203 I---ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 203 ~---~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
. .+...+.+++|+ ++++|++|+.|+.|++||+.++.
T Consensus 235 ~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 235 KWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred eeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 2 345678999999 99999999999999999988654
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=8.8e-23 Score=177.95 Aligned_cols=204 Identities=10% Similarity=0.071 Sum_probs=137.8
Q ss_pred ccccCCCCEEEEEECCCCCeEEEE-----------ECCCcEEEEEeccCCCCccc-EE-----EecccccEEeEEEecCC
Q psy9316 46 EYQAHGSKVHSVAWSCDGRRLASG-----------SFDKSVAIFALDKKGDLNKE-VV-----YRGHTGSVDQLCWHATN 108 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~g~~l~s~-----------s~dg~i~v~~~~~~~~~~~~-~~-----~~~h~~~v~~i~~~~~~ 108 (264)
.+..|...|.+++++ ++.+++| +.|+.+++|+++........ .. ...+...+..++|+|++
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 356788888888765 5666665 35788999998753321110 00 11234558899999976
Q ss_pred CCeE-EEEeCCCcEEEEECCCCCcc------------------eEEEeecCCCcEEEEEeccCCCccceEEEecccccee
Q psy9316 109 PDLL-STASGDKTVRIWDARTQKSQ------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 109 ~~~l-~s~s~dg~i~vwd~~~~~~~------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
..++ ++++.|++|++||+++.+.. ..+++++ ++.+.+|+...... ........|...|.
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSC-IARKTDFDKNWSLS 223 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCE-EEEECCCCTTEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcc-eeeeecCCCCCCEE
Confidence 4432 35557999999999876432 1355555 44556665433221 11223456888899
Q ss_pred eEEEcCCCCCEEEEEeCCC----cEEEEeCCCCccee------EeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 170 QLCWHATNPDLLSTASGDK----TVRIWDARTQKSQI------IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg----~i~iwD~~t~~~~~------~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+++|+|++ .++++++.|+ .+++||+....... ..+...+.+++|||+|++||+|+.|+.|++||+.++.
T Consensus 224 ~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 224 KINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 99999854 6777888777 68889988765322 1223568899999999999999999999999987643
Q ss_pred CCCCCccc-Ccccceeeeee
Q psy9316 240 PPRERTLT-SRGHLMETRSL 258 (264)
Q Consensus 240 ~~~~~~~~-~~~h~~~~~~~ 258 (264)
.. .+ +.||...|++|
T Consensus 303 ~~----~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 303 MS----KIFKQAHSFAITEV 318 (365)
T ss_dssp EE----EEETTSSSSCEEEE
T ss_pred EE----EEecCcccCCEEEE
Confidence 32 23 57899888876
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.2e-21 Score=163.87 Aligned_cols=202 Identities=9% Similarity=0.043 Sum_probs=143.7
Q ss_pred EEEeecCceEEecccccc-----------ccccc-cCCCCEEEEEECC--CCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 26 HLVCKIDDYVKHFNTHND-----------IKEYQ-AHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 26 ~~~~~~d~~~~~~~~~~~-----------~~~~~-~h~~~V~~l~~s~--~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
.++++.|+.++.|..... ++.+. +|.+.|.+++|+| +++++++++.||+|++||+.... . ...
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~--~~~ 164 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-Q--YIV 164 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-E--EEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-E--EEE
Confidence 467888999998854322 22332 6678999999999 99999999999999999987532 2 122
Q ss_pred E-ecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc---------------------eEEEeecCCCcEEEEEe
Q psy9316 92 Y-RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ---------------------IMLASGSFDKSVAIFAL 149 (264)
Q Consensus 92 ~-~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~---------------------~~~~~~~~d~~i~i~~~ 149 (264)
. ..|...+.+++|+|++ .++++|+.||.|++||+++++.. ..+++++ ++.|++||+
T Consensus 165 ~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 165 HSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp ECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred EecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 3 3456679999999954 78999999999999999875432 1466777 559999999
Q ss_pred ccCCCccceEEEecccccee--eEEEcCCCCCEEEEEeC-CCcEEEEeCCCCcceeEeecCceEEEEEcC---CCCEEEE
Q psy9316 150 DKKGDLNKEVVYRGHTGSVD--QLCWHATNPDLLSTASG-DKTVRIWDARTQKSQIIATKGENINITWAP---NGNTIAV 223 (264)
Q Consensus 150 ~~~~~~~~~~~~~~h~~~i~--~i~~~~~~~~~i~s~~~-dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp---~g~~la~ 223 (264)
+..........+..|...+. +++|+|+ +.+|++++. |+.+++|+++........ ..+..++|+| +++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~s~~d~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 319 (343)
T 3lrv_A 243 RKDVGTLAYPTYTIPEFKTGTVTYDIDDS-GKNMIAYSNESNSLTIYKFDKKTKNWTK--DEESALCLQSDTADFTDMDV 319 (343)
T ss_dssp TSSTTCBSSCCCBC-----CCEEEEECTT-SSEEEEEETTTTEEEEEEECTTTCSEEE--EEEEECCC----CCCCEEEE
T ss_pred CCCCcceeecccccccccccceEEEECCC-CCEEEEecCCCCcEEEEEEcccccceEe--cCceeEecCccccccceeEE
Confidence 86544332222223444444 5999985 568888888 999999999765532222 4456778888 8999999
Q ss_pred eeCCCeEEEEEc
Q psy9316 224 GNKEDLVTFIDV 235 (264)
Q Consensus 224 gs~d~~i~~~d~ 235 (264)
++.|+.+.++--
T Consensus 320 ~~~d~~~~~~~~ 331 (343)
T 3lrv_A 320 VCGDGGIAAILK 331 (343)
T ss_dssp EEETTEEEEEEE
T ss_pred EecCCceEEEEe
Confidence 999999988853
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.5e-22 Score=176.59 Aligned_cols=194 Identities=12% Similarity=0.109 Sum_probs=131.7
Q ss_pred CCCCeEEEEECCCcEEEEEeccCCCCcc--cEEEecccccEEeEEEec-------CCCCeEEEEeCCCcEEEEECCCCCc
Q psy9316 61 CDGRRLASGSFDKSVAIFALDKKGDLNK--EVVYRGHTGSVDQLCWHA-------TNPDLLSTASGDKTVRIWDARTQKS 131 (264)
Q Consensus 61 ~~g~~l~s~s~dg~i~v~~~~~~~~~~~--~~~~~~h~~~v~~i~~~~-------~~~~~l~s~s~dg~i~vwd~~~~~~ 131 (264)
+++.+|++|+.|++|++|++........ ...+.+|.+.|.+++|+| .++++|+++|.|++|++||++++..
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 4566899999999999999875322111 112568999999999987 2457999999999999999976431
Q ss_pred --------------------ceEEEeecCCCcEEEEEeccCCCccc----------------------eEEEecccccee
Q psy9316 132 --------------------QIMLASGSFDKSVAIFALDKKGDLNK----------------------EVVYRGHTGSVD 169 (264)
Q Consensus 132 --------------------~~~~~~~~~d~~i~i~~~~~~~~~~~----------------------~~~~~~h~~~i~ 169 (264)
...+++++.|+.|++||++....... .....+|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 12588999999999999865432110 011246778899
Q ss_pred eEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecC------------------ceEEEEEcC--CCCEEEEeeCC
Q psy9316 170 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKG------------------ENINITWAP--NGNTIAVGNKE 227 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~------------------~~~~v~~sp--~g~~la~gs~d 227 (264)
.+.|.+.++..|++++.|+.+++||+.+...... .+.. ......|+| ++.++++|+.|
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence 9999866778999999999999999987542111 1111 112234444 44567888999
Q ss_pred CeEEEEEcccCCCCCCCcccCcccceeeeee
Q psy9316 228 DLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258 (264)
Q Consensus 228 ~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~ 258 (264)
+.|++||+..+.. ...+.+|...|++|
T Consensus 339 g~V~lwd~~~~~~----~~~~~~~~~~V~sv 365 (393)
T 4gq1_A 339 GLIQLINTYEKDS----NSIPIQLGMPIVDF 365 (393)
T ss_dssp TEEEEEETTCTTC----CEEEEECSSCEEEE
T ss_pred CEEEEEECCCCcE----EEEecCCCCcEEEE
Confidence 9999999876543 34566777777765
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=3.5e-20 Score=163.65 Aligned_cols=215 Identities=13% Similarity=0.164 Sum_probs=161.3
Q ss_pred eEeecCCCeeEEEeecCceEEecccc--cccc-----ccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcc
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIK-----EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~-----~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~ 88 (264)
..+.| +..+.+++..++.++.|+.. +..+ .+.+|.+.|.+++|+|+++++++++.|+.|++|++.... .
T Consensus 128 ~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~---~ 203 (433)
T 3bws_A 128 VRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA---Y 203 (433)
T ss_dssp CEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC---E
T ss_pred EEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce---E
Confidence 36667 66666667778888888754 3333 456899999999999999999999999999999986422 2
Q ss_pred cEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc------------------eEEEeec--------CCC
Q psy9316 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ------------------IMLASGS--------FDK 142 (264)
Q Consensus 89 ~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~------------------~~~~~~~--------~d~ 142 (264)
...+..|...+.+++|+|++..++++++.|+.|++||+++++.. ..+++++ .|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 23456788899999999977555566668999999999865321 1234444 477
Q ss_pred cEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-EeecCceEEEEEcCCCCEE
Q psy9316 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-IATKGENINITWAPNGNTI 221 (264)
Q Consensus 143 ~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~~l 221 (264)
.|.+|+++... ......|...+..++|+|++..++++++.|+.|++||+++++... ......+.+++|+|+|++|
T Consensus 284 ~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 284 RLGIYSMDKEK----LIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYL 359 (433)
T ss_dssp EEEEEETTTTE----EEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred eEEEEECCCCc----EEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEE
Confidence 88899876432 122234556788999999776678888999999999999876532 2344567899999999999
Q ss_pred EEeeC---------------CCeEEEEEcccC
Q psy9316 222 AVGNK---------------EDLVTFIDVVKS 238 (264)
Q Consensus 222 a~gs~---------------d~~i~~~d~~~~ 238 (264)
++++. ||.|++||+.++
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EEEecCCCccccccccccccceEEEEEECCCC
Confidence 88887 469999998653
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=4.2e-20 Score=160.27 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=141.7
Q ss_pred ceEeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCC-----------------------------
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDG----------------------------- 63 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g----------------------------- 63 (264)
...+.+.++.+.++++.|+.+++|+. .+.+.++. |.+.|.++.|+++.
T Consensus 63 ~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 141 (355)
T 3vu4_A 63 KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGG 141 (355)
T ss_dssp EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEE
T ss_pred EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCc
Confidence 34556666655567788889999975 34455554 66688888888653
Q ss_pred ------CeEEE--EECCCcEEEEEeccCCCC------------cc-cEEEecccccEEeEEEecCCCCeEEEEeCCCc-E
Q psy9316 64 ------RRLAS--GSFDKSVAIFALDKKGDL------------NK-EVVYRGHTGSVDQLCWHATNPDLLSTASGDKT-V 121 (264)
Q Consensus 64 ------~~l~s--~s~dg~i~v~~~~~~~~~------------~~-~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~-i 121 (264)
.+++. |+.||.|++||+...... .. ...+.+|...|.+++|+|+ +.+|++++.||+ |
T Consensus 142 ~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 142 VCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTII 220 (355)
T ss_dssp EEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEE
T ss_pred eEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEE
Confidence 23333 467788888887642200 01 3457899999999999995 479999999998 9
Q ss_pred EEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEe-c-cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q psy9316 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR-G-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 199 (264)
Q Consensus 122 ~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~-~-h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~ 199 (264)
++||+++++... .+. + |...|.+++|+|+ +.+|++++.|++|++||++...
T Consensus 221 ~iwd~~~~~~~~--------------------------~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 221 RVFKTEDGVLVR--------------------------EFRRGLDRADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEETTTCCEEE--------------------------EEECTTCCSCEEEEEECTT-SCEEEEEETTCEEEEEESSCCS
T ss_pred EEEECCCCcEEE--------------------------EEEcCCCCCcEEEEEECCC-CCEEEEEECCCEEEEEEccCCC
Confidence 999998754321 233 4 8889999999985 5789999999999999997653
Q ss_pred cee-Ee---------------------ec---CceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 200 SQI-IA---------------------TK---GENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 200 ~~~-~~---------------------~~---~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
... .. .. .....++|+|+|++|++++.||.+++|++..+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 274 DNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred CcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 110 00 00 1125689999999999999999999999876544
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.87 E-value=2.6e-19 Score=155.96 Aligned_cols=220 Identities=16% Similarity=0.143 Sum_probs=157.9
Q ss_pred ecCCCCCce-EeecCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccC
Q psy9316 8 FHTPKSPEY-KLLPSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKK 83 (264)
Q Consensus 8 ~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~ 83 (264)
+..+..+.. .+.|.+..+.+++..|+.++.|+. .+.+..+..+. .+.+++|+|++++|+.++ .|+.|++||+...
T Consensus 28 ~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 28 IPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp EECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred eecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 333444433 677777766567778999999975 34555565554 899999999999886655 6799999998642
Q ss_pred CCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcE
Q psy9316 84 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSV 144 (264)
Q Consensus 84 ~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i 144 (264)
. ....+. +...+.+++|+|++..++++++.|+.|++||+++++.. .++++++.++.|
T Consensus 107 ~---~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 107 T---VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp E---EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred e---EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 2 122233 34568999999977555578888999999999875421 234677888999
Q ss_pred EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe---CCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCE
Q psy9316 145 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS---GDKTVRIWDARTQKSQII-ATKGENINITWAPNGNT 220 (264)
Q Consensus 145 ~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~---~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~ 220 (264)
.+|+++.... .....+...+..++|+|++. ++++++ .++.|++||+++++.... .....+.+++|+|+|++
T Consensus 183 ~~~d~~~~~~----~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 183 SVIDTVTNSV----IDTVKVEAAPSGIAVNPEGT-KAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKK 257 (391)
T ss_dssp EEEETTTTEE----EEEEECSSEEEEEEECTTSS-EEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSE
T ss_pred EEEECCCCeE----EEEEecCCCccceEECCCCC-EEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCE
Confidence 9999865321 12223556788999998654 555555 799999999998765322 23345778999999998
Q ss_pred E-EEeeCCCeEEEEEccc
Q psy9316 221 I-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 221 l-a~gs~d~~i~~~d~~~ 237 (264)
| ++++.|+.+++||+..
T Consensus 258 l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEEcCCCCEEEEEECCC
Confidence 8 6668899999999875
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.1e-20 Score=171.30 Aligned_cols=199 Identities=15% Similarity=0.154 Sum_probs=146.9
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccccccccccCCC-----CEEEEEECCCCCeEEEEECCCcEEEEEeccCCCC-c
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGS-----KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL-N 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~h~~-----~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~-~ 87 (264)
...++.|.|. .+++++.|+.+++|+....+..+. |.. .|.+++|+|||++|++|+.||+|++|++... .. .
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~-~l~~ 165 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN-SENT 165 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC-TTTC
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC-cccc
Confidence 4447777775 456789999999998766777777 665 4999999999999999999999999998753 22 0
Q ss_pred ----ccEEE----ecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc---------------------eEEEee
Q psy9316 88 ----KEVVY----RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ---------------------IMLASG 138 (264)
Q Consensus 88 ----~~~~~----~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~---------------------~~~~~~ 138 (264)
....+ .+|.+.|.+++|+|++ +++++.|+.+++||+..++.. ..++++
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa 242 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLT 242 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEE
Confidence 12333 5678899999999955 778899999999999765421 134555
Q ss_pred cCCCcEEEEEeccCCCccceEEE-eccccceeeEEE--cCCCCCEEEEEeCCCcEEEEeCCCCc----------------
Q psy9316 139 SFDKSVAIFALDKKGDLNKEVVY-RGHTGSVDQLCW--HATNPDLLSTASGDKTVRIWDARTQK---------------- 199 (264)
Q Consensus 139 ~~d~~i~i~~~~~~~~~~~~~~~-~~h~~~i~~i~~--~~~~~~~i~s~~~dg~i~iwD~~t~~---------------- 199 (264)
+ ++.|++|++... ....+ .+|.+.|..+.| +|+ +..++++++||. ++|....-.
T Consensus 243 ~-~~tIkLWd~~~~----~~~~~~~gh~~~V~~va~~~s~d-~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~ 315 (588)
T 2j04_A 243 C-PGYVHKIDLKNY----SISSLKTGSLENFHIIPLNHEKE-STILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFK 315 (588)
T ss_dssp C-SSEEEEEETTTT----EEEEEECSCCSCCCEEEETTCSS-CEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHH
T ss_pred e-CCeEEEEECCCC----eEEEEEcCCCceEEEEEeeeCCC-CCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEE
Confidence 5 689999997532 12122 389999999999 774 467889999999 999863100
Q ss_pred --------ceeEeecCceEEEEEcCCCCEEEEee
Q psy9316 200 --------SQIIATKGENINITWAPNGNTIAVGN 225 (264)
Q Consensus 200 --------~~~~~~~~~~~~v~~sp~g~~la~gs 225 (264)
.........+.+++|||||+.+|+++
T Consensus 316 lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 316 KWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp HTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred EEECCCCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 00000112367799999999999988
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.86 E-value=1.9e-19 Score=156.81 Aligned_cols=205 Identities=12% Similarity=0.106 Sum_probs=151.5
Q ss_pred eEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeE-EEEECCCcEEEEEeccCCCCcccEEEecccccEEe
Q psy9316 25 FHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRL-ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101 (264)
Q Consensus 25 ~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l-~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~ 101 (264)
+.++++.|+.++.|+.. +.+..+..|. .+.+++|+|++++| ++++.|+.|++||+... . ....+..+ ..+.+
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-~--~~~~~~~~-~~v~~ 78 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-N--VIATVPAG-SSPQG 78 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-E--EEEEEECS-SSEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC-e--EEEEEECC-CCccc
Confidence 34567789999999753 4556666664 58999999999987 56668999999998642 2 22233333 38999
Q ss_pred EEEecCCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceEEEe
Q psy9316 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYR 162 (264)
Q Consensus 102 i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~ 162 (264)
++|+|++..++++++.|+.|++||+++++.. .++++++.++.|.+|++..... ...+.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~ 155 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTVS 155 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEe
Confidence 9999977555566667899999999875421 1346778899999999764321 12223
Q ss_pred ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEee---CCCeEEEEEcccC
Q psy9316 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGN---KEDLVTFIDVVKS 238 (264)
Q Consensus 163 ~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs---~d~~i~~~d~~~~ 238 (264)
.+ ..+..++|+|++..++++++.++.|++||+++.+.... .....+.+++|+|+|++|++++ .++.|++||+..+
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 33 46789999997665667888999999999998875332 3345678899999999999888 6899999998754
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.85 E-value=1.1e-20 Score=161.81 Aligned_cols=158 Identities=13% Similarity=0.036 Sum_probs=114.5
Q ss_pred cCceEEeccc---cccccccccCCCCEEEEEECC---CCCeEEEEECCCcEEEEEeccCCCCcccEEEeccc---ccEEe
Q psy9316 31 IDDYVKHFNT---HNDIKEYQAHGSKVHSVAWSC---DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT---GSVDQ 101 (264)
Q Consensus 31 ~d~~~~~~~~---~~~~~~~~~h~~~V~~l~~s~---~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~---~~v~~ 101 (264)
.|+.|+.|.. +..+..+.+|...+..++|+| ++++|++|+.|++|++||+.+. .. ...+.+|. ..+.+
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG-k~--l~tL~g~~~~v~~v~~ 231 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG-QL--LKKMHIDDSYQASVCH 231 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC-CE--EEEEECCC---CCCEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC-cE--EEEEcCCCcceeeeEE
Confidence 4888888765 344566778988899999998 7799999999999999998753 22 23455443 35677
Q ss_pred EEEecCCCCe-----------EEEEeCCCcEEEEECCCCCcc----------------------eEEEeecCCCcEEEEE
Q psy9316 102 LCWHATNPDL-----------LSTASGDKTVRIWDARTQKSQ----------------------IMLASGSFDKSVAIFA 148 (264)
Q Consensus 102 i~~~~~~~~~-----------l~s~s~dg~i~vwd~~~~~~~----------------------~~~~~~~~d~~i~i~~ 148 (264)
++|+|++..+ +++|+.|+++++||.++++.. ..+++++.|++|+|||
T Consensus 232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEE
Confidence 7899865322 367889999999998876421 1367888999999999
Q ss_pred eccCCCccceEEEecccccee-eEEEcCCCCCEEEEEeCCCcEEEEeC
Q psy9316 149 LDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASGDKTVRIWDA 195 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~h~~~i~-~i~~~~~~~~~i~s~~~dg~i~iwD~ 195 (264)
+...... .++.+|...+. .++|+|+ +.+|+||+.|++|+|||+
T Consensus 312 l~tGk~l---~tL~gH~~~vvs~vafSPD-G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCT---ALLPPVSDQHWSFVKWSGT-DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEE---EEECCC--CCCCEEEECSS-SSEEEEECTTSCEEEEEE
T ss_pred CCCCcEE---EEecCCCCCeEEEEEECCC-CCEEEEEECCCcEEEecC
Confidence 9764322 34667877655 5899995 578999999999999995
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=4.6e-18 Score=150.61 Aligned_cols=217 Identities=13% Similarity=0.133 Sum_probs=151.8
Q ss_pred ceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCC---cEEEEEeccCCCCcccEEEecccccEEeEEEecCC
Q psy9316 33 DYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDK---SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108 (264)
Q Consensus 33 ~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg---~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 108 (264)
+.+++|+.. ...+.+.+|.+.|.+++|+|||++|++++.|+ .|++||+.. +.. ..+..|...+.+++|+|++
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-g~~---~~l~~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-GAV---RQVASFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CCE---EEEECCSSCEEEEEECTTS
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-CcE---EEeecCCCcccCEEEcCCC
Confidence 678888653 45677888999999999999999999999885 999999864 222 2355678889999999977
Q ss_pred CCeEEEEeCCCc--EEEEECCCCCcc------------------eEEEeec-CCCcEEEEEeccCCCccceEEEeccccc
Q psy9316 109 PDLLSTASGDKT--VRIWDARTQKSQ------------------IMLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGS 167 (264)
Q Consensus 109 ~~~l~s~s~dg~--i~vwd~~~~~~~------------------~~~~~~~-~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 167 (264)
..++++++.|+. |++||+++++.. ..++.++ .++...||.++..+.. ...+..+...
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~ 312 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQ 312 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSE
T ss_pred CEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCc
Confidence 545557777665 999999875421 1233333 3555455544332221 1223345567
Q ss_pred eeeEEEcCCCCCEEEEEeCC---CcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCCC---eEEEEEcccCCCC
Q psy9316 168 VDQLCWHATNPDLLSTASGD---KTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKED---LVTFIDVVKSLPP 241 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~d---g~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d~---~i~~~d~~~~~~~ 241 (264)
+..++|+|++ .+|++++.+ +.|++||+.+++.........+.+++|+|+|++|++++.++ .|++||+...
T Consensus 313 ~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~--- 388 (415)
T 2hqs_A 313 NQDADVSSDG-KFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR--- 388 (415)
T ss_dssp EEEEEECTTS-SEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC---
T ss_pred ccCeEECCCC-CEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC---
Confidence 8899999965 555555543 58999999988754333333678899999999999998887 8999997532
Q ss_pred CCCcccCcccceeeeee-ccc
Q psy9316 242 RERTLTSRGHLMETRSL-WGT 261 (264)
Q Consensus 242 ~~~~~~~~~h~~~~~~~-~~~ 261 (264)
+..++.+|..+++++ |+.
T Consensus 389 --~~~~l~~~~~~v~~~~~~~ 407 (415)
T 2hqs_A 389 --FKARLPATDGQVKFPAWSP 407 (415)
T ss_dssp --CEEECCCSSSEEEEEEECC
T ss_pred --cEEEeeCCCCCCcCCcccc
Confidence 223566787888764 543
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=3.4e-19 Score=158.94 Aligned_cols=162 Identities=17% Similarity=0.279 Sum_probs=122.2
Q ss_pred CCCCEEEEEECCCCCeEE----EEECCCcEEEEEeccC-----C---CCcccEEEecccccEEeEEEecCCCCeEEEEeC
Q psy9316 50 HGSKVHSVAWSCDGRRLA----SGSFDKSVAIFALDKK-----G---DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 117 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~----s~s~dg~i~v~~~~~~-----~---~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~ 117 (264)
|.+.|.+++|+|++++|+ +|+.|+.|++||+... . .......+.+|...|.+++|+|.++.++++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 556799999999999999 7889999999998653 1 111123355799999999999986789999999
Q ss_pred CCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q psy9316 118 DKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 197 (264)
Q Consensus 118 dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t 197 (264)
||+|++||++++... ....+|...|.+++|+|+ +.+|++|+.||.|++||++.
T Consensus 171 Dg~v~iwD~~~~~~~--------------------------~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v~iwd~~~ 223 (434)
T 2oit_A 171 DGSIAVLQVTETVKV--------------------------CATLPSTVAVTSVCWSPK-GKQLAVGKQNGTVVQYLPTL 223 (434)
T ss_dssp TSCEEEEEESSSEEE--------------------------EEEECGGGCEEEEEECTT-SSCEEEEETTSCEEEECTTC
T ss_pred CCeEEEEEcCCCcce--------------------------eeccCCCCceeEEEEcCC-CCEEEEEcCCCcEEEEccCC
Confidence 999999999864211 112457789999999996 57888999999999999983
Q ss_pred CcceeE-eec-------CceEEEEEcCCCCEEEEe-eCCC------eEEEEEcccC
Q psy9316 198 QKSQII-ATK-------GENINITWAPNGNTIAVG-NKED------LVTFIDVVKS 238 (264)
Q Consensus 198 ~~~~~~-~~~-------~~~~~v~~sp~g~~la~g-s~d~------~i~~~d~~~~ 238 (264)
...... .+. ..+.+++|++++.++++. +.|| .+++||+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 222111 111 157789999998888554 3443 3899998864
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.82 E-value=1.6e-17 Score=146.45 Aligned_cols=205 Identities=9% Similarity=0.079 Sum_probs=151.2
Q ss_pred CCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEeccccc
Q psy9316 22 GSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGS 98 (264)
Q Consensus 22 ~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~ 98 (264)
++.+.+++..|+.++.|+.. +.+..+..|...+.+++|+|++++++.++ .|+.|++||+... . ....+. +...
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~--~~~~~~-~~~~ 255 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-L--EIRKTD-KIGL 255 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-E--EEEECC-CCSE
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-c--EEEEec-CCCC
Confidence 34566778889999999753 45667778999999999999999886555 7999999998642 1 112233 3355
Q ss_pred EEeEEEecCCCCeEEEEe--------CCCcEEEEECCCCCc-------------------ceEEEeecCCCcEEEEEecc
Q psy9316 99 VDQLCWHATNPDLLSTAS--------GDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFALDK 151 (264)
Q Consensus 99 v~~i~~~~~~~~~l~s~s--------~dg~i~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~ 151 (264)
+.+++|+|++ ..+++++ .||.|++||+++++. ..++++++.++.+.+|+++.
T Consensus 256 ~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 256 PRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp EEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 8999999966 5666666 588999999987532 12456778899999999864
Q ss_pred CCCccceEEEeccccceeeEEEcCCCCCEEEEEeC---------------CCcEEEEeCCCCcceeE-eecCceEEEEEc
Q psy9316 152 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG---------------DKTVRIWDARTQKSQII-ATKGENINITWA 215 (264)
Q Consensus 152 ~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~---------------dg~i~iwD~~t~~~~~~-~~~~~~~~v~~s 215 (264)
... .....+...+..++|+|++ .++++++. ||.|++||+.+.+.... .....+.+++|+
T Consensus 335 ~~~----~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s 409 (433)
T 3bws_A 335 KKV----QKSIPVFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVS 409 (433)
T ss_dssp TEE----EEEEECSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred CcE----EEEecCCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEc
Confidence 221 1122356788999999865 45555555 57999999998775332 234567899999
Q ss_pred CCCCEEEEeeC-CCeEEEEEcc
Q psy9316 216 PNGNTIAVGNK-EDLVTFIDVV 236 (264)
Q Consensus 216 p~g~~la~gs~-d~~i~~~d~~ 236 (264)
|+|++|++++. |+.|++|++.
T Consensus 410 ~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 410 PDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TTSCEEEEEETTTTEEEEEEET
T ss_pred CCCCEEEEEECCCCeEEEEEec
Confidence 99999988875 9999999975
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=6.7e-19 Score=157.02 Aligned_cols=182 Identities=17% Similarity=0.236 Sum_probs=128.2
Q ss_pred ceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCC-------CcccE-----EEecccccEE
Q psy9316 33 DYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD-------LNKEV-----VYRGHTGSVD 100 (264)
Q Consensus 33 ~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~-------~~~~~-----~~~~h~~~v~ 100 (264)
+.++++..... .+...++.|++++++.+|++++.|+ +++|+...... ..... ..-.+...|.
T Consensus 23 ~~vri~~~~~~-----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPEE-----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCSS-----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCccc-----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 34566544322 2344678999999999999999988 88887542100 00000 1113556799
Q ss_pred eEEEecCCCCeEE----EEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC
Q psy9316 101 QLCWHATNPDLLS----TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 176 (264)
Q Consensus 101 ~i~~~~~~~~~l~----s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~ 176 (264)
+++|+|++ ++|+ +++.|+.|++||+++.... ... ....+.....+.+|...|.+++|+|.
T Consensus 97 ~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~------~~~---------~~~~~~~~~~~~~h~~~V~~v~~~p~ 160 (434)
T 2oit_A 97 HLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNE------AKQ---------QKRPFAYHKLLKDAGGMVIDMKWNPT 160 (434)
T ss_dssp EEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCT------TCS---------SCCCSEEEECCCSGGGSEEEEEECSS
T ss_pred EEEEcCCC-CEEEEEEeccCCCceEEEEEccccccC------CcC---------CcceeeeeeccCCCCCceEEEEECCC
Confidence 99999965 5666 7888999999998653100 000 00001111234578899999999998
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 177 NPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 177 ~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
++.+|++++.||+|++||++++..... .+...+.+++|+|+|++|++|+.|+.|++||++
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 778999999999999999998754222 234568999999999999999999999999987
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=1.7e-15 Score=128.70 Aligned_cols=224 Identities=11% Similarity=0.129 Sum_probs=143.7
Q ss_pred ecCCCCCc-eEeecCCCeeEEEeecC-ceEEecccc----c--cccccccCCCCEEEEEECCCCCeEEEEEC-CCcEEEE
Q psy9316 8 FHTPKSPE-YKLLPSGSQFHLVCKID-DYVKHFNTH----N--DIKEYQAHGSKVHSVAWSCDGRRLASGSF-DKSVAIF 78 (264)
Q Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~d-~~~~~~~~~----~--~~~~~~~h~~~V~~l~~s~~g~~l~s~s~-dg~i~v~ 78 (264)
+..+..|. ..+.|.+..+ .++..+ +.++.|+.. + .+..+..+. .+..++|+|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~~~~~~~spdg~~l-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYL-YVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EECSSCCCCEEECTTSSEE-EEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEECCCCCEE-EEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 44444444 4677777654 444444 888887643 2 223444444 7899999999998887775 7889999
Q ss_pred EeccCCCC-cccEEEecccccEEeEEEecCCCCeEEEEe-CCCcEEEEECCC-CCcc-----------------------
Q psy9316 79 ALDKKGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIWDART-QKSQ----------------------- 132 (264)
Q Consensus 79 ~~~~~~~~-~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s-~dg~i~vwd~~~-~~~~----------------------- 132 (264)
++. .+.. .....+. ....+.+++|+|++. .+++++ .++.|++||+++ ++..
T Consensus 112 d~~-~~~~~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 112 RLE-DGLPVGVVDVVE-GLDGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEE-TTEEEEEEEEEC-CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ECC-CCcccccccccc-CCCCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 985 2221 1111222 334588899999664 455555 899999999976 3210
Q ss_pred --eEEEeecCCCcEEEEEeccC-CCccceEEEe----cc--ccceeeEEEcCCCCCEEEEEeCCCcEEEEeCC--CCcce
Q psy9316 133 --IMLASGSFDKSVAIFALDKK-GDLNKEVVYR----GH--TGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQ 201 (264)
Q Consensus 133 --~~~~~~~~d~~i~i~~~~~~-~~~~~~~~~~----~h--~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~--t~~~~ 201 (264)
.+++++..++.+.+|+++.. +......... ++ ...+..++|+|++..++++...++.|.+||+. ++...
T Consensus 189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~ 268 (343)
T 1ri6_A 189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS 268 (343)
T ss_dssp SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence 12345557788999998642 2221111111 11 22455799999766566677789999999998 33322
Q ss_pred eE---eecCceEEEEEcCCCCEEEEee-CCCeEEEEEcc
Q psy9316 202 II---ATKGENINITWAPNGNTIAVGN-KEDLVTFIDVV 236 (264)
Q Consensus 202 ~~---~~~~~~~~v~~sp~g~~la~gs-~d~~i~~~d~~ 236 (264)
.. .....+..++|+|+|++|++++ .++.+.+|++.
T Consensus 269 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 269 KEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 11 1223467899999999988887 68999999664
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=1.2e-15 Score=129.54 Aligned_cols=208 Identities=12% Similarity=0.167 Sum_probs=136.8
Q ss_pred EeecCceEEecccc--cc--ccccccCCCCEEEEEECCCCCeEEEEECC-CcEEEEEeccC-CCCcccEEEecccccEEe
Q psy9316 28 VCKIDDYVKHFNTH--ND--IKEYQAHGSKVHSVAWSCDGRRLASGSFD-KSVAIFALDKK-GDLNKEVVYRGHTGSVDQ 101 (264)
Q Consensus 28 ~~~~d~~~~~~~~~--~~--~~~~~~h~~~V~~l~~s~~g~~l~s~s~d-g~i~v~~~~~~-~~~~~~~~~~~h~~~v~~ 101 (264)
.+..++.++.|+.. .. ......|...+.+++|+|++++|++++.+ +.|.+|+++.. +.......+..+ ..+..
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~ 88 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTH 88 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSE
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcE
Confidence 34678888888652 11 11223577789999999999999998887 89999998732 222222223333 37788
Q ss_pred EEEecCCCCeEEEEeCCCcEEEEECCCCC---c-------------------ceEEEeecCCCcEEEEEeccCCCccceE
Q psy9316 102 LCWHATNPDLLSTASGDKTVRIWDARTQK---S-------------------QIMLASGSFDKSVAIFALDKKGDLNKEV 159 (264)
Q Consensus 102 i~~~~~~~~~l~s~s~dg~i~vwd~~~~~---~-------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~ 159 (264)
++|+|++..+++++..++.|.+||++.+. . ..++++...++.+.+|++...+......
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 99999764444444458999999993211 0 1133344478899999997644433221
Q ss_pred --EEec-cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCC--Cccee-Ee-e--c------CceEEEEEcCCCCEEEEe
Q psy9316 160 --VYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDART--QKSQI-IA-T--K------GENINITWAPNGNTIAVG 224 (264)
Q Consensus 160 --~~~~-h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t--~~~~~-~~-~--~------~~~~~v~~sp~g~~la~g 224 (264)
.... ....+..++|+|++..+++++..++.|.+||+.. ++... .. . . ..+..++|+|+|++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEE
Confidence 2222 2346778999997655666666899999999954 33211 11 1 1 134479999999988754
Q ss_pred -eCCCeEEEEEcc
Q psy9316 225 -NKEDLVTFIDVV 236 (264)
Q Consensus 225 -s~d~~i~~~d~~ 236 (264)
..++.+.+||+.
T Consensus 249 ~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 249 DRTASLITVFSVS 261 (343)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ecCCCEEEEEEEc
Confidence 479999999987
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=2.9e-15 Score=128.45 Aligned_cols=218 Identities=12% Similarity=0.140 Sum_probs=141.9
Q ss_pred EeecCCCeeEEEeec--CceEEeccccc----cccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCccc
Q psy9316 17 KLLPSGSQFHLVCKI--DDYVKHFNTHN----DIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKE 89 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~--d~~~~~~~~~~----~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~ 89 (264)
.+.|.+. +..+... ++.++.|+... .+..+..+...+..++|+|+|++|++++ .++.|.+|++...+.....
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 5566554 4333332 57787776532 3334445777889999999999999988 6789999999754443322
Q ss_pred EEEec---------ccccEEeEEEecCCCCeEEEEeCCCcEEEEECC-CCCcc-----------------------eEEE
Q psy9316 90 VVYRG---------HTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR-TQKSQ-----------------------IMLA 136 (264)
Q Consensus 90 ~~~~~---------h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~-~~~~~-----------------------~~~~ 136 (264)
..+.. +...+.+++|+|++. ++++...++.|++||++ .++.. .+++
T Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 125 DTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred ceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 22211 122477899999775 77777778999999997 32210 1344
Q ss_pred eecCCCcEEEEEeccC-CCccceEEEeccc------cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC-ccee-Eee--
Q psy9316 137 SGSFDKSVAIFALDKK-GDLNKEVVYRGHT------GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ-KSQI-IAT-- 205 (264)
Q Consensus 137 ~~~~d~~i~i~~~~~~-~~~~~~~~~~~h~------~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~-~~~~-~~~-- 205 (264)
+...++.+.+|+++.. +............ ..+..++|+|++..++++...++.|.+||+... .... ...
T Consensus 204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 4556777888887642 2222111222221 347789999976556677788999999999732 2211 111
Q ss_pred -cCceEEEEEcCCCCEEEEeeCC-CeEEEEEcc
Q psy9316 206 -KGENINITWAPNGNTIAVGNKE-DLVTFIDVV 236 (264)
Q Consensus 206 -~~~~~~v~~sp~g~~la~gs~d-~~i~~~d~~ 236 (264)
...+..++|+|+|++|++++.+ +.+.+|++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 2246789999999999888754 899999654
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=6.4e-15 Score=125.18 Aligned_cols=215 Identities=12% Similarity=0.044 Sum_probs=145.7
Q ss_pred cCCCeeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEeccc
Q psy9316 20 PSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYRGHT 96 (264)
Q Consensus 20 ~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~~h~ 96 (264)
+.+..+.+++..++.++.|+. .+....+..+...+ +++|+|+|++|++++. ++.|.+||..... . ....+..+.
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-~-~~~~~~~~~ 83 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-P-KVVAIQEGQ 83 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-C-EEEEEEECS
T ss_pred CCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-e-eEEecccCC
Confidence 344455566778899999865 34445555566667 9999999998887776 8899999986532 2 123344455
Q ss_pred ccEEeEEEecCCCCeEEEEeCCC---cEEEEECCCCCcc-------------------eEEEeecCCCc-EEEEEeccCC
Q psy9316 97 GSVDQLCWHATNPDLLSTASGDK---TVRIWDARTQKSQ-------------------IMLASGSFDKS-VAIFALDKKG 153 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~dg---~i~vwd~~~~~~~-------------------~~~~~~~~d~~-i~i~~~~~~~ 153 (264)
....+++|+|++ ++++++..++ .|.+||+++++.. .++++...++. +.+|+++..+
T Consensus 84 ~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 84 SSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 555558999966 5565555553 8999999875421 13455556677 9999987655
Q ss_pred Cccce-EEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc---eeEe-ecCceEEEEEcCCCCEEEEee-CC
Q psy9316 154 DLNKE-VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---QIIA-TKGENINITWAPNGNTIAVGN-KE 227 (264)
Q Consensus 154 ~~~~~-~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~---~~~~-~~~~~~~v~~sp~g~~la~gs-~d 227 (264)
..... ............++|+|++..+++++..++.|.+||+.+++. .... ....+..++|+|+|++|++++ .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE
T ss_pred cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC
Confidence 43221 111123345788999997655677777899999999998765 2222 234567899999999776654 57
Q ss_pred CeEEEEEcccC
Q psy9316 228 DLVTFIDVVKS 238 (264)
Q Consensus 228 ~~i~~~d~~~~ 238 (264)
+.|.+||+.++
T Consensus 243 ~~i~~~d~~~~ 253 (331)
T 3u4y_A 243 VDVFNFNQLSG 253 (331)
T ss_dssp EEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 88999998754
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.6e-15 Score=125.67 Aligned_cols=203 Identities=15% Similarity=0.163 Sum_probs=138.0
Q ss_pred ecCceEEeccccc-cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecc-cccEEeEEEecC
Q psy9316 30 KIDDYVKHFNTHN-DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH-TGSVDQLCWHAT 107 (264)
Q Consensus 30 ~~d~~~~~~~~~~-~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h-~~~v~~i~~~~~ 107 (264)
+.|+.+++|+... ....+..|.+.|.+++|+|+|++|++++ ++.|.+|++...+... .....+ ...+.+++|+|+
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE--KVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE--ECCCTTCCCBCSCCEECTT
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce--EeccccccccccceEECCC
Confidence 4577888887543 3445667889999999999999999986 7899999986512221 223344 367889999996
Q ss_pred CCCeEEEEe--CCCcEEEE--ECCCCCc------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccc
Q psy9316 108 NPDLLSTAS--GDKTVRIW--DARTQKS------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 165 (264)
Q Consensus 108 ~~~~l~s~s--~dg~i~vw--d~~~~~~------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~ 165 (264)
+ .++++++ .++..++| |+.+++. ..++.++..++.+.+|+++..+.. ...+..+.
T Consensus 96 g-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ 172 (297)
T 2ojh_A 96 G-ALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGE 172 (297)
T ss_dssp S-SEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSS
T ss_pred C-CEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCC
Confidence 5 5677777 33455555 4443321 113346677888899987654322 23345667
Q ss_pred cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCC-CcceeE--eecCceEEEEEcCCCCEEEEeeCC-----------CeEE
Q psy9316 166 GSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQII--ATKGENINITWAPNGNTIAVGNKE-----------DLVT 231 (264)
Q Consensus 166 ~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t-~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d-----------~~i~ 231 (264)
..+..+.|+|++..+++++..++.+++|++.. ...... .....+..++|+|+|++|++++.+ ..|+
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 78999999997654554555699999998763 222212 223346679999999999998876 5699
Q ss_pred EEEcccC
Q psy9316 232 FIDVVKS 238 (264)
Q Consensus 232 ~~d~~~~ 238 (264)
+||+..+
T Consensus 253 ~~d~~~~ 259 (297)
T 2ojh_A 253 LMDMDGG 259 (297)
T ss_dssp EEETTSC
T ss_pred EEecCCC
Confidence 9998754
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.68 E-value=2.1e-14 Score=131.50 Aligned_cols=207 Identities=13% Similarity=0.149 Sum_probs=140.4
Q ss_pred eeEEEeecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEe
Q psy9316 24 QFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~ 101 (264)
.+.++.+.|+.+..|+. .+.+.++..+.. +..++|+|||++|++++.|+.|.+||+.. ........+. +...+..
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~-~t~~~~~~i~-~g~~p~~ 226 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWA-KEPTKVAEIK-IGIEARS 226 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTS-SSCEEEEEEE-CCSEEEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcC-CCCcEEEEEe-cCCCcce
Confidence 55566778899998865 455667763333 89999999999999999999999999831 1112222333 3456789
Q ss_pred EEEec----CCCCeEEEEe-CCCcEEEEECCCCCcce-------------------------------EEEeecCCCcEE
Q psy9316 102 LCWHA----TNPDLLSTAS-GDKTVRIWDARTQKSQI-------------------------------MLASGSFDKSVA 145 (264)
Q Consensus 102 i~~~~----~~~~~l~s~s-~dg~i~vwd~~~~~~~~-------------------------------~~~~~~~d~~i~ 145 (264)
++|+| ++ +++++++ .++.|.+||..+.+... .+++...++.|.
T Consensus 227 va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~ 305 (543)
T 1nir_A 227 VESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL 305 (543)
T ss_dssp EEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred EEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEE
Confidence 99998 66 5666666 58999999987654211 233444567788
Q ss_pred EEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee------cCceEEEEEcCC-C
Q psy9316 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT------KGENINITWAPN-G 218 (264)
Q Consensus 146 i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~------~~~~~~v~~sp~-g 218 (264)
+|+........ . ....+...+..+.|+|++..+++++..+++|.+||..+++...... .+...++ ++|+ |
T Consensus 306 vvd~~~~~~l~-~-~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g 382 (543)
T 1nir_A 306 LVNYKDIDNLT-V-TSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYG 382 (543)
T ss_dssp EEECTTSSSCE-E-EEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTE
T ss_pred EEEecCCCcce-e-EEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCc
Confidence 88875433322 1 1123445677899999766566666779999999999987533222 1122233 4677 6
Q ss_pred CEEEEee-CCCeEEEEEccc
Q psy9316 219 NTIAVGN-KEDLVTFIDVVK 237 (264)
Q Consensus 219 ~~la~gs-~d~~i~~~d~~~ 237 (264)
..+++++ .|+.|.+||+..
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeccCCCceEEEEEeCC
Confidence 6777775 689999999876
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.67 E-value=2.3e-15 Score=133.23 Aligned_cols=209 Identities=11% Similarity=0.091 Sum_probs=143.4
Q ss_pred cCCCeeEEEeec----Cc----eEEeccc--c--ccc--cccccCCCCEEEEEECC--------------CCCeEEEEEC
Q psy9316 20 PSGSQFHLVCKI----DD----YVKHFNT--H--NDI--KEYQAHGSKVHSVAWSC--------------DGRRLASGSF 71 (264)
Q Consensus 20 ~~~~~~~~~~~~----d~----~~~~~~~--~--~~~--~~~~~h~~~V~~l~~s~--------------~g~~l~s~s~ 71 (264)
+.+..+.+++++ +| .+++|+. . +.+ +.+.+|...+..+++++ .+.+|+.++.
T Consensus 72 ~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~ 151 (415)
T 2hqs_A 72 ALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQ 151 (415)
T ss_dssp TTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEE
T ss_pred hcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEe
Confidence 445555555553 46 7888876 4 333 45778888777777664 2667777665
Q ss_pred C------CcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC---cEEEEECCCCCcce---------
Q psy9316 72 D------KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK---TVRIWDARTQKSQI--------- 133 (264)
Q Consensus 72 d------g~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg---~i~vwd~~~~~~~~--------- 133 (264)
+ +.|++||++. +. ...+..|...+.+++|+|++ +.+++++.|+ .|++||+++++...
T Consensus 152 ~~~~~~~~~i~i~d~~g-~~---~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~ 226 (415)
T 2hqs_A 152 TNGGQFPYELRVSDYDG-YN---QFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG 226 (415)
T ss_dssp CSSSSCCEEEEEEETTS-CS---CEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE
T ss_pred cCCCCccceEEEEcCCC-CC---CEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc
Confidence 4 7999999863 22 23466788999999999965 6777888775 99999998764321
Q ss_pred ----------EEEeecCCCc--EEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC-CC--cEEEEeCCCC
Q psy9316 134 ----------MLASGSFDKS--VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-DK--TVRIWDARTQ 198 (264)
Q Consensus 134 ----------~~~~~~~d~~--i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~-dg--~i~iwD~~t~ 198 (264)
++.+++.++. |.+|++.... ...+..|...+..+.|+|++ ..|+.++. ++ .|++||+.++
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCC-CEEEEEECCCCCcEEEEEECCCC
Confidence 2225555554 6666654321 23456677889999999965 55555554 45 6777799887
Q ss_pred cceeE-eecCceEEEEEcCCCCEEEEeeCC---CeEEEEEcccC
Q psy9316 199 KSQII-ATKGENINITWAPNGNTIAVGNKE---DLVTFIDVVKS 238 (264)
Q Consensus 199 ~~~~~-~~~~~~~~v~~sp~g~~la~gs~d---~~i~~~d~~~~ 238 (264)
+.... .....+.+++|+|+|++|++++.+ ..|++||+..+
T Consensus 302 ~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 302 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 64332 233457789999999999998875 58999998754
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=2.7e-14 Score=120.98 Aligned_cols=212 Identities=11% Similarity=0.067 Sum_probs=140.4
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc--cccccccc-C----CCCEEEEEECCCCCeEEEEE------------CCCcE
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQA-H----GSKVHSVAWSCDGRRLASGS------------FDKSV 75 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~-h----~~~V~~l~~s~~g~~l~s~s------------~dg~i 75 (264)
...+.|.+..+.+++..++.+..|+.. +.+..+.. + ...+.+++|+|+|++|++++ .++.|
T Consensus 38 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i 117 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV 117 (337)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceE
Confidence 346777776666666777888888653 33333432 2 22577899999999999886 57999
Q ss_pred EEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEE-------------------
Q psy9316 76 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLA------------------- 136 (264)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~------------------- 136 (264)
.+|++... .. ...+. ....+..++|+|++. +++++ ++.+++||+++++....+.
T Consensus 118 ~v~d~~~~-~~--~~~~~-~~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 190 (337)
T 1pby_B 118 ALYDAETL-SR--RKAFE-APRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN 190 (337)
T ss_dssp EEEETTTT-EE--EEEEE-CCSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCC
T ss_pred EEEECCCC-cE--EEEEe-CCCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEee
Confidence 99998542 11 12222 234577889999764 45444 6899999998764322111
Q ss_pred eecCCC-----------------------cEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEE
Q psy9316 137 SGSFDK-----------------------SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193 (264)
Q Consensus 137 ~~~~d~-----------------------~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iw 193 (264)
++..++ .+.+|+..... .. ...+..+...+..++|+|++ .+++++ ++.|.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~-~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE-MA-MREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESF 265 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC-EE-EEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEE
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCC-ce-EeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEE
Confidence 111111 24566654322 11 22344555667889999865 455555 7999999
Q ss_pred eCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 194 DARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 194 D~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
|+.+++.... .....+.+++|+|+|++|++++.++.|.+||+.++
T Consensus 266 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 266 DLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp ETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred ECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 9998765332 23445778999999999999999999999998754
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.66 E-value=4.7e-14 Score=119.76 Aligned_cols=219 Identities=6% Similarity=0.039 Sum_probs=143.9
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc--cc-ccccccCCCCEEEEEECCCCCeEEEEECCC---cEEEEEeccCCCCc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH--ND-IKEYQAHGSKVHSVAWSCDGRRLASGSFDK---SVAIFALDKKGDLN 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~-~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg---~i~v~~~~~~~~~~ 87 (264)
|...+.|.+..+...+..++.+..|+.. +. ...+..+..+..+++|+|+|++|+++..++ .|.+|++.... .
T Consensus 43 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~- 120 (331)
T 3u4y_A 43 VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-F- 120 (331)
T ss_dssp EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-E-
T ss_pred ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-e-
Confidence 3446667776555555557888888653 33 455556666666699999999999554442 89999986422 1
Q ss_pred ccEEEecccccEEeEEEecCCCCeEEEEeCCCc-EEEEECCCCCc------------------------ceEEEeecCCC
Q psy9316 88 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT-VRIWDARTQKS------------------------QIMLASGSFDK 142 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~-i~vwd~~~~~~------------------------~~~~~~~~~d~ 142 (264)
...+. ......+++|+|++..++++...++. +.+|+++.... ..+++++..++
T Consensus 121 -~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 121 -ISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp -EEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred -EEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 12233 23456899999977666777677788 99999764211 11345556678
Q ss_pred cEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--e------cC---ceEE
Q psy9316 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--T------KG---ENIN 211 (264)
Q Consensus 143 ~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~------~~---~~~~ 211 (264)
.|.+|++...........+. ....+..++|+|++..++++...++.|.+||+.+++..... . .. ....
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQ 277 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCC
T ss_pred eEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccc
Confidence 89999986543311122222 23567789999976556666667889999999987642111 1 11 1234
Q ss_pred EEEcCCCCEEEEeeC-CCeEEEEEccc
Q psy9316 212 ITWAPNGNTIAVGNK-EDLVTFIDVVK 237 (264)
Q Consensus 212 v~~sp~g~~la~gs~-d~~i~~~d~~~ 237 (264)
++|+|+|++|++++. ++.+.+||+..
T Consensus 278 ~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 278 MALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eEECCCCCEEEEecCCCCcEEEEEecC
Confidence 899999999866654 56999999875
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=2.3e-14 Score=118.60 Aligned_cols=207 Identities=14% Similarity=0.091 Sum_probs=137.2
Q ss_pred CceEeecCCCeeEEEeecCceEEeccccc---cccccccC-CCCEEEEEECCCCCeEEEEE--CCCcEEEEEeccCCCCc
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTHN---DIKEYQAH-GSKVHSVAWSCDGRRLASGS--FDKSVAIFALDKKGDLN 87 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~~~~h-~~~V~~l~~s~~g~~l~s~s--~dg~i~v~~~~~~~~~~ 87 (264)
....+.|.+..+ +++ .++.++.|+... ....+..| ...|.+++|+|++++|++++ .++...+|.++..+..
T Consensus 45 ~~~~~spdg~~l-~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~- 121 (297)
T 2ojh_A 45 EAPNWSPDGKYL-LLN-SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT- 121 (297)
T ss_dssp EEEEECTTSSEE-EEE-ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-
T ss_pred EeeEECCCCCEE-EEE-cCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-
Confidence 344677777643 333 478888886543 33444455 46789999999999999998 4467777777543322
Q ss_pred ccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECC--CCCc-------------------ceEEEeecCCCcEEE
Q psy9316 88 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKS-------------------QIMLASGSFDKSVAI 146 (264)
Q Consensus 88 ~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~--~~~~-------------------~~~~~~~~~d~~i~i 146 (264)
...+.. ...+..++|+|++..++++++.|+.+++|+++ +++. ..+++++..++.+.+
T Consensus 122 -~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 122 -PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp -CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 122322 33488899999775555588889999999853 2221 012334445788899
Q ss_pred EEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-----------CcEEEEeCCCCcceeE----eecCceEE
Q psy9316 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-----------KTVRIWDARTQKSQII----ATKGENIN 211 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-----------g~i~iwD~~t~~~~~~----~~~~~~~~ 211 (264)
|.++..+.. ...+..|...+..+.|+|++ .+|+.++.+ +.|++||+.+++.... .+...+..
T Consensus 200 ~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 276 (297)
T 2ojh_A 200 WRVRVDGSS--VERITDSAYGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNS 276 (297)
T ss_dssp EEEETTSSC--EEECCCCSEEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCS
T ss_pred EEECCCCCC--cEEEecCCcccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCccccc
Confidence 988743322 23345666788899999865 555555554 5699999998764322 22345778
Q ss_pred EEEcCCCCEEEEeeCCC
Q psy9316 212 ITWAPNGNTIAVGNKED 228 (264)
Q Consensus 212 v~~sp~g~~la~gs~d~ 228 (264)
++|+|+|++|++++.+.
T Consensus 277 ~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 277 PNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCBCTTSSEEEEEEECC
T ss_pred ceECCCCCEEEEEEecc
Confidence 99999999999888664
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=2.3e-13 Score=116.13 Aligned_cols=198 Identities=11% Similarity=0.047 Sum_probs=135.4
Q ss_pred ceEeecCCCeeEEEeecCceEEecccc--ccccccccCCCC---------EEEEEECCCCCeEEEEE--CCCcEEEEEec
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSK---------VHSVAWSCDGRRLASGS--FDKSVAIFALD 81 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~---------V~~l~~s~~g~~l~s~s--~dg~i~v~~~~ 81 (264)
...+.|.+..+.+....++.+..|+.. +.+..+..+... +.++.|+|++++++.++ .++.|.+||..
T Consensus 93 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~ 172 (353)
T 3vgz_A 93 GATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG 172 (353)
T ss_dssp SEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT
T ss_pred eEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC
Confidence 336667776655566667888888653 444555544322 78899999999888876 47889999975
Q ss_pred cCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEE
Q psy9316 82 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161 (264)
Q Consensus 82 ~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~ 161 (264)
.. .....+..+...+..+.|+|++ +.+++++.++.+.+||+.+++....+..+ .
T Consensus 173 ~~---~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~----------------------~ 226 (353)
T 3vgz_A 173 NI---KLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKILSRKKLL----------------------D 226 (353)
T ss_dssp TT---EEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECC----------------------C
T ss_pred CC---ceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcC----------------------C
Confidence 42 1222233345557888999866 56777788999999999876532211110 0
Q ss_pred eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEee-CCCeEEEEEcccC
Q psy9316 162 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGN-KEDLVTFIDVVKS 238 (264)
Q Consensus 162 ~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs-~d~~i~~~d~~~~ 238 (264)
.++...+..++|+|++..++++...++.|.+||+.+++............++|+|+|++++++. .++.|.+||+.++
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 1233456778999976656666666799999999988754333333446799999999766555 6999999998653
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=8e-14 Score=127.58 Aligned_cols=218 Identities=17% Similarity=0.234 Sum_probs=149.3
Q ss_pred EeecCCCeeEEEeecCceEEeccc--c--ccccccccCCCCEEEEEECC----CCCeEEEEEC-CCcEEEEEeccCCCCc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNT--H--NDIKEYQAHGSKVHSVAWSC----DGRRLASGSF-DKSVAIFALDKKGDLN 87 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~--~--~~~~~~~~h~~~V~~l~~s~----~g~~l~s~s~-dg~i~v~~~~~~~~~~ 87 (264)
.+.|.+. ++.+++.|+.++.|+. . +.+.++. +...+..++|+| ||++|++++. +++|.+||..... .
T Consensus 185 ~~spdg~-~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-~- 260 (543)
T 1nir_A 185 RMSASGR-YLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-P- 260 (543)
T ss_dssp EECTTSC-EEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-E-
T ss_pred EECCCCC-EEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-c-
Confidence 4556554 5567788899999877 3 3445554 455689999999 9999999884 8999999976422 1
Q ss_pred ccEEEec----------ccc-cEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEE
Q psy9316 88 KEVVYRG----------HTG-SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIML 135 (264)
Q Consensus 88 ~~~~~~~----------h~~-~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~ 135 (264)
...+.. |.. .+..+.+++++..++++...++.|.+||+.+.+. ..++
T Consensus 261 -~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 261 -KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp -EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEE
T ss_pred -ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEE
Confidence 122222 223 6888999998878888888999999999875321 1134
Q ss_pred EeecCCCcEEEEEeccCCCccceEEE--eccccceeeEEEcCCCCCEEEEEe-CCCcEEEEeCCC-------Ccc-eeEe
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNKEVVY--RGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIWDART-------QKS-QIIA 204 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~~~~~--~~h~~~i~~i~~~~~~~~~i~s~~-~dg~i~iwD~~t-------~~~-~~~~ 204 (264)
+++..++.|.+||..... +...... ..|......+ ++|+++.+++++. .|++|.+||+.+ .+. ....
T Consensus 340 va~~~~~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 340 TAANNSNKVAVIDSKDRR-LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEEGGGTEEEEEETTTTE-EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEecCCCeEEEEECCCCe-EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 566678899999976532 2111111 1254433333 4576567788876 689999999987 333 2222
Q ss_pred -ecCceEEEEEcCCCCEEEEee-------CCCeEEEEEcccCCCC
Q psy9316 205 -TKGENINITWAPNGNTIAVGN-------KEDLVTFIDVVKSLPP 241 (264)
Q Consensus 205 -~~~~~~~v~~sp~g~~la~gs-------~d~~i~~~d~~~~~~~ 241 (264)
+.+.+..++++|+|++|.+++ .++.|.+||+.+....
T Consensus 418 ~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 418 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 223467899999999999998 3779999999875544
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.62 E-value=2e-13 Score=116.20 Aligned_cols=215 Identities=10% Similarity=0.075 Sum_probs=133.6
Q ss_pred eEeecCCCeeEEEeecCceEEecccc--ccccccccCC------CCEEEEEECCCCCeEEEEECC------------CcE
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHG------SKVHSVAWSCDGRRLASGSFD------------KSV 75 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~------~~V~~l~~s~~g~~l~s~s~d------------g~i 75 (264)
..+.|.+..+.++...++.+..|+.. +.+..+..+. ..+.+++|+|+|++|++++.+ +.|
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeE
Confidence 36677776555566678888888753 3343443222 237889999999999998865 899
Q ss_pred EEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCC-------------
Q psy9316 76 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDK------------- 142 (264)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~------------- 142 (264)
.+||+...........+. +...+.+++|+|++. +++ ++ +.|++||+++++....+..+..+.
T Consensus 128 ~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWP 202 (349)
T ss_dssp EEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCC
T ss_pred EEEECCCccccceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeec
Confidence 999987532222222233 334588899999764 444 44 349999998765433222221000
Q ss_pred -----c-------E-----------------EEEEeccCCCccceEEEeccccceeeEEEcC-CCCCEEEEEeCCCcEEE
Q psy9316 143 -----S-------V-----------------AIFALDKKGDLNKEVVYRGHTGSVDQLCWHA-TNPDLLSTASGDKTVRI 192 (264)
Q Consensus 143 -----~-------i-----------------~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~-~~~~~i~s~~~dg~i~i 192 (264)
. + .++..+..........+..+...+..++|+| ++ .+++++ ++.|.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 203 HQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAK 279 (349)
T ss_dssp CCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEE
T ss_pred CCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEE
Confidence 0 0 0000111111111111222334677889998 54 555555 889999
Q ss_pred EeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 193 WDARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 193 wD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
||+++++.... .....+..++|+|+|++|++++.++.|.+||+.++
T Consensus 280 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 280 YDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred EECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 99998875332 23445678999999999988888999999998653
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.59 E-value=3.9e-13 Score=126.00 Aligned_cols=218 Identities=15% Similarity=0.140 Sum_probs=140.5
Q ss_pred ceEeecCCCeeEEEeecCceEEeccccc-------cccccccCCCC--------------EEEEEECCCCCeEEEEE---
Q psy9316 15 EYKLLPSGSQFHLVCKIDDYVKHFNTHN-------DIKEYQAHGSK--------------VHSVAWSCDGRRLASGS--- 70 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~~~~h~~~--------------V~~l~~s~~g~~l~s~s--- 70 (264)
...+.|.|..+. + ..++.+++|+... ..+....+... +.++.|+|||++|++++
T Consensus 125 ~~~~SpdG~~la-~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 125 SLDFSPVGDRVA-Y-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp TCEECTTSSEEE-E-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred CCcCCCCCCEEE-E-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 346778776543 3 4678888887543 22222333332 48899999999999988
Q ss_pred ------------------------------CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC-
Q psy9316 71 ------------------------------FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK- 119 (264)
Q Consensus 71 ------------------------------~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg- 119 (264)
.+..|.+||+... ..........|...+..++|+|++ +.+++++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~ 280 (706)
T 2z3z_A 203 SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-KTVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRA 280 (706)
T ss_dssp TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-EEEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTT
T ss_pred CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-ceEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCC
Confidence 3467889987642 211111112466779999999966 5666666665
Q ss_pred ----cEEEEECCCC-Ccc-------------------------eEEEeecCCCcEEEEEeccCCCccceEEEecccccee
Q psy9316 120 ----TVRIWDARTQ-KSQ-------------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 120 ----~i~vwd~~~~-~~~-------------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
.|++||+.++ ... ..+++++.|+.+.+|.++..+.. ...+..|...+.
T Consensus 281 ~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~--~~~l~~~~~~v~ 358 (706)
T 2z3z_A 281 QNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL--IRQVTKGEWEVT 358 (706)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE--EEECCCSSSCEE
T ss_pred CCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE--EEecCCCCeEEE
Confidence 8999999876 211 12333444566677776533321 223445666676
Q ss_pred e-EEEcCCCCCEEEEEeCCC----cEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCC----CeEEEEEcccC
Q psy9316 170 Q-LCWHATNPDLLSTASGDK----TVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKE----DLVTFIDVVKS 238 (264)
Q Consensus 170 ~-i~~~~~~~~~i~s~~~dg----~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~~~ 238 (264)
. +.|+|++..+++++..++ .|..||+.++..........+.+++|||||+++++.+.+ +.+++||+.++
T Consensus 359 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 359 NFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 6 799997665666666665 677778877664433444567889999999999877554 45999998654
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.58 E-value=1.3e-13 Score=129.87 Aligned_cols=213 Identities=10% Similarity=0.152 Sum_probs=135.5
Q ss_pred ceEeecCCCeeEEEeec-Cc-----eEEecccc--ccccccccCC------------------------CCEEEEEECCC
Q psy9316 15 EYKLLPSGSQFHLVCKI-DD-----YVKHFNTH--NDIKEYQAHG------------------------SKVHSVAWSCD 62 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~-d~-----~~~~~~~~--~~~~~~~~h~------------------------~~V~~l~~s~~ 62 (264)
..++.|.|..+ .+++. |+ .++.|+.. +....+..+. ..|.+++|+||
T Consensus 41 ~~~~SpdG~~l-a~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 41 KPKVAPDGSRV-TFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EEEECTTSSEE-EEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred CceEecCCCEE-EEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 34677777654 45555 77 78888653 3333333332 23789999999
Q ss_pred CCeEEEEECCCcEEEEEeccCC--CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcce-------
Q psy9316 63 GRRLASGSFDKSVAIFALDKKG--DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI------- 133 (264)
Q Consensus 63 g~~l~s~s~dg~i~v~~~~~~~--~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~------- 133 (264)
|++|++++. +.|.+|++.... .. ..+..|...+..++|+|++ ++++.++ ++.|++||+.+++...
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred CCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 999999886 999999987531 22 2244677889999999966 5666665 5699999987643110
Q ss_pred ----------------------------EEEeecCCC---------------------------------cEEEEEeccC
Q psy9316 134 ----------------------------MLASGSFDK---------------------------------SVAIFALDKK 152 (264)
Q Consensus 134 ----------------------------~~~~~~~d~---------------------------------~i~i~~~~~~ 152 (264)
.++.++.|+ .|.+|++...
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 122322222 3333443320
Q ss_pred CCccceEEEeccccceeeEEEcCCCCCEEEEEe-----CCCcEEEEeCCCCcceeEee-cC-----ceEEEEEcCCCCEE
Q psy9316 153 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS-----GDKTVRIWDARTQKSQIIAT-KG-----ENINITWAPNGNTI 221 (264)
Q Consensus 153 ~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~-----~dg~i~iwD~~t~~~~~~~~-~~-----~~~~v~~sp~g~~l 221 (264)
+..........|...+..++| |++ ..|+.++ .++.|++||+.+++...... .. .+..++|+|||+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EET-TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCC-CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 111111000146678899999 865 4555443 36789999999987533321 11 23478999999999
Q ss_pred EEeeCCCeEEEEEcc
Q psy9316 222 AVGNKEDLVTFIDVV 236 (264)
Q Consensus 222 a~gs~d~~i~~~d~~ 236 (264)
++++.|+.+.+|.+.
T Consensus 352 ~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 352 WSSERTGFQHLYRID 366 (741)
T ss_dssp EEECTTSSCEEEEEC
T ss_pred EEecCCCccEEEEEc
Confidence 999999988888765
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=3.6e-13 Score=115.34 Aligned_cols=186 Identities=11% Similarity=0.075 Sum_probs=122.4
Q ss_pred cCCCCEEEEEECCCCCeEEEEEC---CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEe-CCCcEEEE
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSF---DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIW 124 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~---dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s-~dg~i~vw 124 (264)
.+...+..++|+|||+ |++++. ++.|.+|++.. +.......+..+...+..++|+|++ +++++++ .++.+.+|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG-QTAHKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET-TEEEEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC-CcEEEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEE
Confidence 4556778899999999 666554 68999999853 3322222234466778899999966 5555556 78999999
Q ss_pred ECCCC-Cc------------------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccc-cceeeEE
Q psy9316 125 DARTQ-KS------------------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHT-GSVDQLC 172 (264)
Q Consensus 125 d~~~~-~~------------------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~-~~i~~i~ 172 (264)
|++.. .. ..++++...++.+.+|++...+.......+..+. .....++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 98621 10 0123444456678888887444433222222222 2567799
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCC--CcceeE-e---ec------CceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 173 WHATNPDLLSTASGDKTVRIWDART--QKSQII-A---TK------GENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 173 ~~~~~~~~i~s~~~dg~i~iwD~~t--~~~~~~-~---~~------~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
|+|++..++++...++.+.+||+.. ++.... . .. ..+..++|+|||++| ++...++.|.+||+..
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 9997655666677899999999875 332111 1 11 236679999999988 4556689999999863
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.56 E-value=8.8e-14 Score=130.53 Aligned_cols=201 Identities=9% Similarity=0.055 Sum_probs=126.5
Q ss_pred eEeecCCCeeEEEeecCceEEecccc--ccccccccCCC---CEEEEEECCCCCeEEEEECC---------CcEEEEEec
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGS---KVHSVAWSCDGRRLASGSFD---------KSVAIFALD 81 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~---~V~~l~~s~~g~~l~s~s~d---------g~i~v~~~~ 81 (264)
..+.|.|. +. ..+.|+.++.|+.. +....+..|.. .|.+++|+|||++|++++.+ +.+.+||+.
T Consensus 22 ~~~spdg~-~~-~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 22 AKWISDTE-FI-YREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CCBSSSSC-BC-CCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred cEEcCCCc-EE-EEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 34555554 32 23568889998764 33445555654 49999999999999999875 778899987
Q ss_pred cCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEE
Q psy9316 82 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161 (264)
Q Consensus 82 ~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~ 161 (264)
... .........|...+..++|+|++ +.++.++. +.|++||+.+++...+. .....+. .+
T Consensus 100 ~~~-~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~~~~-~~~~~~~----------------~~ 159 (723)
T 1xfd_A 100 HGD-PQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAIRVV-STGKEGV----------------IY 159 (723)
T ss_dssp SCC-CEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCEEEE-CCCBTTT----------------EE
T ss_pred CCc-eEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceEEEe-cCCCCCc----------------eE
Confidence 532 21111122344558889999976 55666664 79999999876543221 1100000 01
Q ss_pred eccc---------cceeeEEEcCCCCCEEEEEeCCC----------------------------------cEEEEeCCCC
Q psy9316 162 RGHT---------GSVDQLCWHATNPDLLSTASGDK----------------------------------TVRIWDARTQ 198 (264)
Q Consensus 162 ~~h~---------~~i~~i~~~~~~~~~i~s~~~dg----------------------------------~i~iwD~~t~ 198 (264)
.++. ..+..+.|+|++ ..|++++.|+ .|++||+.++
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred CcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 1111 234678898864 5555555432 7999999987
Q ss_pred cceeEee--------cCceEEEEEcCCCCEEEEeeCC----CeEEEEEcccCC
Q psy9316 199 KSQIIAT--------KGENINITWAPNGNTIAVGNKE----DLVTFIDVVKSL 239 (264)
Q Consensus 199 ~~~~~~~--------~~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~~~~ 239 (264)
+...... ...+..++|||||++|++.+.. ..|++||+.++.
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 6422211 2346789999999999777543 579999987543
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=1.7e-11 Score=105.55 Aligned_cols=217 Identities=12% Similarity=0.137 Sum_probs=133.2
Q ss_pred eEeecCCCeeEEEeecC----ceEEeccccc------cccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCC
Q psy9316 16 YKLLPSGSQFHLVCKID----DYVKHFNTHN------DIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKG 84 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d----~~~~~~~~~~------~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~ 84 (264)
..+.|.+.. +.++..+ +.+..|.... .+.....+......+++ ++++|++++ .++.|.+|++...+
T Consensus 55 l~~spdg~~-l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 55 LIPSADGKF-VYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp EEECTTSSE-EEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred EEECCCCCE-EEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC
Confidence 356666654 3444443 6777664321 22233345566778888 888888877 57899999987554
Q ss_pred CCcccEEEecc-----------cccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc-------------c--------
Q psy9316 85 DLNKEVVYRGH-----------TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-------------Q-------- 132 (264)
Q Consensus 85 ~~~~~~~~~~h-----------~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-------------~-------- 132 (264)
..........+ ...+.+++|+|++..++++...++.+.+|+++.... .
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 33221111111 223577999997654555555689999998764321 0
Q ss_pred ------------eEEEeecCCCcEEEEEeccCCCccceEEE---eccccceeeEEEcCCCCCEEEEEeC-CCcEEEEeCC
Q psy9316 133 ------------IMLASGSFDKSVAIFALDKKGDLNKEVVY---RGHTGSVDQLCWHATNPDLLSTASG-DKTVRIWDAR 196 (264)
Q Consensus 133 ------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~---~~h~~~i~~i~~~~~~~~~i~s~~~-dg~i~iwD~~ 196 (264)
.++++...++.|.+|++.. +........ ..+......++|+|++..++++... ++.|.+|++.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 1233444678889998862 222211112 1233446789999976544455555 6899999986
Q ss_pred --CCcceeE---eecCceEEEEEcCCCCEEEEee-CCCeEEEEEcc
Q psy9316 197 --TQKSQII---ATKGENINITWAPNGNTIAVGN-KEDLVTFIDVV 236 (264)
Q Consensus 197 --t~~~~~~---~~~~~~~~v~~sp~g~~la~gs-~d~~i~~~d~~ 236 (264)
++..... .....+..++|+|+|++|++++ .++.+.+|++.
T Consensus 291 ~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 291 ETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 3442221 1123567899999999998887 67899997654
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.54 E-value=2.7e-12 Score=110.53 Aligned_cols=184 Identities=15% Similarity=0.127 Sum_probs=120.6
Q ss_pred CCCCEEEEEECCCCCeEEEEECC----CcEEEEEeccC-CCCcccEEEecccccEEeEEEecCCCCeEEEEe-CCCcEEE
Q psy9316 50 HGSKVHSVAWSCDGRRLASGSFD----KSVAIFALDKK-GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS-GDKTVRI 123 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~s~s~d----g~i~v~~~~~~-~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s-~dg~i~v 123 (264)
+...+..++|+|||++|++++.+ +.|.+|+++.. +..........+......+++ ++ +++++++ .++.+.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEE
Confidence 66778889999999999999886 79999998754 322222222334455666776 34 4555555 6899999
Q ss_pred EECCCCCc----------------------------------ceEEEeecCCCcEEEEEeccCCC------ccce----E
Q psy9316 124 WDARTQKS----------------------------------QIMLASGSFDKSVAIFALDKKGD------LNKE----V 159 (264)
Q Consensus 124 wd~~~~~~----------------------------------~~~~~~~~~d~~i~i~~~~~~~~------~~~~----~ 159 (264)
|++..... ..++++...++.+.+|+++..+. +... .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99864210 01234444567888998875442 2111 1
Q ss_pred EEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-e---c---CceEEEEEcCCCCEEEEeeCC--CeE
Q psy9316 160 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-T---K---GENINITWAPNGNTIAVGNKE--DLV 230 (264)
Q Consensus 160 ~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~---~---~~~~~v~~sp~g~~la~gs~d--~~i 230 (264)
....+......++|+|++..++++...++.|.+||+.++...... . . ..+..++|+|||++|+++..+ +.+
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 122234457789999976445555447999999999876532211 1 1 224689999999999776654 899
Q ss_pred EEEEcc
Q psy9316 231 TFIDVV 236 (264)
Q Consensus 231 ~~~d~~ 236 (264)
.+|++.
T Consensus 285 ~v~~~~ 290 (361)
T 3scy_A 285 AIFKVD 290 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999985
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.51 E-value=5.6e-13 Score=122.42 Aligned_cols=209 Identities=12% Similarity=0.139 Sum_probs=135.5
Q ss_pred EeecCCCeeEEEeecCceEEecccc-ccccccccCC-CCEEEEEECCCCCeEEEEEC---CCcEEEEEecc--CCCCccc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTH-NDIKEYQAHG-SKVHSVAWSCDGRRLASGSF---DKSVAIFALDK--KGDLNKE 89 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~h~-~~V~~l~~s~~g~~l~s~s~---dg~i~v~~~~~--~~~~~~~ 89 (264)
.+.|.|..+......|+.+++|... ...+.+..|. ..+..+.|+|| +.+++++. +....+|.++. .+...
T Consensus 28 ~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-- 104 (582)
T 3o4h_A 28 QGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-- 104 (582)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE--
T ss_pred ecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc--
Confidence 3456666544334448888888753 2334455555 68999999999 77777775 55677877765 33322
Q ss_pred EEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcce----------------EEEeecCC----CcEEEEEe
Q psy9316 90 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI----------------MLASGSFD----KSVAIFAL 149 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~----------------~~~~~~~d----~~i~i~~~ 149 (264)
.+... ..+...+|+|+++.++++++.++.+.+||+++++... .++.++.+ ..|.+|++
T Consensus 105 -~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 105 -RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp -ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred -cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 12111 1233557888776655555555566699998765321 23333333 44566665
Q ss_pred ccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCC--cEEEEeCCCCcceeEe-ecCceEEEE--------EcCCC
Q psy9316 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK--TVRIWDARTQKSQIIA-TKGENINIT--------WAPNG 218 (264)
Q Consensus 150 ~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg--~i~iwD~~t~~~~~~~-~~~~~~~v~--------~sp~g 218 (264)
... .. ..+..|...+..++|+|++ ..|+++..++ .|++||+.+++..... +...+..++ |+|||
T Consensus 183 ~~g-~~---~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 183 SSG-GL---RVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp TTC-CC---EEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred CCC-Cc---eEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC
Confidence 432 22 2456777889999999965 5667888888 8999999988755211 122233455 99999
Q ss_pred CEEEEeeCCCeEEEEEc
Q psy9316 219 NTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 219 ~~la~gs~d~~i~~~d~ 235 (264)
..+++++.++.+++|++
T Consensus 258 ~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 258 RLAVVARREGRSAVFID 274 (582)
T ss_dssp CEEEEEEETTEEEEEET
T ss_pred cEEEEEEcCCcEEEEEE
Confidence 99999999999999998
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.49 E-value=1.1e-12 Score=120.56 Aligned_cols=175 Identities=15% Similarity=0.152 Sum_probs=118.3
Q ss_pred CCCEEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEeccc-ccEEeEEEecCCCCeEEEEeC---CCcEEEEE
Q psy9316 51 GSKVHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYRGHT-GSVDQLCWHATNPDLLSTASG---DKTVRIWD 125 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~~h~-~~v~~i~~~~~~~~~l~s~s~---dg~i~vwd 125 (264)
..+|.+++|+|||++|+.++. ||++++|+++. +.. ..+..|. ..+..+.|+|+ +++++++. +....+|.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-g~~---~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-GET---VKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET-TEE---EECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC-CCc---EeeecccccccccccCCCC--eEEEEeccCCCCcceEEEE
Confidence 567999999999999999887 99999999743 221 2233444 57889999985 67776665 45556654
Q ss_pred CCC----CCc------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE
Q psy9316 126 ART----QKS------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183 (264)
Q Consensus 126 ~~~----~~~------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s 183 (264)
++. ... ...++++..+ .+.+|++... .. ..+..+.. ..+.|+|+ +..|++
T Consensus 95 ~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g-~~---~~l~~~~~--~~~~~spD-G~~la~ 166 (582)
T 3o4h_A 95 VNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATED-RVALYALDGG-GL---RELARLPG--FGFVSDIR-GDLIAG 166 (582)
T ss_dssp EETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETT-EE---EEEEEESS--CEEEEEEE-TTEEEE
T ss_pred EeccCCCccccccCCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCC-cE---EEeecCCC--ceEEECCC-CCEEEE
Confidence 432 110 0123333333 3448877532 11 12222322 77889985 467776
Q ss_pred EeCC----CcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCC--eEEEEEcccCC
Q psy9316 184 ASGD----KTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKED--LVTFIDVVKSL 239 (264)
Q Consensus 184 ~~~d----g~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~--~i~~~d~~~~~ 239 (264)
++.+ +.|++||+.+++..... ..+.+..++|||||+.|+++..++ .|++||+.++.
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred EEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 6666 78999999988764332 345578899999999999888888 89999987543
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.49 E-value=2.9e-12 Score=125.54 Aligned_cols=204 Identities=9% Similarity=0.087 Sum_probs=131.3
Q ss_pred EeecCceEE-ecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEe
Q psy9316 28 VCKIDDYVK-HFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105 (264)
Q Consensus 28 ~~~~d~~~~-~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~ 105 (264)
+++.+..++ .|+.. ...+.+.+|...+..++|+|||++|++++.++.|.+||+.. +.. ......|...+..++|+
T Consensus 353 ~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~--~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKP--TVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCE--EEEEECSSSCCCCEEEC
T ss_pred EEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-Cce--EEeccCCCCCccceEEC
Confidence 333344555 55432 22334457888999999999999999999999999999864 222 23455788889999999
Q ss_pred cCCCCeEEEEeCC----------CcEEEEECCCCCcce------------------EEEeecCCCcEEEEEe--------
Q psy9316 106 ATNPDLLSTASGD----------KTVRIWDARTQKSQI------------------MLASGSFDKSVAIFAL-------- 149 (264)
Q Consensus 106 ~~~~~~l~s~s~d----------g~i~vwd~~~~~~~~------------------~~~~~~~d~~i~i~~~-------- 149 (264)
|++ +++++++.+ +.|++||+.+++... .++.++.++...+|+.
T Consensus 430 pDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~ 508 (1045)
T 1k32_A 430 DNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 508 (1045)
T ss_dssp TTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECC
T ss_pred CCC-CeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccc
Confidence 966 566666554 489999998754211 1222222222112211
Q ss_pred ----------ccCCC----------------------ccceEEEeccccceeeEEEcCCCCCEEEE-------------E
Q psy9316 150 ----------DKKGD----------------------LNKEVVYRGHTGSVDQLCWHATNPDLLST-------------A 184 (264)
Q Consensus 150 ----------~~~~~----------------------~~~~~~~~~h~~~i~~i~~~~~~~~~i~s-------------~ 184 (264)
..... ......+..|...+..+.++|++ .++++ .
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg-~~~~~~~~~g~~~~~~~~~ 587 (1045)
T 1k32_A 509 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS-ILIYSVPVHGEFAAYYQGA 587 (1045)
T ss_dssp SCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSE-EEEEECCCCCSHHHHHHCC
T ss_pred cCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCC-eEEEEecccCccccccccc
Confidence 10000 00112233455678889998854 55553 2
Q ss_pred eCCCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 185 SGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 185 ~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
...+.+.+||+.+++..... ..+..++|||||++|++++.+ .+++||+.++.
T Consensus 588 ~~~~~l~~~d~~~~~~~~l~--~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 588 PEKGVLLKYDVKTRKVTEVK--NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp CCCEEEEEEETTTCCEEEEE--EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred CCCceEEEEECCCCcEEEee--cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 23567888999988754333 456788999999999999866 78999997644
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.48 E-value=3.8e-12 Score=108.53 Aligned_cols=182 Identities=14% Similarity=0.114 Sum_probs=125.1
Q ss_pred eEeecCCCeeEEEe-ecCceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEE
Q psy9316 16 YKLLPSGSQFHLVC-KIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92 (264)
Q Consensus 16 ~~~~~~~~~~~~~~-~~d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~ 92 (264)
..+.|.+..+.+.. ..++.+..|+. .+.+..+..+...+.++.|+|++++|++++.++.|.+||..... .. ..+
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~-~~--~~~ 222 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK-IL--SRK 222 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE-EE--EEE
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe-EE--EEE
Confidence 36667776654443 23677888765 34455555466668899999999999999999999999976422 11 122
Q ss_pred e----cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccce
Q psy9316 93 R----GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSV 168 (264)
Q Consensus 93 ~----~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i 168 (264)
. ++...+..++|+|++..++++...++.|.+||+++++....+. .. .+
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~--------------------------~~-~~- 274 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA--------------------------AP-ES- 274 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE--------------------------CS-SC-
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--------------------------cC-CC-
Confidence 2 2455678899999775555555557999999997755321110 00 11
Q ss_pred eeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCC
Q psy9316 169 DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGNKED 228 (264)
Q Consensus 169 ~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~ 228 (264)
..+.|+|++..++++...++.|.+||..+.+.... .....+..++|+|+|++|+++..++
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 35788887665677776899999999998875332 3344678899999999888877664
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.46 E-value=3.7e-13 Score=126.47 Aligned_cols=198 Identities=12% Similarity=0.132 Sum_probs=125.9
Q ss_pred CCCCceEeecCCCeeEEEeecCceEEecccc--ccccccccCCC---CEEEEEECCCCCeEEEEEC---------CCcEE
Q psy9316 11 PKSPEYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGS---KVHSVAWSCDGRRLASGSF---------DKSVA 76 (264)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~---~V~~l~~s~~g~~l~s~s~---------dg~i~ 76 (264)
+.+|+.+++|.+ .+. ....|+.++.|+.. +....+.+|.. .+.+++|+|||++|+.++. ++.|.
T Consensus 16 ~~~~~~~~s~dg-~~~-~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 16 YKTFFPNWISGQ-EYL-HQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCCCCEESSSS-EEE-EECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CCCCccEECCCC-eEE-EEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 457888899988 543 34468999998753 33333434433 3889999999999999876 78999
Q ss_pred EEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCcc
Q psy9316 77 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156 (264)
Q Consensus 77 v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~ 156 (264)
+|++........ ......+..++|+|++ +.|+.+. |+.|++||+.+++...+...+. .
T Consensus 94 ~~d~~~g~~~~~----~~l~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l~~~~~-~--------------- 151 (719)
T 1z68_A 94 IYDLSNGEFVRG----NELPRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQITFNGR-E--------------- 151 (719)
T ss_dssp EEETTTTEECCS----SCCCSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCCCCB-T---------------
T ss_pred EEECCCCccccc----eecCcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEEecCCC-c---------------
Confidence 999864221000 0112458889999976 4565554 7899999998765321110000 0
Q ss_pred ceEEEeccccc---------eeeEEEcCCCCCEEEEEeCCC----------------------------------cEEEE
Q psy9316 157 KEVVYRGHTGS---------VDQLCWHATNPDLLSTASGDK----------------------------------TVRIW 193 (264)
Q Consensus 157 ~~~~~~~h~~~---------i~~i~~~~~~~~~i~s~~~dg----------------------------------~i~iw 193 (264)
...+.++... ...+.|+|++ ..|++++.|. .|++|
T Consensus 152 -~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 152 -NKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp -TTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred -CCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 0012233222 2578999864 5666666442 78899
Q ss_pred eCCCCcce--eEe--------ecCceEEEEEcCCCCEEEEeeCC----CeEEEEE
Q psy9316 194 DARTQKSQ--IIA--------TKGENINITWAPNGNTIAVGNKE----DLVTFID 234 (264)
Q Consensus 194 D~~t~~~~--~~~--------~~~~~~~v~~sp~g~~la~gs~d----~~i~~~d 234 (264)
|+.+++.. ... +...+.+++||||++.+++.... ..|.+||
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred ECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 99987641 111 22346789999998877775433 2488889
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=9.7e-12 Score=117.01 Aligned_cols=213 Identities=12% Similarity=0.112 Sum_probs=134.9
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc--cccccccCCCC----------------EEEEEECCCCCeEEEEECCC----
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN--DIKEYQAHGSK----------------VHSVAWSCDGRRLASGSFDK---- 73 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~h~~~----------------V~~l~~s~~g~~l~s~s~dg---- 73 (264)
..+.|.|..+ ++++ ++.++.|+... ..+....+... +..+.|+|||++|+.++.|+
T Consensus 157 ~~~SPDG~~l-a~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 157 AKLSPKGGFV-SFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP 234 (741)
T ss_dssp EEECTTSSEE-EEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC
T ss_pred ccCCCCCCEE-EEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc
Confidence 3677777653 3333 56777776532 22222233322 47899999999999998765
Q ss_pred -----------------------------cEEEEEeccCCCCcccEEEe-cccccEEeEEEecCCCCeEEEEe-----CC
Q psy9316 74 -----------------------------SVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHATNPDLLSTAS-----GD 118 (264)
Q Consensus 74 -----------------------------~i~v~~~~~~~~~~~~~~~~-~h~~~v~~i~~~~~~~~~l~s~s-----~d 118 (264)
.|.+||+...+.... .... .|...+..++| |++. .|+.++ .+
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~ 311 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW-IDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKK 311 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSE
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE-ecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCe
Confidence 677777653022211 1111 47778999999 9764 454443 35
Q ss_pred CcEEEEECCCCCcc-----------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeE-EEc
Q psy9316 119 KTVRIWDARTQKSQ-----------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL-CWH 174 (264)
Q Consensus 119 g~i~vwd~~~~~~~-----------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i-~~~ 174 (264)
..|++||+.+++.. .++++++.|+...||.++..+. ...+..|...+..+ .|+
T Consensus 312 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~s 388 (741)
T 2ecf_A 312 LDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAVD 388 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEEE
T ss_pred EEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEEe
Confidence 77999998765321 1345566677778888765443 23445666677776 599
Q ss_pred CCCCCEEEEEeCCC--cEEEEeCCC-Cc-ceeEeecCceEEEEEcCCCCEEEEeeCC----CeEEEEEcc
Q psy9316 175 ATNPDLLSTASGDK--TVRIWDART-QK-SQIIATKGENINITWAPNGNTIAVGNKE----DLVTFIDVV 236 (264)
Q Consensus 175 ~~~~~~i~s~~~dg--~i~iwD~~t-~~-~~~~~~~~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~ 236 (264)
|++..++++++.++ .++||++.. +. .........+..++|||||++|++...+ ..++++|..
T Consensus 389 ~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 389 EKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp TTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 87655666666666 899998764 22 2222224456789999999999877544 458888864
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.43 E-value=5.9e-12 Score=123.37 Aligned_cols=188 Identities=9% Similarity=0.069 Sum_probs=134.9
Q ss_pred CceEee-cCCCeeEEEeecCceEEeccccc-cccccccCCC-CEEEEEECCCCCeEEEEECCCcEE-EEEeccCCCCccc
Q psy9316 14 PEYKLL-PSGSQFHLVCKIDDYVKHFNTHN-DIKEYQAHGS-KVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNKE 89 (264)
Q Consensus 14 ~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~h~~-~V~~l~~s~~g~~l~s~s~dg~i~-v~~~~~~~~~~~~ 89 (264)
....+. |.|..+. ++. ++.+..++... ....+..|.+ .+..++|+ ||+.|+.++.+..+. +|++.. +..
T Consensus 299 ~~~~~S~pdG~~la-~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~~--- 371 (1045)
T 1k32_A 299 FAEDFSPLDGDLIA-FVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GKA--- 371 (1045)
T ss_dssp GEEEEEECGGGCEE-EEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CCE---
T ss_pred ceeeecCCCCCEEE-EEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CCc---
Confidence 344666 7665543 333 77777776532 3344567777 89999999 999999999887787 888653 221
Q ss_pred EEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEecccccee
Q psy9316 90 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 90 ~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
..+..|...+..++|+|++ +++++++.++.+++||+++++... ...+|...+.
T Consensus 372 ~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~~--------------------------~~~~~~~~v~ 424 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTV--------------------------IERSREAMIT 424 (1045)
T ss_dssp EECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEE--------------------------EEECSSSCCC
T ss_pred eEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceEE--------------------------eccCCCCCcc
Confidence 2233677889999999965 688889999999999998754221 1234667788
Q ss_pred eEEEcCCCCCEEEEEeCC----------CcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 170 QLCWHATNPDLLSTASGD----------KTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~d----------g~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.++|+|++ .+|++++.+ +.|++||+.+++.... .+...+..++|+|||++|++++.++....|+..
T Consensus 425 ~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 425 DFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred ceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 99999965 566666554 4999999998763222 223456789999999999999998888888754
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.42 E-value=3.9e-12 Score=119.13 Aligned_cols=212 Identities=15% Similarity=0.103 Sum_probs=123.6
Q ss_pred eEeecCCCeeEEEeecCceEEeccccc-cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccC----CCCcccE
Q psy9316 16 YKLLPSGSQFHLVCKIDDYVKHFNTHN-DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKK----GDLNKEV 90 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~----~~~~~~~ 90 (264)
..+.|. ..+. ...++.+++|+... ....+..+.+.+.+++|+|||++|+.+ .|+.|.+|++... +....
T Consensus 87 ~~~spd-~~~~--~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~-- 160 (706)
T 2z3z_A 87 TLDAGR-GLVV--LFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA-- 160 (706)
T ss_dssp EEETTT-TEEE--EEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE--
T ss_pred EEECCC-CeEE--EEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE--
Confidence 355565 4433 23578888887643 334455677788999999999999995 6899999998751 22111
Q ss_pred EEeccccc--------------EEeEEEecCCCCeEEEEeCC-CcEE---EEECCCCCcceE----EEeec--CCCcEEE
Q psy9316 91 VYRGHTGS--------------VDQLCWHATNPDLLSTASGD-KTVR---IWDARTQKSQIM----LASGS--FDKSVAI 146 (264)
Q Consensus 91 ~~~~h~~~--------------v~~i~~~~~~~~~l~s~s~d-g~i~---vwd~~~~~~~~~----~~~~~--~d~~i~i 146 (264)
....+... +.++.|+|++ ++|++++.| ..+. +.+......... -..+. .+..|.+
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 11122222 4789999966 566666522 1111 111111000000 00011 1223445
Q ss_pred EEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCC-----cEEEEeCCCC-cceeEe-e-cC----ceEEEEE
Q psy9316 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK-----TVRIWDARTQ-KSQIIA-T-KG----ENINITW 214 (264)
Q Consensus 147 ~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg-----~i~iwD~~t~-~~~~~~-~-~~----~~~~v~~ 214 (264)
|++.... .........|...+..+.|+|++ ..|++++.++ .|++||+.++ ...... . .. .+..++|
T Consensus 240 ~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 240 YHLATGK-TVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EETTTTE-EEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EECCCCc-eEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 5543211 10000112455678999999965 5666666665 9999999998 332222 1 11 1246899
Q ss_pred cC--CCCEEEEeeCCCeEEEEEcc
Q psy9316 215 AP--NGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 215 sp--~g~~la~gs~d~~i~~~d~~ 236 (264)
+| +|+++++++.|+.+.+|++.
T Consensus 318 sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 318 LPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ecCCCCEEEEEEccCCccEEEEEE
Confidence 99 99999999999999999876
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.40 E-value=5.8e-11 Score=100.26 Aligned_cols=201 Identities=10% Similarity=-0.033 Sum_probs=123.6
Q ss_pred eEEEeecCceEEecccc--ccccccccCC-C-CEEEEEECCCCCeEEE-EECCCcEEEEEeccCCCCcccEEEe-c----
Q psy9316 25 FHLVCKIDDYVKHFNTH--NDIKEYQAHG-S-KVHSVAWSCDGRRLAS-GSFDKSVAIFALDKKGDLNKEVVYR-G---- 94 (264)
Q Consensus 25 ~~~~~~~d~~~~~~~~~--~~~~~~~~h~-~-~V~~l~~s~~g~~l~s-~s~dg~i~v~~~~~~~~~~~~~~~~-~---- 94 (264)
+.+++..++.++.|+.. +.+..+.... . .+..++|+|++++++. ++.++.|.+||+... ... ..+. .
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~--~~~~~~~~~~ 79 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETL--GRIDLSTPEE 79 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-CEE--EEEECCBTTE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-CeE--eeEEcCCccc
Confidence 45667788999888753 3444444222 2 4788999999987755 455789999997642 221 1122 1
Q ss_pred ccccEEeEEEecCCCCeEEEEe------------CCCcEEEEECCCCCcceE------------------EEeecCCCcE
Q psy9316 95 HTGSVDQLCWHATNPDLLSTAS------------GDKTVRIWDARTQKSQIM------------------LASGSFDKSV 144 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s------------~dg~i~vwd~~~~~~~~~------------------~~~~~~d~~i 144 (264)
|...+..++|+|++ +++++++ .++.|.+||+.+++.... ++++ ++.+
T Consensus 80 ~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 80 RVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeE
Confidence 12356788999866 4565554 579999999987543211 1112 4566
Q ss_pred EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCC-----------------------cEEEEeCCCCcce
Q psy9316 145 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK-----------------------TVRIWDARTQKSQ 201 (264)
Q Consensus 145 ~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg-----------------------~i~iwD~~t~~~~ 201 (264)
.+|++..... ...+..+ .....+.|+|++..+++++..++ .|.+||+.+++..
T Consensus 157 ~~~d~~~~~~---~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 157 HVMDPEAGTL---VEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEEETTTTEE---EEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEEECCCCcE---eeeeecc-ccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 7777643211 1111111 12345567776544444333333 4689999887653
Q ss_pred eEe---ecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 202 IIA---TKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 202 ~~~---~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
... ....+..++|+|+|++++++ ++.|++||+..
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 211 22346789999999999888 79999999865
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.36 E-value=1.2e-10 Score=100.70 Aligned_cols=190 Identities=8% Similarity=0.086 Sum_probs=115.0
Q ss_pred cCceEEecccc---ccccccc----cCCCCEEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEe--cccccEE
Q psy9316 31 IDDYVKHFNTH---NDIKEYQ----AHGSKVHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYR--GHTGSVD 100 (264)
Q Consensus 31 ~d~~~~~~~~~---~~~~~~~----~h~~~V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~--~h~~~v~ 100 (264)
.++.+..|... +....+. .+...+.+++|+|||++|+++.. ++.|.+|+++..+.......+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 57777777542 2222222 24567999999999999988764 6799999986323322111222 2355688
Q ss_pred eEEEecCCCCeEEEEe-CCCcEEEEECCC--CCcceEEEeecCCCcEEEEEeccCCCccceEEEecccc------ceeeE
Q psy9316 101 QLCWHATNPDLLSTAS-GDKTVRIWDART--QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG------SVDQL 171 (264)
Q Consensus 101 ~i~~~~~~~~~l~s~s-~dg~i~vwd~~~--~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~------~i~~i 171 (264)
.++|+|++ +++++++ .++.+.+|+++. ++..... ..+.. +.. .+.+|.. .+..+
T Consensus 197 ~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~-----------~~~~~---~~~--~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 197 WVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTH-----------HSFPL---IPP--GIPDRDPETGKGLYRADV 259 (365)
T ss_dssp EEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEE-----------EEEES---SCT--TCCCBCTTTSSBSEEEEE
T ss_pred EeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEcc-----------ceEEc---CCC--CcCCcccccccccccccE
Confidence 99999966 4555555 478999998753 2211000 00000 000 0012222 46788
Q ss_pred E-EcCCCCCEEEEEeCCC-----cEEEEeCC-CCcceeE---e--ecCceEEEEEcC---CCCEEEEeeCC-CeEEEEEc
Q psy9316 172 C-WHATNPDLLSTASGDK-----TVRIWDAR-TQKSQII---A--TKGENINITWAP---NGNTIAVGNKE-DLVTFIDV 235 (264)
Q Consensus 172 ~-~~~~~~~~i~s~~~dg-----~i~iwD~~-t~~~~~~---~--~~~~~~~v~~sp---~g~~la~gs~d-~~i~~~d~ 235 (264)
+ |+|++..++++...++ .|.+||+. +++.... . ....+..++|+| +|++|++++.+ +.|.+|++
T Consensus 260 ~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 260 CALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred EEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 9 9997654444433333 89999996 4543221 1 122356789999 89999998764 89999998
Q ss_pred cc
Q psy9316 236 VK 237 (264)
Q Consensus 236 ~~ 237 (264)
..
T Consensus 340 ~~ 341 (365)
T 1jof_A 340 KD 341 (365)
T ss_dssp ET
T ss_pred ch
Confidence 64
No 159
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.36 E-value=4.5e-10 Score=105.28 Aligned_cols=215 Identities=10% Similarity=0.073 Sum_probs=124.4
Q ss_pred ceEeecCCCeeEEEeecC---------ceEEecccccc----ccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEec
Q psy9316 15 EYKLLPSGSQFHLVCKID---------DYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALD 81 (264)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d---------~~~~~~~~~~~----~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~ 81 (264)
...+.|.|..+ +++..+ +.+++|+.... +.....|...+..++|+|||++|+.++. +.|.+|++.
T Consensus 65 ~~~~SpDg~~l-~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 65 RYEISPDREYA-LFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp EEEECTTSSEE-EEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred eEEECCCCCEE-EEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 34566766543 344332 56667765322 2223345556889999999999999876 789999876
Q ss_pred cCCCCcccEEEeccccc------------------EEeEEEecCCCCeEEEEeCCC------------------------
Q psy9316 82 KKGDLNKEVVYRGHTGS------------------VDQLCWHATNPDLLSTASGDK------------------------ 119 (264)
Q Consensus 82 ~~~~~~~~~~~~~h~~~------------------v~~i~~~~~~~~~l~s~s~dg------------------------ 119 (264)
... .. .+...+... +..+.|+|++ +.|++++.|+
T Consensus 143 ~g~-~~--~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 143 GKQ-AI--RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp SSC-CE--EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred CCc-eE--EEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 422 21 122222222 3689999966 5666666442
Q ss_pred ----------cEEEEECCCCCcc-------------eE--EEeecCCC--------------cEEEEEeccCCCccceEE
Q psy9316 120 ----------TVRIWDARTQKSQ-------------IM--LASGSFDK--------------SVAIFALDKKGDLNKEVV 160 (264)
Q Consensus 120 ----------~i~vwd~~~~~~~-------------~~--~~~~~~d~--------------~i~i~~~~~~~~~~~~~~ 160 (264)
.+++||+.+++.. .. -+.-+.|| .|.+|++... .... ..
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~-~~ 296 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTK-KH 296 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEE-EE
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceE-EE
Confidence 7999999765421 00 01112222 3445554322 1111 11
Q ss_pred Eecccccee----eEEEcCCCCCEEEE-EeCCC------cEEEEe-CCCCc---ceeEee-cCceEE-EEEcCCCCEEEE
Q psy9316 161 YRGHTGSVD----QLCWHATNPDLLST-ASGDK------TVRIWD-ARTQK---SQIIAT-KGENIN-ITWAPNGNTIAV 223 (264)
Q Consensus 161 ~~~h~~~i~----~i~~~~~~~~~i~s-~~~dg------~i~iwD-~~t~~---~~~~~~-~~~~~~-v~~sp~g~~la~ 223 (264)
...+...+. .+.|+|++..+++. ...++ .|.+|| ..++. ...... ...+.. ++|+|||+.|++
T Consensus 297 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~ 376 (723)
T 1xfd_A 297 EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYF 376 (723)
T ss_dssp EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEE
T ss_pred EeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEE
Confidence 112223333 78999977666554 56677 577788 44444 222221 223444 689999999987
Q ss_pred eeCC---CeEEEEEccc
Q psy9316 224 GNKE---DLVTFIDVVK 237 (264)
Q Consensus 224 gs~d---~~i~~~d~~~ 237 (264)
.+.+ +.+++|++..
T Consensus 377 ~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 377 LSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EESSSCTTCCEEEEECS
T ss_pred EEcCCCCcceEEEEEeC
Confidence 7665 7889999864
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=9.2e-11 Score=99.60 Aligned_cols=149 Identities=9% Similarity=0.017 Sum_probs=92.7
Q ss_pred cCCCeeEEEeecCceEEecccc--ccccccccCC-CCEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEe-c
Q psy9316 20 PSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHG-SKVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYR-G 94 (264)
Q Consensus 20 ~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~-~~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~-~ 94 (264)
+.++.+.+++..++.++.|+.. +.++.+..+. ..+..++|+|++++++.+ ..++.|.+|++.... . ...+. .
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~-~--~~~~~~~ 84 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-N--TFHANLS 84 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE-E--EEEEESC
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc-E--EEEEEcc
Confidence 3445566677889999998753 4445554443 257889999999977654 468899999976421 1 11222 1
Q ss_pred c-----cccEEeEEEecCCCCeEEEEeCC------------CcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccc
Q psy9316 95 H-----TGSVDQLCWHATNPDLLSTASGD------------KTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 95 h-----~~~v~~i~~~~~~~~~l~s~s~d------------g~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
+ ...+..++|+|++ +++++++.+ +.|.+||+.+++....
T Consensus 85 ~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~----------------------- 140 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP----------------------- 140 (349)
T ss_dssp CSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-----------------------
T ss_pred cccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccccce-----------------------
Confidence 2 2336788999866 566666644 7888888765332110
Q ss_pred eEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc
Q psy9316 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200 (264)
Q Consensus 158 ~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~ 200 (264)
...+ .+...+..++|+|++. +++ + ++.|++||+.+++.
T Consensus 141 ~~~~-~~~~~~~~~~~s~dg~-l~~-~--~~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 141 VRTF-PMPRQVYLMRAADDGS-LYV-A--GPDIYKMDVKTGKY 178 (349)
T ss_dssp SEEE-ECCSSCCCEEECTTSC-EEE-E--SSSEEEECTTTCCE
T ss_pred eeec-cCCCcccceeECCCCc-EEE-c--cCcEEEEeCCCCce
Confidence 0011 1223577788988665 554 3 34499999887653
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.34 E-value=1.4e-10 Score=100.57 Aligned_cols=199 Identities=11% Similarity=0.105 Sum_probs=124.7
Q ss_pred CceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEEC----------CCcEEEEEeccCCCCcccEEEec-----
Q psy9316 32 DDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSF----------DKSVAIFALDKKGDLNKEVVYRG----- 94 (264)
Q Consensus 32 d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~----------dg~i~v~~~~~~~~~~~~~~~~~----- 94 (264)
|+.+..|+. .+.+.++..+..+ .++|+|||++|+++.. ++.|.+||..... .. ..+..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-~~--~~i~~~~~~~ 104 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-FE--KEISLPPKRV 104 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-EE--EEEEECTTBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-EE--EEEEcCcccc
Confidence 667777764 3445555555444 8999999999999863 5679999975422 11 11221
Q ss_pred -ccccEEeEEEecCCCCeEEEEeC--CCcEEEEECCCCCcce-------------------EEEeecCCCcEEEEEeccC
Q psy9316 95 -HTGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKSQI-------------------MLASGSFDKSVAIFALDKK 152 (264)
Q Consensus 95 -h~~~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~~~~~~~~-------------------~~~~~~~d~~i~i~~~~~~ 152 (264)
+......+.++|++ +++++++. ++.|.+||+++.+... .+++.+.|+.+.++++...
T Consensus 105 ~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred ccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 12345678899866 55655553 6899999998764321 2344556777777776442
Q ss_pred CCccc------------------------eEEEeccc---------------------------------cceeeEEEcC
Q psy9316 153 GDLNK------------------------EVVYRGHT---------------------------------GSVDQLCWHA 175 (264)
Q Consensus 153 ~~~~~------------------------~~~~~~h~---------------------------------~~i~~i~~~~ 175 (264)
+.... ...+..+. .+...+.++|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 22110 00000000 0011267777
Q ss_pred CCCCEEEEEe----------CCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 176 TNPDLLSTAS----------GDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 176 ~~~~~i~s~~----------~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
++..++++.. ..+.|.+||+.+.+.... .... +..++|+|+|++|++++. +.|.+||+.++
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 6555555543 135899999999875332 3334 889999999999988886 99999998765
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.34 E-value=3.5e-11 Score=113.75 Aligned_cols=201 Identities=15% Similarity=0.177 Sum_probs=122.2
Q ss_pred CCCceEeecCCCeeEEEeecCceEEecccc--ccccccccCCCC-----EEEEEECCCCCeEEEEECC---------CcE
Q psy9316 12 KSPEYKLLPSGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSK-----VHSVAWSCDGRRLASGSFD---------KSV 75 (264)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~-----V~~l~~s~~g~~l~s~s~d---------g~i 75 (264)
+....+++|.+ ++..+. |+.++.|+.. +....+.+|... ...+.|||||++|+.++.+ +.+
T Consensus 18 ~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 34556777777 444443 8999998753 334445555432 2447899999999998876 566
Q ss_pred EEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCc
Q psy9316 76 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL 155 (264)
Q Consensus 76 ~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~ 155 (264)
.+||+... ... .+..|...+...+|+|++. .|+.+ .|+.|++||+.+++...+...+..+
T Consensus 95 ~~~d~~~~-~~~---~l~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~-------------- 154 (740)
T 4a5s_A 95 DIYDLNKR-QLI---TEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKED-------------- 154 (740)
T ss_dssp EEEETTTT-EEC---CSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTT--------------
T ss_pred EEEECCCC-cEE---EcccCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCceEEEcCCCCcc--------------
Confidence 79998653 221 2345677899999999775 55554 4789999999875532110000000
Q ss_pred cceEEEeccc---------cceeeEEEcCCCCCEEEEEeCC------------------------------------CcE
Q psy9316 156 NKEVVYRGHT---------GSVDQLCWHATNPDLLSTASGD------------------------------------KTV 190 (264)
Q Consensus 156 ~~~~~~~~h~---------~~i~~i~~~~~~~~~i~s~~~d------------------------------------g~i 190 (264)
..+.++. .....+.|+|++ ..|+..+.| ..|
T Consensus 155 ---~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l 230 (740)
T 4a5s_A 155 ---IIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230 (740)
T ss_dssp ---TEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred ---ceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence 0111221 122346677643 444443321 158
Q ss_pred EEEeCCC---C---cceeEe-------ecCceEEEEEcCCCCEEEEeeCC----CeEEEEEcccCC
Q psy9316 191 RIWDART---Q---KSQIIA-------TKGENINITWAPNGNTIAVGNKE----DLVTFIDVVKSL 239 (264)
Q Consensus 191 ~iwD~~t---~---~~~~~~-------~~~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~~~~ 239 (264)
++||+.+ + ...... ....+.+++|||||+.++..... ..|.+||+..+.
T Consensus 231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 8899998 6 222221 22346789999999977666433 379999988754
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.33 E-value=8e-11 Score=101.90 Aligned_cols=189 Identities=11% Similarity=0.122 Sum_probs=115.6
Q ss_pred ccccccccCCCCEEE-----EEECCCCCeEEEEEC-CCc--EEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEE
Q psy9316 42 NDIKEYQAHGSKVHS-----VAWSCDGRRLASGSF-DKS--VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113 (264)
Q Consensus 42 ~~~~~~~~h~~~V~~-----l~~s~~g~~l~s~s~-dg~--i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~ 113 (264)
..+..+..|...... .+|+|||++|+.++. ++. |.+|++.. +. ...+...+...+..+.|+|++ +.|+
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~-g~--~~~lt~~~~~~~~~~~~spdg-~~l~ 96 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT-QV--ATQLTEGRGDNTFGGFLSPDD-DALF 96 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-CE--EEECCCSSCBCSSSCEECTTS-SEEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC-Cc--eEEeeeCCCCCccceEEcCCC-CEEE
Confidence 344455556555555 789999999999887 775 66666543 21 112233454455567899966 6777
Q ss_pred EEeCCCcEEEEECCCCCcceEE-----------EeecCC--------------------------------CcEEEEEec
Q psy9316 114 TASGDKTVRIWDARTQKSQIML-----------ASGSFD--------------------------------KSVAIFALD 150 (264)
Q Consensus 114 s~s~dg~i~vwd~~~~~~~~~~-----------~~~~~d--------------------------------~~i~i~~~~ 150 (264)
.++.++.+++||+.+++..... ...+.| ..|.+|++.
T Consensus 97 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 97 YVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 7888899999999886543211 001122 234444443
Q ss_pred cCCCccceEEEeccccceeeEEEcC-CCCCEEEEEeCC------CcEEEEeCCCCcceeEee-c--CceEEEEEcCCCCE
Q psy9316 151 KKGDLNKEVVYRGHTGSVDQLCWHA-TNPDLLSTASGD------KTVRIWDARTQKSQIIAT-K--GENINITWAPNGNT 220 (264)
Q Consensus 151 ~~~~~~~~~~~~~h~~~i~~i~~~~-~~~~~i~s~~~d------g~i~iwD~~t~~~~~~~~-~--~~~~~v~~sp~g~~ 220 (264)
.. . ...+..+...+..+.|+| ++ ..|+....+ ..|.++|..++....... . ..+..++|||||+.
T Consensus 177 ~g-~---~~~l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 177 TG-E---STVILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp TC-C---EEEEEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSC
T ss_pred CC-c---eEEeecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCE
Confidence 21 1 122334556788899999 54 455554543 378888887765432222 2 13567899999998
Q ss_pred EEEeeCC-----CeEEEEEcccCC
Q psy9316 221 IAVGNKE-----DLVTFIDVVKSL 239 (264)
Q Consensus 221 la~gs~d-----~~i~~~d~~~~~ 239 (264)
|+..+.+ ..|++||+..+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCC
T ss_pred EEEEecCCCCCcceEEEEecCCCc
Confidence 8665542 239999987643
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=1.4e-10 Score=100.28 Aligned_cols=183 Identities=8% Similarity=0.037 Sum_probs=113.0
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCC-eEEEEe-------------
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD-LLSTAS------------- 116 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~-~l~s~s------------- 116 (264)
...+..++|+|+|++|++++.+ .|.+|+++..+..........+ +.+.+++|+|++.. ++++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3467889999999999999888 9999998633332211111111 23556788886643 344543
Q ss_pred CCCcEEEEECCC-CCcc-----------------------eEEE-eecCCCcEEEEEeccCCCccceEEEe--cccccee
Q psy9316 117 GDKTVRIWDART-QKSQ-----------------------IMLA-SGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVD 169 (264)
Q Consensus 117 ~dg~i~vwd~~~-~~~~-----------------------~~~~-~~~~d~~i~i~~~~~~~~~~~~~~~~--~h~~~i~ 169 (264)
.+|.+.+|+++. ++.. ..++ +...++.|.+|++...+......... .|.....
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 689999999863 2210 0122 22235678888886323322211222 2345688
Q ss_pred eEEEcCCCCCEEEEEe-CCCcEEEEeCC--CCccee----E-eec------C-------ceEEEE-EcCCCCEEEEeeCC
Q psy9316 170 QLCWHATNPDLLSTAS-GDKTVRIWDAR--TQKSQI----I-ATK------G-------ENINIT-WAPNGNTIAVGNKE 227 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~-~dg~i~iwD~~--t~~~~~----~-~~~------~-------~~~~v~-~sp~g~~la~gs~d 227 (264)
.++|+|++. +++.++ .++.|.+|++. +++... . ..+ . .+..++ |+|||++|+++..+
T Consensus 197 ~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 197 WVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred EeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 899999654 444444 57899999765 444211 1 111 1 366899 99999998777643
Q ss_pred -C-----eEEEEEcc
Q psy9316 228 -D-----LVTFIDVV 236 (264)
Q Consensus 228 -~-----~i~~~d~~ 236 (264)
+ .|.+|++.
T Consensus 276 ~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 276 NKFELQGYIAGFKLR 290 (365)
T ss_dssp SSTTSCCEEEEEEEC
T ss_pred CCCCCCCeEEEEEEC
Confidence 3 89999986
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.29 E-value=1.4e-10 Score=107.73 Aligned_cols=211 Identities=11% Similarity=0.044 Sum_probs=127.5
Q ss_pred cCCCe-eEEEeecCceEEecccc----cccccccc-----CCCCEEEEEECCCCCeEEEEECC----------CcEEEEE
Q psy9316 20 PSGSQ-FHLVCKIDDYVKHFNTH----NDIKEYQA-----HGSKVHSVAWSCDGRRLASGSFD----------KSVAIFA 79 (264)
Q Consensus 20 ~~~~~-~~~~~~~d~~~~~~~~~----~~~~~~~~-----h~~~V~~l~~s~~g~~l~s~s~d----------g~i~v~~ 79 (264)
|.+.. +..+...+..++.++.. ...+.+.. |...+..++|+|||++|+.++.| ..|.+|+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 45554 33232224556666654 44555555 66788999999999999998877 5788898
Q ss_pred eccCC--CCcccEEEe-cccccEEeEEEecCCCCeEEEEeCCC--------cEEEEECC-CCCcceEEEeecCCCcEEEE
Q psy9316 80 LDKKG--DLNKEVVYR-GHTGSVDQLCWHATNPDLLSTASGDK--------TVRIWDAR-TQKSQIMLASGSFDKSVAIF 147 (264)
Q Consensus 80 ~~~~~--~~~~~~~~~-~h~~~v~~i~~~~~~~~~l~s~s~dg--------~i~vwd~~-~~~~~~~~~~~~~d~~i~i~ 147 (264)
+.... .......+. .+...+..+.|+|++ +.|+.++.++ .|++||++ ++....
T Consensus 168 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-------------- 232 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-------------- 232 (662)
T ss_dssp TTSTTTTCGGGSEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE--------------
T ss_pred CCCCccccCCceeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCcccc--------------
Confidence 76410 001112233 455678888999966 5665555442 57777776 231000
Q ss_pred EeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCC--cEEEEeCCCCcceeEe-ecCc---------eEEEEEc
Q psy9316 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK--TVRIWDARTQKSQIIA-TKGE---------NINITWA 215 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg--~i~iwD~~t~~~~~~~-~~~~---------~~~v~~s 215 (264)
.......|...+..+.|+|++. +++++..++ .|.+||+.+++..... .... +..++|+
T Consensus 233 ---------~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 233 ---------TRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp ---------EEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC
T ss_pred ---------cEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEe
Confidence 0011223456788899999765 878888888 5666677665532211 1111 3468899
Q ss_pred CCCCEEEEeeCCCeEEEEEcccCCCCCCCcccCcccceeeeeec
Q psy9316 216 PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSLW 259 (264)
Q Consensus 216 p~g~~la~gs~d~~i~~~d~~~~~~~~~~~~~~~~h~~~~~~~~ 259 (264)
|+++++++++. +.+++|.+..... +..+..+|...+.++|
T Consensus 303 ~~~~~~~~~~~-~~~~l~~~d~~~~---~~~~l~~~~~~~~~~~ 342 (662)
T 3azo_A 303 ANGLIAVVHGK-GAAVLGILDPESG---ELVDAAGPWTEWAATL 342 (662)
T ss_dssp TTSCEEEEEBS-SSCEEEEEETTTT---EEEECCSSCCEEEEEE
T ss_pred CCCEEEEEEEc-CccEEEEEECCCC---cEEEecCCCCeEEEEE
Confidence 99999999998 9999995432111 1223445555666665
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=114.49 Aligned_cols=138 Identities=15% Similarity=0.263 Sum_probs=93.3
Q ss_pred EEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccc---cEEeEEEecCCCCeEEEEeC---------CCcEEE
Q psy9316 56 SVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG---SVDQLCWHATNPDLLSTASG---------DKTVRI 123 (264)
Q Consensus 56 ~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~---~v~~i~~~~~~~~~l~s~s~---------dg~i~v 123 (264)
.++|+|+|+++++ +.|++|++|++... .. ...+..|.. .+..++|+|++ ++|+.++. |+.+++
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g-~~--~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETG-QS--YTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSC-CE--EEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCC-cE--EEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEE
Confidence 6789999965554 57999999998642 22 223444433 38899999966 56666655 688999
Q ss_pred EECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE
Q psy9316 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII 203 (264)
Q Consensus 124 wd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~ 203 (264)
||+++++... . . .....+..++|+|++ ..|+.+. ++.|++||+.+++....
T Consensus 95 ~d~~~g~~~~------------------~---~------~l~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 95 YDLSNGEFVR------------------G---N------ELPRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp EETTTTEECC------------------S---S------CCCSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred EECCCCcccc------------------c---e------ecCcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEEE
Confidence 9987654200 0 0 001357789999965 4556554 88999999988765322
Q ss_pred eecC---ce-----------------EEEEEcCCCCEEEEeeCC
Q psy9316 204 ATKG---EN-----------------INITWAPNGNTIAVGNKE 227 (264)
Q Consensus 204 ~~~~---~~-----------------~~v~~sp~g~~la~gs~d 227 (264)
...+ .+ .+++|||||++|++++.|
T Consensus 146 ~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 146 TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 2111 11 379999999999999866
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.26 E-value=6.5e-09 Score=88.62 Aligned_cols=199 Identities=7% Similarity=0.021 Sum_probs=126.9
Q ss_pred eEEeccc--cccccccc-cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEE---------ecccccEEe
Q psy9316 34 YVKHFNT--HNDIKEYQ-AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY---------RGHTGSVDQ 101 (264)
Q Consensus 34 ~~~~~~~--~~~~~~~~-~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~---------~~h~~~v~~ 101 (264)
.+..++. .+.++.+. ++-.....++++|+|+.+++...++.|.+|+.+. .......+ ..+-.....
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHS--KEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTC--SSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCC--CeEEEEEecccCCCCCCccccCCCcE
Confidence 4666654 33333332 3345789999999999888888889999998642 21111222 234446889
Q ss_pred EEEecCCCCeEEEEe-CCCcEEEEECCCCCc-----------------------------ceEEEeecCCCcEEEEEecc
Q psy9316 102 LCWHATNPDLLSTAS-GDKTVRIWDARTQKS-----------------------------QIMLASGSFDKSVAIFALDK 151 (264)
Q Consensus 102 i~~~~~~~~~l~s~s-~dg~i~vwd~~~~~~-----------------------------~~~~~~~~~d~~i~i~~~~~ 151 (264)
++++|.+++++++.+ .++.|++||.+.... ..++++...++.|.+|+...
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 999986667777776 699999999543210 11233444455666776542
Q ss_pred CCCccceEEEeccccceeeEEEcCCCCCEEEEE-------eCCCcEEEEeCCCCcceeEe-----ecCceEEEEEcCCCC
Q psy9316 152 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA-------SGDKTVRIWDARTQKSQIIA-----TKGENINITWAPNGN 219 (264)
Q Consensus 152 ~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~-------~~dg~i~iwD~~t~~~~~~~-----~~~~~~~v~~sp~g~ 219 (264)
+..........+...+..++++| +.++++. ..+..|++||..+++..... ....+..++++|+|+
T Consensus 228 -G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 228 -KEFVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp -CCEEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred -CcEEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC
Confidence 22222111123445677888887 2233332 23458999999888753332 223478899999998
Q ss_pred EEEEeeCCCeEEEEEccc
Q psy9316 220 TIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 220 ~la~gs~d~~i~~~d~~~ 237 (264)
.+++...++.|++|++..
T Consensus 305 lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEESSSCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 889999999999999864
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.26 E-value=5.7e-10 Score=96.49 Aligned_cols=215 Identities=13% Similarity=0.110 Sum_probs=119.6
Q ss_pred EeecCCCeeEEEeecCce--EEeccc--cccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEE
Q psy9316 17 KLLPSGSQFHLVCKIDDY--VKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~--~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~ 92 (264)
.+.|.|..+......++. +..++. .+......++...+..+.|+|||++|+.++.++.|.+|++... .. ..++
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g-~~--~~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL-EE--NVVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC-CE--EEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC-cc--eeee
Confidence 466667655444433663 555543 3333344455555556789999999999999999999998652 21 2234
Q ss_pred ecccccEEeEEE--ecCCCCeEEE----------------------EeCCCcEEEEECCCCCcceEE--------EeecC
Q psy9316 93 RGHTGSVDQLCW--HATNPDLLST----------------------ASGDKTVRIWDARTQKSQIML--------ASGSF 140 (264)
Q Consensus 93 ~~h~~~v~~i~~--~~~~~~~l~s----------------------~s~dg~i~vwd~~~~~~~~~~--------~~~~~ 140 (264)
..+...+....| ++++ .+++. ...+..|.+||+.+++...+. ..-+.
T Consensus 119 ~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred echhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 445444444444 5544 45542 224577999999876532211 01111
Q ss_pred -CCc--------------EEEEEeccCCCccceEEEeccc--cceeeEEEcCCCCCEEEEEeCCC----cEEEEeCCCCc
Q psy9316 141 -DKS--------------VAIFALDKKGDLNKEVVYRGHT--GSVDQLCWHATNPDLLSTASGDK----TVRIWDARTQK 199 (264)
Q Consensus 141 -d~~--------------i~i~~~~~~~~~~~~~~~~~h~--~~i~~i~~~~~~~~~i~s~~~dg----~i~iwD~~t~~ 199 (264)
|+. ..||.++..+.. ...+..+. ..+....|+|++..++.....++ .|++||+.+++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 222 122222221111 11122233 24777899997765544333322 39999999987
Q ss_pred ceeEe-ecCc------eEEEEEcCCCCEEEEe---------eCCCeEEEEEccc
Q psy9316 200 SQIIA-TKGE------NINITWAPNGNTIAVG---------NKEDLVTFIDVVK 237 (264)
Q Consensus 200 ~~~~~-~~~~------~~~v~~sp~g~~la~g---------s~d~~i~~~d~~~ 237 (264)
..... .... ...++|+|||+.|++. ..+..|++||+..
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 276 NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 53322 2221 1124799999988865 4566899999875
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.24 E-value=1.1e-08 Score=84.79 Aligned_cols=203 Identities=11% Similarity=0.140 Sum_probs=126.7
Q ss_pred eeEEEeecCceEEecccc-ccccccc------cCCCCEEEEEE-CCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEe-
Q psy9316 24 QFHLVCKIDDYVKHFNTH-NDIKEYQ------AHGSKVHSVAW-SCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYR- 93 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~~-~~~~~~~------~h~~~V~~l~~-s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~- 93 (264)
.+.++...++.+..|+.. +.+..+. +|...+..+++ .++++.+++... ++.|.+|+.+ +... ..+.
T Consensus 42 ~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~--g~~~--~~~~~ 117 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY--GQFV--RKFGA 117 (286)
T ss_dssp CEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT--SCEE--EEECT
T ss_pred CEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC--CcEE--EEecC
Confidence 444455667778887653 3333332 24457899999 467766666533 7899999732 3221 1222
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc--------------------ceEEEeecCCCcEEEEEeccCC
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--------------------QIMLASGSFDKSVAIFALDKKG 153 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~--------------------~~~~~~~~~d~~i~i~~~~~~~ 153 (264)
.+...+.++++++++ +++++...++.|.+||.+.... ..++++...++.|.+|+.. +
T Consensus 118 ~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g 194 (286)
T 1q7f_A 118 TILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--G 194 (286)
T ss_dssp TTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--C
T ss_pred ccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--C
Confidence 234568899998855 6777767789999999653211 0123344445666677642 2
Q ss_pred CccceEEEe--ccccceeeEEEcCCCCCEEEEEeCCC-cEEEEeCCCCcceeEeec---CceEEEEEcCCCCEEEEeeCC
Q psy9316 154 DLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDK-TVRIWDARTQKSQIIATK---GENINITWAPNGNTIAVGNKE 227 (264)
Q Consensus 154 ~~~~~~~~~--~h~~~i~~i~~~~~~~~~i~s~~~dg-~i~iwD~~t~~~~~~~~~---~~~~~v~~sp~g~~la~gs~d 227 (264)
... ..+. ++......+++++++ .++++...++ .|.+||............ ..+..++++|+|+.+++ +.|
T Consensus 195 ~~~--~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~ 270 (286)
T 1q7f_A 195 QYL--RQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKD 270 (286)
T ss_dssp CEE--EEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT
T ss_pred CEE--EEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCC
Confidence 211 1222 223567889998854 6777777775 999999765433222222 23668999999987776 679
Q ss_pred CeEEEEEccc
Q psy9316 228 DLVTFIDVVK 237 (264)
Q Consensus 228 ~~i~~~d~~~ 237 (264)
+.|++|+...
T Consensus 271 ~~v~v~~~~~ 280 (286)
T 1q7f_A 271 YRLYIYRYVQ 280 (286)
T ss_dssp TEEEEEECSC
T ss_pred CeEEEEEccc
Confidence 9999999754
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.23 E-value=6.6e-09 Score=86.86 Aligned_cols=213 Identities=13% Similarity=0.153 Sum_probs=132.1
Q ss_pred EeecCCCeeEEEeecCceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE-Eec-
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-YRG- 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~-~~~- 94 (264)
.+.|.+..+..+...++.+..|+.....+.+..+...+.+++++|+|+++++...++.|.+|+... +....... ...
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG-GEWESIADSFEGK 112 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT-CCEEEEECEETTE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC-CcEEEEeeccCCC
Confidence 455666545556667778888876544667777888899999999999887776678899998643 32211100 011
Q ss_pred ccccEEeEEEecCCCCeEEE----Ee-------------CCCcEEEEECCCCCc------------------ceEEEeec
Q psy9316 95 HTGSVDQLCWHATNPDLLST----AS-------------GDKTVRIWDARTQKS------------------QIMLASGS 139 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s----~s-------------~dg~i~vwd~~~~~~------------------~~~~~~~~ 139 (264)
....+.+++++|++ +++++ |+ ..+.|..+|.. ++. ...+++..
T Consensus 113 ~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~ 190 (296)
T 3e5z_A 113 KLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDT 190 (296)
T ss_dssp ECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEET
T ss_pred CCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeC
Confidence 12345678898855 56665 22 13456666654 221 01235556
Q ss_pred CCCcEEEEEeccCCCc-cceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEEE-cCC
Q psy9316 140 FDKSVAIFALDKKGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITW-APN 217 (264)
Q Consensus 140 ~d~~i~i~~~~~~~~~-~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~-sp~ 217 (264)
.++.|.+|++...+.+ .....+..+......+++.+++ .++++. ++.|.+||...+..........+.+++| +|+
T Consensus 191 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~d 267 (296)
T 3e5z_A 191 GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVLTPDGDELGRVLTPQTTSNLCFGGPE 267 (296)
T ss_dssp TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEECTTSCEEEEEECSSCCCEEEEESTT
T ss_pred CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEECCCCCEEEEEECCCCceeEEEECCC
Confidence 6677888887644443 2222233344456788998865 566554 8899999997543333333333778999 689
Q ss_pred CCEEEEeeCCCeEEEEEcc
Q psy9316 218 GNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 218 g~~la~gs~d~~i~~~d~~ 236 (264)
++.|.+++.+++ .-++..
T Consensus 268 ~~~L~v~t~~~l-~~~~~~ 285 (296)
T 3e5z_A 268 GRTLYMTVSTEF-WSIETN 285 (296)
T ss_dssp SCEEEEEETTEE-EEEECS
T ss_pred CCEEEEEcCCeE-EEEEcc
Confidence 999999887644 444543
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.20 E-value=2.5e-09 Score=93.40 Aligned_cols=147 Identities=13% Similarity=0.022 Sum_probs=105.5
Q ss_pred CEEEEEECCCCCeEEEEECCCcEEEEEeccCC--------CCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKG--------DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~--------~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
.++.|++++...++++|+.++ +.+|+++... ........ .+.+ |+.++| ++.+|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 689999999999999999885 5569865311 11111222 3566 999999 44677776 88999999
Q ss_pred ECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe
Q psy9316 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA 204 (264)
Q Consensus 125 d~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~ 204 (264)
|+++..... ....|..++..+.+.+.+ ++.+..||.+.+||+.+.....
T Consensus 112 dv~sl~~~~--------------------------~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 112 DLEELSEFR--------------------------TVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp ESSSTTCEE--------------------------EEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE--
T ss_pred EchhhhccC--------------------------ccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc--
Confidence 998644211 112344556666666432 7778999999999999776432
Q ss_pred ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 205 TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 205 ~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
....+.+++|||+| +++|..||.+++|+.....
T Consensus 161 ~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 161 LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp EEESEEEEEECSSE--EEEEETTSCEEEEEEETTE
T ss_pred ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcc
Confidence 33468899999999 7889999999999876433
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.18 E-value=4e-10 Score=106.56 Aligned_cols=201 Identities=13% Similarity=0.204 Sum_probs=116.3
Q ss_pred ceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCccc-------EEEeccc--------
Q psy9316 33 DYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE-------VVYRGHT-------- 96 (264)
Q Consensus 33 ~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~-------~~~~~h~-------- 96 (264)
+.+.+|+.. ..++.+..|.+.+...+|||||++|+.+ .|+.|.+|++.... .... .++.++.
T Consensus 92 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~-~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP-SYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC-CEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc-eEEEcCCCCccceecCcccccccchh
Confidence 344566553 2344566778889999999999999988 46899999875422 1110 0122222
Q ss_pred -ccEEeEEEecCCCCeEEEEeC-CCcEEEEECCCCCc-----c--eEE---EeecCCC--cEEEEEecc---CCCccceE
Q psy9316 97 -GSVDQLCWHATNPDLLSTASG-DKTVRIWDARTQKS-----Q--IML---ASGSFDK--SVAIFALDK---KGDLNKEV 159 (264)
Q Consensus 97 -~~v~~i~~~~~~~~~l~s~s~-dg~i~vwd~~~~~~-----~--~~~---~~~~~d~--~i~i~~~~~---~~~~~~~~ 159 (264)
+....+.|+|++ +.|+.++. +..+++|++..... . ..+ ..|..+. .+.+|++.. .... ...
T Consensus 170 ~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~-~~~ 247 (740)
T 4a5s_A 170 FSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA-TSI 247 (740)
T ss_dssp SSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC-CEE
T ss_pred cCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc-eEE
Confidence 112348899976 45555554 55588887632110 0 011 1233333 355676654 3211 111
Q ss_pred EEe------ccccceeeEEEcCCCCCEEEEEe----CCCcEEEEeCCCCc-------ce-e--EeecCce-----EEEEE
Q psy9316 160 VYR------GHTGSVDQLCWHATNPDLLSTAS----GDKTVRIWDARTQK-------SQ-I--IATKGEN-----INITW 214 (264)
Q Consensus 160 ~~~------~h~~~i~~i~~~~~~~~~i~s~~----~dg~i~iwD~~t~~-------~~-~--~~~~~~~-----~~v~~ 214 (264)
.+. +|...+..+.|+|++ .+++... .+..|++||+.+++ .. + ..+...+ ..++|
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred EecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 222 366778999999975 4444332 23479999999876 11 1 1122222 36889
Q ss_pred cCCCCEEE-EeeC-CC--eEEEEEcccC
Q psy9316 215 APNGNTIA-VGNK-ED--LVTFIDVVKS 238 (264)
Q Consensus 215 sp~g~~la-~gs~-d~--~i~~~d~~~~ 238 (264)
+|||+.++ ..+. +| .|++||+..+
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 99999887 6653 33 4888887643
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.13 E-value=1.9e-09 Score=93.12 Aligned_cols=214 Identities=9% Similarity=0.059 Sum_probs=114.6
Q ss_pred eEeecCCCeeEEEeecCc--eEEeccccc-cccccccCCCC-EEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE
Q psy9316 16 YKLLPSGSQFHLVCKIDD--YVKHFNTHN-DIKEYQAHGSK-VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV 91 (264)
Q Consensus 16 ~~~~~~~~~~~~~~~~d~--~~~~~~~~~-~~~~~~~h~~~-V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~ 91 (264)
..+.|.|..+......++ .+..++... ....+..+... ...+.|+|||++|+.++.++.|.+|++.. +... .+
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-~~~~--~~ 117 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET-LEEQ--VI 117 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-CCEE--EE
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-CCcE--EE
Confidence 356666765444433333 455544322 22233333333 33478999999999999999999998764 2211 22
Q ss_pred EecccccEEe-------------------EEEecCCCCeEEEE-----eCCCcEEEEECCCCCcceE-------------
Q psy9316 92 YRGHTGSVDQ-------------------LCWHATNPDLLSTA-----SGDKTVRIWDARTQKSQIM------------- 134 (264)
Q Consensus 92 ~~~h~~~v~~-------------------i~~~~~~~~~l~s~-----s~dg~i~vwd~~~~~~~~~------------- 134 (264)
...+...... +.|+|++. .++.. ..+..|++||+.+++....
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 2223222211 23455432 22222 4567889999877543211
Q ss_pred ------EEeecCC------CcEEEEEeccCCCccceEEEecc--ccceeeEEEcCCCCCEEEEEeCC----CcEEEEeCC
Q psy9316 135 ------LASGSFD------KSVAIFALDKKGDLNKEVVYRGH--TGSVDQLCWHATNPDLLSTASGD----KTVRIWDAR 196 (264)
Q Consensus 135 ------~~~~~~d------~~i~i~~~~~~~~~~~~~~~~~h--~~~i~~i~~~~~~~~~i~s~~~d----g~i~iwD~~ 196 (264)
++..+.+ ..|.++++... .. ..+..+ ...+..+.|+|++..+++....+ +.|++||+.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NV---RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSC-CC---EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCC-ce---eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 1111111 12333333211 11 111122 12477789999765554443322 449999999
Q ss_pred CCcceeEeecCceEEEEEcC-CCCEEEEee----------------CCCeEEEEEcccC
Q psy9316 197 TQKSQIIATKGENINITWAP-NGNTIAVGN----------------KEDLVTFIDVVKS 238 (264)
Q Consensus 197 t~~~~~~~~~~~~~~v~~sp-~g~~la~gs----------------~d~~i~~~d~~~~ 238 (264)
+++........... +.|+| +|+++++++ .+..|++||+..+
T Consensus 273 ~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 273 TLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp TCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred CCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 87653332222222 89999 999888765 3478999998654
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.12 E-value=8.8e-09 Score=85.48 Aligned_cols=181 Identities=12% Similarity=0.185 Sum_probs=115.9
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe------cccccEEeEEEecCCCCeEEEEeC-CCcE
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR------GHTGSVDQLCWHATNPDLLSTASG-DKTV 121 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~------~h~~~v~~i~~~~~~~~~l~s~s~-dg~i 121 (264)
++-..+.+++++++++++++...++.|.+|+.+ +... ..+. .+...+..+++.+.+++++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE--GRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT--SCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC--CcEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 455678999999999988888889999999854 2211 1121 244567888885445455555433 8899
Q ss_pred EEEECCCCCc-------------------ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEE
Q psy9316 122 RIWDARTQKS-------------------QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182 (264)
Q Consensus 122 ~vwd~~~~~~-------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~ 182 (264)
++||.+.... ..++++...++.|.+|+. .+..........+......++++|+ +.+++
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v 179 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ--NGNVLHKFGCSKHLEFPNGVVVNDK-QEIFI 179 (286)
T ss_dssp EEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT--TSCEEEEEECTTTCSSEEEEEECSS-SEEEE
T ss_pred EEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC--CCCEEEEeCCCCccCCcEEEEECCC-CCEEE
Confidence 9998543210 012333334455666653 2222111111134456788999885 45777
Q ss_pred EEeCCCcEEEEeCCCCcceeEeec---CceEEEEEcCCCCEEEEeeCCC-eEEEEEcc
Q psy9316 183 TASGDKTVRIWDARTQKSQIIATK---GENINITWAPNGNTIAVGNKED-LVTFIDVV 236 (264)
Q Consensus 183 s~~~dg~i~iwD~~t~~~~~~~~~---~~~~~v~~sp~g~~la~gs~d~-~i~~~d~~ 236 (264)
+...++.|++||............ ..+..++++|+|+++++...++ .|.+||..
T Consensus 180 ~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 777899999999865433222222 3577899999999988888786 99999954
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.12 E-value=5e-09 Score=91.49 Aligned_cols=135 Identities=14% Similarity=0.103 Sum_probs=100.3
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~ 128 (264)
.+.+ |..|+| |+++|+++ .++.|++||+..... ......|...+.++.+.+. + +++++.||.+.+||++.
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~---~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSE---FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRT 155 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC---EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTT
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc---cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccC
Confidence 4566 999999 99999998 889999999875332 2234566777887776542 2 77789999999999975
Q ss_pred CCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc--eeEe--
Q psy9316 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIA-- 204 (264)
Q Consensus 129 ~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~--~~~~-- 204 (264)
+... .+...|.+++|+|.+ ++.|..||.+++|+...++. +...
T Consensus 156 ~~~~------------------------------~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~ 202 (388)
T 1xip_A 156 KSTK------------------------------QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSL 202 (388)
T ss_dssp CCEE------------------------------EEEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred Cccc------------------------------cccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecC
Confidence 4321 123479999999965 56789999999999988763 2211
Q ss_pred ---------ecCceEEEEEcCCCCEEEEeeC
Q psy9316 205 ---------TKGENINITWAPNGNTIAVGNK 226 (264)
Q Consensus 205 ---------~~~~~~~v~~sp~g~~la~gs~ 226 (264)
+...+.+|.|.+++.++++-..
T Consensus 203 Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 203 PSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp CHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred CcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 2345889999999999987543
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.10 E-value=2.8e-09 Score=92.02 Aligned_cols=176 Identities=10% Similarity=0.099 Sum_probs=105.9
Q ss_pred EEEEEECCCCCeEEEEECC-C--cEEEEEeccCCCCcccEEEecccccE-EeEEEecCCCCeEEEEeCCCcEEEEECCCC
Q psy9316 54 VHSVAWSCDGRRLASGSFD-K--SVAIFALDKKGDLNKEVVYRGHTGSV-DQLCWHATNPDLLSTASGDKTVRIWDARTQ 129 (264)
Q Consensus 54 V~~l~~s~~g~~l~s~s~d-g--~i~v~~~~~~~~~~~~~~~~~h~~~v-~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~ 129 (264)
+..++|+|||++|+.+..+ + .|.+|++.. +.. ..+..+.... ..+.|+|++ +.|+.++.++.+++||+.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-~~~---~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-QQA---VQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-TEE---EECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC-CcE---EEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCC
Confidence 6778899999998877543 3 566666543 211 1122222232 236799865 67777888889999999876
Q ss_pred CcceEEE-------------ee------------------------------cCCCcEEEEEeccCCCccceEEEecccc
Q psy9316 130 KSQIMLA-------------SG------------------------------SFDKSVAIFALDKKGDLNKEVVYRGHTG 166 (264)
Q Consensus 130 ~~~~~~~-------------~~------------------------------~~d~~i~i~~~~~~~~~~~~~~~~~h~~ 166 (264)
+...+.. .. ..+..|.+|++... .. .....+..
T Consensus 113 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g-~~---~~~~~~~~ 188 (396)
T 3c5m_A 113 EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETG-EL---EVIHQDTA 188 (396)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTC-CE---EEEEEESS
T ss_pred CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCC-cE---EeeccCCc
Confidence 5322111 00 12223455554321 11 12224556
Q ss_pred ceeeEEEcCCCCCEEEEEeCC------CcEEEEeCCCCcceeEeec--C-ceEEEEEcCCCCEEEEeeCC-----CeEEE
Q psy9316 167 SVDQLCWHATNPDLLSTASGD------KTVRIWDARTQKSQIIATK--G-ENINITWAPNGNTIAVGNKE-----DLVTF 232 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~d------g~i~iwD~~t~~~~~~~~~--~-~~~~v~~sp~g~~la~gs~d-----~~i~~ 232 (264)
.+..+.|+|.++..|+..+.+ ..|.+||+.++........ . .+..++|+|+|++|+.++.+ +.|++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 788899998434444444433 4688999877653222221 2 35678999999988877654 45999
Q ss_pred EEcccC
Q psy9316 233 IDVVKS 238 (264)
Q Consensus 233 ~d~~~~ 238 (264)
||+..+
T Consensus 269 ~d~~~g 274 (396)
T 3c5m_A 269 ANPETL 274 (396)
T ss_dssp ECTTTC
T ss_pred EECCCC
Confidence 998654
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.07 E-value=5.3e-08 Score=81.27 Aligned_cols=182 Identities=11% Similarity=0.068 Sum_probs=118.7
Q ss_pred cccccccCCCCEEEEEECCCCC-eEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g~-~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
.++.+..+.....++.|+|+++ .++++..++.|..|+.... ...+..+...+.++++++++ +++++...++.|
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTC-CEEEEETTTTEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCC-cEEEEecCCCeE
Confidence 3444555566788999999998 6777778899999987532 23355567778999999855 566666667899
Q ss_pred EEEECCCCCcceEE-------------EeecCCCcEE-------------------------EEEeccCCCccceEEEec
Q psy9316 122 RIWDARTQKSQIML-------------ASGSFDKSVA-------------------------IFALDKKGDLNKEVVYRG 163 (264)
Q Consensus 122 ~vwd~~~~~~~~~~-------------~~~~~d~~i~-------------------------i~~~~~~~~~~~~~~~~~ 163 (264)
.+||.++++...+. +..+.+|.+. ||.++..+. ......
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~---~~~~~~ 169 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT---LSAPIR 169 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC---EEEEEC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC---EEEeec
Confidence 99998665432110 1112334332 333333222 122334
Q ss_pred cccceeeEEEcCCCCCEEEEEeCCCcEEEEeCC-CCcc---eeEe--ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR-TQKS---QIIA--TKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 164 h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~-t~~~---~~~~--~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+....+.++|+|++. .+++.+.++.|.+||+. ++.. .... ..+.+..++++++|+++++. ++.|.+||..
T Consensus 170 ~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 445668899998654 44788888999999987 3332 1111 12345679999999977666 8889999975
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.05 E-value=3.5e-08 Score=83.55 Aligned_cols=176 Identities=10% Similarity=0.113 Sum_probs=113.9
Q ss_pred CceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCe
Q psy9316 32 DDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 111 (264)
Q Consensus 32 d~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~ 111 (264)
++.++.| ..+....+..+...+.+++|+++|++++++..++.|.+|+... +... .....+...+.++++++++ ++
T Consensus 26 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~~~~--~~~~~~~~~~~~i~~~~dg-~l 100 (333)
T 2dg1_A 26 ESELQTI-TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-KEIK--RPFVSHKANPAAIKIHKDG-RL 100 (333)
T ss_dssp GGGSCEE-ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEE--EEEECSSSSEEEEEECTTS-CE
T ss_pred cccCccc-ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-CcEE--EEeeCCCCCcceEEECCCC-cE
Confidence 4455555 3344455666777789999999999877888889999998653 2221 1122456779999999865 56
Q ss_pred EEEEeCC----CcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC-
Q psy9316 112 LSTASGD----KTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG- 186 (264)
Q Consensus 112 l~s~s~d----g~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~- 186 (264)
+++...+ +.|.+||.+++.....+ .. ..+...+..+.++|++ .++++...
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~-~~-----------------------~~~~~~~~~i~~d~~g-~l~v~~~~~ 155 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDII-ED-----------------------LSTAYCIDDMVFDSKG-GFYFTDFRG 155 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEE-CS-----------------------SSSCCCEEEEEECTTS-CEEEEECCC
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEE-cc-----------------------CccCCcccceEECCCC-CEEEEeccc
Confidence 6655555 68889998765432111 00 0122357788898854 56665443
Q ss_pred -----CCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEE-EeeCCCeEEEEEccc
Q psy9316 187 -----DKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIA-VGNKEDLVTFIDVVK 237 (264)
Q Consensus 187 -----dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la-~gs~d~~i~~~d~~~ 237 (264)
.+.|..+|..+++.... .....+..++|+|+|+.|. +.+.++.|++||+.+
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 35677777766543222 2234567899999998664 445678999999863
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.05 E-value=9e-08 Score=78.37 Aligned_cols=200 Identities=10% Similarity=0.042 Sum_probs=122.2
Q ss_pred ecCceEEeccccccccc-c-ccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe-cccccEEeEEEec
Q psy9316 30 KIDDYVKHFNTHNDIKE-Y-QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHA 106 (264)
Q Consensus 30 ~~d~~~~~~~~~~~~~~-~-~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~-~h~~~v~~i~~~~ 106 (264)
..++.+..++....... + ..+...+.+++++++|+.+++.. ++.|.+|+.+.. .. ..+. .....+.++++++
T Consensus 43 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~--~~--~~~~~~~~~~p~~i~~~~ 117 (270)
T 1rwi_B 43 GMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN--NQ--TVLPFDGLNYPEGLAVDT 117 (270)
T ss_dssp SSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS--CC--EECCCCSCSSEEEEEECT
T ss_pred CCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc--eE--eeeecCCcCCCcceEECC
Confidence 55667777765433222 2 12334678999999999655554 888999976432 11 1121 2235678899988
Q ss_pred CCCCeEEEEeCCCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccc
Q psy9316 107 TNPDLLSTASGDKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167 (264)
Q Consensus 107 ~~~~~l~s~s~dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 167 (264)
++ +++++...++.|.+||..+.... .++++...++.|.+|+.... ... .....+...
T Consensus 118 ~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~--~~~-~~~~~~~~~ 193 (270)
T 1rwi_B 118 QG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN--NQV-VLPFTDITA 193 (270)
T ss_dssp TC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC--CEE-ECCCSSCCS
T ss_pred CC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC--ceE-eecccCCCC
Confidence 55 56666667889999976543211 12222223344444543221 110 011122245
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee--cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~--~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
...+++.+++ .++++...++.|.+||..+........ ...+.+++++|+|+.+++...++.|.+++...+.
T Consensus 194 p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 194 PWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ceEEEECCCC-CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 7789998864 777777778999999998765432222 2357889999999988999999999999976543
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=5.2e-07 Score=76.24 Aligned_cols=213 Identities=14% Similarity=0.205 Sum_probs=125.4
Q ss_pred EeecCCCeeEEEeecCceEEeccccc-cccccc-cCCCCEEEEEECCCCCeEEEEECC----CcEEEEEeccCCCCcccE
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHN-DIKEYQ-AHGSKVHSVAWSCDGRRLASGSFD----KSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~-~h~~~V~~l~~s~~g~~l~s~s~d----g~i~v~~~~~~~~~~~~~ 90 (264)
.+-|.+ .+.++...++.+..|+... .++.+. .+...+.+++++|+|+++++...+ +.|.+|+.+.. ... .
T Consensus 51 ~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~-~~~--~ 126 (333)
T 2dg1_A 51 NFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD-NLQ--D 126 (333)
T ss_dssp EECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC-SCE--E
T ss_pred EECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC-EEE--E
Confidence 344444 3444556677777776532 233332 566789999999999988776665 57888876532 221 1
Q ss_pred EEe--cccccEEeEEEecCCCCeEEEEeC------CCcEEEEECCCCCcc-------------------eEEEeecCCCc
Q psy9316 91 VYR--GHTGSVDQLCWHATNPDLLSTASG------DKTVRIWDARTQKSQ-------------------IMLASGSFDKS 143 (264)
Q Consensus 91 ~~~--~h~~~v~~i~~~~~~~~~l~s~s~------dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~ 143 (264)
.+. .+...+.++.++|++ +++++... .+.|..+|.++++.. .++++...++.
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp EECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred EEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe
Confidence 121 234568899999865 55555443 355666666543211 12233344566
Q ss_pred EEEEEeccCCCccce---E---EEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecC-------ceE
Q psy9316 144 VAIFALDKKGDLNKE---V---VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG-------ENI 210 (264)
Q Consensus 144 i~i~~~~~~~~~~~~---~---~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~-------~~~ 210 (264)
|.+|+.+..+..... . .+.++ .....++++++ +.++++...++.|.+||...+......... .+.
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~-G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~ 283 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSD-DNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRST 283 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTT-CCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCC
T ss_pred EEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCC-CCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcc
Confidence 777777543322110 0 11112 35677889875 467777777899999998644332222222 467
Q ss_pred EEEEcCCCCEEEEeeCCC------eEEEEEcc
Q psy9316 211 NITWAPNGNTIAVGNKED------LVTFIDVV 236 (264)
Q Consensus 211 ~v~~sp~g~~la~gs~d~------~i~~~d~~ 236 (264)
+++|+|+++.|.+++.++ .+.-+++.
T Consensus 284 ~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 284 HPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred eEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 899999988887666553 45555654
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.04 E-value=6.9e-09 Score=96.33 Aligned_cols=172 Identities=8% Similarity=-0.001 Sum_probs=105.1
Q ss_pred CceEEecc--ccccccccccCCCCEE---------EEEEC--CCCCe-EEEEECCCcEEEEEeccC----CCCcccEEEe
Q psy9316 32 DDYVKHFN--THNDIKEYQAHGSKVH---------SVAWS--CDGRR-LASGSFDKSVAIFALDKK----GDLNKEVVYR 93 (264)
Q Consensus 32 d~~~~~~~--~~~~~~~~~~h~~~V~---------~l~~s--~~g~~-l~s~s~dg~i~v~~~~~~----~~~~~~~~~~ 93 (264)
++...+|. .....+.+..|...+. ...|+ |||++ |+.++. ....+|.++.. +.. ..+.
T Consensus 46 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-~~~~l~~~~~~~~g~~~~---~~l~ 121 (662)
T 3azo_A 46 AGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-GDQRLYAFEPDAPGGAVP---RPLT 121 (662)
T ss_dssp TTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT-TTCCEEEECTTSTTCCCC---EECS
T ss_pred CCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC-CCCeEEEEcCCCCCCCCC---Eecc
Confidence 55555554 2334455666665555 55565 99998 776554 24445544433 221 2233
Q ss_pred c-----ccccEEeEEEecCCCCeEEEEeCC----------CcEEEEECCC------CCcceEEEeecCCCcEEEEEeccC
Q psy9316 94 G-----HTGSVDQLCWHATNPDLLSTASGD----------KTVRIWDART------QKSQIMLASGSFDKSVAIFALDKK 152 (264)
Q Consensus 94 ~-----h~~~v~~i~~~~~~~~~l~s~s~d----------g~i~vwd~~~------~~~~~~~~~~~~d~~i~i~~~~~~ 152 (264)
. |...+..++|+|++ +.|+.++.| ..|++||+.+ ++.
T Consensus 122 ~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------- 179 (662)
T 3azo_A 122 PVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--------------------- 179 (662)
T ss_dssp CCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---------------------
T ss_pred CCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---------------------
Confidence 3 56778899999966 566666655 4677777765 221
Q ss_pred CCccceEEEe-ccccceeeEEEcCCCCCEEEEEeCC--------CcEEEEeCC-CC---cceeEe-e-cCceEEEEEcCC
Q psy9316 153 GDLNKEVVYR-GHTGSVDQLCWHATNPDLLSTASGD--------KTVRIWDAR-TQ---KSQIIA-T-KGENINITWAPN 217 (264)
Q Consensus 153 ~~~~~~~~~~-~h~~~i~~i~~~~~~~~~i~s~~~d--------g~i~iwD~~-t~---~~~~~~-~-~~~~~~v~~sp~ 217 (264)
..+. .+...+..+.|+|++ ..|+.++.+ ..|++||+. ++ +..... . ...+..++|+||
T Consensus 180 ------~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 180 ------RELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp ------EESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred ------eEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 1112 233466778999865 566655544 479999998 55 322222 2 356778999999
Q ss_pred CCEEEEeeCCC--eEEEEEcc
Q psy9316 218 GNTIAVGNKED--LVTFIDVV 236 (264)
Q Consensus 218 g~~la~gs~d~--~i~~~d~~ 236 (264)
|++++++..++ .|++||+.
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTT
T ss_pred CeEEEEECCCCCeEEEEEECC
Confidence 99778888788 56666653
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.96 E-value=2.8e-08 Score=93.26 Aligned_cols=217 Identities=10% Similarity=-0.037 Sum_probs=121.2
Q ss_pred EeecCCCeeEEEee----cCceEEeccccccccccccCCCCE--EEEEECCCCCeEEEEECCCc-------------EEE
Q psy9316 17 KLLPSGSQFHLVCK----IDDYVKHFNTHNDIKEYQAHGSKV--HSVAWSCDGRRLASGSFDKS-------------VAI 77 (264)
Q Consensus 17 ~~~~~~~~~~~~~~----~d~~~~~~~~~~~~~~~~~h~~~V--~~l~~s~~g~~l~s~s~dg~-------------i~v 77 (264)
.+.|.|..+..+.. .+..|++++..........+-..+ ..++|+|||+.|+.++.|.. |.+
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~ 206 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY 206 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence 45555554443322 234677776533211101122222 67899999999999998876 999
Q ss_pred EEeccCCCCcccEEEe--cccccEEeEEEecCCCCeEEEEeCCC----cEEEEECCCCCcce-----------------E
Q psy9316 78 FALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDK----TVRIWDARTQKSQI-----------------M 134 (264)
Q Consensus 78 ~~~~~~~~~~~~~~~~--~h~~~v~~i~~~~~~~~~l~s~s~dg----~i~vwd~~~~~~~~-----------------~ 134 (264)
|++.... .....++. .|...+..+.|+|++. +++.++.++ .+.+||..+++... +
T Consensus 207 ~~l~t~~-~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l 284 (695)
T 2bkl_A 207 HTLGTEP-SKDTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRF 284 (695)
T ss_dssp EETTSCG-GGCEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEE
T ss_pred EECCCCc-hhceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcE
Confidence 9986532 11223333 3445788999999775 444445444 56667654432111 1
Q ss_pred EEeec---CCCcEEEEEeccCCCccceEEEecc--ccceeeEEEcCCCCCEEEEEeCCCcEEEEeCC--CCcceeEee--
Q psy9316 135 LASGS---FDKSVAIFALDKKGDLNKEVVYRGH--TGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQIIAT-- 205 (264)
Q Consensus 135 ~~~~~---~d~~i~i~~~~~~~~~~~~~~~~~h--~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~--t~~~~~~~~-- 205 (264)
++... .++.|.+|++.... ......+..+ ...+..+.|+ ++.++++...|+..+||.+. .+.......
T Consensus 285 ~~~s~~~~~~~~l~~~d~~~~~-~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~ 361 (695)
T 2bkl_A 285 YVLTDEGAPRQRVFEVDPAKPA-RASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPG 361 (695)
T ss_dssp EEEECTTCTTCEEEEEBTTBCS-GGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSS
T ss_pred EEEECCCCCCCEEEEEeCCCCC-ccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCC
Confidence 11121 12445555543221 1001122222 3457778886 45688888999998888554 322221222
Q ss_pred cCceEEEEEcCCCCEEEEee----CCCeEEEEEcccC
Q psy9316 206 KGENINITWAPNGNTIAVGN----KEDLVTFIDVVKS 238 (264)
Q Consensus 206 ~~~~~~v~~sp~g~~la~gs----~d~~i~~~d~~~~ 238 (264)
.+.+..++++|+++.++... ..+.+++||+.++
T Consensus 362 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 362 VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 23455678899998777443 3467999998653
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.96 E-value=1.2e-07 Score=80.78 Aligned_cols=167 Identities=7% Similarity=0.063 Sum_probs=110.1
Q ss_pred CCCEEEEEECCCCCeEEEEECC------------------------CcEEEEEeccCCCCcccEEEe-cccccEEeEEEe
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFD------------------------KSVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWH 105 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~d------------------------g~i~v~~~~~~~~~~~~~~~~-~h~~~v~~i~~~ 105 (264)
-+.+.+++++|+|+++++...+ +.|.+||... +... ..+. .+-.....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-g~~~--~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-AEIL--QSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-CCEE--EEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-CeEE--eccCCCccCCceEEEEC
Confidence 3679999999999999888777 4688887643 3221 1121 344568899999
Q ss_pred cCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe
Q psy9316 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185 (264)
Q Consensus 106 ~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~ 185 (264)
+++ +++++.+.++.|++||.+....... ..+... ..+. -..+......++++|.++.++++.+
T Consensus 100 ~~g-~l~v~d~~~~~v~~~~~~g~~~~~~-~~~~~~---------~~g~------~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 100 TDG-NYWVTDVALHQVFKLDPHSKEGPLL-ILGRSM---------QPGS------DQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp TTS-CEEEEETTTTEEEEECTTCSSCCSE-EESBTT---------BCCC------STTCCSSEEEEEECTTTCCEEEEEC
T ss_pred CCC-CEEEEECCCCEEEEEeCCCCeEEEE-EecccC---------CCCC------CccccCCCcEEEEeCCCCeEEEEeC
Confidence 855 5777778899999999864321111 111000 0000 0123345678999986667888876
Q ss_pred -CCCcEEEEeCCCCcceeEeec-----------CceEEEEEcCC-CCEEEEeeCCCeEEEEEccc
Q psy9316 186 -GDKTVRIWDARTQKSQIIATK-----------GENINITWAPN-GNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 186 -~dg~i~iwD~~t~~~~~~~~~-----------~~~~~v~~sp~-g~~la~gs~d~~i~~~d~~~ 237 (264)
.++.|++||............ ..+..++++|+ |+.+++...++.|++||..+
T Consensus 163 ~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 163 YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 699999999554332222111 23678999998 78888888999999999873
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.96 E-value=2.8e-07 Score=86.58 Aligned_cols=218 Identities=9% Similarity=0.047 Sum_probs=125.6
Q ss_pred EeecCCCeeEEEeecCc----eEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCc----------------
Q psy9316 17 KLLPSGSQFHLVCKIDD----YVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKS---------------- 74 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~----~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~---------------- 74 (264)
.+.|.|..+.......| .+++++.. +..... .....+..++|+|||+.|+.++.++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 45566654433322222 56766543 222211 12223567999999999999988776
Q ss_pred EEEEEeccCCCCcccEEEec--ccccEEeEEEecCCCCeEEEEeC-----CCcEEEEECCC------CC--cce------
Q psy9316 75 VAIFALDKKGDLNKEVVYRG--HTGSVDQLCWHATNPDLLSTASG-----DKTVRIWDART------QK--SQI------ 133 (264)
Q Consensus 75 i~v~~~~~~~~~~~~~~~~~--h~~~v~~i~~~~~~~~~l~s~s~-----dg~i~vwd~~~------~~--~~~------ 133 (264)
|.+|++.... .....++.. |...+..+.|+|++. +++.++. +..+++||+.+ +. ...
T Consensus 210 v~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 210 LYYHVLGTDQ-SEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp EEEEETTSCG-GGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred EEEEECCCCc-ccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 9999886432 121233333 445578899999765 4444443 56899999975 32 110
Q ss_pred ------------EEEeecCC---CcEEEEEeccCCCccceEEEecccc--ceeeEEEcCCCCCEEEEEeCCCc--EEEEe
Q psy9316 134 ------------MLASGSFD---KSVAIFALDKKGDLNKEVVYRGHTG--SVDQLCWHATNPDLLSTASGDKT--VRIWD 194 (264)
Q Consensus 134 ------------~~~~~~~d---~~i~i~~~~~~~~~~~~~~~~~h~~--~i~~i~~~~~~~~~i~s~~~dg~--i~iwD 194 (264)
+++....+ ..|.++++.... ......+..|.. .+..+.|++ ++.++++...|+. |.+||
T Consensus 288 ~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE-ESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC-GGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC-cccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEE
Confidence 11222212 235555543321 101123334433 577888874 4567888888885 55668
Q ss_pred CCCCcc-e-eEeecCceEEEEEcCCCCEEEEee----CCCeEEEEEcccCC
Q psy9316 195 ARTQKS-Q-IIATKGENINITWAPNGNTIAVGN----KEDLVTFIDVVKSL 239 (264)
Q Consensus 195 ~~t~~~-~-~~~~~~~~~~v~~sp~g~~la~gs----~d~~i~~~d~~~~~ 239 (264)
+.++.. . +....+.+..++++|+++.++... ..+.++.||+.++.
T Consensus 366 ~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 366 LATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 755543 2 222344567788999998776443 34689999987644
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.90 E-value=1.7e-06 Score=75.21 Aligned_cols=224 Identities=14% Similarity=0.122 Sum_probs=127.2
Q ss_pred ecCCCCCceEeecCCCeeEEEee---------cCceEEeccccc--cccccccC-------CCCEEEEEECCCCCeEEEE
Q psy9316 8 FHTPKSPEYKLLPSGSQFHLVCK---------IDDYVKHFNTHN--DIKEYQAH-------GSKVHSVAWSCDGRRLASG 69 (264)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~--~~~~~~~h-------~~~V~~l~~s~~g~~l~s~ 69 (264)
+...+.|...+.|.+..+..... .++.+..++..+ .+.++..- ......+.|+|||++|+.+
T Consensus 63 i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 63 VNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF 142 (373)
T ss_pred ecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEE
Confidence 33444566677777765443321 255666665532 22222111 1234578999999999998
Q ss_pred EC--CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEE------------
Q psy9316 70 SF--DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML------------ 135 (264)
Q Consensus 70 s~--dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~------------ 135 (264)
.. ++.|.++| ... ..... .+. .. .++.+.|.+.+.+++.+.||.+.++|. +++.....
T Consensus 143 n~~~~~~v~viD-~t~-~~~~~-~i~-~~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGG-SSDDQ-LLS-SP---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred ecCCCCeEEEEE-CCC-CEEeE-EcC-CC---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 75 47899998 643 22111 011 11 123445666667777888999999998 54432100
Q ss_pred -------------EeecCCCcEEEEEeccCCCccceEEEe--c--------cccceeeEEEcCCCCCEEEEEe-------
Q psy9316 136 -------------ASGSFDKSVAIFALDKKGDLNKEVVYR--G--------HTGSVDQLCWHATNPDLLSTAS------- 185 (264)
Q Consensus 136 -------------~~~~~d~~i~i~~~~~~~~~~~~~~~~--~--------h~~~i~~i~~~~~~~~~i~s~~------- 185 (264)
+..+..+.+.+.|+....... ...+. . ...+...+.++|++..++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~ 293 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISAAGATN-KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKL 293 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccCCcceE-eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccc
Confidence 011123444555543211000 00010 0 0122344678886665555443
Q ss_pred --CCCcEEEEeCCCCccee-EeecCceEEEEEcCCCC-EEEEee-CCCeEEEEEcccCCC
Q psy9316 186 --GDKTVRIWDARTQKSQI-IATKGENINITWAPNGN-TIAVGN-KEDLVTFIDVVKSLP 240 (264)
Q Consensus 186 --~dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~-~la~gs-~d~~i~~~d~~~~~~ 240 (264)
.++.|.++|+.+.+... .........++|+|||+ .++++. .++.|.+||+.+...
T Consensus 294 ~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 294 HAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred cCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 24689999999987533 33344578999999999 666666 589999999876443
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.89 E-value=6.6e-07 Score=82.08 Aligned_cols=193 Identities=11% Similarity=0.046 Sum_probs=124.3
Q ss_pred eEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEec-cCCCCcccEEEecccccEEe
Q psy9316 25 FHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALD-KKGDLNKEVVYRGHTGSVDQ 101 (264)
Q Consensus 25 ~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~-~~~~~~~~~~~~~h~~~v~~ 101 (264)
+.++...++.+..++.. +.+.++. ....+..+.|+|||+++++++.|+.|.+||+. ..... ...+.. ......
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~--v~~i~~-G~~P~~ 244 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT--VAEIKI-GSEARS 244 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE--EEEEEC-CSEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE--eEEEec-CCCCce
Confidence 33455667888887653 3444553 33457799999999999999999999999984 11221 122222 223568
Q ss_pred EEEe----cCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEecccc-ceeeEEEcCC
Q psy9316 102 LCWH----ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG-SVDQLCWHAT 176 (264)
Q Consensus 102 i~~~----~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~-~i~~i~~~~~ 176 (264)
+.|+ |++..++++...++.+.++|..+.+....+.++.... ++. ..|.. ++..+..++.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~---------~~~-------~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTY---------DEQ-------EYHPEPRVAAILASHY 308 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECT---------TTC-------CEESCCCEEEEEECSS
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccc---------ccc-------cccCCCceEEEEEcCC
Confidence 8998 5554444444457999999988765433332211000 000 00112 4666777777
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcceeE---eecCceEEEEEcCCCCEEEEee-CCCeEEEEEccc
Q psy9316 177 NPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNTIAVGN-KEDLVTFIDVVK 237 (264)
Q Consensus 177 ~~~~i~s~~~dg~i~iwD~~t~~~~~~---~~~~~~~~v~~sp~g~~la~gs-~d~~i~~~d~~~ 237 (264)
++.++++...+|.|.++|..+...... ........+.|+|+|+++++++ .++.|.++|+.+
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred CCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 677888888899999999987542111 1123456789999999987665 689999999875
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.88 E-value=1.2e-07 Score=89.20 Aligned_cols=162 Identities=11% Similarity=0.037 Sum_probs=98.1
Q ss_pred CCCCEEEEEECCCCCeEEEEECCC-----cEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCc----
Q psy9316 50 HGSKVHSVAWSCDGRRLASGSFDK-----SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT---- 120 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~s~s~dg-----~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~---- 120 (264)
|...+..++|||||++|+.++.++ .|++||+.... ... ... ....+..++|+|++ +.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~-~~~-~~~--~~~~~~~~~wspDg-~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK-ELP-DVL--ERVKFSCMAWTHDG-KGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE-EEE-EEE--EEECSCCEEECTTS-SEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-CCc-ccc--cCcccceEEEEeCC-CEEEEEEECCccccc
Confidence 444688999999999999876543 89999986422 211 112 12236678999966 55666666654
Q ss_pred ------------EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC--
Q psy9316 121 ------------VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-- 186 (264)
Q Consensus 121 ------------i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~-- 186 (264)
|++|++.+++....+ ++ ....|...+..+.|+|++..++++...
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~----------v~------------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDIL----------CA------------EFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEE----------EE------------CCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred cccccccCCCCEEEEEECCCCcccceE----------Ee------------ccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 777777654322111 00 001233446678899876544443331
Q ss_pred --CCcEEEEeCCC------Cc--ceeEeecCceEEEEEcCCCCEEEEeeCCC----eEEEEEcccC
Q psy9316 187 --DKTVRIWDART------QK--SQIIATKGENINITWAPNGNTIAVGNKED----LVTFIDVVKS 238 (264)
Q Consensus 187 --dg~i~iwD~~t------~~--~~~~~~~~~~~~v~~sp~g~~la~gs~d~----~i~~~d~~~~ 238 (264)
+..|++||+.+ +. ..............|+|+|+.|+..+..+ .|.+||+.++
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 57899999986 42 22222222222235899999988777644 5999998654
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.88 E-value=2.1e-07 Score=77.53 Aligned_cols=188 Identities=11% Similarity=0.061 Sum_probs=120.4
Q ss_pred CeeEEEeecCceEEeccc--cccccccccCC-CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecc-ccc
Q psy9316 23 SQFHLVCKIDDYVKHFNT--HNDIKEYQAHG-SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH-TGS 98 (264)
Q Consensus 23 ~~~~~~~~~d~~~~~~~~--~~~~~~~~~h~-~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h-~~~ 98 (264)
.+++++++.++.+..|+. ++.+-++..+. ..+.++.++|+|+.++ +.++.|..||. . +. ....+..+ ...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~-G~--~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-D-GR--ELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-T-SC--EEEEEECCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-C-CC--EEEEEcCCCCcc
Confidence 355556677888888764 45566666665 4688999999999888 45777888875 2 32 22223333 235
Q ss_pred EEeEEEecCCCCeEEEEeC-CCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC
Q psy9316 99 VDQLCWHATNPDLLSTASG-DKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 177 (264)
Q Consensus 99 v~~i~~~~~~~~~l~s~s~-dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~ 177 (264)
+..+.+.+++ +++++.+. ++.+..+|.+ ++.. |.+...... ..+......+...+ +
T Consensus 79 ~~~~~~~~dG-~~lv~~~~~~~~v~~vd~~-Gk~l--------------~~~~~~~~~------~~~~~~~~~v~~~~-~ 135 (276)
T 3no2_A 79 MQTARILPDG-NALVAWCGHPSTILEVNMK-GEVL--------------SKTEFETGI------ERPHAQFRQINKNK-K 135 (276)
T ss_dssp EEEEEECTTS-CEEEEEESTTEEEEEECTT-SCEE--------------EEEEECCSC------SSGGGSCSCCEECT-T
T ss_pred ccccEECCCC-CEEEEecCCCCEEEEEeCC-CCEE--------------EEEeccCCC------CcccccccCceECC-C
Confidence 6777777754 67776666 6666666653 2211 211111110 11222333445555 4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 178 PDLLSTASGDKTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 178 ~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
+.++++...++.|..||.+ ++.... .....+.++...++|+.+++++.++.|..+|..++..
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 5788888899999999998 554333 2334566788899999999999899999999774443
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.82 E-value=1.2e-07 Score=88.85 Aligned_cols=161 Identities=14% Similarity=0.056 Sum_probs=96.9
Q ss_pred cCCCCEEEEEECCCCCeEEE-----EECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCc---
Q psy9316 49 AHGSKVHSVAWSCDGRRLAS-----GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT--- 120 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s-----~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~--- 120 (264)
+|...+..++|||||++|+. |+.+..|++||+........ ..+.. .....++|+|++ +.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--~~~~~~~wspDg-~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVIEG--GKYATPKWTPDS-KGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCBSC--CTTCCCEECTTS-SEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-cccCc--ccccceEEecCC-CEEEEEEecCCCCC
Confidence 45557899999999999984 34456899999875332101 01111 112578999966 56667777665
Q ss_pred ----------EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCC--
Q psy9316 121 ----------VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK-- 188 (264)
Q Consensus 121 ----------i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg-- 188 (264)
|++|++.++.....++ + ....|...+..+.|+|++..++++ +.++
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv----------~------------~~~~~~~~~~~~~~SpDG~~l~~~-~~~~~~ 250 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVV----------H------------ERTGDPTTFLQSDLSRDGKYLFVY-ILRGWS 250 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEE----------E------------CCCCCTTCEEEEEECTTSCCEEEE-EEETTT
T ss_pred ccccCCCCCEEEEEECCCCchhceEE----------E------------ecCCCCEEEEEEEECCCCCEEEEE-EeCCCC
Confidence 8888887654321111 1 012234467788999976555444 4444
Q ss_pred --cEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeC----CCeEEEEEcccC
Q psy9316 189 --TVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNK----EDLVTFIDVVKS 238 (264)
Q Consensus 189 --~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~----d~~i~~~d~~~~ 238 (264)
.|++||..++...... .........| |+|+ ++..+. ++.|.+||+.++
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 6777776655443332 2334455556 6677 555554 578999998654
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.81 E-value=9.8e-07 Score=74.82 Aligned_cols=203 Identities=11% Similarity=0.145 Sum_probs=111.4
Q ss_pred EeecCCCeeEEEeecC--ce--EEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECC-------------------
Q psy9316 17 KLLPSGSQFHLVCKID--DY--VKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFD------------------- 72 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d--~~--~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~d------------------- 72 (264)
.+.|.|..+....... +. ++.++.. ...+.+..+.. +..+.|+|||+.|+.++.+
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g 143 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDD 143 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecC
Confidence 5667676544332222 33 4444432 22222333334 8999999999999987743
Q ss_pred --------CcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC-------cEEEEECCCCCcceEE--
Q psy9316 73 --------KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK-------TVRIWDARTQKSQIML-- 135 (264)
Q Consensus 73 --------g~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg-------~i~vwd~~~~~~~~~~-- 135 (264)
..|.+|++.. +... ..+.. . .+..+.|+|++ ++++++.++ ...+|.+++++...+.
T Consensus 144 ~~~~~~~~~~l~~~d~~~-~~~~--~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~ 216 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTES-EEVI--EEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK 216 (347)
T ss_dssp ------CEEEEEEEETTT-TEEE--EEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE
T ss_pred cccccCccceEEEEECCC-CeEE--eeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC
Confidence 4677787653 2210 12222 3 67888999866 777776542 3444443333211110
Q ss_pred ---EeecCCCc----------------EEEEEeccCCCccceEEEeccccceee-EEEcCCCCCEEEEEeCCCcEEEEeC
Q psy9316 136 ---ASGSFDKS----------------VAIFALDKKGDLNKEVVYRGHTGSVDQ-LCWHATNPDLLSTASGDKTVRIWDA 195 (264)
Q Consensus 136 ---~~~~~d~~----------------i~i~~~~~~~~~~~~~~~~~h~~~i~~-i~~~~~~~~~i~s~~~dg~i~iwD~ 195 (264)
...+.||. ..||.++ .+... .....|...+.. +.|+ + + ++++++.++.++|| +
T Consensus 217 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~--~l~~~~~~~~~~~~~~s-d-g-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 217 VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVM--GILDEVDRGVGQAKIKD-G-K-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEE--ESSTTCCSEEEEEEEET-T-E-EEEEEEETTEEEEE-E
T ss_pred cceeeECCCCCEEEEEEccccCCccccceEEEEC-CCceE--eccccCCcccCCccEEc-C-c-EEEEEecCCcEEEE-E
Confidence 00022222 1222222 11111 112234556775 8897 4 4 88888999999999 8
Q ss_pred CCCcceeE-eecCceEEEEEcCCCCEEEEeeCCCeE-EEEEcc
Q psy9316 196 RTQKSQII-ATKGENINITWAPNGNTIAVGNKEDLV-TFIDVV 236 (264)
Q Consensus 196 ~t~~~~~~-~~~~~~~~v~~sp~g~~la~gs~d~~i-~~~d~~ 236 (264)
.+++.... ...+.+.+++|+| ..+++++.++.. .+|.+.
T Consensus 290 ~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 290 WDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 75443222 2244577899999 677777766654 777764
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.80 E-value=1e-05 Score=66.69 Aligned_cols=203 Identities=9% Similarity=0.042 Sum_probs=122.1
Q ss_pred eeEEEeecCceEEeccccccccccc--cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEe
Q psy9316 24 QFHLVCKIDDYVKHFNTHNDIKEYQ--AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~~~~~~~~~--~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~ 101 (264)
.+.+....++.+..++....+..+. .+...+.+++++++|+..++...++.|..|+.+ +.... .........+..
T Consensus 27 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~-~~~~~~~~~~~~ 103 (299)
T 2z2n_A 27 KVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK--GIIKE-YTLPNPDSAPYG 103 (299)
T ss_dssp CEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEE-EECSSTTCCEEE
T ss_pred CEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC--CcEEE-EeCCCcCCCcee
Confidence 3333333356666665544444433 245679999999999988776667889888754 22211 111123456888
Q ss_pred EEEecCCCCeEEEEeCCCcEEEEECCCCCcce--------------------EEEeecCCCcEEEEEeccCCCccceEEE
Q psy9316 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQI--------------------MLASGSFDKSVAIFALDKKGDLNKEVVY 161 (264)
Q Consensus 102 i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~--------------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~ 161 (264)
+++.+++ .+.++...++.|..||. +++... +.++...++.+..++. .+.... ...
T Consensus 104 i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~~~-~~~ 178 (299)
T 2z2n_A 104 ITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE--SGDITE-FKI 178 (299)
T ss_dssp EEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT--TCCEEE-EEC
T ss_pred eEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC--CCcEEE-eeC
Confidence 8888744 66666666888999987 322111 1111222233333432 222211 111
Q ss_pred eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeec---CceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 162 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATK---GENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 162 ~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~---~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
......+..+++.++ +.++++...++.|.+||. ++........ ..+..++++++|+.+++...++.|..||..
T Consensus 179 ~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 179 PTPASGPVGITKGND-DALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp SSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CCCCCcceeEEECCC-CCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 223345778888875 457776667889999999 5553322222 457789999999977776678899999973
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.79 E-value=1.2e-06 Score=74.32 Aligned_cols=166 Identities=12% Similarity=0.069 Sum_probs=94.5
Q ss_pred CCEEEEEECCCCCeEEEEECC---Cc--EEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeC---------
Q psy9316 52 SKVHSVAWSCDGRRLASGSFD---KS--VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--------- 117 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s~d---g~--i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~--------- 117 (264)
..+..+.|+|||++|+.++.+ +. |.+|++.. +. ...... +.. +..+.|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-g~--~~~l~~-~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-LS--SKKILE-AKN-IRSLEWNEDSR-KLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-TE--EEEEEE-ESE-EEEEEECTTSS-EEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-Cc--eEEEEc-CCC-ccceeECCCCC-EEEEEEccCCCcCCcE
Confidence 567889999999999987754 34 55555542 21 111222 233 88999999764 4444442
Q ss_pred ------------------CCcEEEEECCCCCc-ce---------------EEEeecCC------C-cEEEEEeccCCCcc
Q psy9316 118 ------------------DKTVRIWDARTQKS-QI---------------MLASGSFD------K-SVAIFALDKKGDLN 156 (264)
Q Consensus 118 ------------------dg~i~vwd~~~~~~-~~---------------~~~~~~~d------~-~i~i~~~~~~~~~~ 156 (264)
...|++||+.+++. .. +++++..+ . ...+|.++ .+..
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~~~- 210 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DGKE- 210 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TTEE-
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCeEEEEEecccccccccccccEEEeC-CCce-
Confidence 25688999987654 11 11122221 1 23444443 2221
Q ss_pred ceEEEeccccceeeEEEcCCCCCEEEEEeCC--------CcEEEEeCCCCcceeEe--ecCceEE-EEEcCCCCEEEEee
Q psy9316 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGD--------KTVRIWDARTQKSQIIA--TKGENIN-ITWAPNGNTIAVGN 225 (264)
Q Consensus 157 ~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d--------g~i~iwD~~t~~~~~~~--~~~~~~~-v~~sp~g~~la~gs 225 (264)
..+..+ ..+.. ++|++. .|+.++.+ ..|.+|| +++..... ....+.. +.|+ +| .+++++
T Consensus 211 --~~l~~~-~~~~~--~spdg~-~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 211 --EKMFEK-VSFYA--VDSDGE-RILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp --EEEEEE-ESEEE--EEECSS-CEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred --EEeccC-cceee--ECCCCC-EEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 112222 33333 366554 44444433 4688888 44322211 1234555 8899 88 889999
Q ss_pred CCCeEEEEEcc
Q psy9316 226 KEDLVTFIDVV 236 (264)
Q Consensus 226 ~d~~i~~~d~~ 236 (264)
.++.+++| +.
T Consensus 281 ~~~~~~l~-~~ 290 (347)
T 2gop_A 281 EEGSVNLY-IW 290 (347)
T ss_dssp ETTEEEEE-EE
T ss_pred cCCcEEEE-Ec
Confidence 99999999 87
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.78 E-value=7.1e-06 Score=68.35 Aligned_cols=202 Identities=11% Similarity=0.164 Sum_probs=116.8
Q ss_pred ecCceEEecccc-cccccccc-----CCCCEEEEEECCC-CCeEEEEECCCcEEEEEeccCCCCccc-EE-Ee-cccccE
Q psy9316 30 KIDDYVKHFNTH-NDIKEYQA-----HGSKVHSVAWSCD-GRRLASGSFDKSVAIFALDKKGDLNKE-VV-YR-GHTGSV 99 (264)
Q Consensus 30 ~~d~~~~~~~~~-~~~~~~~~-----h~~~V~~l~~s~~-g~~l~s~s~dg~i~v~~~~~~~~~~~~-~~-~~-~h~~~v 99 (264)
..++.+..|+.. ..+..+.. +...+.++.++++ |+++++ +.++.|.+|+.+ +..... .. .. .....+
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLVVQTD--GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEEEETT--SCEEECCSBCTTSCBCBCC
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEEEEeCC--CCEEEEEeccCCCccccCC
Confidence 556777777632 23333332 5567899999999 664444 444578888765 322110 00 00 112347
Q ss_pred EeEEEecCCCCeEEEEeCC---------------CcEEEEECCCCCcc-----------------------eEEEeecCC
Q psy9316 100 DQLCWHATNPDLLSTASGD---------------KTVRIWDARTQKSQ-----------------------IMLASGSFD 141 (264)
Q Consensus 100 ~~i~~~~~~~~~l~s~s~d---------------g~i~vwd~~~~~~~-----------------------~~~~~~~~d 141 (264)
.++.+++++ ++.++...+ +.+..||.+ ++.. .++++...+
T Consensus 120 ~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 888998855 555555444 567777754 2211 112222334
Q ss_pred CcEEEEEeccCCCccceE---EEeccc-cceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-eeEee-cCceEEEEEc
Q psy9316 142 KSVAIFALDKKGDLNKEV---VYRGHT-GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIAT-KGENINITWA 215 (264)
Q Consensus 142 ~~i~i~~~~~~~~~~~~~---~~~~h~-~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~-~~~~~-~~~~~~v~~s 215 (264)
+.|.+|+....+...... .+..+. .....++++++ +.++++...++.|.+||.++++. ..... ...+.+++++
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~ 276 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFK 276 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEEC
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC-CCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEEC
Confidence 556666654222211111 112222 45677888875 46777777889999999986553 22222 2567889999
Q ss_pred CCCCEEEE-eeCCCeEEEEEccc
Q psy9316 216 PNGNTIAV-GNKEDLVTFIDVVK 237 (264)
Q Consensus 216 p~g~~la~-gs~d~~i~~~d~~~ 237 (264)
|+|+.|.+ ...++.|..|++..
T Consensus 277 ~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 277 PQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCCeEEEEeCCC
Confidence 99995544 45567899999764
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.76 E-value=4.8e-07 Score=77.02 Aligned_cols=203 Identities=10% Similarity=0.065 Sum_probs=119.6
Q ss_pred CCCeeEEEeecCceEEecccc--ccccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEeccc-
Q psy9316 21 SGSQFHLVCKIDDYVKHFNTH--NDIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHT- 96 (264)
Q Consensus 21 ~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~- 96 (264)
.++.+-+....++.+..++.. +.+.++. .......+++++++ .|+.+. .++.|.+||.... ... ..+....
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~-~~~--~~i~~g~~ 126 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTY-EIT--GYIECPDM 126 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTT-EEE--EEEECTTC
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCC-eEE--EEEEcCCc
Confidence 455555555567778777653 4455553 34568899999888 455555 8899999997642 111 1122111
Q ss_pred ----ccEEeEEEecCCCCeEEEEe-CCCcEEEEECCCCCcce------------------EEEeecCC----------Cc
Q psy9316 97 ----GSVDQLCWHATNPDLLSTAS-GDKTVRIWDARTQKSQI------------------MLASGSFD----------KS 143 (264)
Q Consensus 97 ----~~v~~i~~~~~~~~~l~s~s-~dg~i~vwd~~~~~~~~------------------~~~~~~~d----------~~ 143 (264)
.....+++ .++.++++.. .++.|.++|+++++... ++++...+ +.
T Consensus 127 ~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 127 DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 14456666 2444444443 48999999998754221 22222222 45
Q ss_pred EEEEEeccCCCccceEEEecc-ccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-E-ee--cCceEEEEEcC-C
Q psy9316 144 VAIFALDKKGDLNKEVVYRGH-TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-I-AT--KGENINITWAP-N 217 (264)
Q Consensus 144 i~i~~~~~~~~~~~~~~~~~h-~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~-~~--~~~~~~v~~sp-~ 217 (264)
+.++|..... ... .+.-. ......++++|++..++++ .. .|.+||..+++... . .. ...+..++++| +
T Consensus 205 v~~id~~t~~-v~~--~~~~~~g~~p~~la~~~d~~~lyv~-~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 205 LYRIDAETFT-VEK--QFKFKLGDWPSEVQLNGTRDTLYWI-NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEEETTTTE-EEE--EEECCTTCCCEEEEECTTSCEEEEE-SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred EEEEECCCCe-EEE--EEecCCCCCceeEEEecCCCEEEEE-cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 5566543211 111 11111 1246789999866544443 32 99999998876421 1 11 24577899999 5
Q ss_pred CCEEEEe----eCCCeEEEEEcc
Q psy9316 218 GNTIAVG----NKEDLVTFIDVV 236 (264)
Q Consensus 218 g~~la~g----s~d~~i~~~d~~ 236 (264)
++.+++. ..++.|.+||..
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT
T ss_pred CeEEEEcccccccCCEEEEECCC
Confidence 5666666 678999999975
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.74 E-value=2.6e-06 Score=74.92 Aligned_cols=190 Identities=12% Similarity=0.101 Sum_probs=115.4
Q ss_pred eeEEEeecCceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCC--cEEEEEeccCCCCcccEEEec-ccccE
Q psy9316 24 QFHLVCKIDDYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDK--SVAIFALDKKGDLNKEVVYRG-HTGSV 99 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg--~i~v~~~~~~~~~~~~~~~~~-h~~~v 99 (264)
.+.++...++.|+.++.. ..+..+........ ++|+++++.|+.+..++ .|.+++............... ....+
T Consensus 143 ~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p 221 (409)
T 3hrp_A 143 TVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKI 221 (409)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCC
T ss_pred CEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCc
Confidence 333344445667777553 23333332222334 89999999999988766 677776543211111000112 34557
Q ss_pred EeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccc--cceeeEEEcCCC
Q psy9316 100 DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHT--GSVDQLCWHATN 177 (264)
Q Consensus 100 ~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~--~~i~~i~~~~~~ 177 (264)
.+++++|.++.+++ +..++.|+.||.+++... .+.... . .++. .+...++|+|.+
T Consensus 222 ~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~-----------~----------~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 222 GAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-LIKQLE-----------L----------SGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp CBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-EEEECC-----------C----------CSCCCCSSCCEEEEETTT
T ss_pred EEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-EEeccc-----------c----------cCCCCCCccccEEEeCCC
Confidence 78899886555444 666889999998765421 111000 0 0011 112378999876
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcceeEeec---------------CceEEEEEcCCCCEEEEee-CCCeEEEEEccc
Q psy9316 178 PDLLSTASGDKTVRIWDARTQKSQIIATK---------------GENINITWAPNGNTIAVGN-KEDLVTFIDVVK 237 (264)
Q Consensus 178 ~~~i~s~~~dg~i~iwD~~t~~~~~~~~~---------------~~~~~v~~sp~g~~la~gs-~d~~i~~~d~~~ 237 (264)
+.++++...++.|+.||............ ..+..++++|+|+++++-+ .++.|+.||+.+
T Consensus 279 g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp TEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 77888888899999999876422221111 2367899999999888888 899999999543
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.69 E-value=4.5e-06 Score=70.00 Aligned_cols=209 Identities=16% Similarity=0.127 Sum_probs=116.5
Q ss_pred EeecCCCeeEEEeecCceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE-EEecc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV-VYRGH 95 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~-~~~~h 95 (264)
.+.|.+..+..+...++.+..|+.......+..+...+..+.++++|+++++...++.|.+|+.+ +...... ...+.
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYAGK 128 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEETTE
T ss_pred eEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccCCC
Confidence 45566654545555566777776544456666677789999999999976665555788888753 3321110 01111
Q ss_pred -cccEEeEEEecCCCCeEEE----EeC-------------CCcEEEEECCCCCcceE-----------------EEeecC
Q psy9316 96 -TGSVDQLCWHATNPDLLST----ASG-------------DKTVRIWDARTQKSQIM-----------------LASGSF 140 (264)
Q Consensus 96 -~~~v~~i~~~~~~~~~l~s----~s~-------------dg~i~vwd~~~~~~~~~-----------------~~~~~~ 140 (264)
...+.++.+++++ ++.++ |.. .+.|..+|.++++.... +..+..
T Consensus 129 ~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 129 RLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp ECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEEC
T ss_pred ccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEec
Confidence 1346678888855 56654 332 25577777755432211 111111
Q ss_pred C------CcEEEEEeccCCCccceEEE-eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEE
Q psy9316 141 D------KSVAIFALDKKGDLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINIT 213 (264)
Q Consensus 141 d------~~i~i~~~~~~~~~~~~~~~-~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~ 213 (264)
. +.|..|++...+ +.....+ .........+++.+++ .+.++ +.+ .|.+||...+..........+.+++
T Consensus 208 ~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G-~lwv~-~~~-gv~~~~~~g~~~~~~~~~~~~~~~~ 283 (305)
T 3dr2_A 208 PEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGG-WLWSS-SGT-GVCVFDSDGQLLGHIPTPGTASNCT 283 (305)
T ss_dssp CC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTS-CEEEC-CSS-EEEEECTTSCEEEEEECSSCCCEEE
T ss_pred CCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCC-CEEEe-cCC-cEEEECCCCCEEEEEECCCceeEEE
Confidence 1 344445443222 1111111 1112233457777654 45543 344 4999998655443333444577899
Q ss_pred EcCCCCEEEEeeCCCeEEE
Q psy9316 214 WAPNGNTIAVGNKEDLVTF 232 (264)
Q Consensus 214 ~sp~g~~la~gs~d~~i~~ 232 (264)
|+|+++.|.+++.++..++
T Consensus 284 f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 284 FDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp ECTTSCEEEEEETTEEEEE
T ss_pred EeCCCCEEEEEcCCeEEEE
Confidence 9999999988887655443
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.67 E-value=2.3e-06 Score=69.78 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=107.0
Q ss_pred CEEEEEECCCCCeEE-EEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc
Q psy9316 53 KVHSVAWSCDGRRLA-SGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~-s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~ 131 (264)
...+++++++|+..+ +.+.++.|.+|+..... . ......+...+.++++++++ +++++.. ++.|.+||.+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~--~-~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG--T-TVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc--c-ceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE
Confidence 678999999998766 44677899999754211 1 11111233457788998854 4555544 88999999765331
Q ss_pred c-------------------eEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEE
Q psy9316 132 Q-------------------IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192 (264)
Q Consensus 132 ~-------------------~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~i 192 (264)
. .++++...++.|.+++. .... ..............+++++++ .++++...++.|.+
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA--GSKT-QTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVK 175 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECT--TCCS-CEECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEE
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEEC--CCce-eEeeccccCCCceeEEEeCCC-CEEEEECCCCEEEE
Confidence 1 01222222333444421 1111 111111222356778888854 57777777889999
Q ss_pred EeCCCCcceeEee--cCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 193 WDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 193 wD~~t~~~~~~~~--~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
||..+........ ...+..++++|+|..+++...++.|..||...
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred EecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 9998765422211 24577899999998888877888999999754
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.63 E-value=8.1e-07 Score=83.89 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=92.5
Q ss_pred CCCCEEEEEECCCCCeEEEEECC-----CcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCc----
Q psy9316 50 HGSKVHSVAWSCDGRRLASGSFD-----KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT---- 120 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~s~s~d-----g~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~---- 120 (264)
|...+..++|||||++|+.++.+ ..|++||+.... ... ...+...+..++|+|+ +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-~~~---~~~~~~~~~~~~wspD--~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK-PLA---DELKWVKFSGLAWLGN--DALLYSRFAEPKEGQ 234 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC-EEE---EEEEEEESCCCEESTT--SEEEEEECCCC----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC-CCC---ccCCCceeccEEEECC--CEEEEEEecCccccc
Confidence 33468899999999999987654 359999986532 211 1112222357889996 55555665543
Q ss_pred ----------EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEe--ccccceeeEEEcCCCCCEEEEEeCC-
Q psy9316 121 ----------VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGD- 187 (264)
Q Consensus 121 ----------i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~--~h~~~i~~i~~~~~~~~~i~s~~~d- 187 (264)
|++|++.++..... ..+. .+...+..+.|+|++. +|+..+.+
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~------------------------lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~ 289 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQ------------------------PVFATPELPKRGHGASVSSDGR-WVVITSSEG 289 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCE------------------------EEECCTTCTTCEEEEEECTTSC-EEEEEEECT
T ss_pred ccccCCCCCEEEEEECCCCchhCE------------------------EEeccCCCCeEEEEEEECCCCC-EEEEEEEcc
Confidence 55555544321111 1111 2223467788998654 44444433
Q ss_pred ----CcEEEEeCCCC--c-ceeEee-cCceEEEEEcCCCCEEEEeeCCC----eEEEEEcccC
Q psy9316 188 ----KTVRIWDARTQ--K-SQIIAT-KGENINITWAPNGNTIAVGNKED----LVTFIDVVKS 238 (264)
Q Consensus 188 ----g~i~iwD~~t~--~-~~~~~~-~~~~~~v~~sp~g~~la~gs~d~----~i~~~d~~~~ 238 (264)
..|++||+.++ + ...... ....... ++|+|+.|+..+.++ .|.+||+.++
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 48999999876 3 322222 2223333 459999998888644 4999998653
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.63 E-value=9.2e-06 Score=70.05 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=37.4
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC--cceeEe--ecCceEEEEEcCCCC
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQ--KSQIIA--TKGENINITWAPNGN 219 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~--~~~~~~--~~~~~~~v~~sp~g~ 219 (264)
...+.|+|++. ++++++. +.|.+||..+. +..... ....+..++++|+|.
T Consensus 307 p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CCEEEEETTTT-EEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 78899999765 6666665 99999999998 543222 234578899999986
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.62 E-value=3.6e-05 Score=64.19 Aligned_cols=205 Identities=12% Similarity=0.082 Sum_probs=116.0
Q ss_pred EeecCCCeeEEEeecCceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe--c
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR--G 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~--~ 94 (264)
.+.|.+..+..+....+.+..|+..............+.+++++++|+++++ . +..|.+|+.+. +......... .
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~-g~~~~~~~~~~~~ 95 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE-QSAVVLATVDNDK 95 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT-TEEEEEEECCTTC
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCC-CcEEEEEecCCCC
Confidence 3456555554444456677777654322222234567999999999996554 3 56788888653 2221111011 0
Q ss_pred ccccEEeEEEecCCCCeEEEEeC-----------CCcEEEEECCCCCc------------------ceEEEeecCCCcEE
Q psy9316 95 HTGSVDQLCWHATNPDLLSTASG-----------DKTVRIWDARTQKS------------------QIMLASGSFDKSVA 145 (264)
Q Consensus 95 h~~~v~~i~~~~~~~~~l~s~s~-----------dg~i~vwd~~~~~~------------------~~~~~~~~~d~~i~ 145 (264)
....+.++.++|++ ++.++... .+.+..+|...... ..++++.+.++.|.
T Consensus 96 ~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~ 174 (297)
T 3g4e_A 96 KNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVD 174 (297)
T ss_dssp SSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEE
T ss_pred CCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEE
Confidence 12347888998865 45543322 12344444332110 01234444556677
Q ss_pred EEEec-cCCCccceEE---EeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-Eeec-CceEEEEEc-CCC
Q psy9316 146 IFALD-KKGDLNKEVV---YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-IATK-GENINITWA-PNG 218 (264)
Q Consensus 146 i~~~~-~~~~~~~~~~---~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~~~~-~~~~~v~~s-p~g 218 (264)
.|+++ ..+.+..... +..+......+++.+++ .+.++...++.|..||..+++... ...+ ..+.+++|+ |++
T Consensus 175 ~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 175 AFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 77764 3333221111 12233456778888754 677777778899999999776432 2333 468899998 898
Q ss_pred CEEEEeeC
Q psy9316 219 NTIAVGNK 226 (264)
Q Consensus 219 ~~la~gs~ 226 (264)
+.|.+.+.
T Consensus 254 ~~L~vt~~ 261 (297)
T 3g4e_A 254 SEMYVTCA 261 (297)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEcC
Confidence 87766554
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.62 E-value=4.1e-06 Score=79.08 Aligned_cols=177 Identities=12% Similarity=0.103 Sum_probs=102.3
Q ss_pred EEEEECCCCCeEEEEECCCc--------------EEEEEeccCCCCcccEEEecc--cccEEeEEEecCCCCeEEEEeCC
Q psy9316 55 HSVAWSCDGRRLASGSFDKS--------------VAIFALDKKGDLNKEVVYRGH--TGSVDQLCWHATNPDLLSTASGD 118 (264)
Q Consensus 55 ~~l~~s~~g~~l~s~s~dg~--------------i~v~~~~~~~~~~~~~~~~~h--~~~v~~i~~~~~~~~~l~s~s~d 118 (264)
..++|+|| +.|+.++.|+. |.+|++.... .....++... ...+..+.|+|++ ++++..+.+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~ 288 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ-SADQPVFATPELPKRGHGASVSSDG-RWVVITSSE 288 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCG-GGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEEC
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCc-hhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEc
Confidence 57889999 99998887664 7888875422 1122334432 2357889999966 455544433
Q ss_pred -----CcEEEEECCCC--C-cceE-----------------EEeecC----CCcEEEEEeccCCCccceEEEecccccee
Q psy9316 119 -----KTVRIWDARTQ--K-SQIM-----------------LASGSF----DKSVAIFALDKKGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 119 -----g~i~vwd~~~~--~-~~~~-----------------~~~~~~----d~~i~i~~~~~~~~~~~~~~~~~h~~~i~ 169 (264)
..+++||+.++ + ...+ ++..+. ++.|.++++..... .....+..+...+.
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~l~~~~~~~l~ 367 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP-RFDTVVPESKDNLE 367 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSC-EEEEEECCCSSEEE
T ss_pred cCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCcc-ccEEEecCCCCeEE
Confidence 37999998765 2 1110 111111 22345555432110 11112233334566
Q ss_pred eEEEcCCCCCEEEEEeCCCcEEEEeCC--CCcceeEee--cCceEEEEEcCCCCEEEEee----CCCeEEEEEccc
Q psy9316 170 QLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQIIAT--KGENINITWAPNGNTIAVGN----KEDLVTFIDVVK 237 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg~i~iwD~~--t~~~~~~~~--~~~~~~v~~sp~g~~la~gs----~d~~i~~~d~~~ 237 (264)
.+.|. +..++++...|+..+||.+. .+....... .+.+..++++|+++.|+... ..+.+++||+.+
T Consensus 368 ~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 368 SVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 67775 45688888889988877443 332222222 34567788999998776432 347799999765
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.60 E-value=6e-06 Score=72.94 Aligned_cols=224 Identities=14% Similarity=0.110 Sum_probs=124.3
Q ss_pred cCCCCCceEeecCCCeeEEEee---------cCceEEeccccc--cccccccC-------CCCEEEEEECCCCCeEEEEE
Q psy9316 9 HTPKSPEYKLLPSGSQFHLVCK---------IDDYVKHFNTHN--DIKEYQAH-------GSKVHSVAWSCDGRRLASGS 70 (264)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~--~~~~~~~h-------~~~V~~l~~s~~g~~l~s~s 70 (264)
.....|...+.|.+..+.+... .++.+..++..+ .+.++..- ......+.|+|||++|+.+.
T Consensus 116 ~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 116 DGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp EECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred ECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence 3344564566666655433321 355677776543 33333211 12345688999999999987
Q ss_pred C--CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc----------------
Q psy9316 71 F--DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ---------------- 132 (264)
Q Consensus 71 ~--dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~---------------- 132 (264)
. ++.|.+.|+....... .+.- ... ....|.+...+++.+.||.+.+.|..+++..
T Consensus 196 ~~~~~~VsVID~~t~kvv~---~I~v--~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~ 268 (426)
T 3c75_H 196 FSPAPAVGVVDLEGKTFDR---MLDV--PDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLIN 268 (426)
T ss_dssp CSSSCEEEEEETTTTEEEE---EEEC--CSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCS
T ss_pred cCCCCeEEEEECCCCeEEE---EEEc--CCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceee
Confidence 4 5789999976532111 1211 001 1223334455556666777666666332211
Q ss_pred --------eEEEeecCCCcEEEEEeccCCCcc-ceEEEe--------ccccceeeEEEcCCCCCEEEEEe---------C
Q psy9316 133 --------IMLASGSFDKSVAIFALDKKGDLN-KEVVYR--------GHTGSVDQLCWHATNPDLLSTAS---------G 186 (264)
Q Consensus 133 --------~~~~~~~~d~~i~i~~~~~~~~~~-~~~~~~--------~h~~~i~~i~~~~~~~~~i~s~~---------~ 186 (264)
..+...+..+.+.+.|........ ...... ........+.++|++..++++.. .
T Consensus 269 ~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp CCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSC
T ss_pred EeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCC
Confidence 011122345566666653221100 000000 00112233678887666666543 2
Q ss_pred CCcEEEEeCCCCcceeE-eecCceEEEEEcCCCC-EEEEee-CCCeEEEEEcccCC
Q psy9316 187 DKTVRIWDARTQKSQII-ATKGENINITWAPNGN-TIAVGN-KEDLVTFIDVVKSL 239 (264)
Q Consensus 187 dg~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~-~la~gs-~d~~i~~~d~~~~~ 239 (264)
++.|.+.|..+.+.... .....+..++|+|||+ .+++.. .++.|.++|+.+..
T Consensus 349 s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 349 SRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 35799999999885333 3344578899999999 887777 59999999987643
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.58 E-value=0.00011 Score=60.29 Aligned_cols=196 Identities=11% Similarity=0.075 Sum_probs=114.4
Q ss_pred ecCceEEeccccccccccc--cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecC
Q psy9316 30 KIDDYVKHFNTHNDIKEYQ--AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107 (264)
Q Consensus 30 ~~d~~~~~~~~~~~~~~~~--~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~ 107 (264)
..++.+..++....++.+. .....+.++.++++|+..++...++.|.+|+. .+.... .........+..+++.++
T Consensus 75 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g~~~~-~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 75 NAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD--DGKIRE-YELPNKGSYPSFITLGSD 151 (299)
T ss_dssp TTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT--TCCEEE-EECSSTTCCEEEEEECTT
T ss_pred CCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC--CCCEEE-ecCCCCCCCCceEEEcCC
Confidence 3356566665443343333 24457899999999988877767788988875 232211 112223456788888875
Q ss_pred CCCeEEEEeCCCcEEEEECCCCCcce--------------------EEEeecCCCcEEEEEeccCCCccceEEEeccccc
Q psy9316 108 NPDLLSTASGDKTVRIWDARTQKSQI--------------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167 (264)
Q Consensus 108 ~~~~l~s~s~dg~i~vwd~~~~~~~~--------------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 167 (264)
+ ++.++...++.|..||. +++... +.++...++.+..++. .+... ......+...
T Consensus 152 g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~~-~~~~~~~~~~ 226 (299)
T 2z2n_A 152 N-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT--SGEIT-EFKIPTPNAR 226 (299)
T ss_dssp S-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT--TCCEE-EEECSSTTCC
T ss_pred C-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC--CCcEE-EEECCCCCCC
Confidence 5 56665556788999987 432211 1111112233444433 22211 1112223456
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee---cCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+..+++.+++ .++++...++.|..||.. ++...... ...+.++++ ++|+.+++.+ .+.+..+|..+
T Consensus 227 ~~~i~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 227 PHAITAGAGI-DLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred ceeEEECCCC-CEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 7889998754 576665578999999984 43222211 235678888 8888777655 56667777543
No 204
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.54 E-value=6.8e-06 Score=69.81 Aligned_cols=176 Identities=10% Similarity=-0.016 Sum_probs=107.7
Q ss_pred CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc
Q psy9316 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~ 131 (264)
.....+.+. +++..++...++.|.++|..+. .. ...+. .......+++++++ .+.++...++.|.+||.++.+.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~-~~--~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF-KE--VGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC-CE--EEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECccc-EE--EEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeE
Confidence 446777774 3344444455789999997642 22 12232 33567888887755 5555444799999999987542
Q ss_pred ce-----------------------EEEeec-CCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC
Q psy9316 132 QI-----------------------MLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187 (264)
Q Consensus 132 ~~-----------------------~~~~~~-~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d 187 (264)
.. ++++.. .++.|.++|........ .... ......+.++|++ .+++++..+
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~---~i~~-g~~p~~i~~~~dG-~l~v~~~~~ 192 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVD---ELTI-GIQPTSLVMDKYN-KMWTITDGG 192 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEE---EEEC-SSCBCCCEECTTS-EEEEEBCCB
T ss_pred EEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEE---EEEc-CCCccceEEcCCC-CEEEEECCC
Confidence 21 122222 35667777654322111 1111 1223567787754 466665544
Q ss_pred ----------CcEEEEeCCCCcceeEe-ec--CceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 188 ----------KTVRIWDARTQKSQIIA-TK--GENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 188 ----------g~i~iwD~~t~~~~~~~-~~--~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
+.|.++|..+.+..... .. ..+..++++|+++.|.++.. .+.+||+.++..
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 78999999987643222 21 25788999999999887765 889999876443
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.51 E-value=0.00018 Score=58.96 Aligned_cols=202 Identities=10% Similarity=0.026 Sum_probs=118.0
Q ss_pred eEEEeecCceEEeccccccccccc--cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeE
Q psy9316 25 FHLVCKIDDYVKHFNTHNDIKEYQ--AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102 (264)
Q Consensus 25 ~~~~~~~d~~~~~~~~~~~~~~~~--~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i 102 (264)
+-+....++.+..++....+..+. .+...+.++.++++++..++...++.|..|+.. +... ..........+..+
T Consensus 33 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~~-~~~~~~~~~~~~~i 109 (300)
T 2qc5_A 33 VWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGFT-EYPLPQPDSGPYGI 109 (300)
T ss_dssp EEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEE-EEECSSTTCCEEEE
T ss_pred EEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCeE-EecCCCCCCCCccc
Confidence 333333456666665443333332 233678999999999877776667888888754 3221 11122233568888
Q ss_pred EEecCCCCeEEEEeCCCcEEEEECCCCCcce--------------------EEEeecCCCcEEEEEeccCCCccceEEEe
Q psy9316 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQI--------------------MLASGSFDKSVAIFALDKKGDLNKEVVYR 162 (264)
Q Consensus 103 ~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~--------------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~ 162 (264)
++.+++ ++.++...++.|..+|.+ ++... +.++...++.|..++. .+.... ....
T Consensus 110 ~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~--~g~~~~-~~~~ 184 (300)
T 2qc5_A 110 TEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN--TGKLEE-YPLP 184 (300)
T ss_dssp EECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT--TCCEEE-EECS
T ss_pred eECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC--CCcEEE-eeCC
Confidence 888744 566665557888888876 32111 1111111223333332 222211 1111
Q ss_pred ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee---cCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 163 ~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.+...+..+++.++ +.++++....+.|.+||. ++....... ...+.+++++++|+.+++...++.|..||..
T Consensus 185 ~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 185 TNAAAPVGITSGND-GALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp STTCCEEEEEECTT-SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCcceEEECCC-CCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 23345778888874 467776666778999998 443322211 2346789999999977777677899999973
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.49 E-value=5.9e-05 Score=65.63 Aligned_cols=224 Identities=15% Similarity=0.120 Sum_probs=125.4
Q ss_pred ecCCCCCceEeecCCCeeEEEee---------cCceEEeccccc--cccccccC-------CCCEEEEEECCCCCeEEEE
Q psy9316 8 FHTPKSPEYKLLPSGSQFHLVCK---------IDDYVKHFNTHN--DIKEYQAH-------GSKVHSVAWSCDGRRLASG 69 (264)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~--~~~~~~~h-------~~~V~~l~~s~~g~~l~s~ 69 (264)
+..-+.|...+.|.+..+..... .++.+..++..+ .+.++.-. ......+.|+|||++|+.+
T Consensus 75 I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 75 IDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFY 154 (386)
T ss_dssp EEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEE
T ss_pred EECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEE
Confidence 33344465677777765433321 256677776543 33333211 1234568999999999988
Q ss_pred EC--CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC-CCcc--------------
Q psy9316 70 SF--DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQ-------------- 132 (264)
Q Consensus 70 s~--dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~-~~~~-------------- 132 (264)
.. ++.|.++|+...... ..+.-. .+ ....|.+.+.+++.+.||.+-+.++.. ++..
T Consensus 155 n~~~~~~VsVID~~t~~vv---~tI~v~--g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~ 227 (386)
T 3sjl_D 155 QFSPAPAVGVVDLEGKAFK---RMLDVP--DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFL 227 (386)
T ss_dssp ECSSSCEEEEEETTTTEEE---EEEECC--SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCB
T ss_pred EcCCCCeEEEEECCCCcEE---EEEECC--Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccc
Confidence 74 689999998653211 112110 01 112344555666677777777777654 2210
Q ss_pred ---e-------EEEeecCCCcEEEEEeccCCC-ccceEE-Ee-------ccccceeeEEEcCCCCCEEEEEeC-------
Q psy9316 133 ---I-------MLASGSFDKSVAIFALDKKGD-LNKEVV-YR-------GHTGSVDQLCWHATNPDLLSTASG------- 186 (264)
Q Consensus 133 ---~-------~~~~~~~d~~i~i~~~~~~~~-~~~~~~-~~-------~h~~~i~~i~~~~~~~~~i~s~~~------- 186 (264)
. .++-.+.++.+.+.+...... ...... +. -....+..+.+++....++++-..
T Consensus 228 ~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 228 INHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp CSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTT
T ss_pred cccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccC
Confidence 0 011233455666666543221 111110 00 011233456777766666655431
Q ss_pred --CCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCC-EEEEe-eCCCeEEEEEcccC
Q psy9316 187 --DKTVRIWDARTQKSQIIA-TKGENINITWAPNGN-TIAVG-NKEDLVTFIDVVKS 238 (264)
Q Consensus 187 --dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~-~la~g-s~d~~i~~~d~~~~ 238 (264)
.+.|-+.|+.+++..... ....+.+++++||++ .|.+. ..++.|.++|+.++
T Consensus 308 ~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 308 TASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 357999999998864333 344677999999997 55554 45899999998754
No 207
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.48 E-value=2.2e-07 Score=80.67 Aligned_cols=166 Identities=14% Similarity=0.089 Sum_probs=86.8
Q ss_pred CCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcce--------
Q psy9316 62 DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------- 133 (264)
Q Consensus 62 ~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~-------- 133 (264)
++..|++++.|+.|..||... ++. .-.++. +.+.+..+.. ++.++++++.||.++.||.++++...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t-G~~--~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT-GSI--KWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT-CCE--EEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCC-CCE--EEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 578999999999999999764 322 112222 3343333333 33567777899999999987654311
Q ss_pred ------------EEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce
Q psy9316 134 ------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 201 (264)
Q Consensus 134 ------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~ 201 (264)
.+++++.++.+..||......... +..+. ...++| ....+++++.|+.|+.||.++++..
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~---~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT---LSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE---ecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEE
Confidence 233445566677776654332221 11111 123445 3456777888999999999988753
Q ss_pred eEeecCceEEEEEcCCC---CEEEEeeCCCeEEEEEcccCCCC
Q psy9316 202 IIATKGENINITWAPNG---NTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 202 ~~~~~~~~~~v~~sp~g---~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
-..........+++++. ..+++++.|+.++.||..++...
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 154 WNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp CEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred EeEecccccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 22211111223334432 56777889999999998765543
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.43 E-value=1.2e-05 Score=75.39 Aligned_cols=178 Identities=12% Similarity=0.134 Sum_probs=105.0
Q ss_pred EEEEECCCCCeEEEEECCCc-------------EEEEEeccCCCCcccEEEec---ccccEEeEEEecCCCCeEEEEeC-
Q psy9316 55 HSVAWSCDGRRLASGSFDKS-------------VAIFALDKKGDLNKEVVYRG---HTGSVDQLCWHATNPDLLSTASG- 117 (264)
Q Consensus 55 ~~l~~s~~g~~l~s~s~dg~-------------i~v~~~~~~~~~~~~~~~~~---h~~~v~~i~~~~~~~~~l~s~s~- 117 (264)
..++|+ |++.|+.++.+.. |.+|++..... ....++.. |...+..+.|+|++..++++.+.
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 467899 9999999988754 88888764321 22234433 33456788999977555555543
Q ss_pred --CCcEEEEECCCCCcce--------------------EEEeecCC---CcEEEEEeccCCCccceEEEeccccceeeEE
Q psy9316 118 --DKTVRIWDARTQKSQI--------------------MLASGSFD---KSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 172 (264)
Q Consensus 118 --dg~i~vwd~~~~~~~~--------------------~~~~~~~d---~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~ 172 (264)
+..++++|+.++.... +++....+ +.|..+++.... ......+..|...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~-~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPG-PAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCC-GGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC-ccccEEEecCCCCEE--E
Confidence 2578999987652111 11222222 234444443221 111123344444443 6
Q ss_pred EcCCCCCEEEEEeCCC--cEEEEeCCCCcceeEeec--CceEEEEEcCCCCEEEEeeCC----CeEEEEEccc
Q psy9316 173 WHATNPDLLSTASGDK--TVRIWDARTQKSQIIATK--GENINITWAPNGNTIAVGNKE----DLVTFIDVVK 237 (264)
Q Consensus 173 ~~~~~~~~i~s~~~dg--~i~iwD~~t~~~~~~~~~--~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~~ 237 (264)
|++.+..++++...++ .|++||+.++.......+ +.+..++++|+++.++....+ +.++.||+.+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 7776555555555565 688999986654333222 345567788999888777656 7899999764
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.42 E-value=3.7e-05 Score=64.34 Aligned_cols=165 Identities=15% Similarity=0.132 Sum_probs=104.2
Q ss_pred cccccccCCCCEEEEEECCCCC-eEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 43 DIKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 43 ~~~~~~~h~~~V~~l~~s~~g~-~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
.++.+...........|+|+++ .+++...++.|..|+.. +.. ..+..+...+..+.+++++ +++++...++.|
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g~~---~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v 109 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--GTV---DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAI 109 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT--SCE---EEEEESCSCEEEEEECTTS-CEEEEETTTTEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC--CCE---EEEeCCCCccceeeECCCC-CEEEEECCCCEE
Confidence 3444555556678899999998 55666678899999752 322 2344556678899998855 555544456788
Q ss_pred EEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEE----EeC-----------
Q psy9316 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST----ASG----------- 186 (264)
Q Consensus 122 ~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s----~~~----------- 186 (264)
.+||.+ ++.. .++.. . . ......++.+.+.|++ .+++| |..
T Consensus 110 ~~~~~~-g~~~-~~~~~-~-----------~---------~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~ 165 (305)
T 3dr2_A 110 TRSDAD-GQAH-LLVGR-Y-----------A---------GKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPE 165 (305)
T ss_dssp EEECTT-SCEE-EEECE-E-----------T---------TEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCS
T ss_pred EEECCC-CCEE-EEEec-c-----------C---------CCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccc
Confidence 888875 3311 11100 0 0 0011245678888754 56665 221
Q ss_pred --CCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCC------CeEEEEEccc
Q psy9316 187 --DKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKE------DLVTFIDVVK 237 (264)
Q Consensus 187 --dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d------~~i~~~d~~~ 237 (264)
.+.|..||..+++............++|+|+|+.|.++... +.|..||+..
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred cCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 35688888876664332233456789999999988777665 7899999864
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.42 E-value=6.5e-05 Score=62.42 Aligned_cols=177 Identities=10% Similarity=0.076 Sum_probs=105.9
Q ss_pred CCEEEEEECCCCCeEEE-------EECCCcEEEEEeccCCCCcccEEEe-----cccccEEeEEEecCCCCeEEEEeCCC
Q psy9316 52 SKVHSVAWSCDGRRLAS-------GSFDKSVAIFALDKKGDLNKEVVYR-----GHTGSVDQLCWHATNPDLLSTASGDK 119 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s-------~s~dg~i~v~~~~~~~~~~~~~~~~-----~h~~~v~~i~~~~~~~~~l~s~s~dg 119 (264)
....+++|+++++.+++ +..++.|.+|+... +... .+. ++...+..+.++++++++++ ++...
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-g~~~---~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~ 92 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-GKKT---VICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRL 92 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-CCEE---EEECCEETTEECCEEEEEECSSSSEEEE-EETTT
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-CcEE---EEEecccCCCCCCCceEEEecCCCcEEE-EECCC
Confidence 35678999999988777 56788999997543 2221 122 24466889999876244444 44444
Q ss_pred cEEEEECCCCCcceE--------------EEeecCCCc-----------------------EEEEEeccCCCccceEEEe
Q psy9316 120 TVRIWDARTQKSQIM--------------LASGSFDKS-----------------------VAIFALDKKGDLNKEVVYR 162 (264)
Q Consensus 120 ~i~vwd~~~~~~~~~--------------~~~~~~d~~-----------------------i~i~~~~~~~~~~~~~~~~ 162 (264)
.|.+||.+ ++.... -+.-..++. ..+|.++..+... ...
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~---~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMI---QVD 168 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEE---EEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEE---Eec
Confidence 78888875 321100 001112222 2333333222211 112
Q ss_pred ccccceeeEEEc----CCCCCEEEEEeCCCcEEEEeCC-CCcc----eeEeec----CceEEEEEcCCCCEEEEeeCCCe
Q psy9316 163 GHTGSVDQLCWH----ATNPDLLSTASGDKTVRIWDAR-TQKS----QIIATK----GENINITWAPNGNTIAVGNKEDL 229 (264)
Q Consensus 163 ~h~~~i~~i~~~----~~~~~~i~s~~~dg~i~iwD~~-t~~~----~~~~~~----~~~~~v~~sp~g~~la~gs~d~~ 229 (264)
.+......++++ |++..++++...++.|.+||.. ++.. ...... ..+..++++++|+.+++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 223345678888 7654456666678999999986 3331 111111 34677999999999988888999
Q ss_pred EEEEEccc
Q psy9316 230 VTFIDVVK 237 (264)
Q Consensus 230 i~~~d~~~ 237 (264)
|..||..+
T Consensus 249 i~~~d~~~ 256 (314)
T 1pjx_A 249 IEVFGPDG 256 (314)
T ss_dssp EEEECTTC
T ss_pred EEEEcCCC
Confidence 99999763
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.41 E-value=0.00014 Score=63.84 Aligned_cols=169 Identities=11% Similarity=0.084 Sum_probs=105.4
Q ss_pred CCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE----EecccccE-E-eEEEecCCCCeEEEEeCCCcEEE
Q psy9316 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV----YRGHTGSV-D-QLCWHATNPDLLSTASGDKTVRI 123 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~----~~~h~~~v-~-~i~~~~~~~~~l~s~s~dg~i~v 123 (264)
....+.+++++|+...|+.+..++.|..|+.+... . ... ..++...- . .++|+|.++.++++-..++.|+.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~--~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-V--TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-E--EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-E--EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 44567889999965566667778889999875321 1 111 11122222 2 89999976677777777889999
Q ss_pred EECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe-CCCcEEEEeCCCCccee
Q psy9316 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIWDARTQKSQI 202 (264)
Q Consensus 124 wd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~-~dg~i~iwD~~t~~~~~ 202 (264)
||.+.. .....+... ..+. ..-.........-..++++|++ .++++-. .++.|+.||+.++....
T Consensus 294 ~~~~g~---~~~~~g~~~---------~~g~-~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 294 ITPDGE---CEWFCGSAT---------QKTV-QDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp ECTTCC---EEEEEECTT---------CCSC-BCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTTEEEE
T ss_pred EecCCC---EEEEEeCCC---------CCCc-CCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCCEEEE
Confidence 987643 112222110 0000 0000000112235678898864 5777777 88999999977766433
Q ss_pred Eeec----------------CceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 203 IATK----------------GENINITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 203 ~~~~----------------~~~~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
.... ..+..++++|+|.++++...++.|+.+++
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3221 34678999999999999999999998875
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.41 E-value=1.5e-05 Score=69.08 Aligned_cols=192 Identities=11% Similarity=-0.008 Sum_probs=108.8
Q ss_pred cccccccccCCCCEEEEEECCCCCeEEEEE----------CCCcEEEEEeccCCCCcccEEEecc-------cccEEeEE
Q psy9316 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGS----------FDKSVAIFALDKKGDLNKEVVYRGH-------TGSVDQLC 103 (264)
Q Consensus 41 ~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s----------~dg~i~v~~~~~~~~~~~~~~~~~h-------~~~v~~i~ 103 (264)
.+.+.++..-..+ .+.++||+++++.+. .++.|.+||..+.... ..+... -.....+.
T Consensus 56 ~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv---~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 56 GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI---ADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE---EEEEETTSCSCCBSCCTTSEE
T ss_pred CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE---EEEECCCccccccCCCcceEE
Confidence 4455555433345 699999999999886 3678999998653321 112211 02345778
Q ss_pred EecCCCCeEEEEeC--CCcEEE--EECCCCC-------------cceEEEeecCCCcEEEEEecc----CCCcc------
Q psy9316 104 WHATNPDLLSTASG--DKTVRI--WDARTQK-------------SQIMLASGSFDKSVAIFALDK----KGDLN------ 156 (264)
Q Consensus 104 ~~~~~~~~l~s~s~--dg~i~v--wd~~~~~-------------~~~~~~~~~~d~~i~i~~~~~----~~~~~------ 156 (264)
++|++. +++.+.. +..+.+ +|+.+-+ ....+++.+.|+.+...++.. .+...
T Consensus 131 ~SpDGk-~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~ 209 (368)
T 1mda_H 131 NCASSA-CLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGA 209 (368)
T ss_dssp ECTTSS-CEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTT
T ss_pred EcCCCC-EEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeee
Confidence 898765 4544543 456888 8885400 001223344566655555543 10000
Q ss_pred ----------------------ceEEE--ecc---------------------ccceeeEEEcCCCCCEEEEEe---C--
Q psy9316 157 ----------------------KEVVY--RGH---------------------TGSVDQLCWHATNPDLLSTAS---G-- 186 (264)
Q Consensus 157 ----------------------~~~~~--~~h---------------------~~~i~~i~~~~~~~~~i~s~~---~-- 186 (264)
....+ ... ..+...+.++|++..++++.. .
T Consensus 210 i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~ 289 (368)
T 1mda_H 210 QNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSC 289 (368)
T ss_dssp SCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCT
T ss_pred eeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcc
Confidence 00000 000 001112667887666666544 2
Q ss_pred ---CCcEEEEeCCCCccee-EeecCceEEEEEcCCCCEE-EEee-CCCeEEEEEcccC
Q psy9316 187 ---DKTVRIWDARTQKSQI-IATKGENINITWAPNGNTI-AVGN-KEDLVTFIDVVKS 238 (264)
Q Consensus 187 ---dg~i~iwD~~t~~~~~-~~~~~~~~~v~~sp~g~~l-a~gs-~d~~i~~~d~~~~ 238 (264)
++.+.++|+.+.+... ......+..++|+|||+.+ ++.. .++.|.++|+.+.
T Consensus 290 ~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 290 LAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp TSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 2356699999987532 2233457889999999855 4444 4899999998753
No 213
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.39 E-value=6.2e-05 Score=68.98 Aligned_cols=215 Identities=16% Similarity=0.225 Sum_probs=130.3
Q ss_pred EeecCCCeeEEEeecCceEEecccc----ccccccccCCCCEEEEEEC----CCCCeEEEEEC-CCcEEEEEeccCCCCc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTH----NDIKEYQAHGSKVHSVAWS----CDGRRLASGSF-DKSVAIFALDKKGDLN 87 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~h~~~V~~l~~s----~~g~~l~s~s~-dg~i~v~~~~~~~~~~ 87 (264)
.+.|.+. +..+++.|+.+..++.. +.+.++.. ......++|+ |||++++++.. ++++.++|..+....
T Consensus 203 ~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~- 279 (567)
T 1qks_A 203 RLSASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK- 279 (567)
T ss_dssp EECTTSC-EEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE-
T ss_pred EECCCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE-
Confidence 4555554 44566778888887653 33344433 3346789999 69999998765 589999986542211
Q ss_pred ccEEEe--c--------ccc-cEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc---------------------ceEE
Q psy9316 88 KEVVYR--G--------HTG-SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS---------------------QIML 135 (264)
Q Consensus 88 ~~~~~~--~--------h~~-~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~---------------------~~~~ 135 (264)
..+. + |.. .+..+..++.++.++++...+|.|.++|....+. ..++
T Consensus 280 --~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~ 357 (567)
T 1qks_A 280 --KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFI 357 (567)
T ss_dssp --EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEE
T ss_pred --EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEE
Confidence 1111 1 212 4667777776666777777789999998764321 1234
Q ss_pred EeecCCCcEEEEEeccCCCccceEEE---eccccceeeEEEcCCCCCEEEEEe-CCCcEEEEeCCCCc-------c-eeE
Q psy9316 136 ASGSFDKSVAIFALDKKGDLNKEVVY---RGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIWDARTQK-------S-QII 203 (264)
Q Consensus 136 ~~~~~d~~i~i~~~~~~~~~~~~~~~---~~h~~~i~~i~~~~~~~~~i~s~~-~dg~i~iwD~~t~~-------~-~~~ 203 (264)
++...++.|.++|..... +...... .-|..+.-.+ ++|..+.++++.. .++.|.++|..+.. . ...
T Consensus 358 va~~~sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 358 TAANARNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEGGGTEEEEEETTTTE-EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEeCCCCeEEEEECCCCc-EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 555567788888876432 2111111 1233221112 4665555666654 56899999998722 1 112
Q ss_pred eec-CceEEEEEcCCCCEEEEeeC-------CCeEEEEEcccC
Q psy9316 204 ATK-GENINITWAPNGNTIAVGNK-------EDLVTFIDVVKS 238 (264)
Q Consensus 204 ~~~-~~~~~v~~sp~g~~la~gs~-------d~~i~~~d~~~~ 238 (264)
... .....+..+|++++|.+... ++.|.++|+.+.
T Consensus 436 ~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 436 PALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp ECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred ecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 222 22355889999999988763 458999998865
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.39 E-value=0.00041 Score=56.82 Aligned_cols=194 Identities=10% Similarity=0.078 Sum_probs=111.5
Q ss_pred cCceEEecccccccccccc--CCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCC
Q psy9316 31 IDDYVKHFNTHNDIKEYQA--HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108 (264)
Q Consensus 31 ~d~~~~~~~~~~~~~~~~~--h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 108 (264)
.++.+..++.......+.. ....+.+++++++|+..++...++.|..++.+ +... ..........+..+++.+++
T Consensus 81 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~-~~~~~~~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 81 GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIY-EYDLPNKGSYPAFITLGSDN 157 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEE-EEECSSTTCCEEEEEECTTS
T ss_pred CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEE-EccCCCCCCCceeEEECCCC
Confidence 3555666654433333322 34678999999999887776667888888653 3222 11122234567888888755
Q ss_pred CCeEEEEeCCCcEEEEECCCCCcce----------EEEeecCCCc----------EEEEEeccCCCccceEEEeccccce
Q psy9316 109 PDLLSTASGDKTVRIWDARTQKSQI----------MLASGSFDKS----------VAIFALDKKGDLNKEVVYRGHTGSV 168 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~~~~----------~~~~~~~d~~----------i~i~~~~~~~~~~~~~~~~~h~~~i 168 (264)
++.++...++.|..+|.. ++... .-+.-..++. |..++. .+.... .....+...+
T Consensus 158 -~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~--~g~~~~-~~~~~~~~~~ 232 (300)
T 2qc5_A 158 -ALWFTENQNNSIGRITNT-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT--TGEISE-YDIPTPNARP 232 (300)
T ss_dssp -SEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT--TCCEEE-EECSSTTCCE
T ss_pred -CEEEEecCCCeEEEECCC-CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC--CCcEEE-EECCCCCCCc
Confidence 466555557888888873 22111 0011112333 333332 222111 1112234457
Q ss_pred eeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee---cCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 169 DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 169 ~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
..+++.+.+ .++++...++.|..||.. +....... ...+.+++++++|+.+++.. + .|..+|..
T Consensus 233 ~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 233 HAITAGKNS-EIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred eEEEECCCC-CEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 788888754 576666667999999984 43322212 23467899999999776665 5 77777753
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.36 E-value=0.00043 Score=58.46 Aligned_cols=203 Identities=13% Similarity=0.121 Sum_probs=109.6
Q ss_pred EeecCCCeeEEEeecCceEEeccccc-cccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe-c
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHN-DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR-G 94 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~-~ 94 (264)
.+.|.+..+..+...++.+..|+... ..+.+ .....+.++.|+++|+++++. .+ .|.+|+... +......... .
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~-g~~~~~~~~~~~ 130 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRKTVH-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTAT-GVLTLHAELESD 130 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTT-CCEEEEECSSTT
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCC-CcEEEEeeCCCC
Confidence 34554444444444456666665432 22333 234679999999999877754 44 488887643 2221110000 0
Q ss_pred -ccccEEeEEEecCCCCeEEEEeC------CCcEEEEECCCCCcc-------------------eEEEeecCCCcEEEEE
Q psy9316 95 -HTGSVDQLCWHATNPDLLSTASG------DKTVRIWDARTQKSQ-------------------IMLASGSFDKSVAIFA 148 (264)
Q Consensus 95 -h~~~v~~i~~~~~~~~~l~s~s~------dg~i~vwd~~~~~~~-------------------~~~~~~~~d~~i~i~~ 148 (264)
....+.++.++|++ ++.++... .+.|..+| .++.. .++++...++.|.+|+
T Consensus 131 ~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp CTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 12357889999865 45544332 24455555 22211 1223333455677777
Q ss_pred ec-cCC-CccceEEE---eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeec-CceEEEEEc-CCCCEE
Q psy9316 149 LD-KKG-DLNKEVVY---RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATK-GENINITWA-PNGNTI 221 (264)
Q Consensus 149 ~~-~~~-~~~~~~~~---~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~-~~~~~v~~s-p~g~~l 221 (264)
.+ ..+ .......+ .........+++.+++ .++++...++.|..||...+........ ..+.+++|+ |+++.|
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEE
T ss_pred cccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEE
Confidence 64 222 22111111 1223345678887654 5766666678999999854332222222 357889998 898877
Q ss_pred EEeeCC
Q psy9316 222 AVGNKE 227 (264)
Q Consensus 222 a~gs~d 227 (264)
.+++..
T Consensus 287 ~vt~~~ 292 (326)
T 2ghs_A 287 LVTSAR 292 (326)
T ss_dssp EEEEBC
T ss_pred EEEecC
Confidence 555443
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.27 E-value=3.2e-05 Score=72.50 Aligned_cols=161 Identities=14% Similarity=0.150 Sum_probs=91.7
Q ss_pred cCCCCEEEEEECCCCCeEEEEE-----CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCc---
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGS-----FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT--- 120 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s-----~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~--- 120 (264)
+|...+..++|||||++|+-+. .+.+|+++|+.... ... ..+. ......++|+ ++ +.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~-~~~-~~~~--~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ-PLE-TPLK--DVKFSGISWL-GN-EGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS-EEE-EEEE--EEESCCCEEE-TT-TEEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC-CCc-cccC--CceeccEEEe-CC-CEEEEEEecCcccc
Confidence 3555788999999999988543 23469999987532 111 1111 1112467898 55 45555665532
Q ss_pred ----------EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEec-cccceeeEEEcCCCCCEEEEEeC---
Q psy9316 121 ----------VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASG--- 186 (264)
Q Consensus 121 ----------i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~-h~~~i~~i~~~~~~~~~i~s~~~--- 186 (264)
|++|++.+......+ ++ .... |...+..+.|+|++..++++.+.
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~----------v~------------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 257 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRL----------VF------------GAIPAQHHRYVGATVTEDDRFLLISAANSTS 257 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEE----------EE------------SCSGGGCCSEEEEEECTTSCEEEEEEESSSS
T ss_pred cccccCCCcEEEEEECCCCcccceE----------EE------------ecCCCCCeEEEEEEEcCCCCEEEEEEccCCC
Confidence 556665443221110 01 0112 33345678899876656555543
Q ss_pred CCcEEEEeCCCCc--ceeEeec-CceEEEEEcCCCCEEEEeeCC----CeEEEEEcccC
Q psy9316 187 DKTVRIWDARTQK--SQIIATK-GENINITWAPNGNTIAVGNKE----DLVTFIDVVKS 238 (264)
Q Consensus 187 dg~i~iwD~~t~~--~~~~~~~-~~~~~v~~sp~g~~la~gs~d----~~i~~~d~~~~ 238 (264)
.+.|+++|+.+.. ....... ...... |+++|..|+..+.. ..|..+|+.++
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 3589999998764 2222222 223333 77888877665543 56889998764
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.25 E-value=0.00061 Score=56.63 Aligned_cols=175 Identities=11% Similarity=0.060 Sum_probs=106.8
Q ss_pred CEEEEEECCCCC-eEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCc
Q psy9316 53 KVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131 (264)
Q Consensus 53 ~V~~l~~s~~g~-~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~ 131 (264)
-..+..|+++.. .+++...++.|..|+... +.. ..+ .....+.++++++++ ++++ +. +..|.+||.++++.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~-~~~---~~~-~~~~~~~~i~~~~dG-~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFT-KQV---QRV-TMDAPVSSVALRQSG-GYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCE---EEE-ECSSCEEEEEEBTTS-SEEE-EE-TTEEEEEETTTTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCC-CcE---EEE-eCCCceEEEEECCCC-CEEE-EE-CCeEEEEECCCCcE
Confidence 456788999655 555555678999998753 221 122 234678899999866 4544 34 56788999876542
Q ss_pred ceEE-------------EeecCCCcEE-------------------EEEeccCCCccceEEEeccccceeeEEEcCCCCC
Q psy9316 132 QIML-------------ASGSFDKSVA-------------------IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD 179 (264)
Q Consensus 132 ~~~~-------------~~~~~d~~i~-------------------i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 179 (264)
..+. +..+.+|.+. +|.++..+... ....+....+.++|+|++..
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK---KYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE---EEEEEESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE---EEeeccccccceEEcCCCCE
Confidence 2111 1112334333 33332222111 11122234567999997666
Q ss_pred EEEEEeCCCcEEEEeC--CCCcce---eEe----ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 180 LLSTASGDKTVRIWDA--RTQKSQ---IIA----TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 180 ~i~s~~~dg~i~iwD~--~t~~~~---~~~----~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
++++.+.++.|.+||+ .++... ... ..+.+..++++++|+++++...++.|..||..++
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 6677777899999987 444321 111 1234678999999998888888899999997643
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=6.3e-05 Score=64.16 Aligned_cols=162 Identities=10% Similarity=0.023 Sum_probs=97.0
Q ss_pred CCEEEEEECCCCCeEEEEE--CCCcEEEEEeccCCCCccc----EEEecccccEEeEEEecCCCCeEEEEeC-----CCc
Q psy9316 52 SKVHSVAWSCDGRRLASGS--FDKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASG-----DKT 120 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s--~dg~i~v~~~~~~~~~~~~----~~~~~h~~~v~~i~~~~~~~~~l~s~s~-----dg~ 120 (264)
..+..++++++|+.+++.. .++.+++|.++ .+..... .....+-..+..+++++++ ++.++-+. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCe
Confidence 6789999999999888864 23435666665 2321100 0011345678999998764 44444332 578
Q ss_pred EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe---CCCcEEEEeCCC
Q psy9316 121 VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS---GDKTVRIWDART 197 (264)
Q Consensus 121 i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~---~dg~i~iwD~~t 197 (264)
|.+||+++++... .+.+... . ..+....+.+++++.++.++++.. .++.|.+||+.+
T Consensus 95 i~~~d~~tg~~~~------------~~~~~~~--~------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 95 LVAWDTLNNQLSR------------VIYLPPP--I------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp EEEEETTTTEEEE------------EEECCTT--T------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred EEEEECCCCeEEE------------EEECChh--h------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 8999987654221 1221100 0 012234577888875555666665 688999999986
Q ss_pred CcceeEee-------------------------------cCceEEEEEcCCCCEEEEeeCCC-eEEEEEc
Q psy9316 198 QKSQIIAT-------------------------------KGENINITWAPNGNTIAVGNKED-LVTFIDV 235 (264)
Q Consensus 198 ~~~~~~~~-------------------------------~~~~~~v~~sp~g~~la~gs~d~-~i~~~d~ 235 (264)
++...... ...+..++|+|+|+.|.++..++ .++.++.
T Consensus 155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 64321110 01246799999999888876655 6666654
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.20 E-value=0.0017 Score=56.17 Aligned_cols=197 Identities=10% Similarity=-0.070 Sum_probs=105.5
Q ss_pred eEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEE----------CCCcEEEEEeccCCCCcccEEEe--cc---c
Q psy9316 34 YVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGS----------FDKSVAIFALDKKGDLNKEVVYR--GH---T 96 (264)
Q Consensus 34 ~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s----------~dg~i~v~~~~~~~~~~~~~~~~--~h---~ 96 (264)
.+..++. .+.+.++..-..+ .+.++|||++|+.+. .++.|.+||......... .... .+ .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~-i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIAD-IELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEE-EECCCccccccC
Confidence 4444443 3444444332233 899999999999886 367899998754221111 1010 00 1
Q ss_pred ccEEeEEEecCCCCeEEEEeC--CCcEEEEECCCCCcceE-E----------------EeecCCCcEEEEEeccCCCccc
Q psy9316 97 GSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKSQIM-L----------------ASGSFDKSVAIFALDKKGDLNK 157 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~~~~~~~~~-~----------------~~~~~d~~i~i~~~~~~~~~~~ 157 (264)
.....+.|+|++ ++++.++. ++.|.++| .+++.... + ++.+.|+.+..++. .......
T Consensus 125 ~~p~~~~~spDG-~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~ 201 (373)
T 2mad_H 125 PYSWMNANTPNN-ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA 201 (373)
T ss_pred CCccceEECCCC-CEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE
Confidence 224477899966 45555553 57899999 87654322 2 22335666666665 2221100
Q ss_pred eEE--Eeccccce-eeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--------------ecCceEEEEEcCCCCE
Q psy9316 158 EVV--YRGHTGSV-DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--------------TKGENINITWAPNGNT 220 (264)
Q Consensus 158 ~~~--~~~h~~~i-~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--------------~~~~~~~v~~sp~g~~ 220 (264)
... ......++ ....+.+.+..+++. +..+.+.+.|+.+....... .+....-++++|+++.
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ 280 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDG 280 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCE
Confidence 000 00001111 112334444444443 36789999999765422111 0112233788999998
Q ss_pred EEEeeC----------CCeEEEEEccc
Q psy9316 221 IAVGNK----------EDLVTFIDVVK 237 (264)
Q Consensus 221 la~gs~----------d~~i~~~d~~~ 237 (264)
+.++.. ++.|.++|+.+
T Consensus 281 lyV~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 281 IYLLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred EEEEeccCCcccccCCCCeEEEEECCC
Confidence 877653 35799999764
No 220
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.20 E-value=0.0014 Score=54.09 Aligned_cols=177 Identities=11% Similarity=0.056 Sum_probs=108.6
Q ss_pred CceEeecCCCeeEEEeecCceEEeccc-cccccccccC-CCCEEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccE
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNT-HNDIKEYQAH-GSKVHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEV 90 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~h-~~~V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~ 90 (264)
....++|.|. +.+ +.++.+..++. ++.+.++..+ ...+.++.+.++|+.+++.+. ++.+..++ ..+......
T Consensus 40 ~~~~~~pdG~-ilv--s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd--~~Gk~l~~~ 114 (276)
T 3no2_A 40 NSVAATKAGE-ILF--SYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVN--MKGEVLSKT 114 (276)
T ss_dssp CEEEECTTSC-EEE--ECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC--TTSCEEEEE
T ss_pred cCeEECCCCC-EEE--eCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEe--CCCCEEEEE
Confidence 3446667663 333 44666666654 4555566654 347889999999999999876 55555554 334322111
Q ss_pred EEe----cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEecccc
Q psy9316 91 VYR----GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166 (264)
Q Consensus 91 ~~~----~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~ 166 (264)
.+. .+......+...+ +++++++...++.|..||.+ ++. +|..... .
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~--------------~w~~~~~-------------~ 165 (276)
T 3no2_A 115 EFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQL--------------LNSVKLS-------------G 165 (276)
T ss_dssp EECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCE--------------EEEEECS-------------S
T ss_pred eccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCE--------------EEEEECC-------------C
Confidence 111 1222334445565 44788888889999999987 553 2332211 1
Q ss_pred ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeec--------CceEEEEEcCCCCEEEEee
Q psy9316 167 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATK--------GENINITWAPNGNTIAVGN 225 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~--------~~~~~v~~sp~g~~la~gs 225 (264)
....+...+ ++.++++++.++.|..+|..+++..-.... ..+..+...++|+.+++..
T Consensus 166 ~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 166 TPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 122344445 456777778888999999998875333321 1256778889999998875
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.18 E-value=0.00014 Score=61.97 Aligned_cols=178 Identities=10% Similarity=0.018 Sum_probs=99.1
Q ss_pred cCCCCEEEEEECCCCCeEEEEEC-----CCcEEEEEeccCCCCcccEEEe----cccccEEeEEEecCCCCeEEEEe---
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSF-----DKSVAIFALDKKGDLNKEVVYR----GHTGSVDQLCWHATNPDLLSTAS--- 116 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~-----dg~i~v~~~~~~~~~~~~~~~~----~h~~~v~~i~~~~~~~~~l~s~s--- 116 (264)
.|-..+..++++++++..++-.. +..|.+||+.. +.......+. .+...+..+.+++.++...++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t-g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN-NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT-TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC-CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 34567999999999876555432 57899998754 2211111111 12234678888876555555555
Q ss_pred CCCcEEEEECCCCCcceEEEee--c--CC-CcE-----EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC
Q psy9316 117 GDKTVRIWDARTQKSQIMLASG--S--FD-KSV-----AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 186 (264)
Q Consensus 117 ~dg~i~vwd~~~~~~~~~~~~~--~--~d-~~i-----~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~ 186 (264)
.++.|.+||+.+++....+ .+ + .+ ..+ .++.....+.. ..-...++.|+|+|++ ..+..+..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~------~~~~~~~~gia~s~dg-~~ly~~~~ 214 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVL-QGYPGIAPEDIDLVIDGVPVQIGQPDGTV------IRPHLGVNGIVLDAEN-EWLYLSPM 214 (343)
T ss_dssp GGCEEEEEETTTCCEEEEC-TTCTTTSCCSCCCEETTEECBEECTTSCE------ECCCCCEEEEEECTTS-CEEEEEES
T ss_pred CCCeEEEEECCCCCEEEEe-cCCCcccccccceeECCEEEEeccCCCce------eceecccceeEeccCC-CEEEEEeC
Confidence 6789999999866532211 11 0 00 000 00000000000 0011246789999865 44444454
Q ss_pred CC-cEEEEeCC---CCc---------ceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 187 DK-TVRIWDAR---TQK---------SQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 187 dg-~i~iwD~~---t~~---------~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
++ .+..+|.. ... .......+.+..++++++|+.+++...++.|..||.
T Consensus 215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 215 HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 44 55555432 110 011112334557999999999999999999999997
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.04 E-value=0.00054 Score=59.56 Aligned_cols=199 Identities=11% Similarity=-0.015 Sum_probs=115.9
Q ss_pred CceEEeccc--cccccccccCCCCEEEEEECCCCCeEEEEE----------CCCcEEEEEeccCCCCcccEEEec--c--
Q psy9316 32 DDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGS----------FDKSVAIFALDKKGDLNKEVVYRG--H-- 95 (264)
Q Consensus 32 d~~~~~~~~--~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s----------~dg~i~v~~~~~~~~~~~~~~~~~--h-- 95 (264)
++.+..++. .+.+.++..-..+ . +.++|||++++.+. .++.|.+||..+.... ....... +
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~-~~I~v~~g~r~~ 134 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT-ADIELPDAPRFL 134 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE-EEEEETTCCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE-EEEECCCccccc
Confidence 456666654 3444455433334 4 99999999998875 3578999997653221 1111110 0
Q ss_pred -cccEEeEEEecCCCCeEEEEeC--CCcEEEEECCCCCcce----------------EEEeecCCCcEEEEEeccCCCcc
Q psy9316 96 -TGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKSQI----------------MLASGSFDKSVAIFALDKKGDLN 156 (264)
Q Consensus 96 -~~~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~~~~~~~~----------------~~~~~~~d~~i~i~~~~~~~~~~ 156 (264)
......+.++|++ +++..+.. ++.|.++|+.+.+... .+++.+.||.+.+.++...+...
T Consensus 135 ~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 135 VGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 213 (386)
T ss_dssp BSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred cCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEE
Confidence 1134567889876 45555553 6899999998875322 23456678888888876533331
Q ss_pred ceEEEeccc----ccee-eEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--e------------ecCceEEEEEcCC
Q psy9316 157 KEVVYRGHT----GSVD-QLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--A------------TKGENINITWAPN 217 (264)
Q Consensus 157 ~~~~~~~h~----~~i~-~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~------------~~~~~~~v~~sp~ 217 (264)
. ....+. .++. ...|.+.++.++. .+.+|.+++.|+.+...... . .++....++++|+
T Consensus 214 ~--~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 214 I--THTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp E--EECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred E--eecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 1 111111 1221 1344333444433 45689999999987643211 0 0122234778999
Q ss_pred CCEEEEeeC----------CCeEEEEEccc
Q psy9316 218 GNTIAVGNK----------EDLVTFIDVVK 237 (264)
Q Consensus 218 g~~la~gs~----------d~~i~~~d~~~ 237 (264)
++.+.+... .+.|.++|+.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t 320 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKT 320 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCC
Confidence 998877653 35789999765
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.97 E-value=0.0024 Score=53.86 Aligned_cols=171 Identities=12% Similarity=0.068 Sum_probs=100.8
Q ss_pred EEEEEECCCCCe-EEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc
Q psy9316 54 VHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132 (264)
Q Consensus 54 V~~l~~s~~g~~-l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 132 (264)
.....|+|+++. +++...++.|..|+... +.. ..+. ....+.++.|.+++ ++++ ++.++ |.+||.++++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~-~~~---~~~~-~~~~v~~i~~~~dg-~l~v-~~~~g-l~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLAS-GRK---TVHA-LPFMGSALAKISDS-KQLI-ASDDG-LFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTT-TEE---EEEE-CSSCEEEEEEEETT-EEEE-EETTE-EEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCC-CcE---EEEE-CCCcceEEEEeCCC-eEEE-EECCC-EEEEECCCCcEE
Confidence 467889997554 45555678899998653 211 1222 34568899998865 4554 44444 888998765421
Q ss_pred eEE-------------EeecCCCcE--------------EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe
Q psy9316 133 IML-------------ASGSFDKSV--------------AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185 (264)
Q Consensus 133 ~~~-------------~~~~~d~~i--------------~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~ 185 (264)
.+. +..+.+|.+ .||.++ .+... .+..+....+.++|+|++..++++.+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~---~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVT---KLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEE---EEEEEESSEEEEEECTTSCEEEEEET
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEE---EeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 110 111223332 233332 11111 11122234567899987655666666
Q ss_pred CCCcEEEEeCC--CC-cc---eeEe-e---cCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 186 GDKTVRIWDAR--TQ-KS---QIIA-T---KGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 186 ~dg~i~iwD~~--t~-~~---~~~~-~---~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.++.|.+||+. ++ .. .... . ...+..++++++|+++++...++.|..||..
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 78899999986 54 31 1111 1 2345678999999988877777889999873
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.85 E-value=0.0032 Score=55.65 Aligned_cols=166 Identities=17% Similarity=0.192 Sum_probs=95.2
Q ss_pred EEEEEECCCCCeEEEEECC------CcEEEEEeccCCCCcccEEEe--ccc-ccEEeEEEecCCCCeEEEEe--------
Q psy9316 54 VHSVAWSCDGRRLASGSFD------KSVAIFALDKKGDLNKEVVYR--GHT-GSVDQLCWHATNPDLLSTAS-------- 116 (264)
Q Consensus 54 V~~l~~s~~g~~l~s~s~d------g~i~v~~~~~~~~~~~~~~~~--~h~-~~v~~i~~~~~~~~~l~s~s-------- 116 (264)
-..+...|+| .++++..+ +.|.++|..+.. .. ..+. ... ..-.++-|+|.. +.++++.
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~-v~--~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE-PL--GKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC-EE--EECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHT
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe-EE--EEEccCCCCccccceEEECCCC-CEEEEccCcCccccc
Confidence 4456778999 66665444 678888765321 11 1222 111 223456778855 5676664
Q ss_pred -----------CCCcEEEEECCCCCcceEE------------------------Eeec-----CCCcEEEEEeccCCCcc
Q psy9316 117 -----------GDKTVRIWDARTQKSQIML------------------------ASGS-----FDKSVAIFALDKKGDLN 156 (264)
Q Consensus 117 -----------~dg~i~vwd~~~~~~~~~~------------------------~~~~-----~d~~i~i~~~~~~~~~~ 156 (264)
.+.+|.+||+.+++....+ ++.. .+++|.+|..+. +.+.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~ 293 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWN 293 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-Ccee
Confidence 3789999999875422222 1222 334444443322 2111
Q ss_pred ceEEE--ecc----------------ccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC-ccee--EeecC--------
Q psy9316 157 KEVVY--RGH----------------TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ-KSQI--IATKG-------- 207 (264)
Q Consensus 157 ~~~~~--~~h----------------~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~-~~~~--~~~~~-------- 207 (264)
..... ... ......|.++|++..+.+|.-..+.|.+||+... ...+ ....+
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~ 373 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADH 373 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCC
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccc
Confidence 11110 000 1245678899988777888888999999998632 2211 11122
Q ss_pred --------ceEEEEEcCCCCEEEEee
Q psy9316 208 --------ENINITWAPNGNTIAVGN 225 (264)
Q Consensus 208 --------~~~~v~~sp~g~~la~gs 225 (264)
....++++|||++|.++.
T Consensus 374 ~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 374 PAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccCCCCCCEEEEcCCCCEEEEEc
Confidence 256799999999999888
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.82 E-value=0.0079 Score=49.45 Aligned_cols=179 Identities=11% Similarity=0.008 Sum_probs=104.0
Q ss_pred CEEEEEECCCCCeEEEEEC--CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 53 KVHSVAWSCDGRRLASGSF--DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~s~--dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
....|.|++++...++.+. ++.|.++|+.+. .......+..+ .....+.+. ++++.++.-.++.+.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-~v~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-KVENIHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-CEEEEEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-CEEEEEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 4689999998654444443 578999998753 22221112121 223345554 44455555568999999998754
Q ss_pred cceEEEee-----------------cCCCcEEEEEeccCCCccceEEEecc---ccceeeEEEcCCCCCEEEEEeCCCcE
Q psy9316 131 SQIMLASG-----------------SFDKSVAIFALDKKGDLNKEVVYRGH---TGSVDQLCWHATNPDLLSTASGDKTV 190 (264)
Q Consensus 131 ~~~~~~~~-----------------~~d~~i~i~~~~~~~~~~~~~~~~~h---~~~i~~i~~~~~~~~~i~s~~~dg~i 190 (264)
....+..+ ..++.+.++|......... ...... ....+.+.|. ++.++++.-.++.|
T Consensus 98 v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~-I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 98 NIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKK-HNVKYNGHRVIRLNELEYI--NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEE-EECEETTEECCCEEEEEEE--TTEEEEEETTSSEE
T ss_pred EEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEE-EEECCCCcccccceeEEEE--CCEEEEecCCCCeE
Confidence 33222211 1233444444322111111 111111 1135667776 34666766678999
Q ss_pred EEEeCCCCcceeEe-ec--------------CceEEEEEcCCCC-EEEEeeCCCeEEEEEcccC
Q psy9316 191 RIWDARTQKSQIIA-TK--------------GENINITWAPNGN-TIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 191 ~iwD~~t~~~~~~~-~~--------------~~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~~ 238 (264)
.+-|..+++..... .. .....++|+|+++ .++++...+.++..++.+.
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999998753222 11 1347899999986 4567778999999998864
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.80 E-value=0.0092 Score=48.41 Aligned_cols=157 Identities=11% Similarity=0.113 Sum_probs=95.9
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
..+..++|+++++.|+.+. .++.|.+++.+.. .. . ............+++++.++.+.++-...+.|.++|++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~-~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-EP-T-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC-CC-E-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC-Cc-E-EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 3568999999877776655 4678999987532 11 1 22222224567888888665566555567788888876422
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC--CCcEEEEeCCCCcceeEee--c
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKSQIIAT--K 206 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~--dg~i~iwD~~t~~~~~~~~--~ 206 (264)
.. .+.. .....-..++++|.++.++++... .+.|..+++.......... .
T Consensus 113 ~~-~~~~-------------------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~ 166 (267)
T 1npe_A 113 RR-VLFD-------------------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL 166 (267)
T ss_dssp CE-EEEC-------------------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC
T ss_pred EE-EEEE-------------------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC
Confidence 11 1100 001223567888765556555443 4688888887544332221 2
Q ss_pred CceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 207 GENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 207 ~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
..+..++++|++..| ++-...+.|..+|...
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 346789999987655 5555678899999753
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.67 E-value=0.0052 Score=50.32 Aligned_cols=173 Identities=11% Similarity=0.160 Sum_probs=96.0
Q ss_pred ccccccCC--CCEEEEEECCCCCeEEEEECCC--cEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC
Q psy9316 44 IKEYQAHG--SKVHSVAWSCDGRRLASGSFDK--SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119 (264)
Q Consensus 44 ~~~~~~h~--~~V~~l~~s~~g~~l~s~s~dg--~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg 119 (264)
+++| .|. .....|.|+ ++....+.+.+| .|+++|+.+. +......+.. ......+... ++++....-.++
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg-kv~~~~~l~~-~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG-KTLQQIELGK-RYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC-CEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCC-cEEEEEecCC-ccceeEEEEe--CCEEEEEEeeCC
Confidence 4445 444 345788998 676666777776 8999988653 3222111211 1112334443 444555555689
Q ss_pred cEEEEECCCCCcceE-----------------EEeecCCCcEEEEEeccCCCccceEE-Eeccc-cceeeEEEcCCCCCE
Q psy9316 120 TVRIWDARTQKSQIM-----------------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHT-GSVDQLCWHATNPDL 180 (264)
Q Consensus 120 ~i~vwd~~~~~~~~~-----------------~~~~~~d~~i~i~~~~~~~~~~~~~~-~~~h~-~~i~~i~~~~~~~~~ 180 (264)
.+.+||.++.+.... +++ ..+..|.++|............ ..+.. ..++.+.|. ++.+
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~l 184 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEI 184 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCEEECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred EEEEEECccCcEEEEEECCCCceEEecCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEE
Confidence 999999987653322 222 2234455554332221111111 11111 335567775 4567
Q ss_pred EEEEeCCCcEEEEeCCCCcceeEeec--------------CceEEEEEcCCCCEEEEee
Q psy9316 181 LSTASGDKTVRIWDARTQKSQIIATK--------------GENINITWAPNGNTIAVGN 225 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t~~~~~~~~~--------------~~~~~v~~sp~g~~la~gs 225 (264)
++..-.++.|.+.|.++++....... ...+.|+|+|+++.|.+.+
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 77666788999999999885322111 1246799999887765555
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.65 E-value=0.0049 Score=54.46 Aligned_cols=176 Identities=10% Similarity=0.028 Sum_probs=99.4
Q ss_pred EC--CCCCeEEEE-ECCCcEEEEEeccCCC-CcccEEEe------cc-cccEEeEEEecCCCCeEEEEeCC------CcE
Q psy9316 59 WS--CDGRRLASG-SFDKSVAIFALDKKGD-LNKEVVYR------GH-TGSVDQLCWHATNPDLLSTASGD------KTV 121 (264)
Q Consensus 59 ~s--~~g~~l~s~-s~dg~i~v~~~~~~~~-~~~~~~~~------~h-~~~v~~i~~~~~~~~~l~s~s~d------g~i 121 (264)
++ +++++|+.. ..++.|.++|+..... .....+++ .. ...-..+...|++ ++++...+ |.+
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeE
Confidence 36 788887765 4678899999864322 22222221 00 1123445566755 66655555 789
Q ss_pred EEEECCCCCcc----------------------eEEEee-------------------cCCCcEEEEEeccCCCccceEE
Q psy9316 122 RIWDARTQKSQ----------------------IMLASG-------------------SFDKSVAIFALDKKGDLNKEVV 160 (264)
Q Consensus 122 ~vwd~~~~~~~----------------------~~~~~~-------------------~~d~~i~i~~~~~~~~~~~~~~ 160 (264)
.++|.++.+.. ..+++. .++..|.+|++... .......
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~~tI~ 245 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRIHSLT 245 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEeeEEe
Confidence 99998764311 123333 24678999998653 2111111
Q ss_pred EeccccceeeEEE--cCCCCCEEEEEe-----CCCcEEEEeCCCCcceeEe-----e-----------------cCceEE
Q psy9316 161 YRGHTGSVDQLCW--HATNPDLLSTAS-----GDKTVRIWDARTQKSQIIA-----T-----------------KGENIN 211 (264)
Q Consensus 161 ~~~h~~~i~~i~~--~~~~~~~i~s~~-----~dg~i~iwD~~t~~~~~~~-----~-----------------~~~~~~ 211 (264)
.......-..+.| +|++...++++- .+++|.+|....+...... . ...+..
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 1101112223444 887665566655 7788887655443211100 0 123457
Q ss_pred EEEcCCCCEEEEee-CCCeEEEEEccc
Q psy9316 212 ITWAPNGNTIAVGN-KEDLVTFIDVVK 237 (264)
Q Consensus 212 v~~sp~g~~la~gs-~d~~i~~~d~~~ 237 (264)
|.+||||++|.++. ..+.|.+||+.+
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 89999999986664 478999999864
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.59 E-value=2.7e-05 Score=67.38 Aligned_cols=126 Identities=15% Similarity=0.095 Sum_probs=64.6
Q ss_pred CCeEEEEeCCCcEEEEECCCCCcce-----------------EEEeecCCCcEEEEEeccCCCccceEEEecccc-ceee
Q psy9316 109 PDLLSTASGDKTVRIWDARTQKSQI-----------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG-SVDQ 170 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~~~~-----------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~-~i~~ 170 (264)
+..+++++.||.++.||.++++... .++.++.|+.+..|+......... +..+.. .+..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK---LPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEE---CSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee---eeccCcccccc
Confidence 3577888999999999988765321 345557788888888654332211 111111 1100
Q ss_pred EEEcCC--CCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 171 LCWHAT--NPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 171 i~~~~~--~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
+|. ....+++++.|+.++.||.++++..-...... ...++|++..+++++.|+.++.||+.++...+
T Consensus 86 ---sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 ---SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp ---CSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ---CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 110 23456678889999999999987533222211 24567889999999999999999988765543
No 230
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.55 E-value=0.023 Score=46.31 Aligned_cols=183 Identities=9% Similarity=0.127 Sum_probs=104.2
Q ss_pred ccccCCCCEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 46 EYQAHGSKVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 46 ~~~~h~~~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
.+.+-.+.+..|+|+|+++.|++. ..++.|...|.. +.......+.+ ....-.+++.+.+ .++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g-~~D~EGIa~~~~g-~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GDLIRTIPLDF-VKDLETIEYIGDN-QFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CCEEEEEECSS-CSSEEEEEECSTT-EEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CCEEEEEecCC-CCChHHeEEeCCC-EEEEEECCCCcEEEE
Confidence 344555679999999988877764 455566665543 43322211222 2456777777533 455554457777777
Q ss_pred ECCCCCcce----------------------------EEEeecCCCcEEEEEecc--CCCccceEEEe-------ccccc
Q psy9316 125 DARTQKSQI----------------------------MLASGSFDKSVAIFALDK--KGDLNKEVVYR-------GHTGS 167 (264)
Q Consensus 125 d~~~~~~~~----------------------------~~~~~~~d~~i~i~~~~~--~~~~~~~~~~~-------~h~~~ 167 (264)
++....... .+.++.......+|.++- .+. ...... .+...
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~--~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSN--ELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSS--CCEEEECHHHHHTCCSSC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCC--ceeeecchhhccccccCC
Confidence 664322100 011111112233444320 000 000110 11234
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeec----------CceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATK----------GENINITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~----------~~~~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
...++++|..+.+++.......+-++|...+........ .....|+|.|+|+.+++ +..+.++.|..
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 678999998888888888899999999887644333322 14578999999985555 66778888763
No 231
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.45 E-value=0.038 Score=46.27 Aligned_cols=161 Identities=16% Similarity=0.060 Sum_probs=92.1
Q ss_pred CCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCC-CcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC
Q psy9316 51 GSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGD-LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~-~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~ 128 (264)
-..+..++|+++++.|+-+. .++.|..++++.... ..........-.....+++++.++++.++-...+.|.+.|++.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 34678999999776666554 457888888753100 0111122222234466777655555555555667777777653
Q ss_pred CCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-CcEEEEeCCCCcceeEee--
Q psy9316 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQIIAT-- 205 (264)
Q Consensus 129 ~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-g~i~iwD~~t~~~~~~~~-- 205 (264)
.... .++ ......-..++..|.++.++.+.... +.|...++..........
T Consensus 109 ~~~~-~~~-------------------------~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~ 162 (316)
T 1ijq_A 109 VKRK-TLF-------------------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 162 (316)
T ss_dssp SSEE-EEE-------------------------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred CceE-EEE-------------------------ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC
Confidence 2211 110 00112335677777666666665443 788888887554332221
Q ss_pred cCceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 206 KGENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 206 ~~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
...+..++++|++..| .+-+..+.|..+|...
T Consensus 163 ~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 2357789999876655 4445677999999753
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.44 E-value=0.016 Score=47.49 Aligned_cols=172 Identities=13% Similarity=0.099 Sum_probs=98.0
Q ss_pred cccccccCC--CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCc
Q psy9316 43 DIKEYQAHG--SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 120 (264)
Q Consensus 43 ~~~~~~~h~--~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~ 120 (264)
.+++| .|. .....|.|+ ++.+..+.+.+|.|+++|+.+... .... +.. ......+.. .++++....-.++.
T Consensus 45 Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv-~~~~-l~~-~~FgeGit~--~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP-VWME-RLG-NIFAEGLAS--DGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC-SEEE-ECT-TCCEEEEEE--CSSCEEEEESSSCE
T ss_pred EEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE-EeEE-CCC-CcceeEEEE--eCCEEEEEEccCCE
Confidence 34555 443 346788887 455666677888999999876433 3222 332 112233444 34556665567999
Q ss_pred EEEEECCCCCcce-----------------EEEeecCCCcEEEEEeccCCCccceEEEeccc---cceeeEEEcCCCCCE
Q psy9316 121 VRIWDARTQKSQI-----------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHT---GSVDQLCWHATNPDL 180 (264)
Q Consensus 121 i~vwd~~~~~~~~-----------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~---~~i~~i~~~~~~~~~ 180 (264)
+.+||.++.+... ++++ ..++.|.++|.......... ....+. ..++.+.|. ++.+
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I-~V~~~g~~v~~lNeLe~~--dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRS-DGGTMLTFHEPDGFALVGAV-QVKLRGQPVELINELECA--NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCCEEEETTEEEEE-CSSSEEEEECTTTCCEEEEE-ECEETTEECCCEEEEEEE--TTEE
T ss_pred EEEEECCcCcEEEEEeCCCceeEEecCCCEEEEE-CCCCEEEEEcCCCCeEEEEE-EeCCCCcccccccccEEe--CCEE
Confidence 9999998765322 2222 23455555554332211111 111121 234667775 4567
Q ss_pred EEEEeCCCcEEEEeCCCCcceeEee--------------c-CceEEEEEcCCCCEE-EEee
Q psy9316 181 LSTASGDKTVRIWDARTQKSQIIAT--------------K-GENINITWAPNGNTI-AVGN 225 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t~~~~~~~~--------------~-~~~~~v~~sp~g~~l-a~gs 225 (264)
++..-.++.|.+-|.++++...... . ...+.|+|+|+++.| ++|.
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 7766678899999999987522111 0 134679999976655 5554
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.40 E-value=0.036 Score=44.78 Aligned_cols=157 Identities=13% Similarity=0.105 Sum_probs=91.4
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeC--CCcEEEEECCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDART 128 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~~~ 128 (264)
.....+++++++..|+.+. ..+.|.+++++. .... ............++++|.++.+.++... .+.|..++++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--~~~~-~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--TQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCC--CCEE-EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 4678999999877666654 457888888653 2221 1122222456788888865544444332 35666666653
Q ss_pred CCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-ecC
Q psy9316 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-TKG 207 (264)
Q Consensus 129 ~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~~~ 207 (264)
.... .+. ......-..++++|+++.++++....+.|..+|+......... ...
T Consensus 156 ~~~~-~~~-------------------------~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~ 209 (267)
T 1npe_A 156 TNRR-ILA-------------------------QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ 209 (267)
T ss_dssp CCCE-EEE-------------------------CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC
T ss_pred CCcE-EEE-------------------------ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC
Confidence 2111 110 0011234567888866667777777899999999865432222 223
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 208 ENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 208 ~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
.+..++.. .+..+++...++.|..+|..++
T Consensus 210 ~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 210 YPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp SEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred CceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 45566654 3444444456789999997643
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.38 E-value=0.0087 Score=50.06 Aligned_cols=158 Identities=9% Similarity=0.061 Sum_probs=91.1
Q ss_pred EEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe------------------cccccEEeEEEecCCCCeEEEE
Q psy9316 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR------------------GHTGSVDQLCWHATNPDLLSTA 115 (264)
Q Consensus 54 V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~------------------~h~~~v~~i~~~~~~~~~l~s~ 115 (264)
..+++++++++++.++..++.|..|+... +... ..... .....+..+++.+.+++++ .+
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~-v~ 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPN-SGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY-IV 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTT-TCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE-EE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCC-CceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEE-EE
Confidence 45688999998888888889998886542 1111 11100 0113467888876343444 44
Q ss_pred eCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcC-CCCCEEEEEeC--------
Q psy9316 116 SGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA-TNPDLLSTASG-------- 186 (264)
Q Consensus 116 s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~-~~~~~i~s~~~-------- 186 (264)
...+.+..+|.+++... .++.. .++ ......+.+++.+ ++ .+.++...
T Consensus 98 d~~~~i~~~d~~~g~~~-~~~~~-~~~--------------------~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHAT-QLATS-VDG--------------------VPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGV 154 (322)
T ss_dssp ETTTEEEEECTTCEECE-EEESE-ETT--------------------EECSCEEEEEECTTTC-CEEEEESCSSCCTTCH
T ss_pred ECCCCEEEEeCCCCEEE-Eeccc-CCC--------------------CcccccceEEEecCCC-EEEEECCccccccccc
Confidence 44445777776543211 11100 000 0012345677776 44 55554322
Q ss_pred ---------CCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEe-eCCCeEEEEEccc
Q psy9316 187 ---------DKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVG-NKEDLVTFIDVVK 237 (264)
Q Consensus 187 ---------dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~g-s~d~~i~~~d~~~ 237 (264)
+|.|..||..+++..... .......++|+|+|+.|.++ +.++.|..||+..
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 367888998776543222 22445679999999966555 6678999999764
No 235
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.36 E-value=0.065 Score=50.91 Aligned_cols=165 Identities=15% Similarity=0.051 Sum_probs=93.3
Q ss_pred cccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCC-CcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 47 YQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGD-LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 47 ~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~-~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
+......+..|+|++....|+-+. ..+.|..++++.... .....++.........|++.+.+.++.++-...+.|.+.
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 333445678999998666666544 456788887653211 111222332334456777776665666666667788888
Q ss_pred ECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-CcEEEEeCCCCcceeE
Q psy9316 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQII 203 (264)
Q Consensus 125 d~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-g~i~iwD~~t~~~~~~ 203 (264)
+++..... .++. .....-..|++.|..+.++.+-... +.|...++........
T Consensus 499 ~ldG~~~~-~l~~-------------------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 499 DTKGVKRK-TLFR-------------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp ETTSSSEE-EEEE-------------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred eCCCCeEE-EEEe-------------------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 87643211 1111 1112345677777655565554333 6788888876554333
Q ss_pred ee--cCceEEEEEcCCCCEEE-EeeCCCeEEEEEccc
Q psy9316 204 AT--KGENINITWAPNGNTIA-VGNKEDLVTFIDVVK 237 (264)
Q Consensus 204 ~~--~~~~~~v~~sp~g~~la-~gs~d~~i~~~d~~~ 237 (264)
.. ...+..|++++.+..|. +-...+.|..+|+..
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 22 23577888887655554 445667788888653
No 236
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.17 E-value=0.077 Score=43.93 Aligned_cols=193 Identities=10% Similarity=0.119 Sum_probs=99.8
Q ss_pred cCceEEeccccccccccccCCCCEEEEEECCCCCeEEEEECCCc--EEEEEeccCCCCcccEEEecccccEEeEEEecCC
Q psy9316 31 IDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKS--VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108 (264)
Q Consensus 31 ~d~~~~~~~~~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~--i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 108 (264)
..+.|..++.......+..-.+.+..++++++|+++++...... |..++... +........ ........++..+ +
T Consensus 51 ~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~-g~~~~~~~~-~~~~~~~g~~~~~-~ 127 (306)
T 2p4o_A 51 EVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD-GTVETLLTL-PDAIFLNGITPLS-D 127 (306)
T ss_dssp TTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-SCEEEEEEC-TTCSCEEEEEESS-S
T ss_pred CCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC-CeEEEEEeC-CCccccCcccccC-C
Confidence 45566666543333332233456889999999996665443333 54454332 322211111 1112223333332 3
Q ss_pred CCeEEEEeCCCcEEEEECCCCCc----------------------------ceEEEeecCCCcEEEEEeccCCCccceEE
Q psy9316 109 PDLLSTASGDKTVRIWDARTQKS----------------------------QIMLASGSFDKSVAIFALDKKGDLNKEVV 160 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~~----------------------------~~~~~~~~~d~~i~i~~~~~~~~~~~~~~ 160 (264)
...+++-..++.|..+|..+++. ..++++....+.|..+++...+.......
T Consensus 128 ~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~ 207 (306)
T 2p4o_A 128 TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEI 207 (306)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEE
T ss_pred CcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEE
Confidence 33444444578888888753210 01233334455666676653232211111
Q ss_pred EeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ec-CceEEEEEc---CCCCEEEEeeCCC
Q psy9316 161 YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TK-GENINITWA---PNGNTIAVGNKED 228 (264)
Q Consensus 161 ~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~-~~~~~v~~s---p~g~~la~gs~d~ 228 (264)
+.. ...-..+++.+++ .++++....+.|.++|.......... .. ..+.+++|. |+++.|.+.+..+
T Consensus 208 ~~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 208 FVE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred Eec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 111 1234557777754 67777777889999998633211111 12 357889998 8988887766544
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.12 E-value=0.071 Score=43.08 Aligned_cols=178 Identities=12% Similarity=0.107 Sum_probs=96.9
Q ss_pred ccccccCC--CCEEEEEECCCCCeEEEEECCC--cEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC
Q psy9316 44 IKEYQAHG--SKVHSVAWSCDGRRLASGSFDK--SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119 (264)
Q Consensus 44 ~~~~~~h~--~~V~~l~~s~~g~~l~s~s~dg--~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg 119 (264)
+++| .|. .....|.|+. +....+.+.+| .|+++|+.+. .......+..+ ..-..+... ++++....-.++
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg-kv~~~~~l~~~-~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG-RILQRAEVPPP-YFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC-CEEEEEECCTT-CCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC-CEEEEEeCCCC-cceeEEEEe--CCEEEEEEeeCC
Confidence 4455 554 4577899985 55555666654 8999998753 32221212111 112334433 445555555689
Q ss_pred cEEEEECCCCCcce-----------------EEEeecCCCcEEEEEeccCCCccceEEEeccc---cceeeEEEcCCCCC
Q psy9316 120 TVRIWDARTQKSQI-----------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHT---GSVDQLCWHATNPD 179 (264)
Q Consensus 120 ~i~vwd~~~~~~~~-----------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~---~~i~~i~~~~~~~~ 179 (264)
.+.+||.++.+... ++++ ..++.|.++|.......... ....+. ..++.+.|. ++.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I-~V~~~g~~~~~lNeLe~~--~G~ 161 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMS-DGTAVIRKLDPDTLQQVGSI-KVTAGGRPLDNLNELEWV--NGE 161 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEE-CSSSEEEEECTTTCCEEEEE-ECEETTEECCCEEEEEEE--TTE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEE-CCCCeEEEEeCCCCeEEEEE-EEccCCcccccceeeEEe--CCE
Confidence 99999998754322 2222 23445555554332211111 111111 234566665 456
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeEee--------------c-CceEEEEEcCCCCEE-EEeeCCCeEE
Q psy9316 180 LLSTASGDKTVRIWDARTQKSQIIAT--------------K-GENINITWAPNGNTI-AVGNKEDLVT 231 (264)
Q Consensus 180 ~i~s~~~dg~i~iwD~~t~~~~~~~~--------------~-~~~~~v~~sp~g~~l-a~gs~d~~i~ 231 (264)
+++..-.+..|.+.|.++++...... . ...+.|+|+|+++.| ++|..=..++
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~ 229 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLY 229 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEE
Confidence 77666578899999999988522211 1 124679999977655 5554333333
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.12 E-value=0.008 Score=56.14 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=40.8
Q ss_pred CcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCC
Q psy9316 188 KTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 188 g~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
|.|..||+.+++..-.. .........++.+|..+++++.|+.++.||+.++...
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 78999999998753332 2333445567778889999999999999998875543
No 239
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.12 E-value=0.1 Score=44.34 Aligned_cols=158 Identities=12% Similarity=0.033 Sum_probs=95.2
Q ss_pred CCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCC
Q psy9316 51 GSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~ 129 (264)
-..+..++|++....|+-+. ..+.|..++++.. ... .+..........+++.+.++++..+-...+.|.+.+++..
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~--~~~-~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGS--NVE-EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCC--Cce-EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 34578999998776666554 5677888876532 111 1222222334567777656555555555677777776532
Q ss_pred CcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-CcEEEEeCCCCcceeEee--c
Q psy9316 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQIIAT--K 206 (264)
Q Consensus 130 ~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-g~i~iwD~~t~~~~~~~~--~ 206 (264)
... .++ ......-..+++.|.++.++.+-... +.|..+|+.......... .
T Consensus 149 ~~~-~l~-------------------------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 202 (349)
T 3v64_C 149 HRK-VLL-------------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 202 (349)
T ss_dssp SCE-EEE-------------------------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC
T ss_pred ceE-EEE-------------------------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 211 110 11112335677888766677776666 889999887654332222 2
Q ss_pred CceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 207 GENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 207 ~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
..+..++++|++..| .+-+..+.|..+|...
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 346789999866655 5556678899999753
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.07 E-value=0.11 Score=43.99 Aligned_cols=170 Identities=10% Similarity=0.090 Sum_probs=92.4
Q ss_pred CCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcce--------
Q psy9316 62 DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------- 133 (264)
Q Consensus 62 ~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~-------- 133 (264)
++..|+.++.++.+..+|... +... -.+............. + ..++.++.++.+..+|.++++...
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~t-G~~~--W~~~~~~~~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSD-GTVA--WQTKVAGEALSRPVVS--D-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTT-CCEE--EEEECSSCCCSCCEEE--T-TEEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred eCCEEEEEcCCCEEEEEECCC-CCEE--EEEeCCCceEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence 467788888999999998754 2211 1111111111111121 2 466678889999999987765221
Q ss_pred --------------EEEeecCCCcEEEEEeccCCCccceEEEeccc-----cceeeEEEcCC-CCCEEEEEeCCCcEEEE
Q psy9316 134 --------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHT-----GSVDQLCWHAT-NPDLLSTASGDKTVRIW 193 (264)
Q Consensus 134 --------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~-----~~i~~i~~~~~-~~~~i~s~~~dg~i~iw 193 (264)
.+..+..++.+..++.......... ...... ..+..+.-.|. ....+..++.++.+..+
T Consensus 176 ~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 176 LSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQ-RISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp ---CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEE-ECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEE-ecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 2344555666666665432211111 000000 00000101110 12456667789999999
Q ss_pred eCCCCcceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 194 DARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 194 D~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
|.++++..-.........+.. ++..+.+++.++.+..+|..++..
T Consensus 255 d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 255 DLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVT 299 (376)
T ss_dssp ETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCE
T ss_pred ECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcE
Confidence 999887543333333333333 477788888899999999876543
No 241
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.05 E-value=0.0047 Score=54.40 Aligned_cols=69 Identities=9% Similarity=0.000 Sum_probs=50.9
Q ss_pred eEEEcCCCCCEEEEEe---------CCCcEEEEeCCCCcceeEe-ec--------CceEEEEEcCCCCEEEEeeC--CCe
Q psy9316 170 QLCWHATNPDLLSTAS---------GDKTVRIWDARTQKSQIIA-TK--------GENINITWAPNGNTIAVGNK--EDL 229 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~---------~dg~i~iwD~~t~~~~~~~-~~--------~~~~~v~~sp~g~~la~gs~--d~~ 229 (264)
.+.++|++..++++.. .++.|.++|..+.+..... .. .....+.++|||++|.++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 5788998776666542 4679999999998753222 22 23456899999999998864 688
Q ss_pred EEEEEcccC
Q psy9316 230 VTFIDVVKS 238 (264)
Q Consensus 230 i~~~d~~~~ 238 (264)
|.++|+.+.
T Consensus 202 VsVID~~t~ 210 (426)
T 3c75_H 202 VGVVDLEGK 210 (426)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999998763
No 242
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.04 E-value=0.061 Score=47.23 Aligned_cols=154 Identities=14% Similarity=0.160 Sum_probs=89.5
Q ss_pred CEEEEEECC-CCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCC----cEEEEECC
Q psy9316 53 KVHSVAWSC-DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK----TVRIWDAR 127 (264)
Q Consensus 53 ~V~~l~~s~-~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg----~i~vwd~~ 127 (264)
....|+++| ++..|+.+...+.|..++++. +.. ..+.........++|++++..++++...++ .+.+.+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~-~~v---~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEK-EYV---STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTT-TEE---EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCC-CEE---EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 356889998 466777776657788887643 111 112223445778888876543444332222 12222211
Q ss_pred CCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-eec
Q psy9316 128 TQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-ATK 206 (264)
Q Consensus 128 ~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~~ 206 (264)
. .......+.. ......++++|.++.++++-..++.|..+|..+...... ...
T Consensus 214 g-------------------------~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~ 267 (430)
T 3tc9_A 214 S-------------------------GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ 267 (430)
T ss_dssp G-------------------------TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred C-------------------------ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC
Confidence 1 0100001111 123455778886667877777789999999987654222 221
Q ss_pred --CceEEEEEcCCCCEE-EEeeCCCeEEEEEcc
Q psy9316 207 --GENINITWAPNGNTI-AVGNKEDLVTFIDVV 236 (264)
Q Consensus 207 --~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~ 236 (264)
.....++|+|+|++| ++-..++.|..++..
T Consensus 268 ~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 268 DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 246789999999954 555678899998865
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.01 E-value=0.15 Score=44.30 Aligned_cols=187 Identities=13% Similarity=0.063 Sum_probs=104.8
Q ss_pred eeEEEeecCceEEeccc-cccccccccCCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCC-CcccEEEecccccEE
Q psy9316 24 QFHLVCKIDDYVKHFNT-HNDIKEYQAHGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGD-LNKEVVYRGHTGSVD 100 (264)
Q Consensus 24 ~~~~~~~~d~~~~~~~~-~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~-~~~~~~~~~h~~~v~ 100 (264)
.++++..-. .|+.... ......+...-..+..|+|++....|+-+. ..+.|..++++.... .....+.........
T Consensus 84 ~~ll~~~~~-~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 84 AYLFFTNRH-EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp CEEEEEETT-EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred ceeEEeccc-eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 344444433 3443333 222333334456788999999777666654 467788887653110 111122222334566
Q ss_pred eEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCE
Q psy9316 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180 (264)
Q Consensus 101 ~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~ 180 (264)
.+++.+.+.++..+-...+.|.+.|++.......+ ......-..|+..|.++.+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~--------------------------~~~~~~P~~iavdp~~g~l 216 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF--------------------------RENGSKPRAIVVDPVHGFM 216 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE--------------------------ECSSCCEEEEEEETTTTEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE--------------------------eCCCCCcceEEEecccCeE
Confidence 77777655555555556677777777643211111 0011224567777766666
Q ss_pred EEEEeC-CCcEEEEeCCCCcceeEee--cCceEEEEEcCCCCEEEEe-eCCCeEEEEEccc
Q psy9316 181 LSTASG-DKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVG-NKEDLVTFIDVVK 237 (264)
Q Consensus 181 i~s~~~-dg~i~iwD~~t~~~~~~~~--~~~~~~v~~sp~g~~la~g-s~d~~i~~~d~~~ 237 (264)
+.+-.. .+.|...++.......... ...+..++++|++..|..+ +..+.|..+|+..
T Consensus 217 y~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 217 YWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 665433 4789988888655433322 2457889999877665444 6678899999753
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.99 E-value=0.064 Score=50.60 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=80.5
Q ss_pred CEEEEEEC-CCCCeEEEEEC-CC----cEEEEEeccC-CCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-----Cc
Q psy9316 53 KVHSVAWS-CDGRRLASGSF-DK----SVAIFALDKK-GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-----KT 120 (264)
Q Consensus 53 ~V~~l~~s-~~g~~l~s~s~-dg----~i~v~~~~~~-~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-----g~ 120 (264)
.+...+|| |||++|+-+.. +| .|.++++... ..... .+. .....+.|+|++..++.+ ..| ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~---~~~~~~~WspDg~~l~y~-~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVS---GTNGEIVWGPDHTSLFYV-TKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEE---EECSCCEECSSTTEEEEE-EECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--ccc---CceeeEEEecCCCEEEEE-EECCCCCCCE
Confidence 57789999 99998886543 33 4889888653 21111 111 113467899977555544 433 13
Q ss_pred EEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC--CCcEEEEeCCCC
Q psy9316 121 VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQ 198 (264)
Q Consensus 121 i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~--dg~i~iwD~~t~ 198 (264)
|+++++.+..... ..++.. ........+.|+|++..++++... ...|.++|+.+.
T Consensus 249 v~~~~lgt~~~~~----------~lv~~~-------------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 249 VWRHVMGKLQSED----------VCLYEE-------------HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEETTSCGGGC----------EEEEEC-------------CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCchhc----------EEEEec-------------CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 5555554432110 111110 111223457888876555544433 446777888875
Q ss_pred cc-e--eEee---cCceEEEEEcCCCCEEEEeeCCC-----eEEEEEccc
Q psy9316 199 KS-Q--IIAT---KGENINITWAPNGNTIAVGNKED-----LVTFIDVVK 237 (264)
Q Consensus 199 ~~-~--~~~~---~~~~~~v~~sp~g~~la~gs~d~-----~i~~~d~~~ 237 (264)
.. . .... .+...++.|+. |+.|+..+..+ .|..+|+..
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 31 1 1111 12234444443 66665554432 567777653
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.94 E-value=0.13 Score=42.52 Aligned_cols=175 Identities=13% Similarity=0.120 Sum_probs=97.5
Q ss_pred CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeC-CC-cEEEEECCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-DK-TVRIWDARTQ 129 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~-dg-~i~vwd~~~~ 129 (264)
.....++|+++++.+++-..++.|..|+.+ +... ..+. .......+++.+++ +++++... ++ .+..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g~~~--~~~~-~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPD--GNQQ--IHAT-VEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT--CCEE--EEEE-CSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCC--CceE--EEEe-CCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCC
Confidence 457789999999866666577888888643 2221 1122 23457788888865 45544433 22 4666665554
Q ss_pred Ccce--------------------EEEeecCCCcEEEEEeccCCCccceEEEe---------ccccceeeEEEcCCCCCE
Q psy9316 130 KSQI--------------------MLASGSFDKSVAIFALDKKGDLNKEVVYR---------GHTGSVDQLCWHATNPDL 180 (264)
Q Consensus 130 ~~~~--------------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~---------~h~~~i~~i~~~~~~~~~ 180 (264)
+... .+++...++.|..++.... ........ .....-+.| +|++..+
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~--~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP--SGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT--EEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC--cEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 3211 1122223444444443210 00000000 001122334 4555557
Q ss_pred EEEEeCCCcEEEEeCCC-Ccc---eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 181 LSTASGDKTVRIWDART-QKS---QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 181 i~s~~~dg~i~iwD~~t-~~~---~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+++-...+.|..||+.. +.. ........+..++++++|+++++....+.|..+|..
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 77777789999999875 221 111112345568999999988888778899999864
No 246
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.92 E-value=0.17 Score=43.62 Aligned_cols=159 Identities=12% Similarity=0.036 Sum_probs=93.4
Q ss_pred CCCCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC
Q psy9316 50 HGSKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128 (264)
Q Consensus 50 h~~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~ 128 (264)
.-..+..++|++....|+-+. ..+.|..++++. .... .+..........+++.+.++.+.++-...+.|.+.+++.
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g--~~~~-~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNG--SNVE-EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CCEE-EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC--CCcE-EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 344678999998766666554 567788887653 2111 122222223456677665555555555566666666653
Q ss_pred CCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-CcEEEEeCCCCcceeEee--
Q psy9316 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQIIAT-- 205 (264)
Q Consensus 129 ~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-g~i~iwD~~t~~~~~~~~-- 205 (264)
.... .++ ......-..|++.|.++.++.+-... +.|..+|+..........
T Consensus 191 ~~~~-~l~-------------------------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 244 (386)
T 3v65_B 191 AHRK-VLL-------------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH 244 (386)
T ss_dssp CSCE-EEE-------------------------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred CceE-Eee-------------------------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC
Confidence 2211 110 11112335677777766676665555 789999987655433322
Q ss_pred cCceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 206 KGENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 206 ~~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
...+..++++|++..| .+-+..+.|..+|...
T Consensus 245 ~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 245 LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 2346789999866655 5556678899998753
No 247
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.90 E-value=0.14 Score=47.30 Aligned_cols=179 Identities=9% Similarity=0.100 Sum_probs=94.8
Q ss_pred EEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEecccccE-EeEEEecCCCCeEEEEe-CC-----CcEEEEE
Q psy9316 54 VHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYRGHTGSV-DQLCWHATNPDLLSTAS-GD-----KTVRIWD 125 (264)
Q Consensus 54 V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~~h~~~v-~~i~~~~~~~~~l~s~s-~d-----g~i~vwd 125 (264)
..+.++.++++.++.||. +..+.+||..... ..... ..+.... ..+...+ ++++++.|+ .+ ..+.+||
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~-W~~~~--~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS-WIPGP--DMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTE-EEECC--CCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCc-eeECC--CCCccccccceEEec-CCeEEEEeCcccCCcccccceEeC
Confidence 345677889999999884 4589999876432 11100 0111111 1223333 446777787 34 4688999
Q ss_pred CCCCCcc-----------------------eEEEeecCCC---------cEEEEEeccCCCccceEEEecc-------cc
Q psy9316 126 ARTQKSQ-----------------------IMLASGSFDK---------SVAIFALDKKGDLNKEVVYRGH-------TG 166 (264)
Q Consensus 126 ~~~~~~~-----------------------~~~~~~~~d~---------~i~i~~~~~~~~~~~~~~~~~h-------~~ 166 (264)
..+.+-. .+++.|+.++ .+..|+...+.-.. ....... ..
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~-~~~~~~~~~~~~~~~~ 399 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-SAGKRQSNRGVAPDAM 399 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-EEEECEETTEECCCCB
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee-cCCccccccccCCCCC
Confidence 8764211 0123333332 24455544322111 0000000 01
Q ss_pred ceeeEEEcCCCCCEEEEEeCCC-----------cEEEEeCCCCcceeEe----ecCc-eEEEEEcCCCCEEEEeeCC---
Q psy9316 167 SVDQLCWHATNPDLLSTASGDK-----------TVRIWDARTQKSQIIA----TKGE-NINITWAPNGNTIAVGNKE--- 227 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~dg-----------~i~iwD~~t~~~~~~~----~~~~-~~~v~~sp~g~~la~gs~d--- 227 (264)
.-.++.+...++.+++.|+.++ .+.+||..+..-.... ...+ ..+....|+|+.+++|+.+
T Consensus 400 ~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 400 CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 1233444344567777777543 6888998876532221 1111 2345677899999999864
Q ss_pred --------CeEEEEEccc
Q psy9316 228 --------DLVTFIDVVK 237 (264)
Q Consensus 228 --------~~i~~~d~~~ 237 (264)
..+.+||+.+
T Consensus 480 ~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp TTCCCSBCCCCEEEEGGG
T ss_pred CcCCCCcccceEEEcCCC
Confidence 4689999865
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.77 E-value=0.061 Score=50.26 Aligned_cols=56 Identities=14% Similarity=0.044 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 187 DKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 187 dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
+|.|..||+.+++..-.. .......-.++..|..+++|+.|+.++.||.+++....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccce
Confidence 478999999998854332 22333344667789999999999999999988765543
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.71 E-value=0.088 Score=48.06 Aligned_cols=173 Identities=9% Similarity=0.012 Sum_probs=103.6
Q ss_pred CCEEEEEE-C-CCCCeEEEEEC------------------CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCe
Q psy9316 52 SKVHSVAW-S-CDGRRLASGSF------------------DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 111 (264)
Q Consensus 52 ~~V~~l~~-s-~~g~~l~s~s~------------------dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~ 111 (264)
.....+++ + |++++++.++. ++.+.+.|.++. .......- .+....+..+|++ .+
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~---~v~~qI~V-gg~pd~~~~spdG-k~ 208 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKW---EVAWQVLV-SGNLDNCDADYEG-KW 208 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTT---EEEEEEEE-SSCCCCEEECSSS-SE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCC---eEEEEEEe-CCCccceEECCCC-CE
Confidence 45788888 5 99999999852 346777776532 11111110 1123456677755 56
Q ss_pred EEEEeCCC---------------cEEEEECCCCCc-----ceEEEeecCCCcEEEEEecc--CCCccceEEEecccccee
Q psy9316 112 LSTASGDK---------------TVRIWDARTQKS-----QIMLASGSFDKSVAIFALDK--KGDLNKEVVYRGHTGSVD 169 (264)
Q Consensus 112 l~s~s~dg---------------~i~vwd~~~~~~-----~~~~~~~~~d~~i~i~~~~~--~~~~~~~~~~~~h~~~i~ 169 (264)
+++.+.+. .+.+.|...... ....+ +.+.+.|... .......... + ..-.
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i-----~~V~VID~~~~~~~~~~~~Ipv-g--~~Ph 280 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-----NGVKVVDGRKEASSLFTRYIPI-A--NNPH 280 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE-----TTEEEEECSGGGCCSSEEEEEE-E--SSCC
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE-----CcEEEEeCcccCCceeEEEEec-C--CCce
Confidence 66666542 355555432110 00111 4488888765 2221111111 1 2345
Q ss_pred eEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc----------ee--Ee-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 170 QLCWHATNPDLLSTASGDKTVRIWDARTQKS----------QI--IA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~----------~~--~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.+.++|++..+++++-.+.+|.++|+.+.+. .. .. ....+.-++|+|+|..+.+.--|+.|..||+.
T Consensus 281 Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 281 GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 6888998877888888999999999996521 11 11 12346779999999656777889999999987
Q ss_pred c
Q psy9316 237 K 237 (264)
Q Consensus 237 ~ 237 (264)
+
T Consensus 361 ~ 361 (595)
T 1fwx_A 361 D 361 (595)
T ss_dssp H
T ss_pred H
Confidence 6
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.71 E-value=0.12 Score=42.48 Aligned_cols=192 Identities=13% Similarity=0.070 Sum_probs=97.2
Q ss_pred EEeecCceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEe
Q psy9316 27 LVCKIDDYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105 (264)
Q Consensus 27 ~~~~~d~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~ 105 (264)
.++..++.+..++.. +....+..+...+.++...+++. |..++.++.+..++.. +... ..+......+..+...
T Consensus 111 ~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~--g~~~--~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 111 YVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD--GTEK--WRFKTNDAITSAASIG 185 (330)
T ss_dssp EEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT--SCEE--EEEECSSCCCSCCEEC
T ss_pred EEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC--CCEe--EEEecCCCceeeeEEc
Confidence 345556666555543 33333334444556666776776 5556777888888754 2211 1222233445555554
Q ss_pred cCCCCeEEEEeCCCcEEEEECCCCCcce------------------EEEeecCCCcEEEEEeccCCCccceEEEeccccc
Q psy9316 106 ATNPDLLSTASGDKTVRIWDARTQKSQI------------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167 (264)
Q Consensus 106 ~~~~~~l~s~s~dg~i~vwd~~~~~~~~------------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~ 167 (264)
+++ . +..++ +.+..+| .+++... .+..++.++.+..++ ..+... ..+......
T Consensus 186 ~~g-~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~--~~g~~~--~~~~~~~~~ 256 (330)
T 3hxj_A 186 KDG-T-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN--PDGTEK--WRFKTGKRI 256 (330)
T ss_dssp TTC-C-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC--TTSCEE--EEEECSSCC
T ss_pred CCC-E-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC--CCCCEe--EEeeCCCCc
Confidence 433 3 43444 7788888 4332111 122333444444443 222211 112222222
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCccee-Eeec-CceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-IATK-GENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~-~~~~-~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
+..+...+ ++ .|..++.+|.+..+|. +++... .... ..+.++...++|+ |.+|+.+|.+++....
T Consensus 257 ~~~~~~~~-~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 257 ESSPVIGN-TD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp CSCCEECT-TS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred cccceEcC-CC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 33344432 33 4445677889999996 444322 2222 2344566667776 4568889999998754
No 251
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.67 E-value=0.0076 Score=52.02 Aligned_cols=68 Identities=7% Similarity=-0.097 Sum_probs=49.9
Q ss_pred eEEEcCCCCCEEEEEe---------CCCcEEEEeCCCCcceeEe-ec--------CceEEEEEcCCCCEEEEeeC--CCe
Q psy9316 170 QLCWHATNPDLLSTAS---------GDKTVRIWDARTQKSQIIA-TK--------GENINITWAPNGNTIAVGNK--EDL 229 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~---------~dg~i~iwD~~t~~~~~~~-~~--------~~~~~v~~sp~g~~la~gs~--d~~ 229 (264)
.+.++|++..++++.. .++.|.+||+.+.+..... .. .....++++|||+++.++.. ++.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 5888998776666542 3789999999998853332 22 23557999999999998864 467
Q ss_pred EEE--EEccc
Q psy9316 230 VTF--IDVVK 237 (264)
Q Consensus 230 i~~--~d~~~ 237 (264)
+.+ +|+.+
T Consensus 149 v~V~~iD~~t 158 (368)
T 1mda_H 149 AGLSVPGASD 158 (368)
T ss_dssp EEEEETTTEE
T ss_pred EEEEEEchhh
Confidence 888 98754
No 252
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.65 E-value=0.08 Score=44.93 Aligned_cols=167 Identities=5% Similarity=-0.105 Sum_probs=91.4
Q ss_pred CCCeEEEEECCCcEEEEEeccCCCCcccEEEecc---------cccEEe-EEEecCCCCeEEEEeCCCcEEEEECCCCCc
Q psy9316 62 DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH---------TGSVDQ-LCWHATNPDLLSTASGDKTVRIWDARTQKS 131 (264)
Q Consensus 62 ~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h---------~~~v~~-i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~ 131 (264)
++..|+.++.++.|..+|... +... -.+... ...+.. +.. .+..++.++.++.+..+|.++++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~t-G~~~--W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADD-GKEI--WSVSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTT-CCEE--EEEECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCeEEEEEccC-Ccee--eeecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCCCCE
Confidence 367788888888899888754 2211 111111 112221 222 234677788999999999987653
Q ss_pred ce-----------------EEEeecCCCcEEEEEeccCCCccceEEEeccccce------eeEEEcCCCCCEEEEEeCCC
Q psy9316 132 QI-----------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSV------DQLCWHATNPDLLSTASGDK 188 (264)
Q Consensus 132 ~~-----------------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i------~~i~~~~~~~~~i~s~~~dg 188 (264)
.. .+..++.++.+..++.......... .. ..++ ...... ...++.+..+|
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~---~~-~~~~~~~~~~~~~~~~---~~~v~~g~~~g 198 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTV---NL-DMPSLSLRGESAPTTA---FGAAVVGGDNG 198 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEE---EC-CC-----CCCCCCEEE---TTEEEECCTTT
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEE---eC-CCCceeecCCCCcEEE---CCEEEEEcCCC
Confidence 21 2445566777777765433221111 10 0111 111111 23566678899
Q ss_pred cEEEEeCCCCcceeEeecCce------E---EEEEcC--CCCEEEEeeCCCeEEEEEcccCCCC
Q psy9316 189 TVRIWDARTQKSQIIATKGEN------I---NITWAP--NGNTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 189 ~i~iwD~~t~~~~~~~~~~~~------~---~v~~sp--~g~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
.+..+|.++++..-....... . .+.-+| .+..+.+++.++.+..+|..++...
T Consensus 199 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 199 RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM 262 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE
T ss_pred EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE
Confidence 999999998875333221100 0 011111 3567777788899999998765433
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.65 E-value=0.22 Score=41.26 Aligned_cols=68 Identities=10% Similarity=0.005 Sum_probs=45.0
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCc---ceeE-eecCceEEEEEcCCCCEEEEeeC----------CCeEEEE
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQK---SQII-ATKGENINITWAPNGNTIAVGNK----------EDLVTFI 233 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~---~~~~-~~~~~~~~v~~sp~g~~la~gs~----------d~~i~~~ 233 (264)
-+.|+++|++..++++-...+.|..||+.... .... ...+ +..++++++|+++++... .+.|..+
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~ 265 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKF 265 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEE
Confidence 34588888654466666677899999987532 1111 1234 677999999987766544 4567777
Q ss_pred Ecc
Q psy9316 234 DVV 236 (264)
Q Consensus 234 d~~ 236 (264)
|..
T Consensus 266 d~~ 268 (322)
T 2fp8_A 266 DEF 268 (322)
T ss_dssp CTT
T ss_pred CCC
Confidence 753
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.53 E-value=0.31 Score=45.87 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=44.2
Q ss_pred EEEEECCCCCeEEEEECCC-----cEEEEEeccCCCCcccEEEe-cccccEEeEEEecCCCCeEEEEeC--CCcEEEEEC
Q psy9316 55 HSVAWSCDGRRLASGSFDK-----SVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDA 126 (264)
Q Consensus 55 ~~l~~s~~g~~l~s~s~dg-----~i~v~~~~~~~~~~~~~~~~-~h~~~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~ 126 (264)
..+.|+|||+.|+....|. .|.++++.... .....++. ........+.|+|++..++++... ...+.++|+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ-SEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG-GGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc-hhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 4678999999888877652 46666654321 11223343 223445678899976544444433 345777888
Q ss_pred CCC
Q psy9316 127 RTQ 129 (264)
Q Consensus 127 ~~~ 129 (264)
.++
T Consensus 303 ~~~ 305 (751)
T 2xe4_A 303 RKG 305 (751)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.46 E-value=0.32 Score=40.71 Aligned_cols=183 Identities=9% Similarity=-0.023 Sum_probs=102.5
Q ss_pred CCEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 52 SKVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
..+.+++|++....|+-+ ...+.|..++.+... . ...+....-.....+++.+.++.+..+-...+.|.+++++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~-~-~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE-S-VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS-C-CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC-c-eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 356789999866655554 456788888765321 1 1122222223456777776666666666667889998886532
Q ss_pred cceE----------EEeecCCCcEE---------EEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEE
Q psy9316 131 SQIM----------LASGSFDKSVA---------IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191 (264)
Q Consensus 131 ~~~~----------~~~~~~d~~i~---------i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~ 191 (264)
.... ++....++.+. |+....++..... ........-+.|+++|.++.+..+-...+.|.
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI-IINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE-EECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE-EEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 1111 11111122222 2222223322211 11111123367899987777777777889999
Q ss_pred EEeCCCCcceeEe--ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 192 IWDARTQKSQIIA--TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 192 iwD~~t~~~~~~~--~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
.+|+......... ....+..+++.. +..+.+-...+.|..+|..++
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred EEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCC
Confidence 9999765433222 234567777764 344455667788888887543
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.42 E-value=0.03 Score=46.00 Aligned_cols=113 Identities=16% Similarity=0.059 Sum_probs=69.8
Q ss_pred cEEeEEEecCCCCeEEEEeC--CCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcC
Q psy9316 98 SVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 175 (264)
Q Consensus 98 ~v~~i~~~~~~~~~l~s~s~--dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~ 175 (264)
....+.|+++ +.+.++.+. ++.|.++|+.+++....+..+ .+. -...+++.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~------------------------~~~-fgeGi~~~- 74 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMD------------------------DSY-FGEGLTLL- 74 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECC------------------------TTC-CEEEEEEE-
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecC------------------------CCc-ceEEEEEe-
Confidence 3578889875 344444443 689999999887643222111 010 11123443
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 176 TNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 176 ~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+..+.++.-.++.+.++|..+.+.......+......+++||+.|.++..++.+.++|+.+.
T Consensus 75 -g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~ 136 (266)
T 2iwa_A 75 -NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTF 136 (266)
T ss_dssp -TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTC
T ss_pred -CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCC
Confidence 34566666678999999999887533322121223456678888877778999999998653
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.41 E-value=0.037 Score=45.35 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=71.9
Q ss_pred ccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCC
Q psy9316 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 176 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~ 176 (264)
.....+.|+ ++.+..+.+.+|.|+.+|+++++....+ ... .. --..++. .
T Consensus 55 ~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~------------------------~~-FgeGit~--~ 104 (268)
T 3nok_A 55 AFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLG------------------------NI-FAEGLAS--D 104 (268)
T ss_dssp CCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT------------------------TC-CEEEEEE--C
T ss_pred cccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC------------------------Cc-ceeEEEE--e
Confidence 345778876 4567778888999999999987754322 110 00 0011333 2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 177 NPDLLSTASGDKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 177 ~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+..+.++.-.++.+.+||..+.+..... .......+ +++|+.|.+...++.|.++|..+..
T Consensus 105 g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 105 GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCC
T ss_pred CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCe
Confidence 4456666667999999999998753332 23333334 4678888887789999999977543
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.40 E-value=0.21 Score=40.26 Aligned_cols=131 Identities=16% Similarity=0.150 Sum_probs=76.7
Q ss_pred ccEEeEEEecCCCCeEEEEeCCC--cEEEEECCCCCcce-------------------EEEeecCCCcEEEEEeccCCCc
Q psy9316 97 GSVDQLCWHATNPDLLSTASGDK--TVRIWDARTQKSQI-------------------MLASGSFDKSVAIFALDKKGDL 155 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~dg--~i~vwd~~~~~~~~-------------------~~~~~~~d~~i~i~~~~~~~~~ 155 (264)
+....+.|+. +.+..+.+.+| .|+.+|+++++... ++++...++.+.++|.....
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~-- 96 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT-- 96 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE--
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc--
Confidence 4577888874 45666666654 89999999876422 22333445556666653211
Q ss_pred cceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeE-ee--c----CceEEEEEcCCCCEEEEeeCCC
Q psy9316 156 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII-AT--K----GENINITWAPNGNTIAVGNKED 228 (264)
Q Consensus 156 ~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~-~~--~----~~~~~v~~sp~g~~la~gs~d~ 228 (264)
...++.- ...-..+++ ++..+++|- .++.|.++|.++.+.... .. . ...+.+.|. +|+.++..-.++
T Consensus 97 -~~~ti~~-~~~Gwglt~--dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 97 -PRARFRY-PGEGWALTS--DDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp -EEEEEEC-SSCCCEEEE--CSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred -EEEEEeC-CCCceEEee--CCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 1112211 111134443 455666664 588999999999764221 11 1 123456666 677766666788
Q ss_pred eEEEEEccc
Q psy9316 229 LVTFIDVVK 237 (264)
Q Consensus 229 ~i~~~d~~~ 237 (264)
.|.++|+.+
T Consensus 171 ~I~vIDp~t 179 (243)
T 3mbr_X 171 RIARIDPAS 179 (243)
T ss_dssp EEEEECTTT
T ss_pred eEEEEECCC
Confidence 889998765
No 259
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.32 E-value=0.43 Score=40.73 Aligned_cols=48 Identities=8% Similarity=0.137 Sum_probs=32.8
Q ss_pred CcEEEEeCCCCcceeE-eecCceEEEEEcCCCCEEEEe-eCCCeEEEEEccc
Q psy9316 188 KTVRIWDARTQKSQII-ATKGENINITWAPNGNTIAVG-NKEDLVTFIDVVK 237 (264)
Q Consensus 188 g~i~iwD~~t~~~~~~-~~~~~~~~v~~sp~g~~la~g-s~d~~i~~~d~~~ 237 (264)
|.+.-+|.. +.... ......+.++||||++.|.++ +..+.|..||+..
T Consensus 203 g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 556666663 33222 223457889999999887665 5678999999864
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.32 E-value=0.038 Score=45.15 Aligned_cols=112 Identities=11% Similarity=0.134 Sum_probs=69.1
Q ss_pred ccEEeEEEecCCCCeEEEEeCCC--cEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEc
Q psy9316 97 GSVDQLCWHATNPDLLSTASGDK--TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 174 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~dg--~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~ 174 (264)
.....+.|+ ++.+..+.+.+| .|+.+|+++++....+... ... --..+..
T Consensus 43 ~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~------------------------~~~-FgeGit~- 94 (262)
T 3nol_A 43 AFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG------------------------KRY-FGEGISD- 94 (262)
T ss_dssp CEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC------------------------TTC-CEEEEEE-
T ss_pred cccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC------------------------Ccc-ceeEEEE-
Confidence 335788887 346677777776 8999999987643222110 000 0011222
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 175 ATNPDLLSTASGDKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 175 ~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
.+..+.++.-.++.+.+||..+.+..... ..... ..++++++.|.+...++.|.++|+.+..
T Consensus 95 -~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~ 157 (262)
T 3nol_A 95 -WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPESLT 157 (262)
T ss_dssp -ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC--CCEEECSSCEEECCSSSEEEEECTTTCS
T ss_pred -eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc--eEEecCCCEEEEECCCCeEEEEcCCCCe
Confidence 23455555567899999999998754332 22332 3444678888777778999999987543
No 261
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.20 E-value=0.03 Score=52.43 Aligned_cols=160 Identities=16% Similarity=0.060 Sum_probs=87.2
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCC-CcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGD-LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~-~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~ 129 (264)
..+..|+|++++..|+.+. ..+.|..++++.... ......+.........+++.+.+++++++-...+.|.++|++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 3567889998777776654 457888888753100 00111111111223456665445455555445667777776532
Q ss_pred CcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC-CcEEEEeCCCCcceeEee--c
Q psy9316 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQIIAT--K 206 (264)
Q Consensus 130 ~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d-g~i~iwD~~t~~~~~~~~--~ 206 (264)
... .++ ......-..|++.|.++.++.+.... +.|..+++.......... .
T Consensus 486 ~~~-~l~-------------------------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l 539 (699)
T 1n7d_A 486 KRK-TLF-------------------------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 539 (699)
T ss_dssp CEE-EEC-------------------------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC
T ss_pred ceE-EEE-------------------------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC
Confidence 211 110 00011224567777655565554333 788888886544322221 2
Q ss_pred CceEEEEEcCCCC-EEEEeeCCCeEEEEEccc
Q psy9316 207 GENINITWAPNGN-TIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 207 ~~~~~v~~sp~g~-~la~gs~d~~i~~~d~~~ 237 (264)
..+..|+|+|++. ++.+-+..+.|..+|+..
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3466799998755 445556778899999753
No 262
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.04 E-value=0.26 Score=45.02 Aligned_cols=170 Identities=14% Similarity=0.056 Sum_probs=87.2
Q ss_pred CCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEecccccEEeEEEe--cCCCCeEEEEe------------------CCC
Q psy9316 61 CDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH--ATNPDLLSTAS------------------GDK 119 (264)
Q Consensus 61 ~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~--~~~~~~l~s~s------------------~dg 119 (264)
+||++|+.... +..|.+.|+.... ......+ .-......+.+. |++ .+++.++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~-~~~ii~i-p~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK-CDAILEI-PNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE-EEEEEEC-SSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce-EeeEEeC-CCCCCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCc
Confidence 48888888665 4569999886522 1111111 112346677763 545 4555553 345
Q ss_pred cEEEEECCCCCcceEEEe--------ecCCCcEEEEEeccCCCccceEEE-eccccceeeE------EEcCCCCCEEEEE
Q psy9316 120 TVRIWDARTQKSQIMLAS--------GSFDKSVAIFALDKKGDLNKEVVY-RGHTGSVDQL------CWHATNPDLLSTA 184 (264)
Q Consensus 120 ~i~vwd~~~~~~~~~~~~--------~~~d~~i~i~~~~~~~~~~~~~~~-~~h~~~i~~i------~~~~~~~~~i~s~ 184 (264)
.+.++|..+.+....+.. .+.||...+............... ..-.+.|..+ .+.+.+....+
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i-- 253 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-- 253 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE--
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE--
Confidence 788889887654433333 223333333222111000000000 0000001100 01122222222
Q ss_pred eCCCcEEEEeCCC--Ccc-e-eEeecCceEEEEEcCCCCEE-EEeeCCCeEEEEEcccC
Q psy9316 185 SGDKTVRIWDART--QKS-Q-IIATKGENINITWAPNGNTI-AVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 185 ~~dg~i~iwD~~t--~~~-~-~~~~~~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~~ 238 (264)
+.|.|.|.++ +.. . .......+..+.++|||+++ +++..++.+.++|+.+.
T Consensus 254 ---~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 254 ---NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp ---TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred ---CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 5699999998 332 1 22234456789999999977 45567899999999853
No 263
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.01 E-value=0.29 Score=43.78 Aligned_cols=68 Identities=16% Similarity=0.049 Sum_probs=48.5
Q ss_pred eeEEEcCCCCCEEEEEeCCCcEEEEeCC-------CCcc-------------eeEeec--CceEEEEEcCCCCE-EEEee
Q psy9316 169 DQLCWHATNPDLLSTASGDKTVRIWDAR-------TQKS-------------QIIATK--GENINITWAPNGNT-IAVGN 225 (264)
Q Consensus 169 ~~i~~~~~~~~~i~s~~~dg~i~iwD~~-------t~~~-------------~~~~~~--~~~~~v~~sp~g~~-la~gs 225 (264)
..++.+|.++.++++-..++.|..+|+. ++.. .+.... .....++|+|+|++ +++-+
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 4567788777888888889999999997 5543 111111 23578999999995 45557
Q ss_pred CCCeEEEEEcc
Q psy9316 226 KEDLVTFIDVV 236 (264)
Q Consensus 226 ~d~~i~~~d~~ 236 (264)
..+.|+.+|..
T Consensus 330 ~~h~I~kid~d 340 (496)
T 3kya_A 330 NNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEecC
Confidence 78889997753
No 264
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.88 E-value=0.19 Score=46.76 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=40.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcceeEee-cCce--EEEEEcCCCC-EEEEeeC----------------CCeEEEEEccc
Q psy9316 178 PDLLSTASGDKTVRIWDARTQKSQIIAT-KGEN--INITWAPNGN-TIAVGNK----------------EDLVTFIDVVK 237 (264)
Q Consensus 178 ~~~i~s~~~dg~i~iwD~~t~~~~~~~~-~~~~--~~v~~sp~g~-~la~gs~----------------d~~i~~~d~~~ 237 (264)
+.+++.++.||.+++||.++++...... ...+ .-+.|.++|+ ++++.+. .+.+..|.+..
T Consensus 488 g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 488 GNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 3466778999999999999998644333 2222 3367778887 4455443 47788888774
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.85 E-value=0.2 Score=46.50 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=40.4
Q ss_pred CCCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCC
Q psy9316 186 GDKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 186 ~dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
.+|.|..||+.+++..-.. .........+...|.++++|+.|+.++.||...+...
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 3588999999998853332 2233333455667899999999999999998765443
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.67 E-value=0.74 Score=38.87 Aligned_cols=167 Identities=13% Similarity=0.140 Sum_probs=91.0
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEec----c--cccEEeEEE---ecCCCCeEEEEe-----
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRG----H--TGSVDQLCW---HATNPDLLSTAS----- 116 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~----h--~~~v~~i~~---~~~~~~~l~s~s----- 116 (264)
-.-.+++|++....+..++ ..++|..|+... +.... ..+.. . ...+..+.| .|. ++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~-~~~~~-~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af 89 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKT-QSHFN-VVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF 89 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTT-CCEEE-ECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCC-CeEEE-EecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence 3345788988655555555 789999997642 22111 11221 0 113578888 564 45555332
Q ss_pred --------CCCcEEEEECC---CCCcceEEEeecCCCcEEEEEeccCCCccce-EEEec-cccceeeEEEcCCCCCEEEE
Q psy9316 117 --------GDKTVRIWDAR---TQKSQIMLASGSFDKSVAIFALDKKGDLNKE-VVYRG-HTGSVDQLCWHATNPDLLST 183 (264)
Q Consensus 117 --------~dg~i~vwd~~---~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~-~~~~~-h~~~i~~i~~~~~~~~~i~s 183 (264)
.+..+..+|+. +++....+ ++.. .... ....+ -....+.+...+.+ ...++
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~------------dL~~---~~~~~~~~~g~~~~~~nDvavD~~G-naYVt 153 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSV------------NFEK---VQDEFEKKAGKRPFGVVQSAQDRDG-NSYVA 153 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEE------------ESHH---HHHHHHHHHSSCCEEEEEEEECTTS-CEEEE
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEe------------cCcc---ccccccccccccccCCceeEECCCC-CEEEe
Confidence 14556667766 43322111 1100 0000 00000 01236677777654 45556
Q ss_pred EeCC-CcEEEEeCCCCcceeEee-c------CceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 184 ASGD-KTVRIWDARTQKSQIIAT-K------GENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 184 ~~~d-g~i~iwD~~t~~~~~~~~-~------~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
++.. +.|...|........... . .....+++.|+|+.|++....+.+.-+|+..
T Consensus 154 ~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 154 FALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 6666 777777776553221111 1 1145799999999888887799999999873
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.66 E-value=1 Score=39.43 Aligned_cols=201 Identities=11% Similarity=0.105 Sum_probs=100.7
Q ss_pred ceEEeccc-cccccccccCCCCEEEEEECCCCCeEEEEECCC---cEEEEEeccCCCCcccEEEecccccEEeEEEecCC
Q psy9316 33 DYVKHFNT-HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDK---SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108 (264)
Q Consensus 33 ~~~~~~~~-~~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~dg---~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 108 (264)
+.|+.++. ...+..+.........++++++|+ |+.+...+ .-.++.+...+.......+. .-.....++++|.+
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~ 239 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQN 239 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTT
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCC
Confidence 44544443 333444444445688999999999 55554322 11222222222221111111 22334567788755
Q ss_pred CCeEEEEeCCCcEEEEECCCCCc-ceEE----------EeecCCC-----------cEEEEEeccC-CCccceEEEecc-
Q psy9316 109 PDLLSTASGDKTVRIWDARTQKS-QIML----------ASGSFDK-----------SVAIFALDKK-GDLNKEVVYRGH- 164 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~~-~~~~----------~~~~~d~-----------~i~i~~~~~~-~~~~~~~~~~~h- 164 (264)
+.+.++-..++.|+.+|..++.. ...+ ++-+.++ .|..++.+.. +.+.....+.+.
T Consensus 240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~ 319 (433)
T 4hw6_A 240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH 319 (433)
T ss_dssp CCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT
T ss_pred CeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC
Confidence 56665555678888888875433 1110 1112233 2333333211 111111111111
Q ss_pred --------------ccceeeEEEc--------CCCCCEEEEEeCCCcEEEEeCCCCcceeEee-----------------
Q psy9316 165 --------------TGSVDQLCWH--------ATNPDLLSTASGDKTVRIWDARTQKSQIIAT----------------- 205 (264)
Q Consensus 165 --------------~~~i~~i~~~--------~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~----------------- 205 (264)
...-..+++. ..++.++++-...+.|+.+|.. +.......
T Consensus 320 g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~ 398 (433)
T 4hw6_A 320 SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQ 398 (433)
T ss_dssp TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTT
T ss_pred CCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CCEEEEEeCCCCCccccCCCccccc
Confidence 0112346661 2344566666677888888853 33222211
Q ss_pred --cCceEEEEEc-CCCCEEEEeeCCCeEEEEEcc
Q psy9316 206 --KGENINITWA-PNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 206 --~~~~~~v~~s-p~g~~la~gs~d~~i~~~d~~ 236 (264)
...+..|+++ ++|..+++-..++.|+.+++.
T Consensus 399 ~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 399 ALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1235689999 677777777888899988864
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.29 E-value=0.61 Score=43.04 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=42.2
Q ss_pred EEEECC-CCCeEEEEECCC-----------cEEEEEeccCCCCcccEEEe-cccccEEeEEEecCCCCeEEEEeC-CCcE
Q psy9316 56 SVAWSC-DGRRLASGSFDK-----------SVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHATNPDLLSTASG-DKTV 121 (264)
Q Consensus 56 ~l~~s~-~g~~l~s~s~dg-----------~i~v~~~~~~~~~~~~~~~~-~h~~~v~~i~~~~~~~~~l~s~s~-dg~i 121 (264)
..++.+ +++.++.|+.+. .+.+||...+. ......+. .+......+++.. ++.+++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCce
Confidence 455667 888888887643 47778776533 22222221 2222333345544 4577888884 5689
Q ss_pred EEEECCCC
Q psy9316 122 RIWDARTQ 129 (264)
Q Consensus 122 ~vwd~~~~ 129 (264)
.+||..+.
T Consensus 268 ~~yd~~t~ 275 (656)
T 1k3i_A 268 SLYDSSSD 275 (656)
T ss_dssp EEEEGGGT
T ss_pred EEecCcCC
Confidence 99997653
No 269
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.16 E-value=1 Score=41.86 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=45.7
Q ss_pred eEEEcCCCCCEEEEEeCCC-------------------cEEEEeCCCCcceeEeec-----------CceEEEEEcCCCC
Q psy9316 170 QLCWHATNPDLLSTASGDK-------------------TVRIWDARTQKSQIIATK-----------GENINITWAPNGN 219 (264)
Q Consensus 170 ~i~~~~~~~~~i~s~~~dg-------------------~i~iwD~~t~~~~~~~~~-----------~~~~~v~~sp~g~ 219 (264)
.+.+.|.. .+++.+..++ .|..+|.++++..-.... ....-.....+|+
T Consensus 239 ~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 45666643 4666677665 399999999985332211 1112223333665
Q ss_pred ---EEEEeeCCCeEEEEEcccCCC
Q psy9316 220 ---TIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 220 ---~la~gs~d~~i~~~d~~~~~~ 240 (264)
.++.++.+|.++++|..++..
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEEEEECCCCeEEEEECCCCCE
Confidence 889999999999999877554
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.07 E-value=1.6 Score=38.09 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=53.9
Q ss_pred ceEEecccc-ccccccccCCCCEEEEEECCCCCeEEEEECC-C--cEEEEEeccCCCCcccEEEecccccEEeEEEecCC
Q psy9316 33 DYVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFD-K--SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108 (264)
Q Consensus 33 ~~~~~~~~~-~~~~~~~~h~~~V~~l~~s~~g~~l~s~s~d-g--~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~ 108 (264)
+.|..++.. ..+..+.........++|+++|++|+.+... + ...++-+...+.......+. .......++++|.+
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~ 237 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPIN 237 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTT
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCC
Confidence 344444432 2334444444568899999999977776542 1 11222222233332111222 12335677888866
Q ss_pred CCeEEEEeCCCcEEEEECCCCC
Q psy9316 109 PDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
+.++++-..++.|..+|.+...
T Consensus 238 g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 238 GELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp CCEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCEEEEEECCCCc
Confidence 6666666678899999987543
No 271
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.94 E-value=1.1 Score=36.64 Aligned_cols=157 Identities=12% Similarity=0.046 Sum_probs=82.5
Q ss_pred CCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceE--------
Q psy9316 63 GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM-------- 134 (264)
Q Consensus 63 g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~-------- 134 (264)
+..|..++.++.+..++.. +.. ...+......+..+...+ + ..+..++.++.+..+|.+ ++....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~--g~~--~~~~~~~~~~~~~~~~~~-~-g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD--GTE--KWRFKTKKAIYATPIVSE-D-GTIYVGSNDNYLYAINPD-GTEKWRFKTNDAIT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTT--SCE--EEEEECSSCCCSCCEECT-T-SCEEEECTTSEEEEECTT-SCEEEEEECSSCCC
T ss_pred CCEEEEEecCCEEEEEcCC--CCE--EEEEcCCCceeeeeEEcC-C-CEEEEEcCCCEEEEECCC-CCEeEEEecCCCce
Confidence 5667778888888888754 221 122233333344455543 3 235567788999999987 432111
Q ss_pred ----------EEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe
Q psy9316 135 ----------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA 204 (264)
Q Consensus 135 ----------~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~ 204 (264)
+..++ +.+..++ ..+.. ..........+..+...++ +.+ ..++.++.+..+|..........
T Consensus 180 ~~~~~d~~g~l~v~t--~~l~~~d--~~g~~--~~~~~~~~~~~~~~~~~~~-g~l-~v~t~~~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS--DKVYAIN--PDGTE--KWNFYAGYWTVTRPAISED-GTI-YVTSLDGHLYAINPDGTEKWRFK 251 (330)
T ss_dssp SCCEECTTCCEEEES--SSEEEEC--TTSCE--EEEECCSSCCCSCCEECTT-SCE-EEEETTTEEEEECTTSCEEEEEE
T ss_pred eeeEEcCCCEEEEEe--CEEEEEC--CCCcE--EEEEccCCcceeceEECCC-CeE-EEEcCCCeEEEECCCCCEeEEee
Confidence 11222 3444444 22211 1112222234666666553 234 44667888888886443332222
Q ss_pred ecC-ceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 205 TKG-ENINITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 205 ~~~-~~~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
... ....+...++| .|.+++.++.+..+|.
T Consensus 252 ~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 252 TGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp CSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred CCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 222 22334555555 5557777888899985
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.74 E-value=2.4 Score=38.59 Aligned_cols=57 Identities=14% Similarity=0.014 Sum_probs=38.2
Q ss_pred CCCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 186 GDKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 186 ~dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
.+|.|..||+.+++..-.. .......-.....+..+++|+.|+.++.||.+++....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW 521 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence 3688999999998753332 22222222223357788889999999999988755443
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.70 E-value=1.7 Score=40.29 Aligned_cols=69 Identities=13% Similarity=0.127 Sum_probs=44.6
Q ss_pred EEEcCCCCCEEEEEeCCC-------------------cEEEEeCCCCcceeEeec-----------CceEEEEEcCCCC-
Q psy9316 171 LCWHATNPDLLSTASGDK-------------------TVRIWDARTQKSQIIATK-----------GENINITWAPNGN- 219 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg-------------------~i~iwD~~t~~~~~~~~~-----------~~~~~v~~sp~g~- 219 (264)
+++.|.. .++..+..++ .|..+|.++++..-.... .......+..+|+
T Consensus 235 ~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 235 MAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp EEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred eEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 5666543 4555666665 499999999885333221 1222233444675
Q ss_pred --EEEEeeCCCeEEEEEcccCCC
Q psy9316 220 --TIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 220 --~la~gs~d~~i~~~d~~~~~~ 240 (264)
.+++++.+|.++++|..++..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEEEECCCCEEEEEECCCCCE
Confidence 789999999999999876543
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.40 E-value=1.8 Score=35.77 Aligned_cols=155 Identities=8% Similarity=0.001 Sum_probs=90.6
Q ss_pred CEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCCC
Q psy9316 53 KVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQK 130 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~~ 130 (264)
....+++++.+..|+.+ ..++.|.+++.+ +.... ......-.....++++|.++.++.+.... +.|...+++...
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~--g~~~~-~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK-TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEE-EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCC--CCceE-EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 45788888766655544 456788888765 22221 12222234567888887665444443222 556666654211
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----c
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----K 206 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~----~ 206 (264)
...++ ......-+.|+++|.++.++.+-...+.|..+|+.......... .
T Consensus 155 -~~~~~-------------------------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 155 -IYSLV-------------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL 208 (316)
T ss_dssp -EEEEE-------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTT
T ss_pred -eEEEE-------------------------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCcc
Confidence 10110 01112345688888776777777778899999998654333322 2
Q ss_pred CceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 207 GENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 207 ~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
..+..+++. .+..+.+-...+.|..+|..+
T Consensus 209 ~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 209 AHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 346677775 355556667788888888644
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.29 E-value=1.9 Score=37.57 Aligned_cols=138 Identities=14% Similarity=0.165 Sum_probs=75.9
Q ss_pred cEEeEEEecC--CCCeEEEEeCCCcEEEEECCCCCcce--------EEEeecCCCcEEEEEeccCCCccceEEEe-----
Q psy9316 98 SVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQKSQI--------MLASGSFDKSVAIFALDKKGDLNKEVVYR----- 162 (264)
Q Consensus 98 ~v~~i~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~--------~~~~~~~d~~i~i~~~~~~~~~~~~~~~~----- 162 (264)
....++|+|+ ++++.+ +...+.|+.+|..++.... .-++-+.++.+.+-+............+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3567888874 334444 4333889999986543221 11222345554443321100000000000
Q ss_pred ------ccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcc-eeEeec---CceEEEEEcCCCCEE-EEeeCCCeEE
Q psy9316 163 ------GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATK---GENINITWAPNGNTI-AVGNKEDLVT 231 (264)
Q Consensus 163 ------~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~-~~~~~~---~~~~~v~~sp~g~~l-a~gs~d~~i~ 231 (264)
.....-..++++|.++.++++-..++.|+.+|..++.. ...... .....++|+|+|++| ++-...+.|+
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 01122345777875667777766788999999986654 222111 123469999999954 5556678999
Q ss_pred EEEcc
Q psy9316 232 FIDVV 236 (264)
Q Consensus 232 ~~d~~ 236 (264)
.+|..
T Consensus 299 ~~~~d 303 (433)
T 4hw6_A 299 RVDYN 303 (433)
T ss_dssp EEEBC
T ss_pred EEeCC
Confidence 98864
No 276
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.21 E-value=0.51 Score=44.10 Aligned_cols=153 Identities=8% Similarity=0.001 Sum_probs=82.0
Q ss_pred EEEEEECCCCCeEEE-EECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCCCc
Q psy9316 54 VHSVAWSCDGRRLAS-GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKS 131 (264)
Q Consensus 54 V~~l~~s~~g~~l~s-~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~~~ 131 (264)
...|++++.+..|+. -...+.|.+++++ +.... .+..........++++|.++.++++-... +.|.+.+++....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~d--g~~~~-~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK-TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 531 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSS--SCCEE-EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecC--CCceE-EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence 456778765544444 3456778887754 22211 11221223345667777555444432222 4555544432111
Q ss_pred ceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----cC
Q psy9316 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----KG 207 (264)
Q Consensus 132 ~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~----~~ 207 (264)
. .+ .......-+.|+++|.++.++++-...+.|..+|+.......... ..
T Consensus 532 ~-~l-------------------------~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~ 585 (699)
T 1n7d_A 532 Y-SL-------------------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 585 (699)
T ss_dssp C-EE-------------------------SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCS
T ss_pred e-EE-------------------------EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCC
Confidence 0 00 000112234688888777788887788899999997644332221 12
Q ss_pred ceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 208 ENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 208 ~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
.+..+++..+ ..+.+....+.|..+|..
T Consensus 586 ~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 586 HPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 3456666554 444555677888888864
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.10 E-value=1.9 Score=34.84 Aligned_cols=141 Identities=11% Similarity=0.215 Sum_probs=80.1
Q ss_pred cccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcce--------------------EEEeecCCCcEEEEEeccCC
Q psy9316 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--------------------MLASGSFDKSVAIFALDKKG 153 (264)
Q Consensus 94 ~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~--------------------~~~~~~~d~~i~i~~~~~~~ 153 (264)
+-...+..++|+|+++.++++...++.|...|.. ++... ++++...++.+.++.+...+
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 3445789999998776677667788888888886 33211 22333344556666665544
Q ss_pred Ccc--ceEEE----eccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCC----CCcceeEee--------cCceEEEEEc
Q psy9316 154 DLN--KEVVY----RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR----TQKSQIIAT--------KGENINITWA 215 (264)
Q Consensus 154 ~~~--~~~~~----~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~----t~~~~~~~~--------~~~~~~v~~s 215 (264)
... ....+ .........++|+|.+..+++ +.+.....+|.+. +........ .....++++.
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v-a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF-FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE-EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEE-EECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 311 11111 112345688999997655555 4454444555443 111111111 1134578898
Q ss_pred CCC-CEEEEeeCCCeEEEEEcc
Q psy9316 216 PNG-NTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 216 p~g-~~la~gs~d~~i~~~d~~ 236 (264)
|.. .+++....+..+..+|..
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT
T ss_pred CCCCeEEEEECCCCeEEEEcCC
Confidence 854 455667777888888854
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.02 E-value=2.9 Score=37.89 Aligned_cols=56 Identities=14% Similarity=0.066 Sum_probs=38.0
Q ss_pred CCCcEEEEeCCCCcceeEe-ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCC
Q psy9316 186 GDKTVRIWDARTQKSQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPP 241 (264)
Q Consensus 186 ~dg~i~iwD~~t~~~~~~~-~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~ 241 (264)
.+|.|..||+.+++..-.. .........+...+..+.+++.|+.++.||..++...
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 4588999999998753332 2222333333445777888999999999998765544
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.01 E-value=2.3 Score=35.40 Aligned_cols=161 Identities=9% Similarity=0.042 Sum_probs=89.0
Q ss_pred CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcc-eE----------EEeecC
Q psy9316 72 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ-IM----------LASGSF 140 (264)
Q Consensus 72 dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~-~~----------~~~~~~ 140 (264)
...|+..+++... ........ .......+.|++.++.+..+-...+.|..++++..... .. ++....
T Consensus 12 ~~~I~~i~l~~~~-~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGK-ENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTT-SCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCc-eEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 4568888776432 11112222 22346688898866666666666888888888754321 11 111112
Q ss_pred CC----------cEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEe-CCCcEEEEeCCCCcceeEee--cC
Q psy9316 141 DK----------SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS-GDKTVRIWDARTQKSQIIAT--KG 207 (264)
Q Consensus 141 d~----------~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~-~dg~i~iwD~~t~~~~~~~~--~~ 207 (264)
++ .|.++++ ++..... ........-..++..|.++.++.+-. ..+.|...++.......... ..
T Consensus 90 ~g~ly~~d~~~~~I~~~~~--dG~~~~~-l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~ 166 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNL--DGSLRKV-LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 166 (318)
T ss_dssp TTEEEEEETTTTEEEEEET--TSCSCEE-EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred CCeEEEEECCCCEEEEEEC--CCCcEEE-EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 22 2333332 2222111 11122233466788776655665542 35788888887654333322 23
Q ss_pred ceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 208 ENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 208 ~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
.+..++++|++..| .+-+..+.|..+|...
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 56789999966655 5556788999999753
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.76 E-value=4.1 Score=37.46 Aligned_cols=157 Identities=10% Similarity=0.059 Sum_probs=92.7
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
..+..|+|+++...|+-+. .++.|..++++. .... .+...-......+++++.++++..+-...+.|.+.+++...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g--~~~~-~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG--SALE-HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC--CCcE-EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 4678999999777776654 567888887653 2111 22222223456777776565566655556777777775432
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE-eCCCcEEEEeCCCCcceeEe-ecCc
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA-SGDKTVRIWDARTQKSQIIA-TKGE 208 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~-~~dg~i~iwD~~t~~~~~~~-~~~~ 208 (264)
.. .++. .....-..|++.|..+.++.+- +..+.|...++......... ....
T Consensus 114 ~~-~l~~-------------------------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~ 167 (628)
T 4a0p_A 114 RQ-VLVW-------------------------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGR 167 (628)
T ss_dssp CE-EEEC-------------------------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSS
T ss_pred EE-EEEe-------------------------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCC
Confidence 11 1110 0111235677777666666554 22567877888765543332 2345
Q ss_pred eEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 209 NINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 209 ~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
+..++++++++.| .+-+..+.|..+|+..
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 7789999876555 4446678888888754
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.50 E-value=3.3 Score=35.59 Aligned_cols=157 Identities=8% Similarity=-0.001 Sum_probs=88.9
Q ss_pred CCEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeC-CCcEEEEECCCC
Q psy9316 52 SKVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-DKTVRIWDARTQ 129 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~-dg~i~vwd~~~~ 129 (264)
.....|++++.+..|+.+ ...+.|.+.+++ +.... .+....-.....++++|.++.++.+-.. .+.|...+++..
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~--g~~~~-~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK-TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTT--TCSEE-EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCC--CCceE-EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 356788888855555544 456778877654 33222 2222233446788888766544443322 355666665432
Q ss_pred CcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----
Q psy9316 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---- 205 (264)
Q Consensus 130 ~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---- 205 (264)
... .++ ......-+.|++++.++.+..+-...+.|..+|+..........
T Consensus 236 ~~~-~~~-------------------------~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~ 289 (400)
T 3p5b_L 236 DIY-SLV-------------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 289 (400)
T ss_dssp SCE-EEE-------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST
T ss_pred ccE-EEE-------------------------ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC
Confidence 111 110 11112345688887776777776778899999997655433322
Q ss_pred cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 206 KGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 206 ~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
...+..++.. .+..+.+....+.|..+|..++
T Consensus 290 l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 290 LAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp TSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred CCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 2346677763 3445555567778888885443
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.90 E-value=4 Score=34.83 Aligned_cols=155 Identities=10% Similarity=0.031 Sum_probs=88.8
Q ss_pred CEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCCC
Q psy9316 53 KVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQK 130 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~~ 130 (264)
....+++++.+..|+.. ...+.|.+++++ +.... ......-.....++++|.++.++.+-... +.|..++++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~d--g~~~~-~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRK-VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTT--SCSCE-EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCC--CCceE-EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 34567888766555544 345667776654 32222 22222334567888887665555443334 566666665321
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ecCc
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TKGE 208 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~~~ 208 (264)
.. .++ ......-+.|+++|.++.++++-...+.|..+|+......... ....
T Consensus 237 ~~-~~~-------------------------~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 237 RR-IIA-------------------------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp CE-EEE-------------------------CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred cE-EEE-------------------------ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence 11 110 0111223568888766677777777889999998765432222 2345
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 209 NINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 209 ~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+..+++. .+..+.+....+.|..+|..+
T Consensus 291 P~giav~-~~~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 291 PFAITVF-EDSLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEE-CCEEEEeeCCCCeEEEEECCC
Confidence 6778873 455556667788888888443
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.87 E-value=3.8 Score=34.45 Aligned_cols=155 Identities=10% Similarity=0.031 Sum_probs=90.8
Q ss_pred CEEEEEECCCCCeEEEE-ECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCCC
Q psy9316 53 KVHSVAWSCDGRRLASG-SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQK 130 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~-s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~~ 130 (264)
....+++++.+..|+.+ ...+.|.+.+++ +.... ......-.....++++|.++.++.+-... +.|...+++...
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~d--G~~~~-~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRK-VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT--SCSCE-EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCC--CCceE-EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 35678888766655544 456788888765 32222 22223334567888888665555544444 666666665321
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe--ecCc
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA--TKGE 208 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~--~~~~ 208 (264)
.. .++ ......-+.|+++|.++.+..+-...+.|..+|+......... ....
T Consensus 194 ~~-~~~-------------------------~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~ 247 (349)
T 3v64_C 194 RR-IIA-------------------------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPH 247 (349)
T ss_dssp CE-ESC-------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSS
T ss_pred cE-EEE-------------------------ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCC
Confidence 11 000 0011234568888877777777777889999998765432222 2345
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 209 NINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 209 ~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+..+++. .+..+.+-...+.|..+|..+
T Consensus 248 P~giav~-~~~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 248 PFAITVF-EDSLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEE-CCEEEEecCCCCeEEEEEccC
Confidence 6777773 455556666778888887433
No 284
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.09 E-value=5.8 Score=34.74 Aligned_cols=152 Identities=11% Similarity=0.132 Sum_probs=87.3
Q ss_pred EEEeecCceEEecccc--ccccccccC----CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCc---------ccE
Q psy9316 26 HLVCKIDDYVKHFNTH--NDIKEYQAH----GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLN---------KEV 90 (264)
Q Consensus 26 ~~~~~~d~~~~~~~~~--~~~~~~~~h----~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~---------~~~ 90 (264)
.++-..++.+|..+.. ..++.+... -+.|..+..+|+|++|+..+. ..|.|..+..+.... ...
T Consensus 34 ~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 34 RIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccccccee
Confidence 3455666777764432 234444332 125788999999999999864 578888775221111 011
Q ss_pred EEec------ccccEEeEEEecCCC--CeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEe
Q psy9316 91 VYRG------HTGSVDQLCWHATNP--DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR 162 (264)
Q Consensus 91 ~~~~------h~~~v~~i~~~~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~ 162 (264)
.+.- ....|..+-|||.+. ..|++-..|+.|++||+....... . +++.... .+-..
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P----------~---~L~k~~~---~fg~d 176 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKP----------I---VLNKPNN---SFGLD 176 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCC----------E---EESCCCS---EEESC
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCC----------c---chhcccc---ccCCC
Confidence 2221 246799999999654 377788999999999998632211 1 2221100 01111
Q ss_pred ccccceeeEEEcCCCCCE-EEEEeCCCcEEEEe
Q psy9316 163 GHTGSVDQLCWHATNPDL-LSTASGDKTVRIWD 194 (264)
Q Consensus 163 ~h~~~i~~i~~~~~~~~~-i~s~~~dg~i~iwD 194 (264)
.....|.+++|.+..-.+ +++...+|-|+-..
T Consensus 177 ~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 177 ARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp SSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred cccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 223567788888743222 33344778777543
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.02 E-value=7.2 Score=35.72 Aligned_cols=184 Identities=8% Similarity=-0.024 Sum_probs=102.9
Q ss_pred CCCEEEEEECCCCCeEEEEEC-CCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCC
Q psy9316 51 GSKVHSVAWSCDGRRLASGSF-DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~-dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~ 129 (264)
-..+..++|++.+..|+-+.. .+.|..++++.. .....+...--.....+++++.+.++..+-...+.|.+.+++..
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~--~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC--CceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 345789999997777776654 567888876532 11112233222457788888766666666667889999998754
Q ss_pred CcceE----------EEeecCCCcEEEEE---------eccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcE
Q psy9316 130 KSQIM----------LASGSFDKSVAIFA---------LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190 (264)
Q Consensus 130 ~~~~~----------~~~~~~d~~i~i~~---------~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i 190 (264)
....+ ++.-..++.+.+-| ...++..... ........-+.|++.+..+.++.+-...+.|
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~-l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI-IINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-EECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE-EEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 32111 12212223333222 2222322211 1111222346788887666777777778899
Q ss_pred EEEeCCCCcceeEe--ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 191 RIWDARTQKSQIIA--TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 191 ~iwD~~t~~~~~~~--~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
..+|+......... ....+..+++..+ ..+.+-..++.|...|..++
T Consensus 196 ~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred EEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 99998765432221 2234566777665 45555567788888887554
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.94 E-value=8.6 Score=36.42 Aligned_cols=157 Identities=8% Similarity=-0.006 Sum_probs=89.1
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQ 129 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~ 129 (264)
.....|++++.++.|+.+. ..+.|.+.+++ +.... .+....-.....|+++|..+.++.+-... +.|...+++..
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld--G~~~~-~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRK-TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEE-EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCC--CCeEE-EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 3456888988776666554 56788888765 33222 22233334577888888655444433222 55666665432
Q ss_pred CcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----
Q psy9316 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---- 205 (264)
Q Consensus 130 ~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~---- 205 (264)
... .++ ......-+.|++.+..+.++.+-...+.|...|+..........
T Consensus 548 ~~~-~lv-------------------------~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~ 601 (791)
T 3m0c_C 548 DIY-SLV-------------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 601 (791)
T ss_dssp CEE-EEE-------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT
T ss_pred ceE-EEE-------------------------eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc
Confidence 111 110 11112345677777666676766677889999987665433322
Q ss_pred cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 206 KGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 206 ~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
......|++.. +..+.+-...+.|...|...+
T Consensus 602 l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 602 LAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TSSEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred cCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence 12456677643 344455566778888875443
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.89 E-value=12 Score=33.26 Aligned_cols=168 Identities=11% Similarity=0.014 Sum_probs=89.4
Q ss_pred CEEEEEE-------CCCCCeEEEEECCC-c------EEEEEeccCCCCcc-c--EEEecccccEEeEEEecCCCCeEEEE
Q psy9316 53 KVHSVAW-------SCDGRRLASGSFDK-S------VAIFALDKKGDLNK-E--VVYRGHTGSVDQLCWHATNPDLLSTA 115 (264)
Q Consensus 53 ~V~~l~~-------s~~g~~l~s~s~dg-~------i~v~~~~~~~~~~~-~--~~~~~h~~~v~~i~~~~~~~~~l~s~ 115 (264)
....|+| +++|+.|+.+...+ . |.+++-...+.... . ..+... .....++.+|.++.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEE
Confidence 4789999 99999777776654 2 44554333223321 0 112211 2345677788776777766
Q ss_pred eCCCcEEEEECC-------CCCcceEEEeecCCCcE-EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCC
Q psy9316 116 SGDKTVRIWDAR-------TQKSQIMLASGSFDKSV-AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187 (264)
Q Consensus 116 s~dg~i~vwd~~-------~~~~~~~~~~~~~d~~i-~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~d 187 (264)
..++.|..+|++ ++..-..... ...+.. .++. ......-..|+|+|.+..++++-...
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~-~~~g~~~~l~~-------------~~~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVK-NNPNTFKQLFT-------------IADPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGG-GCTTTEEEEEE-------------CSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCCCEEEEEecccccccccCceeeccccc-ccccccceeEe-------------cCCCCCceEEEEcCCCCEEEEEeCCC
Confidence 678889888886 3332000000 000000 0010 01112235688888765456666777
Q ss_pred CcEEEEeCC--CCcc---eeEeec----------------CceE-EEEEc-------CCCCEEEEeeCCCeEEEEEc
Q psy9316 188 KTVRIWDAR--TQKS---QIIATK----------------GENI-NITWA-------PNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 188 g~i~iwD~~--t~~~---~~~~~~----------------~~~~-~v~~s-------p~g~~la~gs~d~~i~~~d~ 235 (264)
..|+.+|.. ++.. ...... ..+. .+... ++|.++++-+.++.|+.++.
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 888886543 3221 111110 1233 34444 56777777788888998883
No 288
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.60 E-value=5.2 Score=36.22 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=28.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCcceeEee-cCce--EEEEEcCCCCEEE
Q psy9316 179 DLLSTASGDKTVRIWDARTQKSQIIAT-KGEN--INITWAPNGNTIA 222 (264)
Q Consensus 179 ~~i~s~~~dg~i~iwD~~t~~~~~~~~-~~~~--~~v~~sp~g~~la 222 (264)
.+++.++.||.++.||.++++..-... ...+ .-+.+.++|+.++
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 456668899999999999998644332 2222 2245666776443
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=86.52 E-value=13 Score=31.06 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=40.5
Q ss_pred CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE---EEecccccEEeEEEecC---CCCeEEEEeCC-----Cc
Q psy9316 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV---VYRGHTGSVDQLCWHAT---NPDLLSTASGD-----KT 120 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~---~~~~h~~~v~~i~~~~~---~~~~l~s~s~d-----g~ 120 (264)
.....++|.|+|+.++ +..+|.|.+++ + +...... ++..-......++++|+ +..+.++-... ..
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~-~--g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR-E--GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE-T--TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE-C--CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3567999999998554 45679999887 2 2211100 01111345788899885 33344333322 44
Q ss_pred EEEEECC
Q psy9316 121 VRIWDAR 127 (264)
Q Consensus 121 i~vwd~~ 127 (264)
|..++..
T Consensus 107 v~r~~~~ 113 (352)
T 2ism_A 107 VVRLRHL 113 (352)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 5555554
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.27 E-value=19 Score=31.57 Aligned_cols=158 Identities=12% Similarity=0.167 Sum_probs=86.0
Q ss_pred CCCCeEEEEECCCcEEEEEeccCCCCcccEEEecc----cccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEE
Q psy9316 61 CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH----TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLA 136 (264)
Q Consensus 61 ~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h----~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~ 136 (264)
.+|..|+.+ .++.||.-++...... ..++.. -..+..+..+|.+ .+++. ..+..|.|-.+-.+.....
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Y---k~L~~~~~i~f~~i~qlvlSpsG-~lLAl-~g~~~V~Vv~LP~~~~~~~-- 101 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLY---HSLNFSRHLVLDDTFHVISSTSG-DLLCL-FNDNEIFVMEVPWGYSNVE-- 101 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSC---EEEECTTTCCCCTTCEEEECTTS-SEEEE-ECSSEEEEEECCTTCSCCC--
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcc---eEEecCcccccCceeEEEECCCC-CEEEE-ecCCeEEEEEecCccccCc--
Confidence 466666665 4577776666532222 122221 2246778888855 55554 4566788877752211000
Q ss_pred eecCCCc--EEEEEeccCCCccceEEEeccccceeeEEEcCCC--CCEEEEEeCCCcEEEEeCCCCcc--eeE------e
Q psy9316 137 SGSFDKS--VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN--PDLLSTASGDKTVRIWDARTQKS--QII------A 204 (264)
Q Consensus 137 ~~~~d~~--i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~--~~~i~s~~~dg~i~iwD~~t~~~--~~~------~ 204 (264)
..+.++. ++-|.+.... .....+|..+.|||.. +..|+.-..|+.|++||+..... ... .
T Consensus 102 ~~~~~~~~q~~ty~l~~~~--------~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~f 173 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEE--------VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSF 173 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC----------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEE
T ss_pred ccccccccceeEEEcCCcc--------cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccccc
Confidence 0000011 2233332110 1134689999999963 34677778999999999986221 100 1
Q ss_pred ec----CceEEEEEcCCCCEEEEee--CCCeEEEEE
Q psy9316 205 TK----GENINITWAPNGNTIAVGN--KEDLVTFID 234 (264)
Q Consensus 205 ~~----~~~~~v~~sp~g~~la~gs--~d~~i~~~d 234 (264)
.. ..+.+++|++++-.|.+.+ .+|-|+=+-
T Consensus 174 g~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 174 GLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp ESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred CCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 11 3467889998887665544 666665543
No 291
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.11 E-value=22 Score=32.35 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=38.2
Q ss_pred CCCcEEEEeCCCCcceeEee-cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCCCCC
Q psy9316 186 GDKTVRIWDARTQKSQIIAT-KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242 (264)
Q Consensus 186 ~dg~i~iwD~~t~~~~~~~~-~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~~~ 242 (264)
.+|.+..||+.+++..-... ......-.....+..+.+++.|+.++.||.+++....
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLW 508 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEE
Confidence 45889999999987533322 2222221233467788889999999999988765544
No 292
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=84.34 E-value=17 Score=30.41 Aligned_cols=53 Identities=9% Similarity=0.070 Sum_probs=31.8
Q ss_pred CEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCccc-----EEEecccccEEeEEEecC
Q psy9316 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE-----VVYRGHTGSVDQLCWHAT 107 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~-----~~~~~h~~~v~~i~~~~~ 107 (264)
....|+|.|+|++|+.+...|.|.+++.+ +..... .+...-......++++|+
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCC
Confidence 45789999999945555678999988732 211100 011111234578888885
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.33 E-value=24 Score=32.17 Aligned_cols=157 Identities=9% Similarity=0.023 Sum_probs=87.3
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
..+.+++|++.+..|+-+. ..+.|..++.+. ... ..+....-.....+++...+.++..+-+..+.|.+.+++...
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g--~~~-~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDG--SGS-QFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSC-EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCC--Ccc-EEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 3578899998666666554 467788877653 211 122322234556777776555566665567777777776432
Q ss_pred cceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeC-CCcEEEEeCCCCcceeEee--cC
Q psy9316 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-DKTVRIWDARTQKSQIIAT--KG 207 (264)
Q Consensus 131 ~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~-dg~i~iwD~~t~~~~~~~~--~~ 207 (264)
. ..++. .....-..|++.|..+.++.+-.. .+.|.-.++.......... ..
T Consensus 426 ~-~~l~~-------------------------~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~ 479 (619)
T 3s94_A 426 R-KILIS-------------------------EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLG 479 (619)
T ss_dssp C-EEEEC-------------------------TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred E-EEEEE-------------------------CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCC
Confidence 1 11110 011223456677755555555322 3566666665543322222 23
Q ss_pred ceEEEEEcCCCCEEEE-eeCCCeEEEEEccc
Q psy9316 208 ENINITWAPNGNTIAV-GNKEDLVTFIDVVK 237 (264)
Q Consensus 208 ~~~~v~~sp~g~~la~-gs~d~~i~~~d~~~ 237 (264)
.+..+++++++..|.. -+..+.|..+++..
T Consensus 480 ~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 480 WPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred CCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 5677888876555544 45567788887643
No 294
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=83.55 E-value=19 Score=30.23 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=31.5
Q ss_pred CCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEE---ecccccEEeEEEecC
Q psy9316 52 SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY---RGHTGSVDQLCWHAT 107 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~---~~h~~~v~~i~~~~~ 107 (264)
.....++|.|+|+.++ +..+|.|.+++ ..+. .....+ ..-......++++|+
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d--~~G~-~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS--PSGK-KLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC--SSCE-EEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe--CCCc-eEeeccceeecCCCceeeEEeCCC
Confidence 3567899999998554 45679998885 2232 111111 111245788899885
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=82.81 E-value=26 Score=31.86 Aligned_cols=53 Identities=15% Similarity=0.077 Sum_probs=34.4
Q ss_pred CcEEEEeCCCCcceeEeec--C---------ceEEEEEc-CCC---CEEEEeeCCCeEEEEEcccCCC
Q psy9316 188 KTVRIWDARTQKSQIIATK--G---------ENINITWA-PNG---NTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 188 g~i~iwD~~t~~~~~~~~~--~---------~~~~v~~s-p~g---~~la~gs~d~~i~~~d~~~~~~ 240 (264)
++|..+|.++++..-.... . ...-+... .+| +.++.++.+|.++.+|..++..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 3789999999875332211 1 11122332 577 5678889999999999876543
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=81.98 E-value=31 Score=31.58 Aligned_cols=183 Identities=9% Similarity=0.006 Sum_probs=102.7
Q ss_pred CCEEEEEECCCCCeEEEEE-CCCcEEEEEeccCCCCcccEEEec------ccccEEeEEEecCCCCeEEEEeCCCcEEEE
Q psy9316 52 SKVHSVAWSCDGRRLASGS-FDKSVAIFALDKKGDLNKEVVYRG------HTGSVDQLCWHATNPDLLSTASGDKTVRIW 124 (264)
Q Consensus 52 ~~V~~l~~s~~g~~l~s~s-~dg~i~v~~~~~~~~~~~~~~~~~------h~~~v~~i~~~~~~~~~l~s~s~dg~i~vw 124 (264)
..+.+|+|++..+.|+-+. ..+.|..++.+ +.... .++.. ....+..+++...+.++..+-+..+.|.+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~--g~~~~-~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQED--GSQGF-TVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVT 416 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCE-EEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcC--CCCce-EEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEE
Confidence 4688999999777776654 45678777654 22211 12221 223577888877665566666667778777
Q ss_pred ECCCCCc----------ceEEEeecCCCcE----------EEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE
Q psy9316 125 DARTQKS----------QIMLASGSFDKSV----------AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA 184 (264)
Q Consensus 125 d~~~~~~----------~~~~~~~~~d~~i----------~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~ 184 (264)
+++.... ..-++.-...|.+ +|+...+++...... ....-..-+.|++.+....+..+-
T Consensus 417 ~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l-~~~~l~~P~gla~D~~~~~LYw~D 495 (628)
T 4a0p_A 417 RLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVL-FFSGLSKPIALALDSRLGKLFWAD 495 (628)
T ss_dssp ETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEE-ECSSCSCEEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEE-EeccCCCccEEEEeCCCCEEEEEe
Confidence 7753211 1111221112222 344333444332211 121122346688877655666666
Q ss_pred eCCCcEEEEeCCCCcceeEe--ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 185 SGDKTVRIWDARTQKSQIIA--TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 185 ~~dg~i~iwD~~t~~~~~~~--~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
+..+.|...|+......... ....+..++... +..+.+-...+.|...|...+.
T Consensus 496 ~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 496 SDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGRE 551 (628)
T ss_dssp TTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSS
T ss_pred CCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCC
Confidence 66789999999765543332 234567777654 5555666677788888866443
No 297
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=81.75 E-value=30 Score=31.29 Aligned_cols=49 Identities=24% Similarity=0.385 Sum_probs=32.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCcceeEee-cCceE--EEEEcCCCC-EEEEeeC
Q psy9316 178 PDLLSTASGDKTVRIWDARTQKSQIIAT-KGENI--NITWAPNGN-TIAVGNK 226 (264)
Q Consensus 178 ~~~i~s~~~dg~i~iwD~~t~~~~~~~~-~~~~~--~v~~sp~g~-~la~gs~ 226 (264)
+.+++.++.||.++.||.++++..-... ...+. -+.|..+|+ |+++.+.
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 3466678999999999999998644332 33232 266777786 5555443
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=81.41 E-value=27 Score=30.51 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=30.9
Q ss_pred CEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec------ccccEEeEEEecC
Q psy9316 53 KVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG------HTGSVDQLCWHAT 107 (264)
Q Consensus 53 ~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~------h~~~v~~i~~~~~ 107 (264)
....|+|.|+|+.+++-...+.|.+++.. .+.......+.. -......++|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPE-SGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECC-CCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 56799999999877765333467777532 122211111111 1234668999885
No 299
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=80.79 E-value=37 Score=31.69 Aligned_cols=154 Identities=8% Similarity=0.058 Sum_probs=88.9
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe---------cccccEEeEEEecCCCCeEEEEeCCCcE
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR---------GHTGSVDQLCWHATNPDLLSTASGDKTV 121 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~---------~h~~~v~~i~~~~~~~~~l~s~s~dg~i 121 (264)
...|.++..+++|..- .|+.++-|..|+... +... .+. -....|.++...+++ +++-.|+.++-+
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~-~~~~---~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl 429 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPIT-QRFT---SYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGL 429 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTT-CCEE---EECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEE
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCC-CcEE---EEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCce
Confidence 3469999999888754 466776788886542 1111 111 013468888776533 425567777778
Q ss_pred EEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcce
Q psy9316 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 201 (264)
Q Consensus 122 ~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~ 201 (264)
..+|.++++... +... ... .....|.++...+. +.+.+. +. +-+..||..+++..
T Consensus 430 ~~~d~~~~~~~~-------------~~~~-~~~--------l~~~~v~~i~~d~~-g~lwig-t~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 430 SILHRNSGQVEN-------------FNQR-NSQ--------LVNENVYAILPDGE-GNLWLG-TL-SALVRFNPEQRSFT 484 (795)
T ss_dssp EEEETTTCCEEE-------------ECTT-TSC--------CSCSCEEEEEECSS-SCEEEE-ES-SCEEEEETTTTEEE
T ss_pred eEEeCCCCcEEE-------------eecC-CCC--------cCCCeeEEEEECCC-CCEEEE-ec-CceeEEeCCCCeEE
Confidence 889987654211 1000 000 11245777776653 345443 34 45888998876542
Q ss_pred eEee--------cCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 202 IIAT--------KGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 202 ~~~~--------~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.... ...+.++...++|+..+... + -+..||..+
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~ 526 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEG 526 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEET
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCC
Confidence 2211 13467788888888765444 4 467788654
No 300
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.46 E-value=1.6 Score=36.93 Aligned_cols=111 Identities=10% Similarity=0.164 Sum_probs=62.1
Q ss_pred CeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEE-eCCC
Q psy9316 110 DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTA-SGDK 188 (264)
Q Consensus 110 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~-~~dg 188 (264)
.+++.++.||.+.-.|.++++.. |..+.. ............ .+.++..++.. +.||
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~--------------W~~~~~-~~~p~~~~~~~~--------~~~~~~~~vv~p~~dG 67 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHII--------------WSIEPE-NFQPLIEIQEPS--------RLETYETLIIEPFGDG 67 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEE--------------EEECGG-GSCCSEECCCSC--------TTTSSEEEEECCSTTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEE--------------EEecCC-ccCCcEEecCCc--------cccCCcEEEEEECCCC
Confidence 36778899999999998877643 544322 001111111000 01122343333 5899
Q ss_pred cEEEEeCCCCcceeEee-cCceEE--EEEc-------C----CCCEEEEeeCCCeEEEEEcccCCCCCC
Q psy9316 189 TVRIWDARTQKSQIIAT-KGENIN--ITWA-------P----NGNTIAVGNKEDLVTFIDVVKSLPPRE 243 (264)
Q Consensus 189 ~i~iwD~~t~~~~~~~~-~~~~~~--v~~s-------p----~g~~la~gs~d~~i~~~d~~~~~~~~~ 243 (264)
.+..+|.+++....... +..+.. +... + .+..+.+|+.++.++-+|+.++...++
T Consensus 68 ~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 68 NIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp EEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 99999998875332221 111100 1110 1 466888999999999999887666554
No 301
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=79.27 E-value=25 Score=28.84 Aligned_cols=66 Identities=9% Similarity=0.125 Sum_probs=35.6
Q ss_pred EEECCCCCeEEEEE--CCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC
Q psy9316 57 VAWSCDGRRLASGS--FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128 (264)
Q Consensus 57 l~~s~~g~~l~s~s--~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~ 128 (264)
..|++++++|+-.. .++.-.+|-++..+.... .+..+.. ..+++.+..+..+......|.+-+++.
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~--~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK--KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE--EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE--EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 36778899888776 456666676665553222 2222222 234454544444433355666666654
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=77.55 E-value=28 Score=28.54 Aligned_cols=155 Identities=6% Similarity=-0.004 Sum_probs=77.5
Q ss_pred cCCCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCC
Q psy9316 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128 (264)
Q Consensus 49 ~h~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~ 128 (264)
.+...+..+.+.+++.+++.+ .+|.+..-. +..+..-.. .-......+..+.+.+.+ .++ .++.+|.+++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~-d~gG~tW~~-~~~~~~~~~~~~~~~~~g-~~~-~~~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVS-SRGSFYSTW-EPGQTAWEP-HNRTTSRRLHNMGFTPDG-RLW-MIVNGGKIAFSDPDN 234 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEE-TTSSEEEEE-CTTCSSCEE-EECCSSSCEEEEEECTTS-CEE-EEETTTEEEEEETTE
T ss_pred CCCcceEEEEEcCCCcEEEEE-CCCcEEEEe-CCCCCceeE-CCCCCCCccceeEECCCC-CEE-EEeCCceEEEecCCC
Confidence 445578899999988877665 455543321 211221111 112334557777776644 443 455677766653221
Q ss_pred CCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe----
Q psy9316 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA---- 204 (264)
Q Consensus 129 ~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~---- 204 (264)
++ -|.......+ .+...+..+.+.+. ..+++. +.+|.+. +....++.-...
T Consensus 235 G~---------------tW~~~~~~~~-------~~~~~~~~v~~~~~-~~~~~~-g~~g~i~-~S~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 235 SE---------------NWGELLSPLR-------RNSVGFLDLAYRTP-NEVWLA-GGAGALL-CSQDGGQTWQQDVDVK 289 (327)
T ss_dssp EE---------------EECCCBCTTS-------SCCSCEEEEEESSS-SCEEEE-ESTTCEE-EESSTTSSCEECGGGT
T ss_pred CC---------------eeEeccCCcc-------cCCcceEEEEecCC-CEEEEE-eCCCeEE-EeCCCCcccEEcCccC
Confidence 11 1110000000 01124677777763 455554 4577773 333333322111
Q ss_pred -ecCceEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy9316 205 -TKGENINITWAPNGNTIAVGNKEDLVTFID 234 (264)
Q Consensus 205 -~~~~~~~v~~sp~g~~la~gs~d~~i~~~d 234 (264)
......++.|.++++.+++ +.+|.+.-++
T Consensus 290 ~~~~~~~~v~~~~~~~~~~~-G~~G~i~~~~ 319 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQGFIL-GQKGILLRYV 319 (327)
T ss_dssp TSSSCCCEEEEEETTEEEEE-CSTTEEEEEC
T ss_pred CCCCCeEEEEEECCCceEEE-cCCceEEEEc
Confidence 1234567888766665555 4588877665
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=75.66 E-value=28 Score=27.57 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=59.4
Q ss_pred ccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEe-ccccceeeEEEcC
Q psy9316 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR-GHTGSVDQLCWHA 175 (264)
Q Consensus 97 ~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~-~h~~~i~~i~~~~ 175 (264)
..+.+++|+| +..+.+. .+|.++-.+..+......+.++ ...-. +-. ...++.|.|
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~-------------------t~IG~~Gw~-~F~a~~fD~ 97 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRA-------------------KKIGNGGWN-QFQFLFFDP 97 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHC-------------------EEEECSCGG-GCSEEEECT
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccc-------------------cEecccccc-cceEEEECC
Confidence 3677999999 4454443 6777666665443322211000 00000 111 135677776
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcce------eEeec---CceEEEEEcCCCCEEEEeeCCCeEE
Q psy9316 176 TNPDLLSTASGDKTVRIWDARTQKSQ------IIATK---GENINITWAPNGNTIAVGNKEDLVT 231 (264)
Q Consensus 176 ~~~~~i~s~~~dg~i~iwD~~t~~~~------~~~~~---~~~~~v~~sp~g~~la~gs~d~~i~ 231 (264)
+ +.+.++ .||.|+=++..+.... ..... .....|.+.|+|...|+. |+.++
T Consensus 98 ~-G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 98 N-GYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp T-SCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred C-CCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 4 455554 5799988876443211 11111 346789999999999888 66543
No 304
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=74.06 E-value=56 Score=30.31 Aligned_cols=155 Identities=11% Similarity=0.070 Sum_probs=85.5
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEe---cccccEEeEEEecCCCCeEEEEeCCCcEEEEECC
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR---GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~---~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~ 127 (264)
...|.++...++|...+ |+.++-+..++... +.. ..+. .....|.++...+++ .+-.|+. +-+..+|.+
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~-~~~---~~~~~~~~~~~~v~~i~~d~~g--~lwigt~-~Gl~~~~~~ 477 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRL-KKF---QIIELEKNELLDVRVFYEDKNK--KIWIGTH-AGVFVIDLA 477 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSS-CEE---EECCSTTTCCCCEEEEEECTTS--EEEEEET-TEEEEEESS
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCC-CcE---EEeccCCCCCCeEEEEEECCCC--CEEEEEC-CceEEEeCC
Confidence 46799999888877554 56666677776432 111 1111 123467777765433 3444555 457778876
Q ss_pred CCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee--
Q psy9316 128 TQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-- 205 (264)
Q Consensus 128 ~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~-- 205 (264)
+++..... . ..... .....|.++...+. +.+.+ |+.++-+..||..+++......
T Consensus 478 ~~~~~~~~-~------------~~~~~--------~~~~~i~~i~~d~~-g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~ 534 (781)
T 3v9f_A 478 SKKVIHHY-D------------TSNSQ--------LLENFVRSIAQDSE-GRFWI-GTFGGGVGIYTPDMQLVRKFNQYE 534 (781)
T ss_dssp SSSCCEEE-C------------TTTSS--------CSCSCEEEEEECTT-CCEEE-EESSSCEEEECTTCCEEEEECTTT
T ss_pred CCeEEecc-c------------Ccccc--------cccceeEEEEEcCC-CCEEE-EEcCCCEEEEeCCCCeEEEccCCC
Confidence 54322110 0 00000 01245777777654 34544 4444457789887765332221
Q ss_pred ---cCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 206 ---KGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 206 ---~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
...+.++...++|+..+. +.+|.+..||..+
T Consensus 535 ~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 535 GFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARN 568 (781)
T ss_dssp TCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTT
T ss_pred CCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCC
Confidence 234677888888886654 4477768888654
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=73.11 E-value=42 Score=28.39 Aligned_cols=181 Identities=13% Similarity=0.198 Sum_probs=89.3
Q ss_pred ceEEeccc-cccccccccCCCCEEEEEECCC----CCe--EEEEE-C---CCcEEEEEeccCC-CCcccEE----Eeccc
Q psy9316 33 DYVKHFNT-HNDIKEYQAHGSKVHSVAWSCD----GRR--LASGS-F---DKSVAIFALDKKG-DLNKEVV----YRGHT 96 (264)
Q Consensus 33 ~~~~~~~~-~~~~~~~~~h~~~V~~l~~s~~----g~~--l~s~s-~---dg~i~v~~~~~~~-~~~~~~~----~~~h~ 96 (264)
+=+..|+. ++.+..+.. +.++-+..-|+ |+. |+.++ . +++|.+|+++... .+..... ...-.
T Consensus 50 ~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAI 127 (355)
T ss_dssp TEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCC
T ss_pred CCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCC
Confidence 33455554 344444432 45565555442 332 33333 3 4789999885321 1111000 00111
Q ss_pred ccEEeEEE--ecCCCC-eEEEEeCCCcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEE
Q psy9316 97 GSVDQLCW--HATNPD-LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173 (264)
Q Consensus 97 ~~v~~i~~--~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~ 173 (264)
..+..+|. ++..+. +++....+|.+..|++..... +.+.- .. ...+.- .+.+..+..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~----------g~~~~-------~l--VR~f~l-gsq~Egcvv 187 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN----------GYISG-------KK--VRAFKM-NSQTEGMAA 187 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT----------SCEEE-------EE--EEEEEC-SSCEEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC----------Ccccc-------eE--EEEecC-CCCcceEEE
Confidence 45666777 554433 566777788888888742111 00000 00 001111 123445555
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCc---ceeE-e--ec---CceEEEEE--cCCCC-EEEEee-CCCeEEEEEcc
Q psy9316 174 HATNPDLLSTASGDKTVRIWDARTQK---SQII-A--TK---GENINITW--APNGN-TIAVGN-KEDLVTFIDVV 236 (264)
Q Consensus 174 ~~~~~~~i~s~~~dg~i~iwD~~t~~---~~~~-~--~~---~~~~~v~~--sp~g~-~la~gs-~d~~i~~~d~~ 236 (264)
.+.. ..|..+-++.-|..+|.+... .... . .. ..+..+++ .++|+ ||++.+ .++...+||..
T Consensus 188 Dd~~-g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 188 DDEY-GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTT-TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cCCC-CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 5543 455567787667777755221 1111 1 11 23556766 56777 777776 56799999975
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=70.22 E-value=47 Score=27.80 Aligned_cols=161 Identities=11% Similarity=0.103 Sum_probs=87.3
Q ss_pred CceEeecCCCeeEEEeecCceEEecccc-cc-cc-cccc----CC--CCEEEEEE---CCCCCeEEEEEC----------
Q psy9316 14 PEYKLLPSGSQFHLVCKIDDYVKHFNTH-ND-IK-EYQA----HG--SKVHSVAW---SCDGRRLASGSF---------- 71 (264)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~-~~-~~~~----h~--~~V~~l~~---s~~g~~l~s~s~---------- 71 (264)
....+.+....|..+--..+.|..++.. .. .. .+.+ .. ..+..|.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3346778777765554467888777654 21 11 2221 11 13689999 688777665331
Q ss_pred ---CCcEEEEEec---cCCCCcccEEEeccc-----------ccEEeEEEecCCCCeEEEEeCC-CcEEEEECCCCCcce
Q psy9316 72 ---DKSVAIFALD---KKGDLNKEVVYRGHT-----------GSVDQLCWHATNPDLLSTASGD-KTVRIWDARTQKSQI 133 (264)
Q Consensus 72 ---dg~i~v~~~~---~~~~~~~~~~~~~h~-----------~~v~~i~~~~~~~~~l~s~s~d-g~i~vwd~~~~~~~~ 133 (264)
+..+..||+. +...... ..+.... ....++...+++ +..++++.- +.|...+.+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~pdG~---- 169 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVSADGK---- 169 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEECTTSC----
T ss_pred cCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEeCCCC----
Confidence 5668888876 3222211 1111111 236677777654 444455544 54444443321
Q ss_pred EEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q psy9316 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198 (264)
Q Consensus 134 ~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~ 198 (264)
.+..|.+.... .......+.|.++|++..+++..+ .|.+..+|+...
T Consensus 170 ---------~~~~~~~~~~~--------~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 ---------TVSTFAWESGN--------GGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp ---------CEEEEEECCCC--------SSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred ---------EEeeeeecCCC--------cccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 23344432211 011234677899997655555545 999999999853
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=70.09 E-value=40 Score=26.88 Aligned_cols=60 Identities=23% Similarity=0.326 Sum_probs=34.0
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcceeEee-c-C-ceEEEEEcCCCCEEEEeeCCC-----eEEEEEccc
Q psy9316 177 NPDLLSTASGD-----KTVRIWDARTQKSQIIAT-K-G-ENINITWAPNGNTIAVGNKED-----LVTFIDVVK 237 (264)
Q Consensus 177 ~~~~i~s~~~d-----g~i~iwD~~t~~~~~~~~-~-~-~~~~v~~sp~g~~la~gs~d~-----~i~~~d~~~ 237 (264)
++.+++.|+.+ ..+.+||+++.+=..... + . ....++. -+++.++.|+.++ .+.+||+.+
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 34566666654 478899998865222211 1 1 1112222 2677778877553 488999764
No 308
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=68.21 E-value=76 Score=29.41 Aligned_cols=178 Identities=14% Similarity=0.031 Sum_probs=90.1
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEE------------EecccccEEeEEEecCCCCeEEEEeCC
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV------------YRGHTGSVDQLCWHATNPDLLSTASGD 118 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~------------~~~h~~~v~~i~~~~~~~~~l~s~s~d 118 (264)
...|.++...++|...+ |+..+-|.+++..... ...... ..-....|.++...+.+ .+-.|+.+
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQ-FLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC----------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBS
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCe-eeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecC
Confidence 35699999988877554 5554557777754321 111000 00123468888776544 34456766
Q ss_pred CcEEEEECCCCCcce------------------E---------EEeecCCCcEEEEEeccCCCccceEE-Eeccccceee
Q psy9316 119 KTVRIWDARTQKSQI------------------M---------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQ 170 (264)
Q Consensus 119 g~i~vwd~~~~~~~~------------------~---------~~~~~~d~~i~i~~~~~~~~~~~~~~-~~~h~~~i~~ 170 (264)
+-|..++.+...... . +-.|+.++-+..++.... ....... .......|.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKR-VAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEE-EEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCC-eEEEccCCCCCCCcceEE
Confidence 667777765332110 0 111222223333332110 0000000 0112245777
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----cCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----KGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~----~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
+...+. +.+.+ |+.++-+..+|..+++...... ...+.++...++|+.++ |+. +-+..+|..+
T Consensus 412 i~~d~~-g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~ 478 (781)
T 3v9f_A 412 SLKDSE-GNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS 478 (781)
T ss_dssp EEECTT-SCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSS
T ss_pred EEECCC-CCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCC
Confidence 776543 34544 5666778999988765432221 23567777787777554 454 5578888664
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=66.41 E-value=47 Score=26.36 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=33.7
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcceeEee-c-C-ceEEEEEcCCCCEEEEeeCC-----CeEEEEEccc
Q psy9316 177 NPDLLSTASGD-----KTVRIWDARTQKSQIIAT-K-G-ENINITWAPNGNTIAVGNKE-----DLVTFIDVVK 237 (264)
Q Consensus 177 ~~~~i~s~~~d-----g~i~iwD~~t~~~~~~~~-~-~-~~~~v~~sp~g~~la~gs~d-----~~i~~~d~~~ 237 (264)
++.+++.|+.+ ..+.+||+++.+-..... + . ...++.. -+++.++.|+.+ ..+..||+.+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 34566666653 578999998875322211 1 1 1112222 267777777655 4578888754
No 310
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=65.72 E-value=86 Score=29.11 Aligned_cols=174 Identities=9% Similarity=0.130 Sum_probs=95.2
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccEEEec--------ccccEEeEEEecCCCCeEEEEeCCCcEE
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG--------HTGSVDQLCWHATNPDLLSTASGDKTVR 122 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~~~~~--------h~~~v~~i~~~~~~~~~l~s~s~dg~i~ 122 (264)
...|.++...+++.+.+ |+.++-+..|+.... ... .+.. ....|.++...+++ . +-.|+.+ -+.
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~-~~~---~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~-Gl~ 285 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTK-EIK---NYLHSPSNPKSISSNYIRSLAMDSQN-R-LWIGTFN-DLN 285 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTT-EEE---EECCCTTCTTSCSCSBEEEEEECTTS-C-EEEEESS-CEE
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCC-eEE---EeecCCCCccccCCCeEEEEEEcCCC-C-EEEEeCC-hhh
Confidence 45688888887776554 444444777775421 111 1111 13458888776544 3 4345555 477
Q ss_pred EEECCCCCcce----------------E---------EEeecCCCcEEEEEeccCCCccceEEEec-------cccceee
Q psy9316 123 IWDARTQKSQI----------------M---------LASGSFDKSVAIFALDKKGDLNKEVVYRG-------HTGSVDQ 170 (264)
Q Consensus 123 vwd~~~~~~~~----------------~---------~~~~~~d~~i~i~~~~~~~~~~~~~~~~~-------h~~~i~~ 170 (264)
+||..+.+... . +-.|+.++-+..++.... .. ..+.. ....|.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~-~~---~~~~~~~~~~~l~~~~V~~ 361 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN-RF---KNIRNIPYKNSLSDNVVSC 361 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG-SS---EEECCCTTSSSCSCSSEEE
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc-cc---eEEcCCCCCCCCCCCeeEE
Confidence 78865432110 0 112333333444432211 01 11110 1235788
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEee----------cCceEEEEEcCCCCEEEEeeCCCeEEEEEcccC
Q psy9316 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----------KGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~----------~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~~ 238 (264)
+...+. +.+. .|+.++-|..||..++....... ...+.++...++|+.|-+|+.++-+..||..++
T Consensus 362 i~~d~~-g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 362 IVEDKD-KNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEECTT-SCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred EEECCC-CCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 877653 3444 36777789999998765432211 234677888888885667787777899997653
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=65.64 E-value=61 Score=27.37 Aligned_cols=96 Identities=6% Similarity=0.103 Sum_probs=57.5
Q ss_pred CCcEEEEEeccCCC-ccceEE----EeccccceeeEEE--cCCCCC-EEEEEeCCCcEEEEeCC---CCcc--e---eEe
Q psy9316 141 DKSVAIFALDKKGD-LNKEVV----YRGHTGSVDQLCW--HATNPD-LLSTASGDKTVRIWDAR---TQKS--Q---IIA 204 (264)
Q Consensus 141 d~~i~i~~~~~~~~-~~~~~~----~~~h~~~i~~i~~--~~~~~~-~i~s~~~dg~i~iwD~~---t~~~--~---~~~ 204 (264)
+.++.+|+++.... +..... ...-...++.+|+ +|..+. +++....+|.+..|++. .+.. . ...
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 57889998853222 111100 0000134566777 665443 45566788999999883 2221 1 112
Q ss_pred ecCceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q psy9316 205 TKGENINITWAPNGNTIAVGNKEDLVTFIDVV 236 (264)
Q Consensus 205 ~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~ 236 (264)
....+..+...+....|.++-.+.-|-.||..
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred CCCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 24557788899999999999988776666644
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=62.58 E-value=25 Score=27.88 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=41.6
Q ss_pred ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecC-ce--------EEEEEcCCCCEEEEeeCCCeEEEEEc
Q psy9316 167 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG-EN--------INITWAPNGNTIAVGNKEDLVTFIDV 235 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~-~~--------~~v~~sp~g~~la~gs~d~~i~~~d~ 235 (264)
.+..++|+| ++.+.+. .+|.++-.+..+.....-.... .+ -.+-|.|+|.+.++ .||.|+-++.
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 567899999 5555554 6777777777653321110011 11 36789999999988 5698887774
No 313
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=61.51 E-value=65 Score=26.25 Aligned_cols=61 Identities=3% Similarity=0.086 Sum_probs=33.7
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCcceeEeecCceEEEEEcCCCCEEEEeeCC--CeEEEEEcc
Q psy9316 174 HATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKE--DLVTFIDVV 236 (264)
Q Consensus 174 ~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~~~~~~~~v~~sp~g~~la~gs~d--~~i~~~d~~ 236 (264)
++.+..+..+...+..|...++......... .+.. ...++|++.+|+-...+ ..|...++.
T Consensus 153 ~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~-~~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 153 NTSDRYFYYNNPKNGQLYRYDTASQSEALFY-DCNC-YKPVVLDDTNVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp EEETTEEEEECTTTCCEEEEETTTTEEEEEE-CSCE-EEEEEEETTEEEEEEGGGTTEEEEECSS
T ss_pred eEECCEEEEEeCCCceEEEEECCCCCEEEEe-CCCc-cceeeecCCEEEEEEcCCCcEEEEEECC
Confidence 3444455555445678888888776543332 2222 23355888887665433 245555544
No 314
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=59.20 E-value=72 Score=26.00 Aligned_cols=66 Identities=14% Similarity=0.266 Sum_probs=37.1
Q ss_pred cceeeEEEcCCCCCEEEEEeCCCcEEE-EeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy9316 166 GSVDQLCWHATNPDLLSTASGDKTVRI-WDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFID 234 (264)
Q Consensus 166 ~~i~~i~~~~~~~~~i~s~~~dg~i~i-wD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d 234 (264)
..+..+.+.|. ..+++.+ .+|.+.. .|-....-... ........+.++|+++.++++ .++.+++.+
T Consensus 163 ~~~~~~~~~~~-~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~ 231 (327)
T 2xbg_A 163 GVMRNLNRSPS-GEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSD 231 (327)
T ss_dssp CCEEEEEECTT-SCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEE
T ss_pred cceEEEEEcCC-CcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEec
Confidence 45677888774 4555544 4555544 34311111111 123356778899998877554 477777663
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=59.14 E-value=66 Score=25.58 Aligned_cols=58 Identities=3% Similarity=0.053 Sum_probs=32.5
Q ss_pred CCEEEEEeCC-----CcEEEEeCCCCcceeEe-ec---CceEEEEEcCCCCEEEEeeCC-----CeEEEEEccc
Q psy9316 178 PDLLSTASGD-----KTVRIWDARTQKSQIIA-TK---GENINITWAPNGNTIAVGNKE-----DLVTFIDVVK 237 (264)
Q Consensus 178 ~~~i~s~~~d-----g~i~iwD~~t~~~~~~~-~~---~~~~~v~~sp~g~~la~gs~d-----~~i~~~d~~~ 237 (264)
+.+++.|+.+ ..+.+||+.+.+=.... .+ .....+.+ +++.+++|+.+ ..+..||+.+
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 4466665543 46889999886521111 11 11122223 67777887743 5688898764
No 316
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=50.63 E-value=90 Score=25.44 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=22.6
Q ss_pred cEEEEeCCCCcceeEe-ecC-ceEEEEEcCCCCEEEEeeCCC------eEEEEEccc
Q psy9316 189 TVRIWDARTQKSQIIA-TKG-ENINITWAPNGNTIAVGNKED------LVTFIDVVK 237 (264)
Q Consensus 189 ~i~iwD~~t~~~~~~~-~~~-~~~~v~~sp~g~~la~gs~d~------~i~~~d~~~ 237 (264)
.+.+||+++.+=.... .+. .....+...+++.++.|+.++ .+.++++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKD 342 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-C
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcC
Confidence 5788999876522221 111 111112234677778887543 245556553
No 317
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.79 E-value=87 Score=30.20 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=24.6
Q ss_pred cEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 98 ~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
.+.++...+ +..++++-+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCC
Confidence 355555554 44688899999999999998865
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=49.38 E-value=95 Score=24.49 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=33.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcceeEee-cC-c-eEEEEEcCCCCEEEEeeCC-----CeEEEEEccc
Q psy9316 177 NPDLLSTASGD-----KTVRIWDARTQKSQIIAT-KG-E-NINITWAPNGNTIAVGNKE-----DLVTFIDVVK 237 (264)
Q Consensus 177 ~~~~i~s~~~d-----g~i~iwD~~t~~~~~~~~-~~-~-~~~v~~sp~g~~la~gs~d-----~~i~~~d~~~ 237 (264)
++.+++.|+.+ ..+.+||+.+.+=..... +. . ..+++. -+++.++.|+.+ ..+..||+.+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 34566666544 468899998865322211 11 1 112222 256777777654 4588899764
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=46.96 E-value=1.1e+02 Score=24.41 Aligned_cols=60 Identities=22% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCcceeEe-ecC--ceEEEEEcCCCCEEEEeeCC-----CeEEEEEccc
Q psy9316 177 NPDLLSTASGD-----KTVRIWDARTQKSQIIA-TKG--ENINITWAPNGNTIAVGNKE-----DLVTFIDVVK 237 (264)
Q Consensus 177 ~~~~i~s~~~d-----g~i~iwD~~t~~~~~~~-~~~--~~~~v~~sp~g~~la~gs~d-----~~i~~~d~~~ 237 (264)
+..+++.|+.+ ..+.+||+.+.+=.... .+. ...+++. -+++.++.|+.+ ..+.+||+.+
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 34566666554 56899999886522111 111 1112222 257777777643 4578888764
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=46.33 E-value=1.3e+02 Score=25.15 Aligned_cols=56 Identities=13% Similarity=0.030 Sum_probs=34.0
Q ss_pred CCCEEEEEECCCCCeEEEEECCCcEEEEEeccCCCCcccE----EEecccccEEeEEEecC
Q psy9316 51 GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV----VYRGHTGSVDQLCWHAT 107 (264)
Q Consensus 51 ~~~V~~l~~s~~g~~l~s~s~dg~i~v~~~~~~~~~~~~~----~~~~h~~~v~~i~~~~~ 107 (264)
-.....|+|.|||+.+++--..|.|.+++... +...... ++..-......++++|+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~-g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKT-GRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCC-CcEeeecccCceeecCCCCceeeEeccc
Confidence 34568999999999777764489898885321 2211110 01112345678898874
No 321
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=43.35 E-value=91 Score=28.32 Aligned_cols=58 Identities=22% Similarity=0.264 Sum_probs=37.0
Q ss_pred ceeeEEEcCCCCCEEE-EEeC-----------CCcEEEEeCCCCcceeEee-c--CceEEEEEcCCCCEEEEee
Q psy9316 167 SVDQLCWHATNPDLLS-TASG-----------DKTVRIWDARTQKSQIIAT-K--GENINITWAPNGNTIAVGN 225 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~-s~~~-----------dg~i~iwD~~t~~~~~~~~-~--~~~~~v~~sp~g~~la~gs 225 (264)
.-+.|.|.+.+ .+.+ +-.. .+.+..+|..+++...... + .+++.++|+||++.|.++-
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 44568888754 4544 4221 1256777777776543332 2 3578899999999987764
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=40.92 E-value=1.1e+02 Score=26.55 Aligned_cols=57 Identities=12% Similarity=0.253 Sum_probs=33.5
Q ss_pred eeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-e---------cCceEEEEEcCC---CCEE-EEee
Q psy9316 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-T---------KGENINITWAPN---GNTI-AVGN 225 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~---------~~~~~~v~~sp~---g~~l-a~gs 225 (264)
-..|+|.|++ .++++-...+.|++++..++...... . .+....|+|+|+ +.+| ++.+
T Consensus 29 P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 29 PHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred ceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 3578888854 57766444457998887655432221 1 123568999995 4444 4443
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=39.19 E-value=2e+02 Score=25.34 Aligned_cols=187 Identities=13% Similarity=0.127 Sum_probs=95.4
Q ss_pred CceEEecccc---ccccccccC----CCCEEEEEECCCCCeEEEEE-------CCCcEEEEEeccCCCCcccEEEecccc
Q psy9316 32 DDYVKHFNTH---NDIKEYQAH----GSKVHSVAWSCDGRRLASGS-------FDKSVAIFALDKKGDLNKEVVYRGHTG 97 (264)
Q Consensus 32 d~~~~~~~~~---~~~~~~~~h----~~~V~~l~~s~~g~~l~s~s-------~dg~i~v~~~~~~~~~~~~~~~~~h~~ 97 (264)
+..+.+|+.. ...+.|..| ..+|..-.-+++.++++..| -.|.+.+|+.+.. . ...+++|.+
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~--sQ~ieGhaa 199 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--V--SQPIEGHAA 199 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--C--EEEECCSEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--c--cchheeeee
Confidence 3445666542 344555544 34688888899999887543 2467888887532 2 234778877
Q ss_pred cEEeEEEecC--CCCeEEEEeCC---CcEEEEECCCCCcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceeeEE
Q psy9316 98 SVDQLCWHAT--NPDLLSTASGD---KTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 172 (264)
Q Consensus 98 ~v~~i~~~~~--~~~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~ 172 (264)
....+..... ...+++-+.+. +++.+-++....... ..-..+..++.-..+ ....-+| ++.
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~------~~f~kk~vdv~fppe-------~~~DFPv-amq 265 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN------QPFPKKAVDVFFPPE-------AQNDFPV-AMQ 265 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC------CCCCCEEEECCCCTT-------STTCCEE-EEE
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC------CCccceeeeeeCCcc-------cccCcee-EEE
Confidence 6655443211 11233333332 455555553321000 000000111100000 0001122 233
Q ss_pred EcCCCCCEEEEEeCCCcEEEEeCCCCcceeE--eecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 173 WHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 173 ~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~--~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
.++. ..++.-...-|.+.+||++++.+... .....+...+-.....-+......|.|.-..+.+
T Consensus 266 vs~k-ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 266 ISEK-HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EETT-TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred eccc-CCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 4443 34666678999999999999986332 2344455555555555555566777777666553
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=38.62 E-value=1.7e+02 Score=24.42 Aligned_cols=59 Identities=7% Similarity=0.062 Sum_probs=41.4
Q ss_pred ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCC-Ccce---eEeecCceEEEEEcC-CCCEEEEee
Q psy9316 167 SVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQ---IIATKGENINITWAP-NGNTIAVGN 225 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t-~~~~---~~~~~~~~~~v~~sp-~g~~la~gs 225 (264)
.-+.|+|+|++..+.++-+..+.|..||+.. +... .....+.+-.++..+ +|++++++.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 4577999998777777777889999999863 2221 112234556789999 599887664
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=35.26 E-value=2e+02 Score=24.03 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=42.3
Q ss_pred ceeeEEEcCCCCCEEEEEeCCCcEEEEeCCCCcceeEe-e-------cCceEEEEEcCC----CCEEEEee--CCCeEEE
Q psy9316 167 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA-T-------KGENINITWAPN----GNTIAVGN--KEDLVTF 232 (264)
Q Consensus 167 ~i~~i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~~~~~-~-------~~~~~~v~~sp~----g~~la~gs--~d~~i~~ 232 (264)
.-..|+|.|++ .++++--..|.|++++..++...... . .+....++++|+ +..+++-+ .++.|.-
T Consensus 33 ~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 33 SPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 34568888854 67776555899999987655432221 1 234678999995 44444332 3455555
Q ss_pred EEccc
Q psy9316 233 IDVVK 237 (264)
Q Consensus 233 ~d~~~ 237 (264)
|.+..
T Consensus 112 ~~~~~ 116 (347)
T 3das_A 112 MLYDE 116 (347)
T ss_dssp EEBCT
T ss_pred EEeCC
Confidence 66544
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=33.69 E-value=55 Score=29.82 Aligned_cols=50 Identities=14% Similarity=0.234 Sum_probs=0.0
Q ss_pred C-cEEEEeCCC------CcceeEeecCceEEEEEcCCCCEE-EEeeCCCeEEEEEccc
Q psy9316 188 K-TVRIWDART------QKSQIIATKGENINITWAPNGNTI-AVGNKEDLVTFIDVVK 237 (264)
Q Consensus 188 g-~i~iwD~~t------~~~~~~~~~~~~~~v~~sp~g~~l-a~gs~d~~i~~~d~~~ 237 (264)
| .+.+.|.+. .-......+..+..+..+|||+++ +.|..+.++.++|+++
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
No 327
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=31.72 E-value=85 Score=30.93 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=22.7
Q ss_pred EeEEEecCCCCeEEEEeCCCcEEEEECCCCC
Q psy9316 100 DQLCWHATNPDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 100 ~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
.+++..+ +..++++-+.|+++|+|++.+++
T Consensus 241 vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 241 ISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp SCCEEET-TTTEEEEEBTTCEEEEEETTTTE
T ss_pred EEeeccC-CccEEEEEeCCCEEEEEECCCCC
Confidence 3444443 44688899999999999998865
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=30.20 E-value=63 Score=31.21 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=26.8
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEEcccCCC
Q psy9316 209 NINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240 (264)
Q Consensus 209 ~~~v~~sp~g~~la~gs~d~~i~~~d~~~~~~ 240 (264)
+.+++..++..++.+-+.|+.+++|++.++.+
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 45677788899999999999999999887543
No 329
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=29.00 E-value=2.2e+02 Score=25.77 Aligned_cols=57 Identities=23% Similarity=0.282 Sum_probs=35.2
Q ss_pred eeeEEEcCCCCCEEEEEeCC------------CcEEEEeCCCCcceeEe-e--cCceEEEEEcCCCCEEEEee
Q psy9316 168 VDQLCWHATNPDLLSTASGD------------KTVRIWDARTQKSQIIA-T--KGENINITWAPNGNTIAVGN 225 (264)
Q Consensus 168 i~~i~~~~~~~~~i~s~~~d------------g~i~iwD~~t~~~~~~~-~--~~~~~~v~~sp~g~~la~gs 225 (264)
-..|+|+|.+ .+++.-..+ +.+.+.+..+++..... . ..++..++|+||++.|.+.-
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 3568888854 566543322 23555566666643322 2 23577899999999887763
No 330
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=28.64 E-value=67 Score=30.03 Aligned_cols=22 Identities=18% Similarity=0.377 Sum_probs=19.6
Q ss_pred CCeEEEEeCCCcEEEEECCCCC
Q psy9316 109 PDLLSTASGDKTVRIWDARTQK 130 (264)
Q Consensus 109 ~~~l~s~s~dg~i~vwd~~~~~ 130 (264)
..++++-+.|.++|+||+++++
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTE
T ss_pred CcEEEEEEcCCeEEEEEcCCCc
Confidence 4688999999999999999865
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.90 E-value=1.1e+02 Score=25.53 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=35.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCcceeEeecC---ceEEEEE--cC-CCCEEEEe-eCCCeEEEEEcccC
Q psy9316 179 DLLSTASGDKTVRIWDARTQKSQIIATKG---ENINITW--AP-NGNTIAVG-NKEDLVTFIDVVKS 238 (264)
Q Consensus 179 ~~i~s~~~dg~i~iwD~~t~~~~~~~~~~---~~~~v~~--sp-~g~~la~g-s~d~~i~~~d~~~~ 238 (264)
.+++.++.||.|.-+|.++++..-..... .+....- .+ ++..++.. +.||.++-+|...+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 36667899999999999998764433222 2222110 11 22333333 57888888886544
No 332
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=23.90 E-value=3e+02 Score=22.52 Aligned_cols=95 Identities=15% Similarity=0.090 Sum_probs=47.1
Q ss_pred EeecCCCeeEEEeecCceEEecccccc--c---cccccCCCCEEEEEECCC---CCeEEEEEC-C-----CcEEEEEecc
Q psy9316 17 KLLPSGSQFHLVCKIDDYVKHFNTHND--I---KEYQAHGSKVHSVAWSCD---GRRLASGSF-D-----KSVAIFALDK 82 (264)
Q Consensus 17 ~~~~~~~~~~~~~~~d~~~~~~~~~~~--~---~~~~~h~~~V~~l~~s~~---g~~l~s~s~-d-----g~i~v~~~~~ 82 (264)
.+.|.|. + .++...+.|+.++..+. + ..+..-......|+|+|+ +.+|+.+.. + ..|..|+.+.
T Consensus 37 a~~pdG~-l-~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 37 AFLPDGG-M-LIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLG 114 (352)
T ss_dssp EECTTSC-E-EEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECS
T ss_pred EEcCCCe-E-EEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCC
Confidence 4445553 3 33444566666653221 1 111122356899999998 555555433 2 5677777653
Q ss_pred CCCCcc-cEEE---e---cccccEEeEEEecCCCCeEEEE
Q psy9316 83 KGDLNK-EVVY---R---GHTGSVDQLCWHATNPDLLSTA 115 (264)
Q Consensus 83 ~~~~~~-~~~~---~---~h~~~v~~i~~~~~~~~~l~s~ 115 (264)
..... ..++ . ........+.|.|++ .+.++.
T Consensus 115 -~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~ 152 (352)
T 2ism_A 115 -ERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTT 152 (352)
T ss_dssp -SCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEEC
T ss_pred -CCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEE
Confidence 21111 1111 1 111123578898866 555543
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=23.33 E-value=6.3e+02 Score=26.08 Aligned_cols=187 Identities=13% Similarity=0.121 Sum_probs=0.0
Q ss_pred cCceEEeccc---cccccccccC----CCCEEEEEECCCCCeEEEEECC-------CcEEEEEeccCCCCcccEEEeccc
Q psy9316 31 IDDYVKHFNT---HNDIKEYQAH----GSKVHSVAWSCDGRRLASGSFD-------KSVAIFALDKKGDLNKEVVYRGHT 96 (264)
Q Consensus 31 ~d~~~~~~~~---~~~~~~~~~h----~~~V~~l~~s~~g~~l~s~s~d-------g~i~v~~~~~~~~~~~~~~~~~h~ 96 (264)
.+..+.+|+. ....+.|..| +.+|..-.-+++.++++..|-. |.+.+|+.+...... +++|.
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~----iegha 198 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP----IEGHA 198 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh----hhHhH
Q ss_pred ccEEeEEEe--cCCCCeEEEEeCC---CcEEEEECCCC-CcceEEEeecCCCcEEEEEeccCCCccceEEEeccccceee
Q psy9316 97 GSVDQLCWH--ATNPDLLSTASGD---KTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170 (264)
Q Consensus 97 ~~v~~i~~~--~~~~~~l~s~s~d---g~i~vwd~~~~-~~~~~~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~ 170 (264)
+....+... +....+++-+.+. +++.+-++... .....+ ...............-...
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f----------------~kk~~~~~~~~~~~~Dfpv 262 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF----------------PKKAVDVFFPPEAQNDFPV 262 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC----------------ccccccccCCcccccCcce
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEeCCCCcc--eeEeecCceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q psy9316 171 LCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 171 i~~~~~~~~~i~s~~~dg~i~iwD~~t~~~--~~~~~~~~~~~v~~sp~g~~la~gs~d~~i~~~d~~~ 237 (264)
..-......++.-.+.-|.+.+||++|+.+ ........+...+-.+...-++.....|.|.-..+.+
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
No 334
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.94 E-value=5.8e+02 Score=25.16 Aligned_cols=227 Identities=9% Similarity=0.060 Sum_probs=0.0
Q ss_pred CccceEee---cCCCCCceEeecCCCeeEEEeecCceEEeccccccccccc----cCCCCEEEEEEC---CCCCeEEEEE
Q psy9316 1 NVCPVIQF---HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQ----AHGSKVHSVAWS---CDGRRLASGS 70 (264)
Q Consensus 1 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~----~h~~~V~~l~~s---~~g~~l~s~s 70 (264)
|+.|++-| ....+-..++....+. +.+|.++..+.+-..+... ..-..++.+... ....+|+.+-
T Consensus 373 N~~PI~D~~v~d~~~~~~~~i~~~sG~-----g~~gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~ 447 (1158)
T 3ei3_A 373 NLGPIVDMCVVDLERQGQGQLVTCSGA-----FKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSF 447 (1158)
T ss_dssp CCCSEEEEEEECTTSSSCCEEEEEECC-----GGGCEEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEE
T ss_pred CcCCceeEEEEccCCCCCCeEEEEECc-----CCCCeEEEEecCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEEC
Q ss_pred CCCcEEEEEe---------ccCCCCcccEEEecccccEEeEEEecCCCCeEEEEeCCCcEEEEECCCCC-------cceE
Q psy9316 71 FDKSVAIFAL---------DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------SQIM 134 (264)
Q Consensus 71 ~dg~i~v~~~---------~~~~~~~~~~~~~~h~~~v~~i~~~~~~~~~l~s~s~dg~i~vwd~~~~~-------~~~~ 134 (264)
.+.+ .++.+ ...-......+.-+.-+.-.-+...+.+ -.++.......+.-|....+. +...
T Consensus 448 ~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~-Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~ 525 (1158)
T 3ei3_A 448 VGQT-RVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSAS-VRLVSQEPKALVSEWKEPQAKNISVASCNSSQ 525 (1158)
T ss_dssp TTEE-EEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSC-EEEEESSSCCEEEEECCTTCCCCCEEEECSSE
T ss_pred CCCe-EEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEecCE-EEEEECCCCeEEEEEECCCCCEEEEEEeCCCE
Q ss_pred EEeecCCCcEEEEEeccCCCccceEEEeccccceeeEEEcCCC-----CCEEEEEeC-CCcEEEEeCCCCcc-eeEeecC
Q psy9316 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-----PDLLSTASG-DKTVRIWDARTQKS-QIIATKG 207 (264)
Q Consensus 135 ~~~~~~d~~i~i~~~~~~~~~~~~~~~~~h~~~i~~i~~~~~~-----~~~i~s~~~-dg~i~iwD~~t~~~-~~~~~~~ 207 (264)
++.++ ++.+.++.++. .......-..-...|.++.+.|.. +.+++.|+. |++++|+++.+-+. ..+....
T Consensus 526 vvva~-g~~l~~fel~~--~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 526 VVVAV-GRALYYLQIHP--QELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp EEEEE-TTEEEEEEEET--TEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred EEEEE-CCEEEEEEeeC--CceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Q ss_pred --ceEEEEEcCCCC--EEEEeeCCCeEEEEEccc
Q psy9316 208 --ENINITWAPNGN--TIAVGNKEDLVTFIDVVK 237 (264)
Q Consensus 208 --~~~~v~~sp~g~--~la~gs~d~~i~~~d~~~ 237 (264)
.+.++.+...+. +|.+|-.||.+..+.+..
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
No 335
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=21.57 E-value=3.4e+02 Score=22.32 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=14.6
Q ss_pred CCCEEEEEECC-CCCeEEEEECCC
Q psy9316 51 GSKVHSVAWSC-DGRRLASGSFDK 73 (264)
Q Consensus 51 ~~~V~~l~~s~-~g~~l~s~s~dg 73 (264)
...|.+|.++| +...|..++..|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCceEEEEECCCCCCeEEEEecCC
Confidence 35699999998 444555555444
No 336
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.42 E-value=65 Score=31.74 Aligned_cols=30 Identities=10% Similarity=0.183 Sum_probs=25.0
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEEcccCC
Q psy9316 210 INITWAPNGNTIAVGNKEDLVTFIDVVKSL 239 (264)
Q Consensus 210 ~~v~~sp~g~~la~gs~d~~i~~~d~~~~~ 239 (264)
.+++..++..++.+-+.|+.+++|++.++.
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 445667888999999999999999987654
Done!