Your job contains 1 sequence.
>psy9316
NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWS
CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT
VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL
LSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP
PRERTLTSRGHLMETRSLWGTKRT
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9316
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 362 3.2e-33 1
UNIPROTKB|E1BDF6 - symbol:E1BDF6 "Uncharacterized protein... 334 2.1e-32 2
FB|FBgn0037569 - symbol:tex "tex" species:7227 "Drosophil... 354 2.3e-32 1
UNIPROTKB|F1NUQ0 - symbol:THOC3 "Uncharacterized protein"... 349 7.7e-32 1
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 349 7.7e-32 1
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 349 7.7e-32 1
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 349 7.7e-32 1
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 349 7.7e-32 1
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 349 7.7e-32 1
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 349 7.7e-32 1
TAIR|locus:2161840 - symbol:TEX1 "AT5G56130" species:3702... 275 5.3e-24 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 137 6.2e-14 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 189 2.2e-13 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 188 3.8e-13 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 143 5.1e-13 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 185 5.2e-13 1
DICTYBASE|DDB_G0276031 - symbol:DDB_G0276031 "WD40 repeat... 187 7.6e-13 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 123 8.2e-13 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 184 1.8e-12 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 135 2.0e-12 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 183 2.1e-12 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 183 2.1e-12 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 181 2.3e-12 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 156 2.7e-12 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 120 3.1e-12 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 181 3.2e-12 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 180 4.7e-12 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 180 6.1e-12 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 130 6.6e-12 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 130 1.2e-11 2
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 138 2.7e-11 2
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 130 2.7e-11 2
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 130 2.7e-11 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 175 2.9e-11 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 173 3.6e-11 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 173 3.7e-11 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 173 3.7e-11 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 173 3.7e-11 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 173 3.7e-11 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 173 5.2e-11 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 126 5.6e-11 2
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 126 5.6e-11 2
UNIPROTKB|E1BRJ9 - symbol:PAM16 "Coronin" species:9031 "G... 124 5.7e-11 2
UNIPROTKB|F1NP32 - symbol:PAM16 "Coronin" species:9031 "G... 124 5.7e-11 2
UNIPROTKB|E1BR57 - symbol:PAM16 "Coronin" species:9031 "G... 124 5.7e-11 2
WB|WBGene00009341 - symbol:thoc-3 species:6239 "Caenorhab... 149 6.2e-11 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 174 8.0e-11 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 177 1.0e-10 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 169 1.4e-10 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 168 1.6e-10 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 123 1.9e-10 2
ASPGD|ASPL0000060163 - symbol:AN1385 species:162425 "Emer... 169 2.0e-10 1
UNIPROTKB|F1RK53 - symbol:LOC100513346 "Coronin" species:... 112 2.3e-10 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 169 2.4e-10 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 169 2.4e-10 1
UNIPROTKB|Q5AZD9 - symbol:AN6341.2 "Coronin" species:2273... 170 2.6e-10 1
ASPGD|ASPL0000000923 - symbol:AN6341 species:162425 "Emer... 170 2.7e-10 1
UNIPROTKB|E2R4Z2 - symbol:E2R4Z2 "Coronin" species:9615 "... 121 3.0e-10 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 167 4.1e-10 1
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 163 4.5e-10 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 165 5.5e-10 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 167 6.0e-10 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 167 6.3e-10 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 123 6.3e-10 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 162 7.5e-10 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 166 7.8e-10 1
UNIPROTKB|P57737 - symbol:CORO7 "Coronin-7" species:9606 ... 115 8.8e-10 2
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 119 1.1e-09 2
MGI|MGI:1314881 - symbol:Chaf1b "chromatin assembly facto... 156 1.1e-09 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 115 1.2e-09 2
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 121 1.3e-09 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 163 1.3e-09 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 150 1.4e-09 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 162 1.4e-09 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 115 1.5e-09 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 115 1.5e-09 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 115 1.5e-09 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 115 1.5e-09 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 115 1.5e-09 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 115 1.5e-09 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 161 2.0e-09 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 120 2.1e-09 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 161 2.2e-09 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 161 2.3e-09 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 160 2.5e-09 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 158 2.6e-09 1
MGI|MGI:1926135 - symbol:Coro7 "coronin 7" species:10090 ... 114 2.9e-09 2
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 157 3.0e-09 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 160 3.0e-09 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 161 3.2e-09 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 133 3.2e-09 2
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 104 3.3e-09 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 158 3.4e-09 1
POMBASE|SPCC18B5.10c - symbol:SPCC18B5.10c "TREX complex ... 155 4.3e-09 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 118 4.6e-09 2
WARNING: Descriptions of 651 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 72/109 (66%), Positives = 84/109 (77%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH TNPDL TASGDKT+RIWD
Sbjct: 41 LASGSFDKTASVFVLEKDR-LVKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWD 99
Query: 195 ARTQKSQI-IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPR 242
RT K ++TKGENINI W+P+G TIAVGNK+D+VTFID K+ PR
Sbjct: 100 VRTTKCMATVSTKGENINICWSPDGQTIAVGNKDDVVTFIDA-KTHRPR 147
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 85/214 (39%), Positives = 118/214 (55%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
F +N +E+ AH +KVHSVAWSCDG+RLASGSFDK+ ++F L+K L KE YRGH
Sbjct: 13 FRNNNKSREFPAHSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDR-LVKENNYRGHGD 71
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVA------IFALDK 151
SVDQLCWH TNPDL TASGDKT+RIWD RT K +++ + ++ A+
Sbjct: 72 SVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICWSPDGQTIAVGN 131
Query: 152 KGDLNKEVVYRGHTG--------SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QI 202
K D+ + + H V+++ W+ N D+ +G+ + I K Q
Sbjct: 132 KDDVVTFIDAKTHRPRAEEQFKFEVNEISWNNDN-DMFFLTNGNGCINILSYPELKLIQS 190
Query: 203 IATKGEN-INITWAPNGNTIAVGNKEDLVTFIDV 235
I N I I + P G A G+ + LV+ +V
Sbjct: 191 INAHPSNCICIKFDPTGKYFATGSADALVSLWNV 224
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 334 (122.6 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 62/93 (66%), Positives = 72/93 (77%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
F H+ +E+ AH +KVHSVAWSCDGRRLASGSFDK+ ++F L+K L KE YRGH
Sbjct: 42 FRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR-LVKENNYRGHGD 100
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
SVDQLCWH +NPDL TASGDKT+RIWD RT K
Sbjct: 101 SVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTK 133
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 57/101 (56%), Positives = 69/101 (68%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKG + W P G TI +K+DL+ F+D
Sbjct: 129 VRTTKCIATVNTKGNCSELCWEPEGQTIDCNSKDDLLLFLD 169
Score = 36 (17.7 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 182 STASGDKTVRIWD 194
+T S D V +WD
Sbjct: 240 ATGSADALVSLWD 252
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+V +++L++ L K YRGHT SVDQLCWH TNPD +TASGDKTVRIWD
Sbjct: 43 LASGSFDKTVVVYSLERDRFL-KGNTYRGHTASVDQLCWHRTNPDQFATASGDKTVRIWD 101
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
R K + TKGENINI W+P+G TIAVGNKEDL+TFID
Sbjct: 102 IRVGKCVSVTNTKGENINIAWSPDGKTIAVGNKEDLITFID 142
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 42 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 100
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 101 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 141
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 68/101 (67%), Positives = 79/101 (78%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK+ ++F L+K L KE YRGH SVDQLCWH +NPDL TASGDKT+RIWD
Sbjct: 70 LASGSFDKTASVFLLEKDR-LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD 128
Query: 195 ARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
RT K + TKGENINI W+P+G TIAVGNK+D+VTFID
Sbjct: 129 VRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFID 169
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 55/112 (49%), Positives = 78/112 (69%)
Query: 135 LASGSFDKSVAIFALDKKGDLN-KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
LASGS D++ I+ ++ G K++ +GHT SVDQLCW + DL++TASGDK+VR+W
Sbjct: 35 LASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Query: 194 DARTQK-SQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
DAR+ K +Q + GENINIT+ P+G +AVGN++D +T +DV K P R
Sbjct: 95 DARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILDVRKFKPLHRR 146
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 71/208 (34%), Positives = 112/208 (53%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLN-KEVVYRGHTGSVDQLC 103
+EYQ H KVHSVAW+ +G +LASGS D++ I+ ++ G K++ +GHT SVDQLC
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQK--SQIMLASGSFDKS-------VAIFALDKKG- 153
W + DL++TASGDK+VR+WDAR+ K Q+ L+ + + + VA+ D +
Sbjct: 74 WDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELT 133
Query: 154 --DLNK-EVVYRGHTG-SVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--SQIIATKG 207
D+ K + ++R V+++ W+ D +G TV + + K + A
Sbjct: 134 ILDVRKFKPLHRRKFNYEVNEIAWNMPG-DFFFLTTGLGTVEVLSYPSLKPLDTLTAHTA 192
Query: 208 ENINITWAPNGNTIAVGNKEDLVTFIDV 235
I P G AVG+ + LV+ D+
Sbjct: 193 GCYCIAIDPKGRYFAVGSADSLVSLWDI 220
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/111 (34%), Positives = 61/111 (54%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I + H V+ ++S DGR +A+ SFD SV ++ K G + RGH +V Q
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD-GKTGKFLATL--RGHVAAVYQCA 438
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
W +T+ LL ++S D T+++WD R++K + L G D+ +FA+D D
Sbjct: 439 W-STDSRLLVSSSQDTTLKVWDVRSKKMKFDLP-GHEDQ---VFAVDWSPD 484
Score = 126 (49.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+A+ SFD SV ++ K G + RGH +V Q W +T+ LL ++S D T+++WD
Sbjct: 404 IATASFDSSVRLWD-GKTGKFLATL--RGHVAAVYQCAW-STDSRLLVSSSQDTTLKVWD 459
Query: 195 ARTQKSQIIATKGEN--INITWAPNGNTIAVGNKEDLV 230
R++K + E+ + W+P+G +A G + V
Sbjct: 460 VRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAV 497
Score = 123 (48.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 20 PSGSQFHLVCKIDDYVKHF---NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA 76
PS S LV D+ +T I + H + V VAW+ D +A+GS D ++
Sbjct: 144 PSTSS-RLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIR 202
Query: 77 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATN--PD----LLSTASGDKTVRIWDARTQK 130
+ KKG + + R HT + LCW + PD LL++ S D TVRIW+ + +
Sbjct: 203 FWD-PKKGSPIGDALRR-HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKL-R 259
Query: 131 SQIMLASG 138
+ + SG
Sbjct: 260 TLLFTLSG 267
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN--IN-ITWAPNGN 219
GH G++ + + L T SGD T R+WD TQ + I KG ++ + WAP+ +
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQ-TPIATMKGHTNWVSCVAWAPDAS 190
Query: 220 TIAVGNKEDLVTFIDVVKSLP 240
IA G+ ++ + F D K P
Sbjct: 191 IIATGSMDNTIRFWDPKKGSP 211
Score = 94 (38.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN--PD----LLSTASGD 187
++A+GS D ++ + KKG + + R HT + LCW + PD LL++ S D
Sbjct: 191 IIATGSMDNTIRFWD-PKKGSPIGDALRR-HTKPIMALCWQPLHLAPDSGPYLLASGSKD 248
Query: 188 KTVRIWDARTQKSQIIATKGENINIT 213
TVRIW+ + ++ + G IT
Sbjct: 249 NTVRIWNVKL-RTLLFTLSGHTAPIT 273
Score = 88 (36.0 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LASGS D +V I+ + + L GHT + + W N + ++S DKT+RIW
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLL---FTLSGHTAPITCVRWGGQN--WIYSSSYDKTIRIW 295
Query: 194 DARTQK 199
DA+ K
Sbjct: 296 DAKDGK 301
Score = 70 (29.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129
GH G++ + + L T SGD T R+WD TQ
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQ 167
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 189 (71.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 64/221 (28%), Positives = 105/221 (47%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 45 VWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGE---STVFRA 101
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVA 145
HT +V + + + L+ TAS DKTV++W QK SQ + A S D +
Sbjct: 102 HTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLI 160
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ AS D TV++WD RT
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTH 219
Query: 199 KS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLME 260
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 55/209 (26%), Positives = 103/209 (49%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H + SV +S + ++LASGS D + ++ + + ++ + GH +V + +
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQ---SRAYRFAGHKDAVTCVNF 69
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDL----NKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + + +K V
Sbjct: 70 SPSG-HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVH-FCSDGQSLVTASDDKTV 127
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKS-QIIATKG 207
V+ H S+ Q + W +PD L+ +AS DKTV++WD +++ G
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 208 ENIN-ITWAPNGNTIAVGNKEDLVTFIDV 235
+ + + P+G IA + ++ V DV
Sbjct: 188 GFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 188 (71.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 67/241 (27%), Positives = 116/241 (48%)
Query: 20 PSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGSFDKSVAI 77
PSG Q +D V +N + Y+ G K V V +S LAS S DK+V +
Sbjct: 28 PSGKQI-ASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRL 86
Query: 78 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK------- 130
+ KG+ V++R HTGSV +C+ A LL TAS D+++++W QK
Sbjct: 87 WVPSVKGE---SVLFRAHTGSVRSVCFSADGQSLL-TASDDQSIKLWSVHRQKIICTLRE 142
Query: 131 --SQIMLASGSFDKSVAIFALD----KKGDLN-KEVVYR-----GHTGSVDQLCWHATNP 178
+ + A S D + + D K D + +++++ G++ VD +H ++
Sbjct: 143 HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVD---FHPSST 199
Query: 179 DLLSTASGDKTVRIWDARTQKS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVV 236
++TAS D TVR+WD RT Q +N +++ P+GN + + + + +D++
Sbjct: 200 -CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 237 K 237
+
Sbjct: 259 E 259
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 49/210 (23%), Positives = 100/210 (47%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H + S+ +S G+++ASGS D SV ++ + + ++ + GH +V + +
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQ---SRAYRFTGHKDAVTCVQF 68
Query: 105 HATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGH 164
+ + LL+++S DKTVR+W + ++ + + F+ D + L
Sbjct: 69 -SPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIK 127
Query: 165 TGSVDQ---LC-------WHAT---NPD--LLSTASGDKTVRIWDARTQKSQIIAT---- 205
SV + +C W +PD L+ + S D+TV++WDA ++ Q+I T
Sbjct: 128 LWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR--QLIHTFCEP 185
Query: 206 KGENINITWAPNGNTIAVGNKEDLVTFIDV 235
G + + + P+ IA + ++ V D+
Sbjct: 186 GGYSSYVDFHPSSTCIATASSDNTVRVWDI 215
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 23 SQFHLVCKIDDYVKHF----NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF 78
S+ +V DDY + I H V+ VA+S DGR + S SFD S+ ++
Sbjct: 370 SEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW 429
Query: 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG 138
+ G +RGH SV Q+ W +++ LL + S D T+++WD RT+K + L G
Sbjct: 430 D-GRDGKFIS--TFRGHVASVYQVAW-SSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP-G 484
Query: 139 SFDKSVAI-FALDKK 152
D+ + +++D K
Sbjct: 485 HKDEVYTVDWSVDGK 499
Score = 129 (50.5 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+ S SFD S+ ++ + G +RGH SV Q+ W +++ LL + S D T+++WD
Sbjct: 417 IVSASFDNSIKLWD-GRDGKFIS--TFRGHVASVYQVAW-SSDCRLLVSCSKDTTLKVWD 472
Query: 195 ARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLV 230
RT+K + K E + W+ +G + G K+ +V
Sbjct: 473 VRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMV 510
Score = 111 (44.1 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 29/104 (27%), Positives = 53/104 (50%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 98
+T + + H + V V+WS DG +A+GS D ++ ++ K G + + RGH+
Sbjct: 174 DTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWD-PKSGQCLGDAL-RGHSKW 231
Query: 99 VDQLCW---HATNPDL---LSTASGDKTVRIWDARTQKSQIMLA 136
+ L W H P L+++S D T++IWD ++ Q ++
Sbjct: 232 ITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMS 275
Score = 59 (25.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 94 GHTGSVDQLCWHATNPDLLS---TASGDKTVRIWDARTQ 129
GH ++ LC A P S T +GD T RIWD TQ
Sbjct: 141 GHGSTI--LC-SAFAPHTSSRMVTGAGDNTARIWDCDTQ 176
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 185 (70.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 61/219 (27%), Positives = 104/219 (47%)
Query: 37 HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 96
H + + H V V +S G LASGS DK+V I+ + KG+ V+R HT
Sbjct: 47 HMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHT 103
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVAIF 147
+V + + ++ LL TAS DKTV++W Q+ +Q + A S D + +
Sbjct: 104 ATVRSVHF-CSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVS 162
Query: 148 ALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200
A D K ++E V Y H G V + +H + ++ A D TV++WD RT +
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDTRTHRL 221
Query: 201 -QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P+GN + + + + +D+++
Sbjct: 222 VQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 55/208 (26%), Positives = 99/208 (47%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V V +S + + LASGS D ++ I+ + + ++ + GH +V + +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQ---SRAYRFTGHKDAVTCVNF 69
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKK----GDLNKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + +K V
Sbjct: 70 SPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVH-FCSDGQLLVTASDDKTV 127
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKS-QIIATKG 207
V+ H S+ Q + W +PD L+ +AS DKTV++WD +++ G
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 208 ENIN-ITWAPNGNTIAVGNKEDLVTFID 234
+ + + P+G IA ++ V D
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 187 (70.9 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 41/149 (27%), Positives = 78/149 (52%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKG 153
G+ + W+A + S+ S D VR+W+ + S + + S + K
Sbjct: 163 GNKKKSTSVAWNANGTKIASSGS-DGIVRVWNFDPLGN-----SNNNNNSNNTSSNSKNN 216
Query: 154 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENINI 212
++ + + +GH GS++++ W N DLL++A DK ++IWD + K ++T ENI++
Sbjct: 217 NIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENIDV 276
Query: 213 TWAPNGNTIAVGNKEDLVTFIDV--VKSL 239
W+P+G I ++D + ID+ +K+L
Sbjct: 277 RWSPDGQFIVACTRDDHLALIDLPTIKTL 305
Score = 120 (47.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 29/121 (23%), Positives = 59/121 (48%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVA-------WSCDGRRLASG 69
K L S++ C D++ + + + A+G+K+ S W+ D ++
Sbjct: 144 KNLDLASRYFSECSTKDFIGNKKKSTSVA-WNANGTKIASSGSDGIVRVWNFDPLGNSNN 202
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129
+ + S + K ++ + + +GH GS++++ W N DLL++A DK ++IWD +
Sbjct: 203 N-NNSNNTSSNSKNNNIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIG 261
Query: 130 K 130
K
Sbjct: 262 K 262
Score = 45 (20.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/83 (19%), Positives = 36/83 (43%)
Query: 160 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD----ARTQKSQIIATKGENINI--- 212
+Y+ + ++Q+ W N DL+ A+ + + + T + G +I
Sbjct: 307 IYKFNGEELNQVGWD-NNGDLILMANSMGNIEAYKFLPKSTTHVKHLKTLYGHTASIYCM 365
Query: 213 TWAPNGNTIAVGNKEDLVTFIDV 235
+ P G +A G+ + +V+ D+
Sbjct: 366 EFDPTGKYLAAGSADSIVSLWDI 388
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 123 (48.4 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS FD V ++ G K + RGH G+V Q C+ A + LL ++S D T+++W
Sbjct: 420 IASAGFDNHVKLW----NGRDGKFITTLRGHVGAVYQCCFSADSR-LLVSSSKDTTLKVW 474
Query: 194 DARTQK--SQIIATKGENINITWAPNGNTIAVGNKEDLV 230
+ RT K + K E + W+P+G + G K+ +
Sbjct: 475 NVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAI 513
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 66/236 (27%), Positives = 105/236 (44%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSC-----DGR-RL 66
SP ++ +GS + V +I D K +K H + S+AW G RL
Sbjct: 200 SPNGAMIATGSMDNTV-RIWDAKKGQALGAPLK---GHVKWITSLAWEPYHLQQSGHPRL 255
Query: 67 ASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
AS S D +V I+ + K+ D +V GH GSV + W T + T+S D+T+++W+
Sbjct: 256 ASASKDSTVRIWDVISKRAD----IVLSGHKGSVTCVRWGGTGK--IYTSSHDRTIKVWN 309
Query: 126 ARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSV-----DQLCWH------ 174
++T + I S + V AL D Y HTG V D++
Sbjct: 310 SQTG-TLIQTLSAHAHR-VNHLALST--DFILRTAYHDHTGKVPESDADKVAMAKKRFEK 365
Query: 175 -AT-NPDL---LSTASGDKTVRIWDARTQKSQIIATKG--ENIN-ITWAPNGNTIA 222
AT N + L +AS D T+ +WD + + G + +N +T++P+ IA
Sbjct: 366 AATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIA 421
Score = 116 (45.9 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 98
+T + + H S V +V++S +G +A+GS D +V I+ K L + +GH
Sbjct: 179 DTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPL--KGHVKW 236
Query: 99 VDQLCW---HA--TNPDLLSTASGDKTVRIWDARTQKSQIMLA 136
+ L W H + L++AS D TVRIWD ++++ I+L+
Sbjct: 237 ITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLS 279
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 27 LVCKIDDYVKHF----NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDK 82
LV DD+ + ++ + H +V+ V +S D +AS FD V ++
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLW---- 432
Query: 83 KGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFD 141
G K + RGH G+V Q C+ A + LL ++S D T+++W+ RT K L G D
Sbjct: 433 NGRDGKFITTLRGHVGAVYQCCFSADSR-LLVSSSKDTTLKVWNVRTGKLSEDLP-GHKD 490
Query: 142 KSVAIFALDKKGDLNK 157
+ +FA+D D K
Sbjct: 491 E---VFAVDWSPDGQK 503
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
GH ++ + + + + SGD T RIWD T
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDT 180
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 184 (69.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 60/225 (26%), Positives = 111/225 (49%)
Query: 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
+++ + H + +V +S DGR LASGS D ++ ++ G L + + GH+ SV +
Sbjct: 33 ELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD-PASGGLKQTL--EGHSSSVQSV 89
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL-NKEVVY 161
+ + N LL++ S D T+++W++ + + + G D+ ++ A G L N +
Sbjct: 90 AF-SPNGQLLASGSSDTTIKLWNSASDSLKHTM-EGHSDRVESV-AFSPNGQLWNPAIGS 146
Query: 162 RGHT--GSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIATKGENIN----IT 213
HT G D + A +PD LL++ S +KT+++WD+ T + T G + N +
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT--CGLKHTLGGHSNWVLPLV 204
Query: 214 WAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
++P+G +A G+ + + D P T GH + SL
Sbjct: 205 FSPDGRLLASGSNDATIKLWDP----PSGSLKHTLEGHSNKIESL 245
Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 63/235 (26%), Positives = 113/235 (48%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFN-THNDIKE-YQAHGSKVHSVAWSCDGRRLASGS 70
SP+ +LL SGS D +K ++ +K+ + H S V SVA+S +G+ LASGS
Sbjct: 50 SPDGRLLASGSN-------DTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGS 102
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC-------WHATNPDLLSTASGDKTVRI 123
D ++ ++ + D K + GH+ V+ + W+ L T G +
Sbjct: 103 SDTTIKLW--NSASDSLKHTM-EGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVL 159
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LL 181
A + Q+ LASGS +K++ ++ G K + GH+ V L + +PD LL
Sbjct: 160 SVAFSPDGQL-LASGSAEKTIKLWDSATCG--LKHTL-GGHSNWVLPLVF---SPDGRLL 212
Query: 182 STASGDKTVRIWD--ARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
++ S D T+++WD + + K + + ++ ++PNG +A G+ + + D
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 123 (48.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 47/169 (27%), Positives = 84/169 (49%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S DG+ LASGS +K++ ++ G K + GH+ V L + +
Sbjct: 152 EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCG--LKHTL-GGHSNWVLPLVF-SP 207
Query: 108 NPDLLSTASGDKTVRIWDART---------QKSQI----------MLASGSFDKSVAIFA 148
+ LL++ S D T+++WD + ++I +LASGS D ++ ++
Sbjct: 208 DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Query: 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 197
G + +GH+ V + + + + LL + SGD T+++WD T
Sbjct: 268 T-ATGSFRHTL--KGHSDMVLSVVF-SPDSQLLESGSGDNTIKLWDPAT 312
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP + L +G+ F I + K + + H +V SVAW G LA+ S D
Sbjct: 78 SPCGRFL-AGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRD 136
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW-DARTQKS 131
KS+ I+ ++ D + GH + + WH N +LL+++S D T++ W D
Sbjct: 137 KSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHP-NEELLASSSYDDTIKFWKDIDGDWE 195
Query: 132 QIMLASGSFDKSVAIFALDKKGD 154
I +G + S+ A +K GD
Sbjct: 196 CINTLTGH-ESSIWDLAFNKDGD 217
Score = 129 (50.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 20 PSGSQFHLVCKIDDYVKHFNTHND-----IKEYQAHGSKVHSVAWSCDGRRLASGSFDKS 74
P+G + C D Y++ ++ + ++ + H V VAWS GR LA SFD S
Sbjct: 34 PNG-EILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDAS 92
Query: 75 VAIFALDKKG-DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+I+ K + GHT V + W +T LL+T S DK++ IW
Sbjct: 93 TSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGT-LLATCSRDKSIWIW 142
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 38/131 (29%), Positives = 58/131 (44%)
Query: 111 LLSTASG-DKTVR--IWDARTQKSQIMLASGSFDKSVAIFALDKKG-DLNKEVVYRGHTG 166
L+ + G +KTVR W + LA SFD S +I+ K + GHT
Sbjct: 61 LVQSLEGHEKTVRRVAWSPCGR----FLAGASFDASTSIWEKSKDELEFTHVSSLEGHTY 116
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----QIIATKGENIN-ITWAPNGNTI 221
V + W +T LL+T S DK++ IW I + G++I + W PN +
Sbjct: 117 EVKSVAWDSTGT-LLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELL 175
Query: 222 AVGNKEDLVTF 232
A + +D + F
Sbjct: 176 ASSSYDDTIKF 186
Score = 99 (39.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 33/108 (30%), Positives = 48/108 (44%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D ++ F D GD GH S+ L ++ L+S DK V W
Sbjct: 174 LLASSSYDDTIK-FWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGE-DKLVLFW 231
Query: 194 --DARTQK-SQIIATKGEN----INITWAPNGNTIAVGNKEDLVTFID 234
D +K I K EN +I W+ NTI G+ +D + F +
Sbjct: 232 KFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYE 279
Score = 92 (37.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183
WD+ + +LA+ S DKS+ I+ ++ D + GH + + WH N +LL++
Sbjct: 123 WDS----TGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHP-NEELLAS 177
Query: 184 ASGDKTVRIW 193
+S D T++ W
Sbjct: 178 SSYDDTIKFW 187
Score = 89 (36.4 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 43 DIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
D + +A KV ++AW +G LA+ + DK + I++ D G GH +V ++
Sbjct: 16 DSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRV 75
Query: 103 CWHATNPDLLSTASGDKTVRIWD 125
W L+ AS D + IW+
Sbjct: 76 AWSPCGR-FLAGASFDASTSIWE 97
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 86 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
+ KE Y V L WH N ++L+T + DK ++IW T
Sbjct: 18 MQKEAPY----DKVWNLAWHP-NGEILATCANDKYIQIWSKDT 55
Score = 60 (26.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/130 (21%), Positives = 54/130 (41%)
Query: 110 DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD--LNKEVVYRGHTGS 167
+ ++T +G ++ IWD K L S DK V + DK+ + +N ++
Sbjct: 195 ECINTLTGHES-SIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRP 253
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQ----KSQIIATK----GENINIT-WAPNG 218
+ + W + ++ T S D ++ ++ + K +II K ++N T W P
Sbjct: 254 IYSIDWSSLTNTIV-TGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKF 312
Query: 219 NTIAVGNKED 228
I +D
Sbjct: 313 KNILASCGDD 322
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/64 (18%), Positives = 31/64 (48%)
Query: 135 LASGSFDKSVAIFALDKKGDLNK-EVVYR---GHTGSVDQLCWHATNPDLLSTASGDKTV 190
+ +GS D S+ + + +K +++ + H V+ W+ ++L++ D +
Sbjct: 266 IVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFI 325
Query: 191 RIWD 194
+IW+
Sbjct: 326 KIWE 329
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 183 (69.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 60/219 (27%), Positives = 104/219 (47%)
Query: 37 HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 96
H + + H V V +S G LASGS DK+V I+ + KG+ V+R HT
Sbjct: 47 HMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRAHT 103
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVAIF 147
+V + + + L+ TAS DKTV++W Q+ +Q + A S D + +
Sbjct: 104 ATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVS 162
Query: 148 ALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200
A D K ++E + Y H G V + +H + ++ A D TV++WDART +
Sbjct: 163 ASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDARTHRL 221
Query: 201 -QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P+GN + + + + +D+++
Sbjct: 222 LQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 57/209 (27%), Positives = 101/209 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V V +S + + LASGS D ++ I+ + + ++ + GH +V + +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQ---SRAYRFTGHKDAVTCVNF 69
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDL----NKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + + +K V
Sbjct: 70 SPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVH-FCSDGQSLVTASDDKTV 127
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKSQI--IATK 206
V+ H S+ Q + W +PD L+ +AS DKTV++WD +T + I
Sbjct: 128 KVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECIHSYCEH 186
Query: 207 GENIN-ITWAPNGNTIAVGNKEDLVTFID 234
G + + + P+G IA ++ V D
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 183 (69.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 62/221 (28%), Positives = 102/221 (46%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 45 VWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRA 101
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVA 145
HT +V + + + + TAS DKTV++W QK SQ + A S D +
Sbjct: 102 HTATVRSVHFCSDGQSFV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ A D TV++WD RT
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTH 219
Query: 199 KS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 260
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V SV +S + ++LASGS D + ++ + + + + GH +V + +
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQ---TRAYRFAGHKDAVTCVNF 69
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDL----NKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + + +K V
Sbjct: 70 SPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVH-FCSDGQSFVTASDDKTV 127
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKS-QIIATKG 207
V+ H S+ Q + W +PD L+ +AS DKTV++WD +++ G
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 208 ENIN-ITWAPNGNTIAVGNKEDLVTFIDV 235
+ + + P+G IA ++ V DV
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 181 (68.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 63/214 (29%), Positives = 107/214 (50%)
Query: 40 THNDIKEY--QAHGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHT 96
T N I +Y + H + SV +S DG+ LAS S DK++ I+ A D K + E GH
Sbjct: 33 TPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE----GHK 88
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------------SQIMLAS 137
+ + W + + L+ +AS DKT++IWD + K ++ S
Sbjct: 89 EGISDIAW-SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVS 147
Query: 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 197
GSFD++V I+ ++ G+ K + H+ V + ++ L+ + S D TVRIWD T
Sbjct: 148 GSFDENVRIWDVNT-GECTKMI--SAHSDPVTGVHFNRDGT-LVVSGSYDGTVRIWDTTT 203
Query: 198 -QKSQIIATK-GENIN-ITWAPNGNTIAVGNKED 228
Q I+T+ G+ ++ + ++PNG + G ++
Sbjct: 204 GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDN 237
Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRL 66
H K P G ++ D +K + ++ E G K + +AWS D + +
Sbjct: 45 HLKSISSVKFSPDG-KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 67 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126
S S DK++ I+ ++ G + K + +GH V + ++ + +L+ + S D+ VRIWD
Sbjct: 104 CSASDDKTIKIWDVES-GKMVKTL--KGHKEYVFGVSFNPQS-NLIVSGSFDENVRIWDV 159
Query: 127 RTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 186
T + M+++ S D + ++ G L VV + G+V W T LL+T S
Sbjct: 160 NTGECTKMISAHS-DPVTGVH-FNRDGTL---VVSGSYDGTVR--IWDTTTGQLLNTIST 212
Query: 187 D--KTVRIWDARTQKSQIIATKGENINITWAPNGN 219
+ K V ++A +N W+ N N
Sbjct: 213 EDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN 247
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 156 (60.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 12 KSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSF 71
KS ++L SGS V + V T I H ++ V++S DGR AS SF
Sbjct: 359 KSKGMEILISGSDDFTVIMWNPSV----TKTSISRLTGHQQLINLVSFSPDGRYFASASF 414
Query: 72 DKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DKS+ ++ D G K + +RGH G+V Q+CW + + L+S S D T++IWD +T+K
Sbjct: 415 DKSIKLW--D--GQSGKFLGNFRGHVGAVYQVCWSSDSRYLVS-GSKDSTLKIWDIKTKK 469
Query: 131 SQ 132
+
Sbjct: 470 ME 471
Score = 154 (59.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 35/98 (35%), Positives = 59/98 (60%)
Query: 136 ASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
AS SFDKS+ ++ G K + +RGH G+V Q+CW + + L+S S D T++IWD
Sbjct: 410 ASASFDKSIKLW----DGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVS-GSKDSTLKIWD 464
Query: 195 ARTQK--SQIIATKGENINITWAPNGNTIAVGNKEDLV 230
+T+K ++ E + W+P+G+ +A G+K+ L+
Sbjct: 465 IKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLL 502
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 55/223 (24%), Positives = 98/223 (43%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA- 106
+ H + V VAWS D +++A+ + + I+ L + +GHT + L W
Sbjct: 179 KGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTL--KGHTKFITGLSWEPF 236
Query: 107 -TNPDL--LSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFA---LDKKGDLNKEV- 159
NP L+++S D T+RIWD + K+ + L+ + + + L G ++ V
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVR 296
Query: 160 VYRGHTGSVDQLC-----WHAT---NPD-LLSTASGDKTVRIWDARTQKSQIIATKGENI 210
V+ G + ++ W T N D +L T S D T + +D +++Q +A + N
Sbjct: 297 VFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDT-LEEAQRVALERYN- 354
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSR--GH 251
++ G I + +D V+ P +T SR GH
Sbjct: 355 DVKAKSKGMEILISGSDDFT----VIMWNPSVTKTSISRLTGH 393
Score = 74 (31.1 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H V + A+S DG+ S D +V I+ + + +GHT V Q+ W +P
Sbjct: 139 HTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTH---TLKGHTNWVLQVAW---SP 192
Query: 110 DL--LSTASGDKTVRIWDARTQK 130
D ++TA + +RIW +T K
Sbjct: 193 DSKKIATAGMEGDIRIWCPQTGK 215
Score = 57 (25.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
GHT +V + +S GD TVRIWD T
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVG-GDTTVRIWDIYT 171
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 120 (47.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 20 PSGSQFHLVCKIDDYVKHFN--THNDI-KEYQAHGSKVHSVAWSC-----DGR-RLASGS 70
P G++ C +D V+ ++ T + E + H V +AW DG RL S S
Sbjct: 205 PDGTRL-ATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSAS 263
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDA 126
D + I+ ++ G E V GH GSV + W A N ++ TAS DKTV++WDA
Sbjct: 264 KDFTARIWTVNT-G--RTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDA 317
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 27 LVCKIDDYVKH-FNTHND----IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF-AL 80
LV DD+ + F+ ND I H +V+ V +S DG +AS +D + ++ A
Sbjct: 384 LVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNAR 443
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
D K +N RGH V Q C + + LL TAS D T+++W+ RT K
Sbjct: 444 DGKF-IN---TLRGHVAPVYQ-CSFSADSRLLVTASKDTTLKVWNVRTGK 488
Score = 114 (45.2 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 134 MLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
M+AS +D + ++ A D K +N RGH V Q C + + LL TAS D T+++
Sbjct: 427 MIASAGWDNATKLWNARDGKF-IN---TLRGHVAPVYQ-CSFSADSRLLVTASKDTTLKV 481
Query: 193 WDARTQK--SQIIATKGENINITWAPNGNTIAVGNKEDLV 230
W+ RT K + + + E + W+P+G + G ++ V
Sbjct: 482 WNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAV 521
Score = 113 (44.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V V+WS DG RLA+ S DK+V I+ + + E+ +GH V + W
Sbjct: 192 KGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSEL--KGHAKWVQGIAWEPL 249
Query: 108 N------PDLLSTASGDKTVRIWDARTQKSQIMLA 136
+ P L+S AS D T RIW T +++ +L+
Sbjct: 250 HLWRDGTPRLVS-ASKDFTARIWTVNTGRTEHVLS 283
Score = 92 (37.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIW 193
L S S D + I+ ++ G E V GH GSV + W A N ++ TAS DKTV++W
Sbjct: 259 LVSASKDFTARIWTVNT-G--RTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW 315
Query: 194 DA 195
DA
Sbjct: 316 DA 317
Score = 66 (28.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 112 LSTASGDKTVRIWDART 128
L+T SGD T RIWDA T
Sbjct: 168 LATGSGDNTARIWDAET 184
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 181 (68.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 61/221 (27%), Positives = 103/221 (46%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 76 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGE---STVFRA 132
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVA 145
HT +V + + + + TAS DKT+++W QK SQ + A S D +
Sbjct: 133 HTATVRSVHFCSDGQSFV-TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 191
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ A D TV++WD RT
Sbjct: 192 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT-CVAAAGMDNTVKVWDVRTH 250
Query: 199 KS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 251 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLME 291
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 53/209 (25%), Positives = 101/209 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V V +S + ++LASGS D + ++ + + ++ + GH +V + +
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQ---SRAYRFTGHKDAVTCVNF 100
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDL----NKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + + +K +
Sbjct: 101 SPSG-HLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVH-FCSDGQSFVTASDDKTI 158
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKS-QIIATKG 207
V+ H S+ Q + W +PD L+ +AS DKTV++WD +++ G
Sbjct: 159 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Query: 208 ENIN-ITWAPNGNTIAVGNKEDLVTFIDV 235
+ + + P+G +A ++ V DV
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 180 (68.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 62/221 (28%), Positives = 103/221 (46%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 7 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRA 63
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVA 145
HT +V + + + + TAS DKTV++W QK SQ + A S D +
Sbjct: 64 HTATVRSVHFCSDGQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 122
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ A D TV++WD RT
Sbjct: 123 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTH 181
Query: 199 KS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 182 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 180 (68.4 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 62/221 (28%), Positives = 103/221 (46%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V H + + H V V +S G LASGS DK+V I+ + KG+ V+R
Sbjct: 45 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE---STVFRA 101
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-----SQ----IMLASGSFDKSVA 145
HT +V + + + + TAS DKTV++W QK SQ + A S D +
Sbjct: 102 HTATVRSVHFCSDGQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 146 IFALDKK-----GDLNKEVV--YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 198
+ A D K ++E V Y H G V + +H + ++ A D TV++WD RT
Sbjct: 161 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDVRTH 219
Query: 199 KS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+ Q +N +++ P+GN + + + + +D+++
Sbjct: 220 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 260
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 55/209 (26%), Positives = 101/209 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H V V +S + ++LASGS D + ++ + + ++ + GH +V + +
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQ---SRAYRFTGHKDAVTCVNF 69
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSVAIFALDKKGDL----NKEV 159
+ LL++ S DKTVRIW + +S + A + +SV F D + + +K V
Sbjct: 70 SPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVH-FCSDGQSFVTASDDKTV 127
Query: 160 -VYRGHTG----SVDQ-LCWHAT---NPD--LLSTASGDKTVRIWDARTQKS-QIIATKG 207
V+ H S+ Q + W +PD L+ +AS DKTV++WD +++ G
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG 187
Query: 208 ENIN-ITWAPNGNTIAVGNKEDLVTFIDV 235
+ + + P+G IA ++ V DV
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 130 (50.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 46/169 (27%), Positives = 80/169 (47%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SVAW+ G LA+ S DKSV ++ +D++ + V HT V + WH +
Sbjct: 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPS 161
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL------NKEV-V 160
+LL++AS D TV+++ + +V A D G ++ V +
Sbjct: 162 Q-ELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRI 220
Query: 161 YRGHT-GSVDQLCWHATNPD--LLSTASGDKTVRIWD-ARTQKSQIIAT 205
+R + G+ + ++P + T SG T I+D A Q + +AT
Sbjct: 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALAT 269
Score = 125 (49.1 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 40/131 (30%), Positives = 59/131 (45%)
Query: 5 VIQFHTPKSPEYKLL-----PSGSQFHLVCKIDDYVKHFNTHND---IKEY--QAHGSKV 54
V+Q P P+ + PSG+ C D ++ + T D K + H V
Sbjct: 6 VLQSRVPAHPDSRCWFLAWNPSGTLL-ASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTV 64
Query: 55 HSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 114
VAWS G LAS SFD + I+ ++ D GH V + W A + +LL+T
Sbjct: 65 RKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-APSGNLLAT 122
Query: 115 ASGDKTVRIWD 125
S DK+V +W+
Sbjct: 123 CSRDKSVWVWE 133
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLL 181
R W S +LAS D+ + I+ + + K V+ GH +V ++ W + L
Sbjct: 18 RCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYL 76
Query: 182 STASGDKTVRIWDARTQKSQIIAT-KG-ENI--NITWAPNGNTIAVGNKEDLV 230
++AS D T IW + + T +G EN ++ WAP+GN +A +++ V
Sbjct: 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV 129
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 54/196 (27%), Positives = 83/196 (42%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGR 64
H P +LL S S DD VK + D + H S V S+A+ G+
Sbjct: 155 HVVWHPSQELLASASY-------DDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQ 207
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
RLAS S D++V I+ G N++ V +GS D W + T SG T I+
Sbjct: 208 RLASCSDDRTVRIWRQYLPG--NEQGV--ACSGS-DP-SWKC-----ICTLSGFHTRTIY 256
Query: 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV------VYRGHTGSVDQLCWHATNP 178
D + LA+ D ++ +F D D + + + H+ V+ + W+ P
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEP 316
Query: 179 DLLSTASGDKTVRIWD 194
LL++ S D V W+
Sbjct: 317 GLLASCSDDGEVAFWE 332
Score = 99 (39.9 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ S DKSV ++ +D++ + V HT V + WH + +LL++AS D TV+++
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQ-ELLASASYDDTVKLY 177
Query: 194 DARTQKSQIIATKGENINITWA----PNGNTIA 222
AT + + W+ P+G +A
Sbjct: 178 QEEGDDWVCCATLEGHESTVWSIAFDPSGQRLA 210
Score = 39 (18.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 8/47 (17%), Positives = 18/47 (38%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
++ W +A +D + + P++ T + HL + S
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHS 303
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 130 (50.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SVAW+ G LA+ S DKSV ++ +D++ + V HT V + WH +
Sbjct: 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161
Query: 108 NPDLLSTASGDKTVRIW 124
+LL++AS D TV+++
Sbjct: 162 Q-ELLASASYDDTVKLY 177
Score = 122 (48.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 5 VIQFHTPKSPEYKLL-----PSGSQFHLVCKIDDYVKHFNTHND---IKEY--QAHGSKV 54
V+Q P P+ + P+G+ C D ++ + T D K + H V
Sbjct: 6 VLQSRVPAHPDSRCWFLAWNPTGTLL-ASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTV 64
Query: 55 HSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 114
VAWS G LAS SFD + I+ ++ D GH V + W A + +LL+T
Sbjct: 65 RKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-APSGNLLAT 122
Query: 115 ASGDKTVRIWD 125
S DK+V +W+
Sbjct: 123 CSRDKSVWVWE 133
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLL 181
R W + +LAS D+ + I+ + + K V+ GH +V ++ W + L
Sbjct: 18 RCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYL 76
Query: 182 STASGDKTVRIWDARTQKSQIIAT-KG-ENI--NITWAPNGNTIAVGNKEDLV 230
++AS D T IW + + T +G EN ++ WAP+GN +A +++ V
Sbjct: 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV 129
Score = 100 (40.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ S DKSV ++ +D++ + V HT V + WH + +LL++AS D TV+++
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLY 177
Query: 194 DARTQKSQIIATKGENINITWA----PNGNTIA 222
AT + + W+ P+G +A
Sbjct: 178 QEEGDDWVCCATLEGHESTVWSIAFDPSGQRLA 210
Score = 39 (18.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 8/47 (17%), Positives = 18/47 (38%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
++ W +A +D + + P++ T + HL + S
Sbjct: 257 DVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHS 303
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 138 (53.6 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 48/147 (32%), Positives = 74/147 (50%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHA 106
+ H ++V VAWS DG LA+ S DKSV I+ D+ G+ + + V + H+ V + WH
Sbjct: 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163
Query: 107 TNPDLLSTASGDKTVRIW-DARTQKSQIMLASG--------SFDKSVAIFALDKKGDLNK 157
+ LL+++S D TVRIW D + + +G FDK+ +F L D +
Sbjct: 164 SEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222
Query: 158 EVVYRGHTGSV--DQLCW--HATNPDL 180
V++ + G DQ W A PD+
Sbjct: 223 VRVWK-YMGDDEDDQQEWVCEAILPDV 248
Score = 129 (50.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 18 LLPSGS---QFHLVC-KIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDK 73
+L +GS + LV K DD+ T D+ + AH + SVAW LA+GSFD
Sbjct: 26 ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80
Query: 74 SVAIFALDKKGDLNKEV----VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
+V+I+A ++ D E+ + GH V + W + + L+T S DK+V IW+
Sbjct: 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW-SNDGYYLATCSRDKSVWIWE 135
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 110 DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV----VYRGHT 165
D+L + K +R R S +LA+GSFD +V+I+A ++ D E+ + GH
Sbjct: 50 DVLDETAHKKAIRSVAWRPHTS--LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE 107
Query: 166 GSVDQLCWHATNPDLLSTASGDKTVRIW--DARTQKSQIIATKGENI----NITWAPNGN 219
V + W + + L+T S DK+V IW D ++ + I+ E+ ++ W P+
Sbjct: 108 NEVKGVAW-SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166
Query: 220 TIAVGNKEDLV 230
+A + +D V
Sbjct: 167 LLASSSYDDTV 177
Score = 88 (36.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKT 189
S+ +LAS S+D +V I+ D D V GH G+V + T L + S D T
Sbjct: 164 SEALLASSSYDDTVRIWK-DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222
Query: 190 VRIW-----DARTQKSQIIAT------KGENINITWAPNGNTIAVGNKEDLVTFIDV 235
VR+W D Q+ + K + N+ W NG +VG L + +V
Sbjct: 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 130 (50.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SVAW+ G LA+ S DKSV ++ +D++ + V HT V + WH +
Sbjct: 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161
Query: 108 NPDLLSTASGDKTVRIW 124
+LL++AS D TV+++
Sbjct: 162 Q-ELLASASYDDTVKLY 177
Score = 120 (47.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V VAWS G LAS SFD + I+ ++ D GH V + W A
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD-DFECVTTLEGHENEVKSVAW-AP 115
Query: 108 NPDLLSTASGDKTVRIWD 125
+ +LL+T S DK+V +W+
Sbjct: 116 SGNLLATCSRDKSVWVWE 133
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 111 LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
LL R W + +LAS D+ + I+ + + K V+ GH +V +
Sbjct: 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRK 66
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-KG-ENI--NITWAPNGNTIAVGNK 226
+ W + L++AS D T IW + + T +G EN ++ WAP+GN +A ++
Sbjct: 67 VAWSPCG-NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 227 EDLV 230
+ V
Sbjct: 126 DKSV 129
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 53/195 (27%), Positives = 83/195 (42%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCDGR 64
H P +LL S S DD VK + D + H S V S+A+ G+
Sbjct: 155 HVVWHPSQELLASASY-------DDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ 207
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
RLAS S D++V I+ G N++ V +GS D W + T SG + I+
Sbjct: 208 RLASCSDDRTVRIWRQYLPG--NEQGV--ACSGS-DP-SWKC-----ICTLSGFHSRTIY 256
Query: 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV------VYRGHTGSVDQLCWHATNP 178
D + LA+ D ++ +F D D + +++ H+ V+ + W+ P
Sbjct: 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP 316
Query: 179 DLLSTASGDKTVRIW 193
LL++ S D V W
Sbjct: 317 GLLASCSDDGEVAFW 331
Score = 99 (39.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ S DKSV ++ +D++ + V HT V + WH + +LL++AS D TV+++
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLY 177
Query: 194 DARTQKSQIIATKGENINITWA----PNGNTIA 222
AT + + W+ P+G +A
Sbjct: 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQRLA 210
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
+I W +A +D + + P++ T + HL + S
Sbjct: 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHS 303
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 130 (50.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SVAW+ G LA+ S DKSV ++ +D++ + V HT V + WH +
Sbjct: 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161
Query: 108 NPDLLSTASGDKTVRIW 124
+LL++AS D TV+++
Sbjct: 162 Q-ELLASASYDDTVKLY 177
Score = 120 (47.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V VAWS G LAS SFD + I+ ++ D GH V + W A
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNED-DFECVTTLEGHENEVKSVAW-AP 115
Query: 108 NPDLLSTASGDKTVRIWD 125
+ +LL+T S DK+V +W+
Sbjct: 116 SGNLLATCSRDKSVWVWE 133
Score = 120 (47.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 111 LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
LLS R W + +LAS D+SV I+ + + K V+ GH +V +
Sbjct: 7 LLSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRK 66
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-KG-ENI--NITWAPNGNTIAVGNK 226
+ W + L++AS D T IW + + T +G EN ++ WAP+GN +A ++
Sbjct: 67 VAWSPCG-NYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR 125
Query: 227 EDLV 230
+ V
Sbjct: 126 DKSV 129
Score = 99 (39.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ S DKSV ++ +D++ + V HT V + WH + +LL++AS D TV+++
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLY 177
Query: 194 DARTQKSQIIATKGENINITWA----PNGNTIA 222
AT + + W+ P+G +A
Sbjct: 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQRLA 210
Score = 40 (19.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
++ W T+A +D + + P++ T + H+ + S
Sbjct: 257 DVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHS 303
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 175 (66.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/248 (26%), Positives = 117/248 (47%)
Query: 8 FHTPK--SPEYKLLPSGSQFHLVC--KIDDYVKHFNTHNDIKEY--QAHGSKVHSVAWSC 61
+HT + + E L Q LV +D K ++ N + Y + H +++ S++++
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNT 229
Query: 62 DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGH-----------------TGSVDQLC- 103
G R+ +GSFD +V ++ D +N + GH TGS+D+ C
Sbjct: 230 SGDRIITGSFDHTVVVWDADTGRKVN---ILIGHCAEISSASFNWDCSLILTGSMDKTCK 286
Query: 104 -WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR 162
W ATN ++T +G I D+ + ++A+ S D + IF+ + + K
Sbjct: 287 LWDATNGKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARIFSAATRKCIAK---LE 342
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNT 220
GH G + ++ ++ LL T S DKT RIWDA+T Q Q++ + I + + GN
Sbjct: 343 GHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Query: 221 IAVGNKED 228
+ G+K++
Sbjct: 402 VITGSKDN 409
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
K +AH + +VA + G +GS+D++ ++ +LN GH V + +
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELN---TLEGHRNVVYAIAF 142
Query: 105 HATNPDLLSTASGDKTVRIWDARTQK---------SQIMLASGSFDKS-VAIFALD---K 151
+ D ++T S DKT ++W T K ++I+ S + + VA ++D K
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 152 KGDL-NKEVVY--RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQII 203
D+ N E VY RGH+ + L ++ T+ D + T S D TV +WDA T +K I+
Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFN-TSGDRIITGSFDHTVVVWDADTGRKVNIL 257
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 173 (66.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 73 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 131
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 132 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 187
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 188 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 247
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 248 SYLLSNAM-DNTVRVWDVR 265
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 121
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 272
Score = 113 (44.8 bits), Expect = 0.00052, P = 0.00052
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 123 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 178
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 234
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 173 (66.0 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 249 SYLLSNAM-DNTVRVWDVR 266
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 122
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 273
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 124 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 179
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 235
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 173 (66.0 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 249 SYLLSNAM-DNTVRVWDVR 266
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 122
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 273
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 124 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 179
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 235
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 173 (66.0 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 249 SYLLSNAM-DNTVRVWDVR 266
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 122
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 273
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 124 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 179
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 235
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 173 (66.0 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAV 188
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 249 SYLLSNAM-DNTVRVWDVR 266
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 122
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 183 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 273
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 124 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 179
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 180 WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 235
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 173 (66.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 65/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + +N + D Y + H V + ++ DG L S S DK
Sbjct: 73 KFHPNGSTL-ASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 131
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 132 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 187
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 188 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 247
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 248 SYLLSNAM-DNTVRVWDVR 265
Score = 129 (50.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 50/213 (23%), Positives = 103/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 121
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 272
Score = 113 (44.8 bits), Expect = 0.00066, P = 0.00066
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 123 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 178
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 179 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 234
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 126 (49.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 26 HLVCKIDDYVKHF-----NTHNDIKEYQAHGSKVHSVAWSCDGRRLA-SGSFDKSVAIFA 79
H I DY+KH NT N + + H + + ++W+ + L S S D++V +
Sbjct: 142 HADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
Query: 80 LDKK----GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
++ G+L + V++GH V+ + WH + + + DK + IWD RT
Sbjct: 202 INANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRT 254
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ +A++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 263 AHSAEVNCLAFNPYSEFILATGSADKTVALW--DLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ DK + +WD S+I G D+S A A D +L ++ GHT
Sbjct: 321 NETILASSGTDKRLHVWDL----SKI----GE-DQS-AEDAEDGPPELL--FIHGGHTAK 368
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D +++W
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVW 394
Score = 92 (37.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ DK +
Sbjct: 277 SEFILATGSADKTVALW--DLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL 334
Query: 191 RIWD 194
+WD
Sbjct: 335 HVWD 338
Score = 91 (37.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG---ENINITWAPNGNT 220
H+ V+ L ++ + +L+T S DKTV +WD R + ++ + + E + W+P+ T
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNET 323
Query: 221 IAVGNKED 228
I + D
Sbjct: 324 ILASSGTD 331
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
A+ + N + +GHT L W+ L+ +AS D+TV WD ++
Sbjct: 155 AVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQN 207
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 126 (49.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 26 HLVCKIDDYVKHF-----NTHNDIKEYQAHGSKVHSVAWSCDGRRLA-SGSFDKSVAIFA 79
H I DY+KH NT N + + H + + ++W+ + L S S D++V +
Sbjct: 142 HADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
Query: 80 LDKK----GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
++ G+L + V++GH V+ + WH + + + DK + IWD RT
Sbjct: 202 INANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRT 254
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ +A++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 263 AHSAEVNCLAFNPYSEFILATGSADKTVALW--DLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ DK + +WD S+I G D+S A A D +L ++ GHT
Sbjct: 321 NETILASSGTDKRLHVWDL----SKI----GE-DQS-AEDAEDGPPELL--FIHGGHTAK 368
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D +++W
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVW 394
Score = 92 (37.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ DK +
Sbjct: 277 SEFILATGSADKTVALW--DLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRL 334
Query: 191 RIWD 194
+WD
Sbjct: 335 HVWD 338
Score = 91 (37.1 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG---ENINITWAPNGNT 220
H+ V+ L ++ + +L+T S DKTV +WD R + ++ + + E + W+P+ T
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNET 323
Query: 221 IAVGNKED 228
I + D
Sbjct: 324 ILASSGTD 331
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
A+ + N + +GHT L W+ L+ +AS D+TV WD ++
Sbjct: 155 AVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQN 207
>UNIPROTKB|E1BRJ9 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00823063
Ensembl:ENSGALT00000039543 ArrayExpress:E1BRJ9 Uniprot:E1BRJ9
Length = 894
Score = 124 (48.7 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN---INITW 214
E V RGHT + + +H DLL ++S D TVRIWD + +++ +G ++ W
Sbjct: 585 EAVLRGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWDLGAGR-EVLCLQGHTDQIFSLAW 643
Query: 215 APNGNTIAVGNKEDLVTFIDVVKSLPPRE 243
+P+G +A +K+ + + SL P++
Sbjct: 644 SPDGRKLATVSKDGRLRLFEPRCSLQPQQ 672
Score = 103 (41.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHA 106
+AHG ++ S++W DGR L + DK + IF D + GH + D +L W
Sbjct: 165 EAHGDQLQSLSWKHDGRLLGTSCKDKKLRIF--DPRASPAASQSVPGHENNKDSRLLWMG 222
Query: 107 TNPDLLSTASG---DKTVRIWDAR 127
+ L+S ++ V++WD R
Sbjct: 223 ASDCLISVGFSQMREREVKLWDTR 246
Score = 77 (32.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 66 LASGSFDKSVAIFALDKKG-DLNKEV-VYRGHTG-SVDQLCWHATNPDLLSTASGDKTVR 122
LA+GS D+ V ++ L ++G +L + G G +VD L +H T +L++ G K V
Sbjct: 93 LATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFHPTADGILTSGVG-KRVT 151
Query: 123 IWDARTQK 130
+WD Q+
Sbjct: 152 VWDVGQQQ 159
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG 138
H+ +V + +P LL+T S D+ V++W + ++ ++G
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAG 119
>UNIPROTKB|F1NP32 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00818031
Ensembl:ENSGALT00000012652 ArrayExpress:F1NP32 Uniprot:F1NP32
Length = 894
Score = 124 (48.7 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN---INITW 214
E V RGHT + + +H DLL ++S D TVRIWD + +++ +G ++ W
Sbjct: 585 EAVLRGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWDLGAGR-EVLCLQGHTDQIFSLAW 643
Query: 215 APNGNTIAVGNKEDLVTFIDVVKSLPPRE 243
+P+G +A +K+ + + SL P++
Sbjct: 644 SPDGRKLATVSKDGRLRLFEPRCSLQPQQ 672
Score = 103 (41.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHA 106
+AHG ++ S++W DGR L + DK + IF D + GH + D +L W
Sbjct: 165 EAHGDQLQSLSWKHDGRLLGTSCKDKKLRIF--DPRASPAASQSVPGHENNKDSRLLWMG 222
Query: 107 TNPDLLSTASG---DKTVRIWDAR 127
+ L+S ++ V++WD R
Sbjct: 223 ASDCLISVGFSQMREREVKLWDTR 246
Score = 77 (32.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 66 LASGSFDKSVAIFALDKKG-DLNKEV-VYRGHTG-SVDQLCWHATNPDLLSTASGDKTVR 122
LA+GS D+ V ++ L ++G +L + G G +VD L +H T +L++ G K V
Sbjct: 93 LATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFHPTADGILTSGVG-KRVT 151
Query: 123 IWDARTQK 130
+WD Q+
Sbjct: 152 VWDVGQQQ 159
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG 138
H+ +V + +P LL+T S D+ V++W + ++ ++G
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAG 119
>UNIPROTKB|E1BR57 [details] [associations]
symbol:PAM16 "Coronin" species:9031 "Gallus gallus"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:AADN02049338 EMBL:AADN02049339
EMBL:AADN02049340 EMBL:AADN02049341 EMBL:AADN02049342
EMBL:AADN02049343 EMBL:AADN02049344 IPI:IPI00819431
Ensembl:ENSGALT00000039544 ArrayExpress:E1BR57 Uniprot:E1BR57
Length = 895
Score = 124 (48.7 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN---INITW 214
E V RGHT + + +H DLL ++S D TVRIWD + +++ +G ++ W
Sbjct: 586 EAVLRGHTEKIYSIRFHPVAADLLVSSSYDMTVRIWDLGAGR-EVLCLQGHTDQIFSLAW 644
Query: 215 APNGNTIAVGNKEDLVTFIDVVKSLPPRE 243
+P+G +A +K+ + + SL P++
Sbjct: 645 SPDGRKLATVSKDGRLRLFEPRCSLQPQQ 673
Score = 103 (41.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHA 106
+AHG ++ S++W DGR L + DK + IF D + GH + D +L W
Sbjct: 165 EAHGDQLQSLSWKHDGRLLGTSCKDKKLRIF--DPRASPAASQSVPGHENNKDSRLLWMG 222
Query: 107 TNPDLLSTASG---DKTVRIWDAR 127
+ L+S ++ V++WD R
Sbjct: 223 ASDCLISVGFSQMREREVKLWDTR 246
Score = 77 (32.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 66 LASGSFDKSVAIFALDKKG-DLNKEV-VYRGHTG-SVDQLCWHATNPDLLSTASGDKTVR 122
LA+GS D+ V ++ L ++G +L + G G +VD L +H T +L++ G K V
Sbjct: 93 LATGSADEMVKVWRLPEEGQELPSSAGLMLGPGGGTVDMLQFHPTADGILTSGVG-KRVT 151
Query: 123 IWDARTQK 130
+WD Q+
Sbjct: 152 VWDVGQQQ 159
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG 138
H+ +V + +P LL+T S D+ V++W + ++ ++G
Sbjct: 76 HSDAVTDFDFSPFDPFLLATGSADEMVKVWRLPEEGQELPSSAG 119
>WB|WBGene00009341 [details] [associations]
symbol:thoc-3 species:6239 "Caenorhabditis elegans"
[GO:0000347 "THO complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 KO:K12880 EMBL:Z81523 GeneTree:ENSGT00700000104559
OMA:LAYACDD RefSeq:NP_492416.2 UniGene:Cel.18802
ProteinModelPortal:P91867 SMR:P91867 STRING:P91867 PaxDb:P91867
EnsemblMetazoa:F32H2.4 GeneID:172713 KEGG:cel:CELE_F32H2.4
UCSC:F32H2.4 CTD:172713 WormBase:F32H2.4 HOGENOM:HOG000115395
InParanoid:P91867 NextBio:876703 Uniprot:P91867
Length = 331
Score = 149 (57.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 33 DYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92
D +F + I+ + S+A++CDG +L G+FDK V++ +D G L V
Sbjct: 18 DASTYFEKYKRIRSTDMKVQQCQSIAFNCDGTKLVCGAFDKKVSVANVDG-GRLRFSWVG 76
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
H+ SV+Q+ P+L ++AS D+ + +WD R K
Sbjct: 77 SSHSSSVEQVACSEKQPNLFASASADRNICVWDIRQSK 114
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 119 KTVRIWDARTQKSQIM--------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
K +R D + Q+ Q + L G+FDK V++ +D G L V H+ SV+Q
Sbjct: 27 KRIRSTDMKVQQCQSIAFNCDGTKLVCGAFDKKVSVANVDG-GRLRFSWVGSSHSSSVEQ 85
Query: 171 LCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENINITWAPNGNTIAVGNKEDL 229
+ P+L ++AS D+ + +WD R K + I+ + N I+W+P +K++
Sbjct: 86 VACSEKQPNLFASASADRNICVWDIRQSKPTHRISNRVGNFFISWSPCDEYFIFLDKDNR 145
Query: 230 VTFIDV 235
+ +D+
Sbjct: 146 INTVDI 151
Score = 60 (26.2 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
+LASGS D S+ I A G E+ + G T SV WH + L TAS
Sbjct: 265 LLASGSEDHSIDI-AYVPDGSRCHEIKHTGETYSV---AWHPNSLLLAYTAS 312
Score = 59 (25.8 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI-W 193
LA G+ D S +++ L++ + + V+ R H + + + + N LL++ S D ++ I +
Sbjct: 224 LAVGASDASCSLWDLEEL--ICERVIPR-HDYGIRAVSF-SCNGQLLASGSEDHSIDIAY 279
Query: 194 DARTQKSQIIATKGENINITWAPNGNTIA 222
+ I GE ++ W PN +A
Sbjct: 280 VPDGSRCHEIKHTGETYSVAWHPNSLLLA 308
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 174 (66.3 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 61/192 (31%), Positives = 97/192 (50%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V V S ASGS D++ +++ D+
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTY 417
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + L+T S DKTVR+W A+ Q + + L +G
Sbjct: 418 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVL 472
Query: 139 --SFD---KSVAIFALDKK---GDLNKEVVY---RGHTGSVDQLCWHATNPD--LLSTAS 185
SF K +A D++ DL ++ RGHT S+ L A +PD L+++AS
Sbjct: 473 SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSL---AFSPDSGLIASAS 529
Query: 186 GDKTVRIWDART 197
D +VR+WD R+
Sbjct: 530 MDNSVRVWDIRS 541
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WD + ASGS D++ +++ D+ L +Y GH VD + +H N + L+
Sbjct: 387 VWDVDISPFSLYFASGSHDRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNYLA 442
Query: 183 TASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T S DKTVR+W A+ S + T +G ++++++PNG +A ++ + D+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 241 PRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 503 FKEL----RGHTDSITSL 516
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 177 (67.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 78/266 (29%), Positives = 130/266 (48%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGS 70
SP+ K L SGS DD VK ++ T ++ H V S+A+S DG+ LASGS
Sbjct: 759 SPDGKQLVSGSY-------DDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGS 811
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
+D ++ ++ G+L + + GH S+ + + +L S AS D T++IWD T +
Sbjct: 812 YDNTIDLWD-SATGELLQ--TFEGHPHSIWSVAFAPDGKELAS-ASDDSTIKIWDLATGE 867
Query: 131 SQIMLASGSFD-KSVAIFALDKK----GDLNKEV-VYRGHTGSVDQLC-----WH---AT 176
Q L S S +SVA F+ D K L+ + V+ TG + Q W A
Sbjct: 868 LQQTLDSHSQSVRSVA-FSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 177 NPDLLSTASGDK--TVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKEDLVTF 232
+PD ASG + TV++W+ T + Q + +++ ++ ++P+G +A + + T
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSD---TT 983
Query: 233 IDVVKSLPPRERTLTSRGHLMETRSL 258
I + S E T +GH + R++
Sbjct: 984 IKLWNSTTG-ELQQTFKGHDLWIRAV 1008
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H V SV +S DG++L SGS+D +V I+ G+L + + GH+G+V+ L A +P
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWD-PATGELLQTL--DGHSGTVESL---AFSP 802
Query: 110 D--LLSTASGDKTVRIWDART-QKSQIM------------------LASGSFDKSVAIFA 148
D LL++ S D T+ +WD+ T + Q LAS S D ++ I+
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Query: 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQ--IIA 204
L G+L + + H+ SV + A +PD LL+++S D T+++W+ T + Q +
Sbjct: 863 L-ATGELQQTL--DSHSQSVRSV---AFSPDGKLLASSSLDSTIKVWNPATGELQQSLEG 916
Query: 205 TKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
G ++ ++P+G +A G++++ V + E T GH RS+
Sbjct: 917 RSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATG----ELLQTLEGHSQSVRSV 966
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 60/248 (24%), Positives = 114/248 (45%)
Query: 6 IQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFN-THNDIKE-YQAHGSKVHSVAWSCDG 63
++ H+ P G Q D +K +N T ++++ ++ H + +VA+S DG
Sbjct: 956 LEGHSQSVRSVAFSPDGKQL-ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
+ L SGS D ++ ++ L +L + + H+ SV + + + L S+ S D T+++
Sbjct: 1015 KHLVSGSDDNTIKLWDL-ATSELQQSL--EDHSRSVHAVAFSPDDKQLASS-SLDSTIKL 1070
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKK----GDLNKEV-VYRGHTGSVDQLC-----W 173
WD+ T + Q L S F+ D K + + ++ TG + Q W
Sbjct: 1071 WDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDW 1130
Query: 174 H---ATNPDLLSTASG--DKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNK 226
A +PD ASG D T+++WD+ T + Q + + I ++ ++P+G +A G+
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSY 1190
Query: 227 EDLVTFID 234
+ D
Sbjct: 1191 DQTAKLWD 1198
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 68/244 (27%), Positives = 122/244 (50%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ K L SGS + + K+ D T + + H VH+VA+S D ++LAS S D
Sbjct: 1011 SPDGKHLVSGSDDNTI-KLWDLA----TSELQQSLEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 130
++ ++ G+L + + GH+ V + + +PD LL++ S D T+++W+ T +
Sbjct: 1066 STIKLWD-SATGELQRTL--EGHSQGVRSVTF---SPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 131 SQIMLASGS-FDKSVAIFALDKK----GDLNKEV-VYRGHTGSVDQ-LCWHAT------- 176
Q L S + SVA F+ D K G + + ++ TG + Q L H+
Sbjct: 1120 LQQTLTGRSDWVDSVA-FSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVF 1178
Query: 177 NPD--LLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKEDLVTF 232
+PD LL++ S D+T ++WD T + QI + + ++ ++P+G +A + + +
Sbjct: 1179 SPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKL 1238
Query: 233 IDVV 236
D V
Sbjct: 1239 WDPV 1242
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 61/243 (25%), Positives = 112/243 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ KLL SGS + + D T ++ ++ H + SVA++ DG+ LAS S D
Sbjct: 801 SPDGKLLASGSYDNTIDLWDSA-----TGELLQTFEGHPHSIWSVAFAPDGKELASASDD 855
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
++ I+ L G+L + + H+ SV + + L S++ A + Q
Sbjct: 856 STIKIWDL-ATGELQQTL--DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQ 912
Query: 133 IMLASGSFDKSVAIFALDKK----GDLNKEVVYRGHTGSVDQ-LCWH-------ATNPD- 179
+ + KSVA KK + N ++ TG + Q L H A +PD
Sbjct: 913 SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDG 972
Query: 180 -LLSTASGDKTVRIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
L+++S D T+++W++ T + Q KG ++ + ++P+G + G+ ++ + D+
Sbjct: 973 KQLASSSSDTTIKLWNSTTGELQQ-TFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDL 1031
Query: 236 VKS 238
S
Sbjct: 1032 ATS 1034
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ K L SG + K+ D T ++ + H ++ SV +S DG+ LASGS+D
Sbjct: 1137 SPDGKQLASG-YYDSTIKLWDSA----TGELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 130
++ ++ G+L + ++ GH+ V+ + A +PD LL+++S +T+++WD T
Sbjct: 1192 QTAKLWD-PATGELLQ--IFEGHSKWVESV---AFSPDGKLLASSSYGETIKLWDPVT-- 1243
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+++ D+S A G+ V D W +LL G
Sbjct: 1244 GELLQTLNDPDESAGSVAFSPDGNRLASV------DIFDTKIWDPATGELLQALKGHSKW 1297
Query: 191 RIWDART 197
+W +RT
Sbjct: 1298 -VW-SRT 1302
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 169 (64.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/184 (33%), Positives = 89/184 (48%)
Query: 32 DDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
D + +N + D Y + H V + ++ DG L S S DK+VA++ + G+ K
Sbjct: 114 DRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVK 172
Query: 89 EVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART-------QKSQIMLASGSF 140
+ +GHT V+ C+ A P L+ T S D TV++WD R Q + +LA
Sbjct: 173 RL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFN 229
Query: 141 DKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
D S I + +D K DL + ++ Y RGH SV L + LLS A D TVRI
Sbjct: 230 DTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRI 288
Query: 193 WDAR 196
WD R
Sbjct: 289 WDVR 292
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/213 (23%), Positives = 102/213 (47%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + G LAS FD+ + ++ + GD + +GH+G+V +L ++ T+
Sbjct: 92 HEGEVYCCKFHPWGNTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAVMELHYN-TDG 148
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 208
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 209 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 267
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 268 LSLSSEGSYLLSNAMDNTVRIWDV-RPFAPKER 299
Score = 113 (44.8 bits), Expect = 0.00059, P = 0.00059
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 150 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 205
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 206 WDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 261
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 168 (64.2 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 64/199 (32%), Positives = 94/199 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDK 73
K P+GS D + ++ + D Y + H V + ++ DG L S S DK
Sbjct: 74 KFHPNGSTL-ASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 132
Query: 74 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDART---- 128
+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++WD R
Sbjct: 133 TVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKLWDIRKKAAI 188
Query: 129 ---QKSQIMLASGSFDKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATN 177
Q + +LA D S I + +D K DL + ++ Y RGH SV L +
Sbjct: 189 QTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEG 248
Query: 178 PDLLSTASGDKTVRIWDAR 196
LLS A D TVR+WD R
Sbjct: 249 SYLLSNAM-DNTVRVWDVR 266
Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/213 (23%), Positives = 104/213 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS FD+ + ++++ GD + +GH+G+V +L ++ T+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWSV--YGDCDNYATLKGHSGAVMELHYN-TDG 122
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS----------VAIFALD---KKGDL 155
+L +AS DKTV +WD+ T ++ + + SF S V + D K D+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 156 NKEVVYRG--HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENIN- 211
K+ + +T V + ++ T+ ++S D +++WD R K + + +++
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
++ + G+ + ++ V DV + P+ER
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDV-RPFAPKER 273
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRI 192
ML S S DK+VA++ + G+ K + +GHT V+ C+ A P L+ T S D TV++
Sbjct: 124 MLFSASTDKTVAVWD-SETGERVKRL--KGHTSFVNS-CYPARRGPQLVCTGSDDGTVKL 179
Query: 193 WDARTQKS-QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH 251
WD R + + Q + + +T+ + I G ++ + D L + T T RGH
Sbjct: 180 WDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD----LRQNKLTYTMRGH 235
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 123 (48.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS SFDKSV ++ G K + RGH G V Q+ W A + LL + S D T++++
Sbjct: 375 IASASFDKSVKLWC----GRTGKYLASLRGHVGPVYQVAWSADSR-LLVSGSADSTLKVF 429
Query: 194 DARTQKSQI-IATKGENI-NITWAPNGNTIAVGNKEDLV 230
+ +T+ + G+ + + W+P G + G K+ ++
Sbjct: 430 ELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVL 468
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 40 THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGS 98
T I H V+ V +S D R +AS SFDKSV ++ G K + RGH G
Sbjct: 349 TKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWC----GRTGKYLASLRGHVGP 404
Query: 99 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALD 150
V Q+ W A + LL + S D T+++++ +T KS G D+ +F +D
Sbjct: 405 VYQVAWSADSR-LLVSGSADSTLKVFELKT-KSLYYDLPGHGDE---VFTVD 451
Score = 92 (37.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
HG V S +S DGR LASGS D+++ I+ ++ + L+ + H V + W +P
Sbjct: 104 HGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLH---TCKSHKSWVLCIAW---SP 157
Query: 110 DLLSTASGDKT--VRIWDART 128
D AS K + IW+A+T
Sbjct: 158 DATKIASACKNGEICIWNAKT 178
Score = 83 (34.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ + L SGS + +I D H ++H S V +AWS D ++AS +
Sbjct: 114 SPDGRGLASGSGDQTM-RIWDIELELPLHT----CKSHKSWVLCIAWSPDATKIASACKN 168
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD----LLSTASGDKTVRIWDART 128
+ I+ K G+ + + R H + L W + D LL++ D + IWD
Sbjct: 169 GEICIWNA-KTGEQIGKTLKR-HKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDT-V 225
Query: 129 QKSQIMLASG 138
Q + + SG
Sbjct: 226 QGTVVRCLSG 235
Score = 70 (29.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 6 IQFHTPKSPEYKLL-----PSGSQFHLVCKIDDY-VKHFNTHNDI-KEYQAHGSKVHSVA 58
+ HT KS + +L P ++ CK + + + T I K + H + S+A
Sbjct: 138 LPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLA 197
Query: 59 W-------SCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 111
W +C R LAS D ++ I+ +G + + GHT SV L W L
Sbjct: 198 WQPMHKDPTC--RLLASCGKDGNIFIWDT-VQGTVVR--CLSGHTASVTCLRWGGEG--L 250
Query: 112 LSTASGDKTVRIWDA 126
+ + S D+TV++W A
Sbjct: 251 IYSGSQDRTVKMWRA 265
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 169 (64.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 53/175 (30%), Positives = 83/175 (47%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHAT 107
H S+V SV+WS G LA+ S DKS+ I+ + GD N E V + H G V + WH
Sbjct: 145 HDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPA 204
Query: 108 NPDLLSTASGDKTVRIWDARTQK-SQIMLASGSFDKSVAIFALDKKGDLNKEV--VYRGH 164
+ L++ S D T+RIW Q+ G + ++ +D + N G
Sbjct: 205 E-ECLASGSYDDTIRIWREDIDDWGQVACIKGH---TGTVWGIDWEDAENVPFPSTSNGV 260
Query: 165 TGSVDQL-CWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITWAPNG 218
+G ++ WHA + L + S D++VR+W R K+Q+ +I P+G
Sbjct: 261 SGQEEEWKTWHALSGPRLVSCSHDQSVRVW-RRQPKAQLNTAGASSIPSIIRPSG 314
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 53/211 (25%), Positives = 92/211 (43%)
Query: 66 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW--HATNPDLLSTASGDKTVRI 123
+A+ S DK+V +++L L+ + GH S+ W + + +L+T S D TV I
Sbjct: 42 VATCSSDKTVRVYSLVNFRLLS--TISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGI 99
Query: 124 WDARTQKSQI-MLASGSFDKSVAIFAL--DKKGDLNKE----VVYRGHTGSVDQLCWHAT 176
W + LA G+ K+ F D++ D + E V+ GH V + W A+
Sbjct: 100 WRRWDDYGEEETLAQGN--KNTKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSAS 157
Query: 177 NPDLLSTASGDKTVRIWDARTQKSQIIAT-------KGENINITWAPNGNTIAVGNKEDL 229
LL+T S DK++ IW+ T +G+ + W P +A G+ +D
Sbjct: 158 GM-LLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPAEECLASGSYDDT 216
Query: 230 VTFIDVVKSLPPRERTLTSRGHLMETRSLWG 260
+ + + + +GH T ++WG
Sbjct: 217 IRIWR--EDIDDWGQVACIKGH---TGTVWG 242
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 38/120 (31%), Positives = 52/120 (43%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 98
N + Q H V VAW LASGS+D ++ I+ D D + +GHTG+
Sbjct: 181 NNFETVAVMQEHEGDVKCVAWHPAEECLASGSYDDTIRIWREDID-DWGQVACIKGHTGT 239
Query: 99 VDQLCWH-ATNPDLLSTASG-DKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
V + W A N ST++G W S L S S D+SV ++ K LN
Sbjct: 240 VWGIDWEDAENVPFPSTSNGVSGQEEEWKTWHALSGPRLVSCSHDQSVRVWRRQPKAQLN 299
>UNIPROTKB|F1RK53 [details] [associations]
symbol:LOC100513346 "Coronin" species:9823 "Sus scrofa"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 OMA:EVEFARC
EMBL:FP475964 Ensembl:ENSSSCT00000008707 ArrayExpress:F1RK53
Uniprot:F1RK53
Length = 923
Score = 112 (44.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIIATKGENINITWA 215
E V GHT + L +H D+L+++S D T+RIWD A ++ ++ + + + W+
Sbjct: 585 EAVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQAGVERLRLQGHRDQIFGLAWS 644
Query: 216 PNGNTIAVGNKE 227
PNG +A K+
Sbjct: 645 PNGQQLATVCKD 656
Score = 111 (44.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 42/143 (29%), Positives = 62/143 (43%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
V+QFH P + L +G K+ D + + E AHG V S WS DG
Sbjct: 131 VLQFH-PSADGVLLSAAGKAL----KVWDAARQ----QPLTELAAHGDLVQSAIWSQDGA 181
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASG---DKT 120
+ + DK + IF K + ++ + H S D +L W T L+ST ++
Sbjct: 182 LVGTTCKDKQLRIFDPRAKPEASQST--QAHENSRDGRLVWTGTREHLVSTGFNQMRERE 239
Query: 121 VRIWDARTQKSQIMLASGSFDKS 143
V++WD R LAS + D S
Sbjct: 240 VKLWDIRLFSGA--LASLTLDAS 260
Score = 90 (36.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 31/135 (22%), Positives = 65/135 (48%)
Query: 134 MLASGSFDKSVAIFALDKKGDL---NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+LA+ S D++V ++ L G +V V+ L +H + +L +A+G K +
Sbjct: 92 LLATASADRTVKLWRLPAPGQALPSGPGLVLGPEDVPVEVLQFHPSADGVLLSAAG-KAL 150
Query: 191 RIWDA-RTQKSQIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTS 248
++WDA R Q +A G+ + + W+ +G + K+ + D ++ P ++ +
Sbjct: 151 KVWDAARQQPLTELAAHGDLVQSAIWSQDGALVGTTCKDKQLRIFDP-RAKPEASQSTQA 209
Query: 249 RGHLMETRSLW-GTK 262
+ + R +W GT+
Sbjct: 210 HENSRDGRLVWTGTR 224
Score = 73 (30.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 75 VAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ I L+ +G+ + V + G H+ V L + + LL+TAS D+TV++W
Sbjct: 55 LGIVPLEGQGEDKRHVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLW 105
Score = 70 (29.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 50 HGSKVHSVAWS-CDGRRLASGSFDKSVAIFALDKKGDL---NKEVVYRGHTGSVDQLCWH 105
H V + +S D LA+ S D++V ++ L G +V V+ L +H
Sbjct: 76 HSDLVTDLDFSPFDDFLLATASADRTVKLWRLPAPGQALPSGPGLVLGPEDVPVEVLQFH 135
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLAS-GSFDKSVAIFALD 150
+ +L +A+G K +++WDA Q+ LA+ G +S AI++ D
Sbjct: 136 PSADGVLLSAAG-KALKVWDAARQQPLTELAAHGDLVQS-AIWSQD 179
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/222 (28%), Positives = 105/222 (47%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNK 88
D +K + H+ + + Q HG V+++A S D L +G+F+ + A + A D +G L K
Sbjct: 266 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDLQGSL-K 323
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------SQIM- 134
E+ R S L P+ L + S D T+ +W K +Q++
Sbjct: 324 ELKERA--SSRYNLV-RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 380
Query: 135 ------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGD 187
+AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D
Sbjct: 381 SPDSRIVASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSD 435
Query: 188 KTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
T+++WD + QK + + E + W+P+G +A G K+
Sbjct: 436 STLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLAS 68
S Y L+ LV DD+ ++ D K H + ++ V +S D R +AS
Sbjct: 330 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 389
Query: 69 GSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
SFDKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD +
Sbjct: 390 ASFDKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVK 444
Query: 128 TQKSQIMLASGSFDKSVAIFALDKKGD 154
QK L G D+ ++A+D D
Sbjct: 445 AQKLATDLP-GHADE---VYAVDWSPD 467
Score = 108 (43.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 36/129 (27%), Positives = 61/129 (47%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + G + V S++WS DG++LASG
Sbjct: 123 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGC 175
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTVRIWDA 126
+ V ++ D L GH+ + L W NP+ ++++S D +VR+WD
Sbjct: 176 KNGQVLLW--DPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT 233
Query: 127 RTQKSQIML 135
+ + +L
Sbjct: 234 TAGRCERIL 242
Score = 88 (36.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW--- 164
Query: 108 NPDLLSTASGDKT--VRIWDART 128
+PD ASG K V +WD T
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPST 187
Score = 87 (35.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 135 LASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 190
L SGS D ++ ++ A DKK L + GH ++Q+ + +PD ++++AS DK++
Sbjct: 344 LVSGSDDFTLFLWSPAEDKK-PLARMT---GHQALINQVLF---SPDSRIVASASFDKSI 396
Query: 191 RIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
++WD RT K + + +G I W+ + + G+ + + DV
Sbjct: 397 KLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 77 (32.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
R +AS S D SV ++ D E + GHT SV L W LL +AS D+T+++
Sbjct: 217 RYVASSSKDGSVRVW--DTTAG-RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 271
Query: 124 WDA 126
W A
Sbjct: 272 WRA 274
Score = 73 (30.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 33/131 (25%), Positives = 55/131 (41%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTV 190
LASG + V ++ D L GH+ + L W NP+ ++++S D +V
Sbjct: 171 LASGCKNGQVLLW--DPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 191 RIWDARTQKSQIIATKGENINIT---WAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLT 247
R+WD + + I T G ++T W +G + + + L RTL
Sbjct: 229 RVWDTTAGRCERILT-GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLC---RTLQ 284
Query: 248 SRGHLMETRSL 258
GH + T +L
Sbjct: 285 GHGHWVNTMAL 295
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 169 (64.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 63/222 (28%), Positives = 105/222 (47%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNK 88
D +K + H+ + + Q HG V+++A S D L +G+F+ + A + A D +G L K
Sbjct: 268 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDLQGSL-K 325
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------SQIM- 134
E+ R S L P+ L + S D T+ +W K +Q++
Sbjct: 326 ELKERA--SSRYNLV-RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 382
Query: 135 ------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGD 187
+AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D
Sbjct: 383 SPDSRIVASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSD 437
Query: 188 KTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
T+++WD + QK + + E + W+P+G +A G K+
Sbjct: 438 STLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKD 479
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLAS 68
S Y L+ LV DD+ ++ D K H + ++ V +S D R +AS
Sbjct: 332 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 391
Query: 69 GSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
SFDKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD +
Sbjct: 392 ASFDKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVK 446
Query: 128 TQKSQIMLASGSFDKSVAIFALDKKGD 154
QK L G D+ ++A+D D
Sbjct: 447 AQKLTTDLP-GHADE---VYAVDWSPD 469
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + G + V S++WS DG++LASG
Sbjct: 125 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGC 177
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTVRIWDA 126
K+ I D GH+ + L W NP+ ++++S D +VR+WD
Sbjct: 178 --KNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT 235
Query: 127 RTQKSQIML 135
+ + +L
Sbjct: 236 TAGRCERIL 244
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 135 LASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 190
L SGS D ++ ++ A DKK L + GH ++Q+ + +PD ++++AS DK++
Sbjct: 346 LVSGSDDFTLFLWSPAEDKK-PLARMT---GHQALINQVLF---SPDSRIVASASFDKSI 398
Query: 191 RIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
++WD RT K + + +G I W+ + + G+ + + DV
Sbjct: 399 KLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 445
Score = 87 (35.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW--- 166
Query: 108 NPDLLSTASGDKT--VRIWDART 128
+PD ASG K + +WD T
Sbjct: 167 SPDGKKLASGCKNGQILLWDPST 189
Score = 77 (32.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
R +AS S D SV ++ D E + GHT SV L W LL +AS D+T+++
Sbjct: 219 RYVASSSKDGSVRVW--DTTAG-RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 273
Query: 124 WDA 126
W A
Sbjct: 274 WRA 276
Score = 69 (29.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTV 190
LASG K+ I D GH+ + L W NP+ ++++S D +V
Sbjct: 173 LASGC--KNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 230
Query: 191 RIWDARTQKSQIIATKGENINIT---WAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLT 247
R+WD + + I T G ++T W +G + + + L RTL
Sbjct: 231 RVWDTTAGRCERILT-GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLC---RTLQ 286
Query: 248 SRGHLMETRSL 258
GH + T +L
Sbjct: 287 GHGHWVNTMAL 297
>UNIPROTKB|Q5AZD9 [details] [associations]
symbol:AN6341.2 "Coronin" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0005826 "actomyosin contractile ring"
evidence=ISS] [GO:0005885 "Arp2/3 protein complex" evidence=ISS]
[GO:0030479 "actin cortical patch" evidence=ISS] [GO:0034316
"negative regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 EMBL:AACD01000107 GO:GO:0005826
GO:GO:0051666 GO:GO:0034316 GO:GO:0005885 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B RefSeq:XP_663945.1
ProteinModelPortal:Q5AZD9 STRING:Q5AZD9 GeneID:2871240
KEGG:ani:AN6341.2 Uniprot:Q5AZD9
Length = 595
Score = 170 (64.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 76 AIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
A+ L+++G L + + ++RGHT V W+ N DL+++ S D V +W
Sbjct: 44 AVIPLEERGKLPERIPLFRGHTAVVLDTDWNPFNDDLIASGSDDGRVFLW---------R 94
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+ G F S + A D + D+ GH V + ++ ++L+TASGD TV+IWD
Sbjct: 95 VPEG-FTLSPDVDADDIQ-DVAPVGKLSGHPKKVGHVLFNPAAENILATASGDYTVKIWD 152
Query: 195 ARTQKSQIIATKGENINI-TWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHL- 252
S++ G+ + +W+ NG+ + +++ + DV + P E +GH
Sbjct: 153 IEAGASKLTLNVGDIVQSQSWSANGSLLVTTSRDKKLRVWDVRQERPAHE----GQGHTG 208
Query: 253 -METRSLW 259
+RS+W
Sbjct: 209 AKNSRSVW 216
>ASPGD|ASPL0000000923 [details] [associations]
symbol:AN6341 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0030479 "actin
cortical patch" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0035838 "growing cell tip" evidence=IEA]
[GO:0005826 "actomyosin contractile ring" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000166356
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:LQDRRIA
ProteinModelPortal:C8V0Z9 EnsemblFungi:CADANIAT00006644
Uniprot:C8V0Z9
Length = 611
Score = 170 (64.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 76 AIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
A+ L+++G L + + ++RGHT V W+ N DL+++ S D V +W
Sbjct: 60 AVIPLEERGKLPERIPLFRGHTAVVLDTDWNPFNDDLIASGSDDGRVFLW---------R 110
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+ G F S + A D + D+ GH V + ++ ++L+TASGD TV+IWD
Sbjct: 111 VPEG-FTLSPDVDADDIQ-DVAPVGKLSGHPKKVGHVLFNPAAENILATASGDYTVKIWD 168
Query: 195 ARTQKSQIIATKGENINI-TWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHL- 252
S++ G+ + +W+ NG+ + +++ + DV + P E +GH
Sbjct: 169 IEAGASKLTLNVGDIVQSQSWSANGSLLVTTSRDKKLRVWDVRQERPAHE----GQGHTG 224
Query: 253 -METRSLW 259
+RS+W
Sbjct: 225 AKNSRSVW 232
>UNIPROTKB|E2R4Z2 [details] [associations]
symbol:E2R4Z2 "Coronin" species:9615 "Canis lupus
familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08954 OMA:EVEFARC EMBL:AAEX03004582 EMBL:AAEX03004580
EMBL:AAEX03004581 Ensembl:ENSCAFT00000030509 Uniprot:E2R4Z2
Length = 923
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 50 HGSKVHSVAWS-CDGRRLASGSFDKSVAIFALDKKG--DL--NKEVVYRGHTGSVDQLCW 104
+G+ V +AW D RLA G D + ++ + +G ++ E V GHT + L +
Sbjct: 541 NGAAVTDLAWDPFDPYRLAVGGEDARIRLWRVPPEGLQEVLTTPEAVLTGHTEKIYSLRF 600
Query: 105 HATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFAL 149
H DLL+++S D T+RIWD + + Q+ L G D+ IF+L
Sbjct: 601 HPLAADLLASSSYDLTIRIWDLQARAEQLRL-QGHRDQ---IFSL 641
Score = 119 (46.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 135 LASGSFDKSVAIFALDKKG--DL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
LA G D + ++ + +G ++ E V GHT + L +H DLL+++S D T+
Sbjct: 558 LAVGGEDARIRLWRVPPEGLQEVLTTPEAVLTGHTEKIYSLRFHPLAADLLASSSYDLTI 617
Query: 191 RIWD--ARTQKSQIIATKGENINITWAPNGNTIAVGNKE 227
RIWD AR ++ ++ + + ++ W+P+G +A K+
Sbjct: 618 RIWDLQARAEQLRLQGHRDQIFSLAWSPSGQHLATVCKD 656
Score = 102 (41.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 33/107 (30%), Positives = 45/107 (42%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
H + E AHG V + WS DG L + DK + IF K ++ H D
Sbjct: 158 HQALTELAAHGDLVQAAVWSRDGALLGTICKDKQLRIFDPRTKPGASQST--EAHKNGKD 215
Query: 101 -QLCWHATNPDLLSTASG---DKTVRIWDARTQKSQIMLASGSFDKS 143
+L W L+ST + V++WD R S LAS + D S
Sbjct: 216 GRLAWTGIQEHLVSTGFNQMREHEVKVWDTRHFSSA--LASLTLDTS 260
Score = 87 (35.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEV---VYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+LA+GS D++V ++ L G V V V+ L +H T +L++A+G V
Sbjct: 92 LLATGSADRTVKLWRLPASGQALPSVPGLVLGPEPVQVEVLHFHPTADGVLASAAG-MAV 150
Query: 191 RIWD-ARTQKSQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTS 248
++WD A+ Q +A G+ + W+ +G + K+ + D ++ P ++ +
Sbjct: 151 KVWDVAKHQALTELAAHGDLVQAAVWSRDGALLGTICKDKQLRIFDP-RTKPGASQSTEA 209
Query: 249 RGHLMETRSLW 259
+ + R W
Sbjct: 210 HKNGKDGRLAW 220
Score = 78 (32.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 75 VAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ I L+ +G+ ++V Y G H+ V L + + LL+T S D+TV++W
Sbjct: 55 LGIVPLESQGEDKRQVTYLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLW 105
Score = 75 (31.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 50 HGSKVHSVAWS-CDGRRLASGSFDKSVAIFALDKKGDLNKEV---VYRGHTGSVDQLCWH 105
H V + +S D LA+GS D++V ++ L G V V V+ L +H
Sbjct: 76 HSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPASGQALPSVPGLVLGPEPVQVEVLHFH 135
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALD 150
T +L++A+G V++WD ++ LA+ A+++ D
Sbjct: 136 PTADGVLASAAG-MAVKVWDVAKHQALTELAAHGDLVQAAVWSRD 179
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 167 (63.8 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 62/240 (25%), Positives = 108/240 (45%)
Query: 18 LLPSGSQFHLVCKIDDYVK--HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSV 75
L P+G Q D ++ +F H Y H V SV +S G LAS S D++V
Sbjct: 26 LSPNGKQL-ATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTV 84
Query: 76 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
++ DK+G ++ ++ HT V + + A L+TAS DK++++W Q+ L
Sbjct: 85 RLWIPDKRGKFSE---FKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSL 140
Query: 136 ---------ASGSFDKSVAIFALDKK-----GDLNKEVVYRGHTGSVDQLCWHATNPD-- 179
A S D + + + K NK+ V + SV + NP
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV-NNFSDSVGFANFVDFNPSGT 199
Query: 180 LLSTASGDKTVRIWDARTQKS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+++A D+TV++WD R K Q +N I++ P+GN + + + + +D+++
Sbjct: 200 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 259
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 56/214 (26%), Positives = 103/214 (48%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++ H + + S+ S +G++LA+ S+D + ++ + Y GH V + + +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYR---YVGHKDVVTSVQF-S 69
Query: 107 TNPDLLSTASGDKTVRIW--DARTQKSQI-----------------MLASGSFDKSVAIF 147
+ +LL++AS D+TVR+W D R + S+ LA+ S DKS+ ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT 205
++ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 130 SMYRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTNKQCVNN 181
Query: 206 KGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+++ + + P+G IA + V DV
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 163 (62.4 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 58/174 (33%), Positives = 83/174 (47%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCW-HAT 107
H +H GRRLA+ S DK++ IF ++ GD +K V +GH G V + W H
Sbjct: 12 HDDMIHDAGLDYYGRRLATCSSDKTIKIFEIE--GDTHKLVETLKGHEGPVWCVEWAHPK 69
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
+L+++S D V IW + Q S + SG++ K V F+L HT S
Sbjct: 70 FGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTK-VFDFSL--------------HTAS 114
Query: 168 VDQLCW--HATNPDLLSTASGDKTVRIWDARTQK--SQIIATKGENIN-ITWAP 216
V+ + W H T LL+ AS D V + + R QI G +N I+WAP
Sbjct: 115 VNMISWAPHETGC-LLACASSDGHVSVLEFRDNSWTHQIFHAHGMGVNSISWAP 167
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 46/198 (23%), Positives = 88/198 (44%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ H + V+ ++W+ G LA S D V++ L+ + + ++ H V+ +
Sbjct: 107 DFSLHTASVNMISWAPHETGCLLACASSDGHVSV--LEFRDNSWTHQIFHAHGMGVNSIS 164
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL-NKEVV 160
W A +P L+S+ G I R +G D + I+ + + N
Sbjct: 165 WAPAASPGSLVSSNPG-----IGQQRR------FVTGGSDNLLKIWDYNPETKTYNATQT 213
Query: 161 YRGHTGSVDQLCWHAT--NPDLLSTASGDKTVRIWDARTQK-----SQIIATKGENINIT 213
GH+ V + W + + +++AS DKTVR+W A SQ++ ++
Sbjct: 214 LEGHSDWVRDVAWSPSILSKSYIASASQDKTVRVWTADASNPGQWTSQVLEFDNVLWRVS 273
Query: 214 WAPNGNTIAVGNKEDLVT 231
W+P+GN +AV ++ V+
Sbjct: 274 WSPSGNILAVSGGDNKVS 291
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 165 (63.1 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 61/234 (26%), Positives = 108/234 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P+ L+ +GS K+ D + ++ H +++ S++++ G R+ +GSFD
Sbjct: 186 NPQSTLVATGSM-DTTAKLWD----IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
+V ++ D G K GH + ++ + L+ T S DKT ++WDA K
Sbjct: 241 HTVTVWEADT-G--RKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKCV 296
Query: 133 IMLAS-------GSFD---KSVAIFALDKKGDL----NKEVVYR--GHTGSVDQLCWHAT 176
L FD K +A + D + +E V + GH G + ++ ++
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ 356
Query: 177 NPDLLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKED 228
LL T S DKT RIWDA+T Q Q++ + I + + G+ I G+K++
Sbjct: 357 GNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDN 409
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 47/168 (27%), Positives = 78/168 (46%)
Query: 96 TGSVDQLC--WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKG 153
TGS D+ C W + + L T G + V A +A+GSFDK+ +++++ G
Sbjct: 109 TGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET-G 167
Query: 154 DLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT--KGEN 209
+RGHT + +C + NP L++T S D T ++WD ++ + T E
Sbjct: 168 KCYH--TFRGHTAEI--VCL-SFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEI 222
Query: 210 INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRS 257
I++++ +GN I G+ + VT V + T GH E S
Sbjct: 223 ISLSFNTSGNRIITGSFDHTVT----VWEADTGRKVYTLIGHCAEISS 266
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 58/191 (30%), Positives = 96/191 (50%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V V S ASGS D++ +++ D+
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTY 417
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + L+T S DKTVR+W A+ Q + + L +G
Sbjct: 418 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVL 472
Query: 139 --SFD---KSVAIFALDKK--------GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
+F K +A D++ G L KE+ RGHT ++ L + + + L+++AS
Sbjct: 473 SLAFSPNGKYLASAGEDQRLKLWDLASGTLFKEL--RGHTDNITSLTF-SPDSSLIASAS 529
Query: 186 GDKTVRIWDAR 196
D +VR+WD R
Sbjct: 530 MDNSVRVWDIR 540
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 56/200 (28%), Positives = 93/200 (46%)
Query: 81 DKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM----- 134
D+ D+ E+ V RGH G V + A + LLS S D ++R WD + + ++
Sbjct: 326 DEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLS-CSEDMSIRYWDLGSFTNTVLYQGHA 384
Query: 135 --------------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180
ASGS D++ +++ D+ L +Y GH VD + +H N +
Sbjct: 385 YPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNY 440
Query: 181 LSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238
L+T S DKTVR+W A+ S + T +G +++ ++PNG +A ++ + D+
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 239 LPPRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 501 TLFKEL----RGHTDNITSL 516
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 42 NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
N ++ + H V S+A+S +G+ LAS D+ + ++ L G L KE+ RGHT ++
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL-ASGTLFKEL--RGHTDNITS 515
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIF 147
L + + + L+++AS D +VR+WD R GS + V ++
Sbjct: 516 LTF-SPDSSLIASASMDNSVRVWDIRNTHCSAP-TDGSSSELVGVY 559
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 167 (63.8 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 56/189 (29%), Positives = 95/189 (50%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V + S ASGS D++ +++ D+
Sbjct: 376 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTY 435
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + L+T S DKTVR+W A+ Q + + L +G
Sbjct: 436 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVL 490
Query: 139 --SFD---KSVAIFALDKK---GDLNKEVVY---RGHTGSVDQLCWHATNPDLLSTASGD 187
+F K +A D++ DL +Y RGHT ++ L + + + L+++AS D
Sbjct: 491 SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF-SPDSSLIASASMD 549
Query: 188 KTVRIWDAR 196
+VR+WD R
Sbjct: 550 NSVRVWDIR 558
Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WD + ASGS D++ +++ D+ L +Y GH VD + +H N + L+
Sbjct: 405 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNYLA 460
Query: 183 TASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T S DKTVR+W A+ S + T +G +++ ++PNG +A ++ + D+
Sbjct: 461 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Query: 241 PRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 521 YKEL----RGHTDNITSL 534
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 38 FNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
+N + + Y + H + + WS D + + DKS+ ++ KG+L K + R
Sbjct: 89 WNVYGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD-SNKGELIKRI--RE 145
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
H+G V+ C P L+++ S D++ RI+D R+ K L + + F+ D
Sbjct: 146 HSGVVNSCCPARRGPPLVASGSDDRSARIFDTRS-KGSTHLFQHKYPVTSVCFS-----D 199
Query: 155 LNKEVVYRGHTGSVDQLC--WHATNPD--LLSTASGDKTVRIWDARTQKSQIIATKGENI 210
+ +++ TG +D + W N + L + AS T+ + +++ +N
Sbjct: 200 ASDQLI----TGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNS 255
Query: 211 NITW 214
W
Sbjct: 256 CKIW 259
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 30/103 (29%), Positives = 56/103 (54%)
Query: 29 CKIDDYVKHFNTHNDIKEY---QAHGSK-VHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
CKI D + + +IK + Q + K + +WS DGRR+ GS D+ V I+ + K
Sbjct: 256 CKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTK- 314
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
+ GH+G+V+++ +H P ++++ S DKT+ + + +
Sbjct: 315 --QLQYCLPGHSGTVNEVTFHPNEP-IIASCSSDKTIYLGEIK 354
Score = 110 (43.8 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I + H +++S ++ G LASG DK IF + G+ V +GH G++ +L
Sbjct: 55 IMQLIGHKGEIYSCKFNSYGTALASGGSDKE--IFLWNVYGECINYSVLKGHKGTILELH 112
Query: 104 WHATNPDLLSTASGDKTVRIWDA 126
W +T+ + + TA DK++ +WD+
Sbjct: 113 W-STDSNEIYTACTDKSIGVWDS 134
Score = 98 (39.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 29/119 (24%), Positives = 59/119 (49%)
Query: 141 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 200
DKS+ ++ KG+L K + R H+G V+ C P L+++ S D++ RI+D R++ S
Sbjct: 126 DKSIGVWD-SNKGELIKRI--REHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGS 182
Query: 201 -QIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
+ K ++ ++ + + G ++++ D+ P TL S + + S+
Sbjct: 183 THLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLY-TLASHQDTITSTSV 240
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 162 (62.1 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 52/209 (24%), Positives = 101/209 (48%)
Query: 38 FNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 97
+ + +K + H + + V +S DG LAS S DK++ +++ +++ Y GH+
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR---YEGHSS 86
Query: 98 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--------------------MLAS 137
+ L W +++ +AS D T+RIWDAR+ + ++ S
Sbjct: 87 GISDLAW-SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVS 145
Query: 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR- 196
GSFD+++ I+ + K G + + + H+ + + ++ L+ +AS D + +IWDA+
Sbjct: 146 GSFDETIRIWEV-KTGKCVRMI--KAHSMPISSVHFNRDG-SLIVSASHDGSCKIWDAKE 201
Query: 197 -TQKSQIIATKGENINIT-WAPNGNTIAV 223
T +I K ++ ++PNG I V
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILV 230
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 166 (63.5 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 56/189 (29%), Positives = 95/189 (50%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V + S ASGS D++ +++ D+
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTY 417
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + L+T S DKTVR+W A+ Q + + L +G
Sbjct: 418 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQ-QGNSVRLFTGHRGPVL 472
Query: 139 --SFD---KSVAIFALDKK---GDLNKEVVY---RGHTGSVDQLCWHATNPDLLSTASGD 187
+F K +A D++ DL +Y RGHT ++ L + + + L+++AS D
Sbjct: 473 SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF-SPDSGLIASASMD 531
Query: 188 KTVRIWDAR 196
+VR+WD R
Sbjct: 532 NSVRVWDIR 540
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WD + ASGS D++ +++ D+ L +Y GH VD + +H N + L+
Sbjct: 387 VWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNYLA 442
Query: 183 TASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T S DKTVR+W A+ S + T +G +++ ++PNG +A ++ + D+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 241 PRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 503 YKEL----RGHTDNITSL 516
>UNIPROTKB|P57737 [details] [associations]
symbol:CORO7 "Coronin-7" species:9606 "Homo sapiens"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISS;IBA]
[GO:0015629 "actin cytoskeleton" evidence=IRD] [GO:0030036 "actin
cytoskeleton organization" evidence=IRD] [GO:0051015 "actin
filament binding" evidence=IRD] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016021 GO:GO:0005829 GO:GO:0005794
GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016023
EMBL:CH471112 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 CTD:79585 HOGENOM:HOG000006535
HOVERGEN:HBG051080 OrthoDB:EOG49S65R EMBL:AK025674 EMBL:AK296807
EMBL:AC012676 EMBL:BC032732 EMBL:BC117289 EMBL:BC117291
IPI:IPI00027996 IPI:IPI00940326 RefSeq:NP_001188402.1
RefSeq:NP_001188408.1 RefSeq:NP_078811.3 UniGene:Hs.437957
UniGene:Hs.739021 ProteinModelPortal:P57737 SMR:P57737
STRING:P57737 PhosphoSite:P57737 DMDM:259016200 PaxDb:P57737
PRIDE:P57737 DNASU:79585 Ensembl:ENST00000251166
Ensembl:ENST00000537233 Ensembl:ENST00000572467 GeneID:79585
KEGG:hsa:79585 UCSC:uc002cwf.3 UCSC:uc010uxi.2
GeneCards:GC16M004405 GeneCards:GC16M004406 H-InvDB:HIX0012777
HGNC:HGNC:26161 HPA:HPA041657 MIM:611668 neXtProt:NX_P57737
PharmGKB:PA134910806 InParanoid:P57737 OMA:EVEFARC PhylomeDB:P57737
GenomeRNAi:79585 NextBio:68583 ArrayExpress:P57737 Bgee:P57737
CleanEx:HS_CORO7 Genevestigator:P57737 GermOnline:ENSG00000103426
Uniprot:P57737
Length = 925
Score = 115 (45.5 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 44/144 (30%), Positives = 64/144 (44%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
V+QFH P S + +G+ K+ D K + E AHG V S WS DG
Sbjct: 131 VLQFH-PTSDGILVSAAGT----TVKVWDAAKQ----QPLTELAAHGDLVQSAVWSRDGA 181
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASG---DKT 120
+ + DK + IF K ++ + H S D +L W T L+ST ++
Sbjct: 182 LVGTACKDKQLRIFDPRTKPRASQST--QAHENSRDSRLAWMGTWEHLVSTGFNQMRERE 239
Query: 121 VRIWDARTQKSQIMLASGSFDKSV 144
V++WD R S LAS + D S+
Sbjct: 240 VKLWDTRFFSSA--LASLTLDTSL 261
Score = 102 (41.0 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIIATKGENINITWA 215
E V GHT + L +H ++L+++S D TVRIWD A + ++ + + ++ W+
Sbjct: 587 ETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWS 646
Query: 216 PNGNTIAVGNKEDLV 230
P+G +A K+ V
Sbjct: 647 PDGQQLATVCKDGRV 661
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 50 HGSKVHSVAWS-CDGRRLASGSFDKSVAIFALDKKGDLNKE---VVYRGHTGSVDQLCWH 105
H V + +S D LA+GS D++V ++ L G VV V+ L +H
Sbjct: 76 HSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFH 135
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLAS-GSFDKSVAIFALD 150
T+ +L +A+G TV++WDA Q+ LA+ G +S A+++ D
Sbjct: 136 PTSDGILVSAAGT-TVKVWDAAKQQPLTELAAHGDLVQS-AVWSRD 179
Score = 72 (30.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVR 191
+LAS S+D +V I+ L D K +GH + L W +PD L+T D VR
Sbjct: 609 VLASSSYDLTVRIWDLQAGADRLK---LQGHQDQIFSLAW---SPDGQQLATVCKDGRVR 662
Query: 192 IWDARTQKSQII---ATKG-ENINITWAPNGNTIAV 223
++ R+ + KG I W +G + V
Sbjct: 663 VYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLV 698
Score = 69 (29.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 42 NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSV-AIFALDKKGDLNKEVVYRG-HTGSV 99
+DI+ A + H + SC +A S V I L +G+ + V + G H+ V
Sbjct: 24 SDIRAGTAPSCRNH-IKSSCS--LIAFNSDRPGVLGIVPLQGQGEDKRRVAHLGCHSDLV 80
Query: 100 DQLCWHATNPDLLSTASGDKTVRIW 124
L + + LL+T S D+TV++W
Sbjct: 81 TDLDFSPFDDFLLATGSADRTVKLW 105
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ +A++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 263 AHSAEVNCLAFNPYSEFILATGSADKTVALW--DLRNLRLKLHSFESHRDEIFQVQWSPH 320
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ DK + +WD S+I G D++ A A D +L ++ GHT
Sbjct: 321 NETILASSGTDKRLHVWDL----SKI----GE-DQT-AEDAEDGPPELL--FIHGGHTAK 368
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D +++W
Sbjct: 369 ISDFSWNPNEPWVVCSVSEDNILQVW 394
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 31 IDDYVKH-----FNTHNDIKEYQAHGSKVHSVAWSCDGRRLA-SGSFDKSVAIFALD--- 81
I DY K+ NT N + + + H + + ++W+ + L S S D++V + ++
Sbjct: 147 IFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNA 206
Query: 82 -KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
G+L +++GH V+ + WH + + + DK + IWD RT
Sbjct: 207 GANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRT 254
Score = 90 (36.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG---ENINITWAPNGNT 220
H+ V+ L ++ + +L+T S DKTV +WD R + ++ + + E + W+P+ T
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNET 323
Query: 221 IAVGNKED 228
I + D
Sbjct: 324 ILASSGTD 331
>MGI|MGI:1314881 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1 complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:1314881 GO:GO:0005829
GO:GO:0005813 GO:GO:0005654 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 GeneTree:ENSGT00550000074968
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT CTD:8208
OrthoDB:EOG4G4GQD PRINTS:PR00319 HOVERGEN:HBG050780 EMBL:AK011243
EMBL:BC013532 IPI:IPI00132770 RefSeq:NP_082359.1 UniGene:Mm.274222
ProteinModelPortal:Q9D0N7 SMR:Q9D0N7 STRING:Q9D0N7
PhosphoSite:Q9D0N7 PRIDE:Q9D0N7 Ensembl:ENSMUST00000023666
Ensembl:ENSMUST00000117099 GeneID:110749 KEGG:mmu:110749
UCSC:uc008aac.1 InParanoid:Q9D0N7 NextBio:364585 Bgee:Q9D0N7
CleanEx:MM_CHAF1B Genevestigator:Q9D0N7
GermOnline:ENSMUSG00000022945 Uniprot:Q9D0N7
Length = 572
Score = 156 (60.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 55/180 (30%), Positives = 84/180 (46%)
Query: 55 HSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-----YRGHTGSVDQLCWHATNP 109
H W RLAS D +V I+ L++ D K +V HT +V+ + + T
Sbjct: 23 HGATWKI--HRLASAGVDTAVRIWKLERGPD-GKAIVEFLSNLARHTKAVNVVRFSPTG- 78
Query: 110 DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKE---VV--YRGH 164
++L++ D + +W K +A F +++ LNKE VV RGH
Sbjct: 79 EILASGGDDAVILLWKMNDSKEPEQIA----------FQDEEEAQLNKENWTVVKTLRGH 128
Query: 165 TGSVDQLCWHATNPDLLSTASGDKTVRIWD-ARTQKSQIIATKGENIN-ITWAPNGNTIA 222
V +CW AT+ +L+++AS D TV IWD ++ QK I + +TW P G IA
Sbjct: 129 LEDVYDICW-ATDGNLMTSASVDNTVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIA 187
Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKS---LPPRERTLTS 248
+I+W+ +G +A+ + + TF+ K +P +E+ + S
Sbjct: 358 DISWSSDGAFLAISSTDGYCTFVTFEKGELGIPLKEKPVLS 398
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 226 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 282
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 283 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 332
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 333 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 367
Score = 108 (43.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 118 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 177
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 178 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 227
Score = 99 (39.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 296
Query: 221 IAVGNKED 228
I + D
Sbjct: 297 ILASSGTD 304
Score = 89 (36.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 250 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 306
Query: 190 VRIWD 194
+ +WD
Sbjct: 307 LNVWD 311
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 121 (47.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 33/78 (42%), Positives = 42/78 (53%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE--VVYRGHTGSVDQLCWHAT 107
H V VAWS G+ LAS SFD + I+ KK D + E V GH V + W A
Sbjct: 60 HQRTVRKVAWSPCGKYLASASFDATTCIW---KKTDEDFECLTVLEGHENEVKCVAW-AP 115
Query: 108 NPDLLSTASGDKTVRIWD 125
+ LL+T S DK+V IW+
Sbjct: 116 SGSLLATCSRDKSVWIWE 133
Score = 120 (47.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V VAW+ G LA+ S DKSV I+ +D++ + V HT V + WH T
Sbjct: 102 EGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPT 161
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKG 153
+LL++AS D + I+ + + +V D +G
Sbjct: 162 Q-ELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEG 206
Score = 81 (33.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-NPD--LLSTASGD 187
+Q +LAS S+D + I+ ++ D GH +V W T +P+ L++ S D
Sbjct: 161 TQELLASASYDNKICIYK-EEDDDWECRATLEGHESTV----WSLTFDPEGRRLASCSDD 215
Query: 188 KTVRIWDART 197
+TV+IW T
Sbjct: 216 RTVKIWKEST 225
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 62/222 (27%), Positives = 105/222 (47%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNK 88
D +K + H+ + + Q HG V+++A S D L +G+F+ + A + A D +G L +
Sbjct: 267 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLRGSL-Q 324
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------SQIM- 134
E+ R S L P+ L + S D T+ +W K +Q++
Sbjct: 325 ELKERAL--SRYNLV-RGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVF 381
Query: 135 ------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGD 187
+AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D
Sbjct: 382 SPDSRVIASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSD 436
Query: 188 KTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
T+++WD + QK + + E + W+P+G +A G K+
Sbjct: 437 STLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKD 478
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 16 YKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLASGSF 71
Y L+ LV DD+ ++ D K H + ++ V +S D R +AS SF
Sbjct: 334 YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASF 393
Query: 72 DKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD + QK
Sbjct: 394 DKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQK 448
Query: 131 SQIMLASGSFDKSVAIFALDKKGD 154
L G D+ ++A+D D
Sbjct: 449 LSTDLP-GHADE---VYAVDWSPD 468
Score = 107 (42.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY--QAHGSKVHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + Q H V S++WS DG++LASG
Sbjct: 124 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGC 176
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNPDL--LSTASGDKTVRIWD 125
+ + ++ + + + GH+ + L W HA NP+ ++++S D +VR+WD
Sbjct: 177 KNGQILLWDPSTGKQVGRALT--GHSKWITALSWEPLHA-NPECRYVASSSKDGSVRVWD 233
Score = 89 (36.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 112 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSISW--- 165
Query: 108 NPDLLSTASGDKT--VRIWDARTQK 130
+PD ASG K + +WD T K
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGK 190
Score = 87 (35.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 135 LASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 190
L SGS D ++ ++ A DKK L + GH ++Q+ + +PD ++++AS DK++
Sbjct: 345 LVSGSDDFTLFLWSPAEDKK-PLARMT---GHQALINQVVF---SPDSRVIASASFDKSI 397
Query: 191 RIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
++WD RT K + + +G I W+ + + G+ + + DV
Sbjct: 398 KLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 444
Score = 70 (29.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 32/120 (26%), Positives = 54/120 (45%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDI-KEYQAHGSKVHSVAW-----SCDGRRL 66
SP+ K L SG + + D +T + + H + +++W + + R +
Sbjct: 166 SPDGKKLASGCKNGQILLWDP-----STGKQVGRALTGHSKWITALSWEPLHANPECRYV 220
Query: 67 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126
AS S D SV ++ G + + GH SV L W LL +AS D+T+++W A
Sbjct: 221 ASSSKDGSVRVWDTTA-GRCERTLT--GHAQSVTCLRWGGDG--LLYSASQDRTIKVWRA 275
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 150 (57.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 40/148 (27%), Positives = 70/148 (47%)
Query: 80 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD----ARTQKSQIML 135
+DK L + GHT V + W+ ++++ S DKTVRIW+ R+ ++
Sbjct: 4 MDKNLGLEEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGH 63
Query: 136 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 195
GSFD + ++ + D V RGH V + W+A+ LL+T DK+V IW+
Sbjct: 64 RLGSFDGNTCVWE-NFATDSESVSVLRGHESEVKSVSWNASG-SLLATCGRDKSVWIWEI 121
Query: 196 RTQKSQ------IIATKGENIN-ITWAP 216
+ ++ ++ E++ + W P
Sbjct: 122 QPEEDDEFDTIAVLTGHSEDVKMVLWHP 149
Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 43 DIKEYQAHGSKVHSVAWS--CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR-GHT-GS 98
++++ + H +V +VAW+ DG +AS S DK+V I+ ++ L + + GH GS
Sbjct: 12 EVQKLEGHTDRVWNVAWNPAADGV-IASCSADKTVRIW---EQSSLTRSWTCKLGHRLGS 67
Query: 99 VD-QLC-WH--ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
D C W AT+ + +S G ++ + S +LA+ DKSV I+ + + D
Sbjct: 68 FDGNTCVWENFATDSESVSVLRGHES-EVKSVSWNASGSLLATCGRDKSVWIWEIQPEED 126
Query: 155 --LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+ V GH+ V + WH T D+L + S D T++IW
Sbjct: 127 DEFDTIAVLTGHSEDVKMVLWHPTM-DVLFSCSYDNTIKIW 166
Score = 130 (50.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 36 KHFNTHND-IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD--LNKEVVY 92
++F T ++ + + H S+V SV+W+ G LA+ DKSV I+ + + D + V
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
GH+ V + WH T D+L + S D T++IW
Sbjct: 136 TGHSEDVKMVLWHPTM-DVLFSCSYDNTIKIW 166
Score = 70 (29.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 134 MLASGSFDKSVAIFAL-DKKGDLN----KEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 188
+L S S+D ++ I+ D+ GD N + GH+ +V + ++A D + T S D
Sbjct: 153 VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAG-DKMVTCSDDL 211
Query: 189 TVRIWDARTQKSQ 201
V+IW + Q
Sbjct: 212 AVKIWKTDISRMQ 224
Score = 38 (18.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 130 KSQIMLASGSFDKSVAIFAL 149
K +LAS S DK V I+ L
Sbjct: 305 KESRLLASASDDKMVKIWKL 324
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/219 (26%), Positives = 100/219 (45%)
Query: 37 HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 96
+F H Y H V SV +S G LAS S D++V ++ DK+G ++ ++ HT
Sbjct: 4 NFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE---FKAHT 60
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML---------ASGSFDKSVAIF 147
V + + A L+TAS DK++++W Q+ L A S D + +
Sbjct: 61 APVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 119
Query: 148 ALDKK-----GDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKS 200
+ K NK+ V + SV + NP +++A D+TV++WD R K
Sbjct: 120 CSEDKTIKIWDTTNKQCV-NNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKL 178
Query: 201 -QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N I++ P+GN + + + + +D+++
Sbjct: 179 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 217
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/110 (23%), Positives = 55/110 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIF---ALDK 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ A+ K
Sbjct: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 161 (61.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 61/240 (25%), Positives = 107/240 (44%)
Query: 18 LLPSGSQFHLVCKIDDYVK--HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSV 75
L P+G Q D ++ +F H Y H V SV +S G LAS S D++V
Sbjct: 26 LSPNGKQL-ATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTV 84
Query: 76 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
++ DK+G ++ ++ HT V + + A L+TAS DK++++W Q+ L
Sbjct: 85 RLWIPDKRGKFSE---FKAHTAPVRSVDFSADG-QFLATASEDKSIKVWSMYRQRFLYSL 140
Query: 136 ---------ASGSFDKSVAIFALDKK-----GDLNKEVVYRGHTGSVDQLCWHATNPD-- 179
A S D + + + K NK+ V + SV + NP
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV-NNFSDSVGFANFVDFNPSGT 199
Query: 180 LLSTASGDKTVRIWDARTQKS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+++A D+TV++WD R K Q +N I++ P+ N + + + + +D+++
Sbjct: 200 CIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLE 259
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 56/214 (26%), Positives = 103/214 (48%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++ H + + S+ S +G++LA+ S+D + ++ + Y GH V + + +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYR---YVGHKDVVTSVQF-S 69
Query: 107 TNPDLLSTASGDKTVRIW--DARTQKSQI-----------------MLASGSFDKSVAIF 147
+ +LL++AS D+TVR+W D R + S+ LA+ S DKS+ ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT 205
++ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 130 SMYRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTNKQCVNN 181
Query: 206 KGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+++ + + P+G IA + V DV
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 215
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 135 LASGSFDKSVAIF---ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
L SGS D+ + ++ A + LN VY GH ++ + WH N +L +A D +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 243
Query: 192 IWDARTQKSQI-IATKGENIN-ITWAP-NGNTIAVGNKEDLVTFIDVVKSLPPRERTLTS 248
IWD RT + Q + +N +++ P N +A + + V D+ K P +
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSH 303
Query: 249 RGHLME 254
G + +
Sbjct: 304 EGEVFQ 309
Score = 117 (46.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 50 HGSKVHSVAWSC--DGRRLASGSFDKSVAIF---ALDKKGDLNKEVVYRGHTGSVDQLCW 104
H + + ++WS +G L SGS D+ + ++ A + LN VY GH ++ + W
Sbjct: 167 HDKEGYGLSWSPFKEGY-LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSW 225
Query: 105 HATNPDLLSTASGDKTVRIWDARTQKSQ 132
H N +L +A D + IWD RT + Q
Sbjct: 226 HMKNENLFGSAGEDGRLVIWDTRTNQMQ 253
Score = 87 (35.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
+LA+ S D +VA+F L K LN + V H G V Q+ W + +L+++ D+ + +
Sbjct: 275 VLATASSDSTVALFDLRK---LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMV 331
Query: 193 WDA-RTQKSQI 202
WD R + Q+
Sbjct: 332 WDLNRVGEEQL 342
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
H Y H V S+ +S G LAS S DK+V ++ LD+KG K ++ HT V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKG---KSSEFKAHTAPVR 106
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQI-------------------MLASGSFD 141
+ + A L TAS DK++++W Q+ ++ S S D
Sbjct: 107 SVDFSADG-QFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 165
Query: 142 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS- 200
K++ I+ K +N G VD + N +++A D VRIWD R +
Sbjct: 166 KTIKIWDTTSKQCVNNFSDSVGFANFVD----FSPNGTCIASAGSDHAVRIWDIRMNRLL 221
Query: 201 QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
Q +N +++ P+GN++ + + V +D+V+
Sbjct: 222 QHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVE 259
Score = 133 (51.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 56/214 (26%), Positives = 103/214 (48%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++ H + + S +S + +++A+ S+D + +++L + Y GH V L + +
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR---YVGHKDVVTSLQF-S 69
Query: 107 TNPDLLSTASGDKTVRIW--DARTQKSQIML-----------ASGSF------DKSVAIF 147
+LL++AS DKTVR+W D + + S+ A G F DKS+ ++
Sbjct: 70 PQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT 205
++ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 130 SMYRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTSKQCVNN 181
Query: 206 KGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+++ + ++PNG IA + V D+
Sbjct: 182 FSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDI 215
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 161 (61.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/219 (29%), Positives = 106/219 (48%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLN- 87
D +K + H+ + + Q HG V+++A S D L +G+F+ + A + A D +G L
Sbjct: 266 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLRGSLQE 324
Query: 88 -KEVV---Y---RGH------TGSVD--QLCWH-ATNPDLLSTASGDKTVRIWDARTQKS 131
KE Y RG +GS D W A + L+ +G + + + S
Sbjct: 325 LKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDS 384
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+I +AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D T+
Sbjct: 385 RI-IASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTL 438
Query: 191 RIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
++WD + QK + + E + W+P+G +A G K+
Sbjct: 439 KVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 16 YKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLASGSF 71
Y L+ LV DD+ ++ D K H + ++ V +S D R +AS SF
Sbjct: 333 YNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASF 392
Query: 72 DKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD + QK
Sbjct: 393 DKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQK 447
Query: 131 SQIMLASGSFDKSVAIFALDKKGD 154
L G D+ ++A+D D
Sbjct: 448 LAADLP-GHADE---VYAVDWSPD 467
Score = 109 (43.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 36/130 (27%), Positives = 64/130 (49%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY--QAHGSKVHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + Q H V S++WS DG++LASG
Sbjct: 123 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGC 175
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNPDL--LSTASGDKTVRIWD 125
+ + ++ + + + GH+ + L W HA NP+ ++++S D +VR+WD
Sbjct: 176 KNGQILLWDPSTGKQVGRALA--GHSKWITALSWEPLHA-NPECRYVASSSKDGSVRVWD 232
Query: 126 ARTQKSQIML 135
+ + +L
Sbjct: 233 TTAGRCERIL 242
Score = 88 (36.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 135 LASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 190
L SGS D ++ ++ A DKK L + GH ++Q+ + +PD ++++AS DK++
Sbjct: 344 LVSGSDDFTLFLWSPAEDKK-PLARMT---GHQALINQVLF---SPDSRIIASASFDKSI 396
Query: 191 RIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
++WD RT K + + +G I W+ + + G+ + + DV
Sbjct: 397 KLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 160 (61.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 62/224 (27%), Positives = 104/224 (46%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLN- 87
D +K + H+ + + Q HG V+++A S D L +G+F+ + A I A D +G L
Sbjct: 217 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASINAQDLQGSLQE 275
Query: 88 -KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------SQI 133
K+ R + Q P+ L + S D T+ +W K +Q+
Sbjct: 276 LKDRALRRYNLVRGQ------GPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQV 329
Query: 134 M-------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTAS 185
+ +AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S
Sbjct: 330 LFSPDSRIIASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGS 384
Query: 186 GDKTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
D T+++WD + QK + + E + W+P+G +A G K+
Sbjct: 385 SDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKD 428
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 16 YKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLASGSF 71
Y L+ LV DD+ ++ D K H + ++ V +S D R +AS SF
Sbjct: 284 YNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASF 343
Query: 72 DKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD + QK
Sbjct: 344 DKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQK 398
Query: 131 SQIMLASGSFDKSVAIFALDKKGD 154
L G D+ ++A+D D
Sbjct: 399 LAADLP-GHADE---VYAVDWSPD 418
Score = 110 (43.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEY--QAHGSKVHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + Q H V S++WS DG+ LASG
Sbjct: 74 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGC 126
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNPDL--LSTASGDKTVRIWD 125
K+ I D V GH+ + L W HA NP+ ++++S D +VR+WD
Sbjct: 127 --KNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHA-NPECRYMASSSKDGSVRVWD 183
Query: 126 ARTQKSQIML 135
+ + +L
Sbjct: 184 TTAGRCERIL 193
Score = 90 (36.7 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 32/125 (25%), Positives = 64/125 (51%)
Query: 118 DKTVRIWDARTQKSQIMLASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHA 175
D+ +R ++ + L SGS D ++ ++ A DKK L + GH ++Q+ +
Sbjct: 278 DRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKK-PLARMT---GHQALINQVLF-- 331
Query: 176 TNPD--LLSTASGDKTVRIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLV 230
+PD ++++AS DK++++WD RT K + + +G I W+ + + G+ + +
Sbjct: 332 -SPDSRIIASASFDKSIKLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTL 389
Query: 231 TFIDV 235
DV
Sbjct: 390 KVWDV 394
Score = 90 (36.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/85 (34%), Positives = 41/85 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCQGHRHWVLSISW--- 115
Query: 108 NPDLLSTASGDKT--VRIWDARTQK 130
+PD + ASG K + +WD T K
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGK 140
Score = 79 (32.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK-VHSVAW-----SCDGRRL 66
SP+ K L SG + + D +T + A SK + ++W + + R +
Sbjct: 116 SPDGKTLASGCKNGQILLWDP-----STGKQVGRVLAGHSKWITGLSWEPLHANPECRYM 170
Query: 67 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126
AS S D SV ++ D E + GHT SV L W LL +AS D+T+++W A
Sbjct: 171 ASSSKDGSVRVW--DTTAG-RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKVWRA 225
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 158 (60.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 59/184 (32%), Positives = 91/184 (49%)
Query: 32 DDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
D + +N + D + Y + H V + ++ DG L S S DK+V ++ + G+ K
Sbjct: 77 DRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWD-SETGERVK 135
Query: 89 EVVYRGHTGSVDQLCWHATN-PDLLSTASGDKTVRIWDAR------TQKSQIMLASGSF- 140
+ +GHT V+ C+ A P L T S D TV++WD R T ++ + S +F
Sbjct: 136 RL--KGHTSFVNS-CFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFN 192
Query: 141 DKSVAIFA--LD---KKGDLNK-EVVY--RGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
D S I + +D K DL + +++Y +GH SV L A LLS S D +VR+
Sbjct: 193 DTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSN-SMDNSVRV 251
Query: 193 WDAR 196
WD R
Sbjct: 252 WDIR 255
Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 53/214 (24%), Positives = 105/214 (49%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H +V+ + +G LAS +D+ + ++ + GD +GH+G+V +L ++ T+
Sbjct: 55 HEGEVYCCKFHPNGATLASSGYDRLILMWNV--YGDCENYATLKGHSGAVMELHYN-TDG 111
Query: 110 DLLSTASGDKTVRIWDART-QKSQIMLASGSFDKS---------VAIFALD----KKGDL 155
LL +AS DKTV +WD+ T ++ + + SF S +A D K D+
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 156 NKEV-VYR-GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINIT 213
K+ V+ +T V + ++ T+ ++S D +++WD R Q I + +G ++T
Sbjct: 172 RKKASVHTFQNTYQVLSVTFNDTSDQIISGGI-DNDIKVWDLR-QNKLIYSMQGHGDSVT 229
Query: 214 W---APNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
+ +G+ + + ++ V D+ + P+ER
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVWDI-RPFAPKER 262
>MGI|MGI:1926135 [details] [associations]
symbol:Coro7 "coronin 7" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1926135 GO:GO:0016021 GO:GO:0005829
GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016023 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 OrthoDB:EOG49S65R
OMA:EVEFARC EMBL:AK018739 EMBL:AK040408 EMBL:AK150051 EMBL:BC061006
IPI:IPI00135390 RefSeq:NP_084481.3 UniGene:Mm.325512
ProteinModelPortal:Q9D2V7 SMR:Q9D2V7 STRING:Q9D2V7
PhosphoSite:Q9D2V7 PaxDb:Q9D2V7 PRIDE:Q9D2V7
Ensembl:ENSMUST00000038552 GeneID:78885 KEGG:mmu:78885
UCSC:uc007xzy.1 InParanoid:Q9D2V7 ChiTaRS:CORO7 NextBio:349664
Bgee:Q9D2V7 CleanEx:MM_CORO7 Genevestigator:Q9D2V7
GermOnline:ENSMUSG00000039637 Uniprot:Q9D2V7
Length = 922
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART--QKSQIIATKGENINITWA 215
E V GHT + L +H D+L+++S D TVRIWD +T ++ ++ + + ++ W+
Sbjct: 584 ETVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERLKLQGHQDQIFSLAWS 643
Query: 216 PNGNTIAVGNKEDLVTFIDVVKS-LPPRE 243
P+G +A K+ V + S LP +E
Sbjct: 644 PDGKQLATVCKDGHVRVYEPRSSPLPLQE 672
Score = 98 (39.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 39/143 (27%), Positives = 58/143 (40%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
V+QFH P + +G K+ D K + E +AH V S WS DG
Sbjct: 131 VLQFH-PTVDGVLVSTAGK----TVKVWDVAKQ----QPLTELEAHKDLVQSAVWSRDGA 181
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASG---DKT 120
+ + DK + IF D + + H + D +L W L+ST ++
Sbjct: 182 IVGTACKDKQLRIF--DPRARTQASQSTQAHENNRDIRLAWTGIQEHLVSTGFNQMRERE 239
Query: 121 VRIWDARTQKSQIMLASGSFDKS 143
++WD R S LAS + D S
Sbjct: 240 AKLWDTRLFSSA--LASVTLDTS 260
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 50 HGSKVHSVAWS-CDGRRLASGSFDKSVAIFALDKKGDLNKEV--VYRGHTG-SVDQLCWH 105
H V + +S D LASGS D+++ ++ L G+ V V G V+ L +H
Sbjct: 76 HSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTGEALPSVPGVVLGPEELPVEVLQFH 135
Query: 106 ATNPDLLSTASGDKTVRIWDARTQK 130
T +L + +G KTV++WD Q+
Sbjct: 136 PTVDGVLVSTAG-KTVKVWDVAKQQ 159
Score = 62 (26.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 75 VAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ + +L+ + + V Y G H+ V L + + LL++ S D+T+++W
Sbjct: 55 LGVISLEGHEENKRHVTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLW 105
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 157 (60.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWS 60
VI HT + P+ + C DD +K + D + H S V S+++
Sbjct: 134 VIHSHTQDVKKVVWHPT-KEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFD 192
Query: 61 CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 120
G R+ S S DK+V I+ G+ VV HT W +LS D+T
Sbjct: 193 GSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTK------WKCVC--VLS-GYHDRT 243
Query: 121 VRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNK---EVVY---RGHTGSVDQLCWH 174
I+D K ++A+ S D + IF D D N+ ++V + H+ V+ +CWH
Sbjct: 244 --IYDVHWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWH 301
Query: 175 ATNPDLLSTASGDKTVRIW 193
+ ++L+T S D TV++W
Sbjct: 302 PKDENILATCSDDGTVKLW 320
Score = 123 (48.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 53/192 (27%), Positives = 85/192 (44%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
+H V V W LAS S+D ++ ++ D+ D + GH +V + + +
Sbjct: 137 SHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDED-DWSCCDTLEGHESTVWSISFDGSG 195
Query: 109 PDLLSTASGDKTVRIWDARTQKSQI-MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
D + + S DKTVRIW + +Q ++ SG K + L D +Y H
Sbjct: 196 -DRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHD---RTIYDVH--- 248
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW--DA---RTQKS-QIIATKGE----NIN-ITWAP 216
W + L++TASGD +RI+ D R Q S Q++AT+ + ++N I W P
Sbjct: 249 -----WSKVS-GLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHP 302
Query: 217 NGNTIAVGNKED 228
I +D
Sbjct: 303 KDENILATCSDD 314
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SV WS G LA+ DKSV I+ + + + V HT V ++ WH T
Sbjct: 91 EGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPT 150
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D T++++
Sbjct: 151 K-EILASCSYDDTIKLY 166
Score = 113 (44.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H + S+ WS G LAS SFD + I+ K G+ GH V + W +
Sbjct: 49 HQRTIRSLGWSPCGTFLASASFDATTCIWD-QKSGEFECNATLEGHENEVKSVDWSVSG- 106
Query: 110 DLLSTASGDKTVRIWDAR 127
LL+T DK+V IW+ +
Sbjct: 107 SLLATCGRDKSVWIWEVQ 124
Score = 112 (44.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD--LNKEVVYRGHTGSVDQLCWHAT 107
H +V SVAWS +G LAS DK++ I+ K+GD + K ++ GH ++ L W
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWG--KEGDKWICKTILEDGHQRTIRSLGWSPC 61
Query: 108 NPDLLSTASGDKTVRIWDART 128
L++AS D T IWD ++
Sbjct: 62 GT-FLASASFDATTCIWDQKS 81
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGD--LNKEVVYRGHTGSVDQLCWHATNPD 179
R+W + +LAS DK++ I+ K+GD + K ++ GH ++ L W
Sbjct: 7 RVWSVAWSPNGFVLASCGGDKTIRIWG--KEGDKWICKTILEDGHQRTIRSLGWSPCGT- 63
Query: 180 LLSTASGDKTVRIWDARTQKSQIIAT-KG-ENI--NITWAPNGNTIAVGNKEDLVTFIDV 235
L++AS D T IWD ++ + + AT +G EN ++ W+ +G+ +A ++ V +V
Sbjct: 64 FLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEV 123
Score = 85 (35.0 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ DKSV I+ + + + V HT V ++ WH T ++L++ S D T++++
Sbjct: 108 LLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTK-EILASCSYDDTIKLY 166
Query: 194 DARTQKSQIIATKGENINITWAPN--GNTIAVGNKEDLVTFIDVVKSLPP--RERTLTSR 249
T + + W+ + G+ + + D T + + KS PP +E + S
Sbjct: 167 KEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKT-VRIWKSYPPGNQEGVVVSG 225
Query: 250 GH 251
H
Sbjct: 226 KH 227
Score = 68 (29.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
GH V + W + N +L++ GDKT+RIW K
Sbjct: 3 GHEDRVWSVAW-SPNGFVLASCGGDKTIRIWGKEGDK 38
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 160 (61.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 63/238 (26%), Positives = 107/238 (44%)
Query: 20 PSGSQFHLVCKIDDYVKHFNTHNDIK--EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAI 77
PSG Q D ++ +N + Y H V SV +S G LAS S D++V +
Sbjct: 28 PSGKQL-ATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRL 86
Query: 78 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML-- 135
+ DK+G K ++ HT V + + A L+TAS DK++++W+ Q+ L
Sbjct: 87 WIPDKRG---KSSEFKAHTAPVRSVDFSADG-QFLATASEDKSIKVWNMYRQRFLYSLYR 142
Query: 136 -------ASGSFDKSVAIFALDKK-----GDLNKEVVYRGHTGSVDQLCWHATNPD--LL 181
A S D + + + K NK+ V + SV + NP+ +
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCV-NNFSDSVGFANFVDFNPNGTCI 201
Query: 182 STASGDKTVRIWDARTQKS-QIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
++A D TV+IWD R K Q +N +++ P+GN I + + + +D+++
Sbjct: 202 ASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLE 259
Score = 134 (52.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 57/214 (26%), Positives = 101/214 (47%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++ H + + SV +S G++LA+ S+D + ++ + + Y GH V + +
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQA---RAFRYVGHKDVVTSVQFSP 70
Query: 107 TNPDLLSTASGDKTVRIW--DARTQKSQI-----------------MLASGSFDKSVAIF 147
+LL++AS D+TVR+W D R + S+ LA+ S DKS+ ++
Sbjct: 71 LG-NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT 205
+ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 130 NMYRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTNKQCVNN 181
Query: 206 KGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+++ + + PNG IA + V D+
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDI 215
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 58/218 (26%), Positives = 103/218 (47%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D +++++ + + YQ H V + S AS S D++ +++ D+
Sbjct: 354 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTY 413
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + L+T S DKTVR+W + Q + + L +G
Sbjct: 414 PLR---IYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQ-QGNSVRLFTGHRGPVL 468
Query: 139 --SFD---KSVAIFALDKK---GDLNKEVVY---RGHTGSVDQLCWHATNPDLLSTASGD 187
+F K +A D++ DL +Y RGHT ++ L + + + L+++AS D
Sbjct: 469 SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF-SPDSSLVASASMD 527
Query: 188 KTVRIWDARTQKSQIIA--TKGENINITWAPNGNTIAV 223
+VR+WD R+ A + E + + N ++V
Sbjct: 528 NSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSV 565
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/200 (27%), Positives = 91/200 (45%)
Query: 81 DKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM----- 134
D+ +L E+ V RGH G V + A + LLS S D ++R WD + + ++
Sbjct: 322 DEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLS-CSEDMSIRYWDLGSFTNTVLYQGHA 380
Query: 135 --------------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL 180
AS S D++ +++ D+ L +Y GH VD + +H N +
Sbjct: 381 YPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLR---IYAGHLADVDCVKFHP-NSNY 436
Query: 181 LSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238
L+T S DKTVR+W + S + T +G +++ ++PNG +A ++ + D+
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 239 LPPRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 497 TLYKEL----RGHTDNITSL 512
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 133 (51.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
Q HG ++++ +S DG LAS +D+ IF + G+ V +GH G++ ++ ++A
Sbjct: 33 QGHGGEIYTSQFSSDGSFLASAGYDQQ--IFLWNVFGECENFAVLKGHKGAIMEVKFNAD 90
Query: 108 NPDLLSTASGDKTVRIWDART 128
+ L+S A DKTVR+WD T
Sbjct: 91 SSHLVS-AGTDKTVRVWDMET 110
Score = 63 (27.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTV 190
+ +GS D+ V ++ + K ++ VY+ GH GSV+ H T LLS S DKT+
Sbjct: 270 ITAGSADRFVYVW--NAK---SRACVYKLPGHLGSVNCTALHPTQQILLSAGS-DKTI 321
Score = 52 (23.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/103 (22%), Positives = 44/103 (42%)
Query: 138 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR- 196
G D + ++ + + D+ V GH ++ L + N + L + S D ++ WD R
Sbjct: 181 GGIDNQIKVWDM-LRNDVR--YVLSGHRDTITSLSV-SHNGNFLLSNSMDCSLMSWDIRP 236
Query: 197 -TQKSQIIAT-KGENINIT-------WAPNGNTIAVGNKEDLV 230
+++A +G + N W+P N I G+ + V
Sbjct: 237 FVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFV 279
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 104 (41.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN---INITWAPNGN 219
GHT V+ + ++ + +L+T S DKTV +WD R + ++ K N ++++P+
Sbjct: 262 GHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYE 321
Query: 220 TI-AVGNKEDLVTFIDVVKSLPPRERTLTS 248
T+ A +D V D+ K P + S
Sbjct: 322 TVLASSGSDDRVIVWDISKIQDPSSSSAAS 351
Score = 100 (40.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 25/114 (21%), Positives = 55/114 (48%)
Query: 31 IDDYVKHFNTHNDIK-----EYQAHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKK 83
I DY KH + D K + H + + ++WS +G L +G D + + ++
Sbjct: 146 IFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGD-DGMICHWDINAN 204
Query: 84 GDLNKEVV----YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI 133
++ ++V ++GH+ + + + +HA + + + D+ + +WD R K Q+
Sbjct: 205 QTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQL 258
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 158 (60.7 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 68/266 (25%), Positives = 124/266 (46%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIK--EYQAHGSKVHSVAWSCDGRRL 66
H+ + + P G+Q D V +N + + + +H + V+ VAWS G +
Sbjct: 17 HSGGITQLRFGPDGAQI-ATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLV 75
Query: 67 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD- 125
AS D++V I+ +G ++ E V H+ +V + + +T L+ TAS DK+ +IW
Sbjct: 76 ASAGHDRTVKIWEPKLRG-VSGEFV--AHSKAVRSVDFDSTG-HLMLTASDDKSAKIWRV 131
Query: 126 ARTQ-KSQI-----------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
AR Q S ++A+ S DKSV I+ +D G+ + + +
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS-GECVR--TFTEERAA 188
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIWDAR-TQKSQIIATKGENIN-ITWAPNGNTIAVGN 225
QL WH ++L+ A G ++I+D +Q Q+ +N + + P+G+ + G+
Sbjct: 189 PRQLAWHPWG-NMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGS 247
Query: 226 KEDLVTFIDVVKSLPPRERTLTSRGH 251
+ + +D+++ P TLT GH
Sbjct: 248 DDRTIRILDLLEGRPIY--TLT--GH 269
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/208 (23%), Positives = 96/208 (46%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ + H + + + DG ++A+ S D +V ++ L++ + + + H+ V+ + W
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAA---RCIRFASHSAPVNGVAW 68
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ--KSQIM-----LASGSFDKS--VAIFALDKKGDL 155
+ +L+++A D+TV+IW+ + + + + + S FD + + + A D K
Sbjct: 69 -SPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAK 127
Query: 156 NKEVVYRGHTGS-VDQLCW-----HATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN 209
V R S Q W + N L++TAS DK+VRI+D + + T+
Sbjct: 128 IWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERA 187
Query: 210 I--NITWAPNGNTIAVGNKEDLVTFIDV 235
+ W P GN +AV + + DV
Sbjct: 188 APRQLAWHPWGNMLAVALGCNRIKIFDV 215
>POMBASE|SPCC18B5.10c [details] [associations]
symbol:SPCC18B5.10c "TREX complex subunit Tex1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000346
"transcription export complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC18B5.10c Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329672 eggNOG:COG2319
KO:K12880 GO:GO:0006406 GO:GO:0000346 InterPro:IPR013979
Pfam:PF08662 OrthoDB:EOG43V34X HOGENOM:HOG000264781 OMA:LAYACDD
PIR:T41203 RefSeq:NP_587940.1 ProteinModelPortal:Q9USL1
STRING:Q9USL1 EnsemblFungi:SPCC18B5.10c.1 GeneID:2539362
KEGG:spo:SPCC18B5.10c NextBio:20800527 Uniprot:Q9USL1
Length = 309
Score = 155 (59.6 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 135 LASGSFDKSVAIFALDKKG-DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
LAS S SV ++ D+ E+ RG+ G V+QL W T+ D L K +R W
Sbjct: 39 LASSSSSGSVLVWNSDRLDFKFTTELGNRGY-GLVEQLVWDPTHSDRLMAVYAGKMIRFW 97
Query: 194 DARTQKSQI-IATKGENINITWAPNGNTIAVGNKEDLVTFID 234
D R+ K I + ENI TW+P+GN +++D+++FID
Sbjct: 98 DFRSAKPIAEIESNYENIYATWSPSGNYCCASSRDDMLSFID 139
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I G ++ A A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 104 (41.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 20/89 (22%), Positives = 47/89 (52%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D ++ ++ + K+G + + + ++ GHT V+ +
Sbjct: 174 RGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDV 233
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKS 131
WH + L + + D+ + IWD R+ +
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 99 (39.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 135 LASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
L S S D ++ ++ + K+G + + + ++ GHT V+ + WH + L + + D+ +
Sbjct: 193 LLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 191 RIWDAR---TQK-SQIIATKGENIN-ITWAPNGNTI-AVGNKEDLVTFIDV 235
IWD R T K S + +N +++ P I A G+ + V D+
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 89 (36.4 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
Score = 68 (29.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
D GD + ++ RGH L W+ L +AS D T+ +WD
Sbjct: 162 DPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWD 206
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML-------------ASGSF 140
GHT + C+H + L +T+SGD T+++WD + + L + G F
Sbjct: 400 GHTDWLSGCCFHPSGSKL-ATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 141 DKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
S ++ K D+N E +Y GHT SV+ + + + ++L TAS DKT+ +WDAR
Sbjct: 459 VASASLDMTSKIWDVNSERCRYTLY-GHTDSVNSIEFFPFS-NILLTASADKTLSVWDAR 516
Query: 197 TQK-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T K Q + ++N T+ P G+ IA + + D K +P
Sbjct: 517 TGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIP 562
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P+ L+ +GS K+ D + ++ H +++ S+ ++ G RL +GSFD
Sbjct: 186 NPQSTLVATGSM-DTTAKLWDV----ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFD 240
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVD--QLCWHATNPDLLSTASGDKTVRIWDART-- 128
+ ++ + G K V GH G + Q W + L++TAS DK+ ++WDA
Sbjct: 241 HTAILWDVPS-G--RKVHVLSGHRGEISCVQFNWDCS---LIATASLDKSCKVWDAEGGQ 294
Query: 129 -------QKSQIM----------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 171
+++ +A+ S D + +F+ D L + GH G + ++
Sbjct: 295 CLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQ---LEGHKGEISKV 351
Query: 172 CWHATNPDLLSTASGDKTVRIWDARTQKS-QIIATKGENI-NITWAPNGNTIAVGNKED 228
C++A +L TAS DKT R+W +T Q++ + I + + G+TI G+K++
Sbjct: 352 CFNAQGSRVL-TASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDN 409
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 61/233 (26%), Positives = 112/233 (48%)
Query: 21 SGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFA 79
+GS + CKI D H + H + V+++A++ G ++A+GSFDK+ +++
Sbjct: 109 TGS-YDRTCKIWDTASGEELHT----LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWS 163
Query: 80 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK--------- 130
+ G +RGHT + L ++ + L++T S D T ++WD + +
Sbjct: 164 AET-GKCF--YTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVESGEEVSTLAGHF 219
Query: 131 SQIM----------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD--QLCWHATNP 178
++I+ L +GSFD + ++ + G K V GH G + Q W +
Sbjct: 220 AEIISLCFNTTGDRLVTGSFDHTAILWDVPS-G--RKVHVLSGHRGEISCVQFNWDCS-- 274
Query: 179 DLLSTASGDKTVRIWDARTQKSQIIATK-GEN---INITWAPNGNTIAVGNKE 227
L++TAS DK+ ++WDA + Q +AT G N +++ + G IA + +
Sbjct: 275 -LIATASLDKSCKVWDA--EGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/186 (27%), Positives = 83/186 (44%)
Query: 27 LVCKIDDYV--KHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L+CK+ + V K + QAH + +VA++ G +GS+D++ I+
Sbjct: 66 LICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGE 125
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK---------SQIM- 134
+L+ GH V + ++ D ++T S DKT ++W A T K ++I+
Sbjct: 126 ELH---TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC 182
Query: 135 LASGSFDKSVAIFALDKKGDL-----NKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDK 188
LA VA ++D L +EV GH + LC++ T D L T S D
Sbjct: 183 LAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTG-DRLVTGSFDH 241
Query: 189 TVRIWD 194
T +WD
Sbjct: 242 TAILWD 247
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 261 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 318
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 319 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 366
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 367 ISDFSWNPNEPWVICSVSEDNIMQIW 392
Score = 104 (41.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 164 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 223
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 224 AWHLLHESLFGSVADDQKLMIWDTRS 249
Score = 98 (39.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 321
Query: 221 IAVGNKED 228
I + D
Sbjct: 322 ILASSGTD 329
Score = 90 (36.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 275 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 332
Query: 191 RIWD 194
+WD
Sbjct: 333 NVWD 336
Score = 75 (31.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 152 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 211
Query: 139 SFDKSVAI 146
F A+
Sbjct: 212 IFTGHSAV 219
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 261 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 318
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 319 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 366
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 367 ISDFSWNPNEPWVICSVSEDNIMQIW 392
Score = 104 (41.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 164 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 223
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 224 AWHLLHESLFGSVADDQKLMIWDTRS 249
Score = 98 (39.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 321
Query: 221 IAVGNKED 228
I + D
Sbjct: 322 ILASSGTD 329
Score = 90 (36.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 275 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 332
Query: 191 RIWD 194
+WD
Sbjct: 333 NVWD 336
Score = 75 (31.5 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 152 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 211
Query: 139 SFDKSVAI 146
F A+
Sbjct: 212 IFTGHSAV 219
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 57/205 (27%), Positives = 96/205 (46%)
Query: 14 PEY--KLLPSGSQFHLVCKIDDYVKHFNTHNDIKE--YQAHGSKVHSVAWSCDGRRLASG 69
P Y + LP S L C D +++++ + YQ H V + S AS
Sbjct: 341 PVYSTRFLPDSSAL-LSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASA 399
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ 129
S+D + +++ D+ L +Y GH VD + +H N + L+T S DKTVR+W A+
Sbjct: 400 SYDHTARLWSFDRTYPLR---IYAGHLAGVDCVKFHP-NSNYLATGSTDKTVRLWSAQQG 455
Query: 130 KSQIM----------LA---SGSFDKSVAIFALDKKGDLNKEVVYR---GHTGSVDQLCW 173
S + LA +G + S L K DL +Y+ GHT + + +
Sbjct: 456 NSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTF 515
Query: 174 HATNPDLLSTASGDKTVRIWDARTQ 198
+ + ++++AS D +VRIWD +++
Sbjct: 516 -SLDSSVIASASMDNSVRIWDIKSK 539
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WD + AS S+D + +++ D+ L +Y GH VD + +H N + L+
Sbjct: 384 VWDLDISPHSLFFASASYDHTARLWSFDRTYPLR---IYAGHLAGVDCVKFHP-NSNYLA 439
Query: 183 TASGDKTVRIWDARTQKSQIIATK--GENINITWAPNGNTIAVGNKEDLVTFIDV 235
T S DKTVR+W A+ S + T G + ++PNG + ++ L+ D+
Sbjct: 440 TGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDL 494
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHA 106
AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H + Q+ W
Sbjct: 269 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSP 325
Query: 107 TNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 326 HNETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTA 373
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 374 KISDFSWNPNEPWVICSVSEDNIMQIW 400
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 25/107 (23%), Positives = 54/107 (50%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALD---K 82
DY KH + + E + H + + ++W+ + + L S S D +V ++ + K
Sbjct: 151 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPK 210
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
+G + + + ++ GH+ V+ + WH + L + + D+ + IWD R+
Sbjct: 211 EGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 257
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 329
Query: 221 IAVGNKED 228
I + D
Sbjct: 330 ILASSGTD 337
Score = 89 (36.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 283 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSPHNETILASSGTDRR 339
Query: 190 VRIWD 194
+ +WD
Sbjct: 340 LNVWD 344
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 328 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 375
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 376 ISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 191 RIWD 194
+WD
Sbjct: 342 NVWD 345
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHA 106
AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSP 326
Query: 107 TNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 327 HNETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTA 374
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 104 (41.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---K 82
DY KH + + E + H + + ++W+ + L S S D +V ++ + K
Sbjct: 152 DYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPK 211
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
+G + + + V+ GH+ V+ + WH + L + + D+ + IWD R+
Sbjct: 212 EGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 89 (36.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 284 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 190 VRIWD 194
+ +WD
Sbjct: 341 LNVWD 345
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 154 (59.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 67/236 (28%), Positives = 114/236 (48%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H + + SV +S +G LAS + D + I+ A D G+ K+ +Y GH+ + + W + +
Sbjct: 38 HSAAISSVKFSPNGEWLASSAADALIIIWGAYD--GNC-KKTLY-GHSLEISDVAWSSDS 93
Query: 109 PDLLSTASGDKTVRIWDARTQK--------SQI-----------MLASGSFDKSVAIFAL 149
L+S AS DKT+++WD R+ K S ++ SGSFD+SV I+ +
Sbjct: 94 SRLVS-ASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQIIATKGE 208
K G K + H+ + + ++ N L+ + S D RIWDA + Q + +A +G
Sbjct: 153 -KTGKCLKTL--SAHSDPISAVNFNC-NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN 208
Query: 209 N-IN-ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL-TSRGHLMETRSLWGT 261
++ + ++PNG I ++ + D R R L T GH E L+ +
Sbjct: 209 PPVSFVKFSPNGKYILTATLDNTLKLWDY-----SRGRCLKTYTGHKNEKYCLFAS 259
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/146 (30%), Positives = 71/146 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
K H ++ VAWS D RL S S DK++ ++ + + G K + +GH+ V C
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDM-RSGKCLKTL--KGHSDFV--FCC 129
Query: 105 HATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
P +L+ + S D++V+IW+ +T K L++ S S F + G L +V
Sbjct: 130 DFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCN--GSL---IV--- 181
Query: 164 HTGSVDQLC--WHATNPDLLSTASGD 187
+GS D LC W A + L T + +
Sbjct: 182 -SGSYDGLCRIWDAASGQCLRTLADE 206
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 109 (43.4 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 31/109 (28%), Positives = 55/109 (50%)
Query: 42 NDIKEYQAHGSKVH-----SVAWSCDGRRLASGSFDKSVAIFAL----DKKGDLNKEVVY 92
N + + H K+H + A++ +G+ +A G D + +IF L D+ G++ +
Sbjct: 94 NALTSQKTHAIKLHCPWVMTCAFAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRIL 153
Query: 93 RGHTGSVDQLCWHATNPDL-LSTASGDKTVRIWDARTQKSQIMLASGSF 140
GH G V C + + + L T+SGD+T +WD T + +I + G F
Sbjct: 154 TGHKGYVSS-CQYVPDQETRLITSSGDQTCVLWDVTTGQ-RISIFGGEF 200
Score = 90 (36.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGE--NIN-ITWAPNGN 219
GHT V L +++N ++ + S D TVR+WD R + G +IN + + P+G
Sbjct: 203 GHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQ 262
Query: 220 TIAVGNKEDLVTFIDV 235
G+ + DV
Sbjct: 263 RFGTGSDDGTCRLFDV 278
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 155 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
LN + H G + L +++ L T S DK ++IW
Sbjct: 334 LNLGNLQNSHEGRISCLGL-SSDGSALCTGSWDKNLKIW 371
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 69/228 (30%), Positives = 104/228 (45%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
K + H + ++A+S D R+L +GS D +V ++ GDL K V GHTG+V +
Sbjct: 768 KILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTT-GDLEKTFV--GHTGTVLSV-- 822
Query: 105 HATNPDLLSTASGD-KTVRIWDARTQKSQIMLASGSFDKSVA----------------IF 147
A + D SG + V++WDA T LASG F SVA IF
Sbjct: 823 -AISSDGRQIVSGSIEAVKLWDAATGDLLKTLASG-FAGSVAFSPDSRQIAAGFKDGKIF 880
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL--LSTASGDKTVRIWDARTQKSQIIAT 205
D G L K + H G++ + A +PD+ L T S D T++ WD Q
Sbjct: 881 IWDAAGTLQKTL--ERHPGAIMSI---AFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVG 935
Query: 206 KGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHL 252
+++ + +P+G IA G+ + + D ++TLT GHL
Sbjct: 936 HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATG--DLQKTLT--GHL 979
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 27 LVCKIDDYVKHFN-THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGD 85
+ C D +K ++ T ++E H V ++ S DG+ +ASGS DK++ ++ GD
Sbjct: 912 VTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDA-ATGD 970
Query: 86 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVA 145
L K + GH +V+++ + N ++S +S + V+IWDA T K Q S D
Sbjct: 971 LQKTLT--GHLDTVEKVVFSLDNRQIVSCSS--EAVKIWDAATGKVQNSFES---DDVFT 1023
Query: 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 186
I A+ G K + GH +L W LL T +G
Sbjct: 1024 IVAVSPDG---KHIA-SGHCNGRIKL-WDMATGSLLKTMAG 1059
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 58/191 (30%), Positives = 95/191 (49%)
Query: 56 SVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL--LS 113
SVA+S D R++A+G F K IF D G L K + H G++ + A +PD+ L
Sbjct: 860 SVAFSPDSRQIAAG-F-KDGKIFIWDAAGTLQKTL--ERHPGAIMSI---AFSPDVKQLV 912
Query: 114 TASGDKTVRIWD------------ARTQKSQIM------LASGSFDKSVAIFALDKKGDL 155
T S D T++ WD ++ + ++ +ASGS DK++ ++ GDL
Sbjct: 913 TCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDA-ATGDL 971
Query: 156 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINITW- 214
K + GH +V+++ + N ++S +S + V+IWDA T K Q + I
Sbjct: 972 QKTLT--GHLDTVEKVVFSLDNRQIVSCSS--EAVKIWDAATGKVQNSFESDDVFTIVAV 1027
Query: 215 APNGNTIAVGN 225
+P+G IA G+
Sbjct: 1028 SPDGKHIASGH 1038
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 61/187 (32%), Positives = 92/187 (49%)
Query: 31 IDDYVKHFNTHN-DI-KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
+D V+ +NT D+ K + H V SVA S DGR++ SGS + +V ++ GDL K
Sbjct: 794 VDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDA-ATGDLLK 851
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDAR--TQKS------QIMLASG 138
+ G GSV A +PD A+G D + IWDA QK+ IM +
Sbjct: 852 TLA-SGFAGSV------AFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIAF 904
Query: 139 SFD-KSVAIFALD---KKGDLNKEVVYR--GHTGSVDQLCWHATNPD--LLSTASGDKTV 190
S D K + + D K+ D+ V GH+ V + +PD ++++ S DKT+
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTM---VLSPDGKVIASGSADKTI 961
Query: 191 RIWDART 197
++WDA T
Sbjct: 962 KLWDAAT 968
>UNIPROTKB|F1MFD6 [details] [associations]
symbol:CORO7 "Coronin" species:9913 "Bos taurus"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 IPI:IPI00685445
UniGene:Bt.24770 OMA:EVEFARC EMBL:DAAA02057333
Ensembl:ENSBTAT00000012121 Uniprot:F1MFD6
Length = 915
Score = 106 (42.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWA 215
E V GHT + L +H D+L+++S D TVRIWD + Q+ + + + W+
Sbjct: 578 EAVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLKVGAEQLRLQGHRDQIFGLAWS 637
Query: 216 PNGNTIAVGNKE 227
P+G +A K+
Sbjct: 638 PDGQQLATVCKD 649
Score = 103 (41.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 38/127 (29%), Positives = 53/127 (41%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
V+QFH P + L +G K+ D K + E HG V AWS DG
Sbjct: 131 VLQFH-PTADGVLLSAAGR----AVKVWDATKQ----QPLTELATHGDLVQGAAWSRDGA 181
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASG---DKT 120
L + DK + IF K + + H S D +L W T L+ST ++
Sbjct: 182 LLGTTCKDKQLRIFDPRAKPEAAQSTP--AHENSRDGRLVWTGTQEYLVSTGFNQMRERE 239
Query: 121 VRIWDAR 127
V++WD R
Sbjct: 240 VKLWDTR 246
Score = 78 (32.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 75 VAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI 133
+ I L+ +G+ ++V + G H+ V L + + LL+TAS D+TV++W R S
Sbjct: 55 LGIVPLESQGEDKRQVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLW--RLPLSGQ 112
Query: 134 MLASG 138
L SG
Sbjct: 113 ALPSG 117
>UNIPROTKB|Q0V8F1 [details] [associations]
symbol:CORO7 "Coronin-7" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IRD] [GO:0030036
"actin cytoskeleton organization" evidence=IRD] [GO:0015629 "actin
cytoskeleton" evidence=IRD] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005794
GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 GO:GO:0016023 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:BT026268 IPI:IPI00685445
RefSeq:NP_001069371.1 UniGene:Bt.24770 ProteinModelPortal:Q0V8F1
PRIDE:Q0V8F1 GeneID:527934 KEGG:bta:527934 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 InParanoid:Q0V8F1
OrthoDB:EOG49S65R NextBio:20874698 Uniprot:Q0V8F1
Length = 915
Score = 106 (42.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWA 215
E V GHT + L +H D+L+++S D TVRIWD + Q+ + + + W+
Sbjct: 578 EAVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLKVGAEQLRLQGHRDQIFGLAWS 637
Query: 216 PNGNTIAVGNKE 227
P+G +A K+
Sbjct: 638 PDGQQLATVCKD 649
Score = 103 (41.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 38/127 (29%), Positives = 53/127 (41%)
Query: 5 VIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
V+QFH P + L +G K+ D K + E HG V AWS DG
Sbjct: 131 VLQFH-PTADGVLLSAAGR----AVKVWDATKQ----QPLTELATHGDLVQGAAWSRDGA 181
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD-QLCWHATNPDLLSTASG---DKT 120
L + DK + IF K + + H S D +L W T L+ST ++
Sbjct: 182 LLGTTCKDKQLRIFDPRAKPEAAQSTP--AHENSRDGRLVWTGTQEYLVSTGFNQMRERE 239
Query: 121 VRIWDAR 127
V++WD R
Sbjct: 240 VKLWDTR 246
Score = 78 (32.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 75 VAIFALDKKGDLNKEVVYRG-HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI 133
+ I L+ +G+ ++V + G H+ V L + + LL+TAS D+TV++W R S
Sbjct: 55 LGIVPLESQGEDKRQVTHLGCHSDLVTDLDFSPFDDFLLATASADRTVKLW--RLPLSGQ 112
Query: 134 MLASG 138
L SG
Sbjct: 113 ALPSG 117
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 314 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 371
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 372 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 419
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 420 ISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 104 (41.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 217 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 276
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 277 AWHLLHESLFGSVADDQKLMIWDTRS 302
Score = 98 (39.6 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 374
Query: 221 IAVGNKED 228
I + D
Sbjct: 375 ILASSGTD 382
Score = 90 (36.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 328 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 385
Query: 191 RIWD 194
+WD
Sbjct: 386 NVWD 389
Score = 75 (31.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 205 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 264
Query: 139 SFDKSVAI 146
F A+
Sbjct: 265 IFTGHSAV 272
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
AH ++V+ ++++ LA+GS DK+VA++ D + K + H + Q+ W
Sbjct: 314 AHTAEVNCLSFNPYSEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPH 371
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 372 NETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTAK 419
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 420 ISDFSWNPNEPWVICSVSEDNIMQIW 445
Score = 104 (41.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + ++ GH+ V+ +
Sbjct: 217 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 276
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 277 AWHLLHESLFGSVADDQKLMIWDTRS 302
Score = 98 (39.6 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 374
Query: 221 IAVGNKED 228
I + D
Sbjct: 375 ILASSGTD 382
Score = 90 (36.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+ +
Sbjct: 328 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 385
Query: 191 RIWD 194
+WD
Sbjct: 386 NVWD 389
Score = 75 (31.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 205 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 264
Query: 139 SFDKSVAI 146
F A+
Sbjct: 265 IFTGHSAV 272
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 135 (52.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 44 IKEYQAHGSKVHSVAWS-CDGRRLA-SGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
++ Y+ H +V+SV WS G +L SGS+D++V ++ G N +RGH +
Sbjct: 99 LQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYS 155
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P ++ASGD+T+RIWD +T +I++
Sbjct: 156 TIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI 189
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH---ATNPDLLSTASGDKTVRI-WD 125
SFD + +F D N E V +G W AT P + + + W
Sbjct: 58 SFDWNDGLF--DVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW- 114
Query: 126 ARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
++T+ Q+++ SGS+D++V ++ G N +RGH + W P ++AS
Sbjct: 115 SQTRGEQLVV-SGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 186 GDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
GD+T+RIWD +T +I+ A + E ++ W N N + G
Sbjct: 171 GDQTLRIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTG 212
Score = 56 (24.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D +V + K L + V + HT L +P ++ S D+T++I+
Sbjct: 252 VLASCSYDFTVRFWNFSKPDPLLETVEH--HTEFTCGLDLSLQSPTQVADCSWDETIKIY 309
Query: 194 D 194
D
Sbjct: 310 D 310
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 235 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 266
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 118 (46.6 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 37/132 (28%), Positives = 60/132 (45%)
Query: 19 LPSGSQFHLVCKIDDYVKHFNTHNDIKEY-------QAHGSKVHSVAWSCDGRRLASGSF 71
LP F L+ Y++ + ++D ++ + H + SVAWS G LAS SF
Sbjct: 7 LPLSFPF-LIFNFGQYIRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNYLASCSF 65
Query: 72 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
D ++ I++ K GD GH V + W ++ L++ S DK+ IW+ +
Sbjct: 66 DATICIWS-KKDGDFECMATLEGHENEVKCVNWSSSGV-YLASCSRDKSAWIWEFIEEDE 123
Query: 132 QIMLASGSFDKS 143
+ AS D S
Sbjct: 124 EYECASVLTDHS 135
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFA-LDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H V V WS L S S+D ++ I+ +D + + ++ GH +V L +H++
Sbjct: 134 HSQDVKHVVWSPKENALVSASYDNTIKIYKEVDDDWECSHTLI--GHESTVWSLSFHSSG 191
Query: 109 PDLLSTASGDKTVRIW 124
+L + DK ++IW
Sbjct: 192 -ELFVSCGDDKVLKIW 206
Score = 76 (31.8 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/114 (22%), Positives = 54/114 (47%)
Query: 135 LASGSFDKSVAIFA-LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
L S S+D ++ I+ +D + + ++ GH +V L +H++ +L + DK ++IW
Sbjct: 150 LVSASYDNTIKIYKEVDDDWECSHTLI--GHESTVWSLSFHSSG-ELFVSCGDDKVLKIW 206
Query: 194 DA-RTQKSQI----IAT-KGEN----INITWAPNGNTIAVGNKEDLVTFIDVVK 237
++ S + I T G + ++ W+ N IA +D + +V+
Sbjct: 207 KCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFSIVR 260
Score = 76 (31.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/87 (21%), Positives = 43/87 (49%)
Query: 112 LSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKG-DLNKEVV----YRGHTG 166
+ T +G I+D K +A+ D ++ IF++ + ++ +++ Y+ H
Sbjct: 221 ICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIRIFSIVRITISISNQLLFIAYYQAHNH 280
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIW 193
V+ + WH ++L++ S D ++IW
Sbjct: 281 DVNVVRWHPKVDNILASGSDDNCIKIW 307
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 102 (41.0 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 25/110 (22%), Positives = 54/110 (49%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---K 82
DY KH + + E + H + + ++W+ + L S S D ++ ++ + K
Sbjct: 153 DYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPK 212
Query: 83 KGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
+G + + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 213 EGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 99 (39.9 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
Score = 89 (36.4 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 156 (60.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVD 100
H Y H V S+ +S G LAS S D++V ++ LD+KG K ++ HT V
Sbjct: 50 HARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKG---KSSEFKAHTAPVR 106
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML---------ASGSFDKSVAIFALDK 151
+ + A LL TAS DK++++W Q+ L A S D + + +
Sbjct: 107 SVDFSADG-QLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSED 165
Query: 152 K-----GDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKS-QII 203
K NK+ V + SV + NP+ +++A D V+IWD R K Q
Sbjct: 166 KTIKIWDTTNKQCV-NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY 224
Query: 204 ATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+N +++ P GN++ + + V +D+++
Sbjct: 225 QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIE 259
Score = 130 (50.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 54/216 (25%), Positives = 104/216 (48%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H + + S +S + +++A+ S+D + +++L + Y GH V L +
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYR---YVGHKDVVTSLQF 68
Query: 105 HATNPDLLSTASGDKTVRIW--DARTQKSQI-----------------MLASGSFDKSVA 145
+ +LL++AS D+TVR+W D + + S+ +L + S DKS+
Sbjct: 69 -SPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIK 127
Query: 146 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQII 203
++++ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 128 VWSMFRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTNKQCV 179
Query: 204 ATKGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+++ + + PNG IA + V D+
Sbjct: 180 NNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDI 215
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 101 (40.6 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 40/136 (29%), Positives = 59/136 (43%)
Query: 3 CPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK-----VHSV 57
C ++Q HT K Y L + + +V D N + + H K V +
Sbjct: 58 CRILQGHTGKV--YSLDWTPEKNRIVSASQD--GRLIVWNALTSQKTHAIKLPCAWVMTC 113
Query: 58 AWSCDGRRLASGSFDKSVAIFAL----DKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-L 112
A+S G+ +A G D +IF L DK G+ + GH G V C + + D L
Sbjct: 114 AFSPSGQSVACGGLDSVCSIFNLNSPIDKDGNHPVSRMLSGHKGYVSS-CQYVPDEDTHL 172
Query: 113 STASGDKTVRIWDART 128
T+SGD+T +WD T
Sbjct: 173 ITSSGDQTCVLWDITT 188
Score = 98 (39.6 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-QKSQ--IIATKGENINITWAPNGN 219
GHT V + ++NP L + S D T R+WD R ++Q +G+ + + P+GN
Sbjct: 202 GHTADVQSVSISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGN 261
Query: 220 TIAVGNKEDLVTFIDV 235
G+++ D+
Sbjct: 262 RFGTGSEDGTCRLFDI 277
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 49 AHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHA 106
AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H + Q+ W
Sbjct: 270 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSP 326
Query: 107 TNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166
N +L+++ D+ + +WD S+I G ++ A A D +L ++ GHT
Sbjct: 327 HNETILASSGTDRRLNVWDL----SKI----G--EEQSAEDAEDGPPELL--FIHGGHTA 374
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ P ++ + S D ++IW
Sbjct: 375 KISDFSWNPNEPWVICSVSEDNIMQIW 401
Score = 102 (41.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 20/86 (23%), Positives = 46/86 (53%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ + K+G + + + ++ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + IWD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMIWDTRS 258
Score = 98 (39.6 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 221 IAVGNKED 228
I + D
Sbjct: 331 ILASSGTD 338
Score = 89 (36.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 284 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 190 VRIWD 194
+ +WD
Sbjct: 341 LNVWD 345
Score = 73 (30.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D GD + ++ RGH L W++ L +AS D TV +WD A ++ +++ A
Sbjct: 161 DPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 IFTGHSAV 228
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 135 (52.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 44 IKEYQAHGSKVHSVAWS-CDGRRLA-SGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
++ Y+ H +V+SV WS G +L SGS+D++V ++ G N +RGH +
Sbjct: 99 LQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYS 155
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P ++ASGD+T+RIWD +T +I++
Sbjct: 156 TIWSPHIPGCFASASGDQTLRIWDVKTAGVRIVI 189
Score = 131 (51.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 47/162 (29%), Positives = 78/162 (48%)
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH---ATNPDLLSTASGDKTVRI-WD 125
SFD S +F + D +V GS+ QL W AT P + + + W
Sbjct: 58 SFDWSDGLFDVTWSEDNEHVLVTCSGDGSL-QL-WDTAKATGPLQVYKEHTQEVYSVDW- 114
Query: 126 ARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
++T+ Q+++ SGS+D++V ++ G N +RGH + W P ++AS
Sbjct: 115 SQTRGEQLVV-SGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 186 GDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
GD+T+RIWD +T +I+ A + E ++ W N N + G
Sbjct: 171 GDQTLRIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTG 212
Score = 55 (24.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D +V + K L + V + HT L +P ++ S D+T++I+
Sbjct: 252 VLASCSYDFTVRFWNFSKPDPLLETVEH--HTEFTCGLDLSLQSPTEVADCSWDETIKIY 309
Query: 194 D 194
D
Sbjct: 310 D 310
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 235 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 266
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 62/181 (34%), Positives = 94/181 (51%)
Query: 66 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRI 123
LASGS D++V ++ G L + + GH+G V + A +PD LL++ S DKTVR+
Sbjct: 710 LASGSDDETVRLWD-PATGSLQQTL--EGHSGWVLSV---AFSPDGRLLASGSFDKTVRL 763
Query: 124 WDARTQKSQI-------------------MLASGSFDKSVAIFALDKKGDLNKEVVYRGH 164
WD T Q +LASGSFDK+V ++ G L + + RGH
Sbjct: 764 WDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQTL--RGH 820
Query: 165 TGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-SQIIATKGENINITWAPNGNTI 221
+ +V + A +PD LL++ S DKTVR+WD T Q + KG + ++ +G+ I
Sbjct: 821 SDTVRSV---AFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYI 877
Query: 222 A 222
+
Sbjct: 878 S 878
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/130 (38%), Positives = 74/130 (56%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ +LL SGS F ++ D T + + + H + V SVA+S DGR LASGSFD
Sbjct: 746 SPDGRLLASGS-FDKTVRLWDPA----TGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFD 800
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 130
K+V ++ G L + + RGH+ +V + A +PD LL++ S DKTVR+WD T
Sbjct: 801 KTVRLWD-PATGSLQQTL--RGHSDTVRSV---AFSPDGRLLASGSFDKTVRLWDPATGT 854
Query: 131 -SQIMLASGS 139
Q ++ G+
Sbjct: 855 LQQTLIIKGT 864
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/131 (39%), Positives = 73/131 (55%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S DGR LASGSFDK+V ++ G L + + RGH+ V + A
Sbjct: 734 EGHSGWVLSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQTL--RGHSNWVRSV---AF 787
Query: 108 NPD--LLSTASGDKTVRIWDARTQKSQIMLASGSFD-KSVAIFALDKK----GDLNKEV- 159
+PD LL++ S DKTVR+WD T Q L S +SVA F+ D + G +K V
Sbjct: 788 SPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA-FSPDGRLLASGSFDKTVR 846
Query: 160 VYRGHTGSVDQ 170
++ TG++ Q
Sbjct: 847 LWDPATGTLQQ 857
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/167 (29%), Positives = 82/167 (49%)
Query: 111 LLSTASGDKTVRIWDARTQKSQI-------------------MLASGSFDKSVAIFALDK 151
+L++ S D+TVR+WD T Q +LASGSFDK+V ++
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWD-PA 767
Query: 152 KGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-SQIIATKGE 208
G L + + RGH+ V + A +PD LL++ S DKTVR+WD T Q + +
Sbjct: 768 TGSLQQTL--RGHSNWVRSV---AFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSD 822
Query: 209 NI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLME 254
+ ++ ++P+G +A G+ + V D ++TL +G + E
Sbjct: 823 TVRSVAFSPDGRLLASGSFDKTVRLWDPATGT--LQQTLIIKGTVTE 867
>UNIPROTKB|F5H390 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00867659 ProteinModelPortal:F5H390 SMR:F5H390
Ensembl:ENST00000537042 ArrayExpress:F5H390 Bgee:F5H390
Uniprot:F5H390
Length = 282
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 74 (31.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/222 (27%), Positives = 103/222 (46%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNK 88
D +K + H+ + + Q HG V+++A S D L +G+F+ + A + D +G L +
Sbjct: 266 DRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNPQDLQGSL-Q 323
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-------------SQIM- 134
E+ R S L P+ L + S D T+ +W K +Q++
Sbjct: 324 ELKERAL--SRYNLV-RGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLF 380
Query: 135 ------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGD 187
+AS SFDKS+ ++ G K + RGH +V Q+ W A + LL + S D
Sbjct: 381 SPDSRIVASASFDKSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSD 435
Query: 188 KTVRIWDARTQK--SQIIATKGENINITWAPNGNTIAVGNKE 227
T+++WD + QK + E + W+P+G +A G K+
Sbjct: 436 STLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKD 477
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 16 YKLLPSGSQFHLVCKIDDYVKH-FNTHNDIK---EYQAHGSKVHSVAWSCDGRRLASGSF 71
Y L+ LV DD+ ++ D K H + ++ V +S D R +AS SF
Sbjct: 333 YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF 392
Query: 72 DKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
DKS+ ++ D G K + RGH +V Q+ W A + LL + S D T+++WD + QK
Sbjct: 393 DKSIKLW--D--GRTGKYLASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDVKAQK 447
Query: 131 SQIMLASGSFDKSVAIFALDKKGD 154
+ L G D+ ++A+D D
Sbjct: 448 LAMDLP-GHADE---VYAVDWSPD 467
Score = 110 (43.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + + G + V S++WS DGR+LASG
Sbjct: 123 SPTGKYLASGSG-------DTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGC 175
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNPDL--LSTASGDKTVRIWD 125
+ + ++ + + + GH+ + L W HA NP+ ++++S D +VRIWD
Sbjct: 176 KNGQILLWDPSTGKQVGRTLA--GHSKWITGLSWEPLHA-NPECRYVASSSKDGSVRIWD 232
Query: 126 ARTQKSQIML 135
+ + +L
Sbjct: 233 TTAGRCERIL 242
Score = 90 (36.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + +GH V + W
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPHFTCKGHRHWVLSISW--- 164
Query: 108 NPDLLSTASGDKT--VRIWDARTQK 130
+PD ASG K + +WD T K
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGK 189
Score = 89 (36.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 135 LASGSFDKSVAIF--ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 190
L SGS D ++ ++ A DKK L + GH ++Q+ + +PD ++++AS DK++
Sbjct: 344 LVSGSDDFTLFLWSPAEDKK-PLTRMT---GHQALINQVLF---SPDSRIVASASFDKSI 396
Query: 191 RIWDARTQKSQIIATKGENI---NITWAPNGNTIAVGNKEDLVTFIDV 235
++WD RT K + + +G I W+ + + G+ + + DV
Sbjct: 397 KLWDGRTGK-YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Score = 78 (32.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
R +AS S D SV I+ D E + GHT SV L W LL +AS D+T+++
Sbjct: 217 RYVASSSKDGSVRIW--DTTAG-RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 271
Query: 124 WDA 126
W A
Sbjct: 272 WRA 274
Score = 75 (31.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+AS S D SV I+ D E + GHT SV L W LL +AS D+T+++W
Sbjct: 219 VASSSKDGSVRIW--DTTAG-RCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKVWR 273
Query: 195 A 195
A
Sbjct: 274 A 274
Score = 72 (30.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 163 GHTGSVDQLCW---HATNPDL--LSTASGDKTVRIWDARTQKSQIIATKGENINIT---W 214
GH+ + L W HA NP+ ++++S D +VRIWD + + I T G ++T W
Sbjct: 197 GHSKWITGLSWEPLHA-NPECRYVASSSKDGSVRIWDTTAGRCERILT-GHTQSVTCLRW 254
Query: 215 APNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
+G + + + L RTL GH + T +L
Sbjct: 255 GGDGLLYSASQDRTIKVWRAHDGVLC---RTLQGHGHWVNTMAL 295
>UNIPROTKB|E7EW44 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00908316 ProteinModelPortal:E7EW44 SMR:E7EW44
Ensembl:ENST00000453768 UCSC:uc010rps.1 ArrayExpress:E7EW44
Bgee:E7EW44 Uniprot:E7EW44
Length = 289
Score = 117 (46.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 74 (31.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 153 (58.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 53/174 (30%), Positives = 86/174 (49%)
Query: 58 AWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-----YRGHTGSVDQLCWHATNPDLL 112
A +C +RLAS D +V I+ ++K D K +V HT +V+ + + T ++L
Sbjct: 24 AAACRIQRLASAGVDTAVRIWKVEKGPD-GKAIVEFLSNLARHTKAVNVVRFSPTG-EIL 81
Query: 113 STASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQ 170
++ D + +W K +A D++ L+K+ N VV RGH V
Sbjct: 82 ASGGDDAVILLWKMNDSKEPEQIAFQDEDEA----QLNKE---NWTVVKTLRGHLEDVYD 134
Query: 171 LCWHATNPDLLSTASGDKTVRIWD-ARTQKSQIIATKGENIN-ITWAPNGNTIA 222
+CW AT+ +++++AS D TV IWD ++ QK I + +TW P G IA
Sbjct: 135 ICW-ATDGNMMASASVDNTVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIA 187
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKS---LPPRER 244
+I+W+ +G +AV + + +F+ K +P +E+
Sbjct: 358 DISWSSDGAFLAVSSTDGYCSFVTFEKGELGVPLKEK 394
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 133 (51.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 13 SPEYKLLPSGSQFHLVCKI-DDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSF 71
SP +LL + S F I +Y F I + H ++V SV+W+ G LA+ S
Sbjct: 83 SPSGQLLATAS-FDGTTGIWKNYGSEFEC---ISTLEGHENEVKSVSWNASGSCLATCSR 138
Query: 72 DKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
DKSV I+ + + + + V GHT V + WH T D+L + S D T+++W
Sbjct: 139 DKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVW 190
Score = 122 (48.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 50/187 (26%), Positives = 83/187 (44%)
Query: 56 SVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW--HATNPDLLS 113
S +W+C + + + ++V A G L + G TG W + + + +S
Sbjct: 60 SRSWTC--KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTG-----IWKNYGSEFECIS 112
Query: 114 TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173
T G + + S LA+ S DKSV I+ + + + + V GHT V + W
Sbjct: 113 TLEGHEN-EVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW 171
Query: 174 HATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENIN----ITWAPNGNTIAVGNKE 227
H T D+L + S D T+++W + Q + T GE+ N W+ + N A G+K
Sbjct: 172 HPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFN--AAGDK- 227
Query: 228 DLVTFID 234
+VT D
Sbjct: 228 -MVTCSD 233
Score = 108 (43.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V S AWS G+ LA+ SFD + I+ + + GH V + W+A+
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 108 NPDLLSTASGDKTVRIWD 125
L+T S DK+V IW+
Sbjct: 130 G-SCLATCSRDKSVWIWE 146
Score = 58 (25.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 134 MLASGSFDKSVAIF-ALDKKGDLNKEVVY----RGHTGSVDQLCWHATNPDLLSTASGDK 188
+L S S+D ++ ++ + D G+ GH+ +V + ++A D + T S D
Sbjct: 177 VLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAG-DKMVTCSDDL 235
Query: 189 TVRIWDARTQKSQ 201
T++IW K Q
Sbjct: 236 TLKIWGTDIAKMQ 248
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 121 (47.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/185 (25%), Positives = 81/185 (43%)
Query: 31 IDDYVKHFNTHNDIKEY---QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLN 87
+D + +NT+ + Y H + + WS D + + S S D ++A + ++ +
Sbjct: 86 MDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIR 145
Query: 88 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQI--------MLASGS 139
+ Y GH ++ + ++L +AS D T+ IWD R QK I + A
Sbjct: 146 R---YIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPR-QKEAIDYLETELPITAVAQ 201
Query: 140 FDKSVAIFA--LDKK---GDLNKEVVYRGHTGSVDQLCWHATNPD---LLSTASGDKTVR 191
+ +F+ +D D+ K+ + G +D + +PD LLS S D TVR
Sbjct: 202 SEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSN-SFDSTVR 260
Query: 192 IWDAR 196
WD R
Sbjct: 261 TWDIR 265
Score = 102 (41.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I E H +V +V + + +ASGS D+S+ ++ + G + GH G++ L
Sbjct: 59 IMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLW--NTYGQCENYGILSGHKGAILDLQ 116
Query: 104 WHATNPDLLSTASGDKTVRIWD 125
W + + S AS D T+ WD
Sbjct: 117 WSRDSKTIFS-ASADMTLASWD 137
Score = 94 (38.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHAT-NP--DLLSTASG 186
SQ +L S SFD +V + + N+ + Y G +++ A+ NP D ++ SG
Sbjct: 247 SQTLL-SNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSG 305
Query: 187 DKTVRIWDARTQKS--QIIATKGENINITWAPNGNTIAVGNKED 228
D++V +WD +T K ++ KG ++ + PN I V D
Sbjct: 306 DRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSD 349
Score = 78 (32.5 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 31/110 (28%), Positives = 46/110 (41%)
Query: 137 SGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
SG D ++ ++ + KK +VY GH ++ L + LLS S D TVR WD
Sbjct: 210 SGGIDNAIHVWDIRKKA-----IVYSMAGHMDTITSLEVSPDSQTLLSN-SFDSTVRTWD 263
Query: 195 AR----------TQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
R T + + I +W P G+ IA G+ + V D
Sbjct: 264 IRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWD 313
Score = 67 (28.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 17/60 (28%), Positives = 36/60 (60%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
+A+GS D+SV ++ K G +++Y+ GH G+V+ + + N ++ +AS D+ + +
Sbjct: 300 IAAGSGDRSVVVWDF-KTG----KILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 129 (50.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 44 IKEYQAHGSKVHSVAWS-CDGRRLA-SGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVD 100
++ Y+ H +V+SV WS G +L SGS+D++V ++ D + K + +RGH +
Sbjct: 104 LQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLW--DPT--VGKSLCTFRGHESIIY 159
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P ++ASGD+T+RIWD + +I++
Sbjct: 160 STIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVI 194
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 31/105 (29%), Positives = 57/105 (54%)
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLS 182
W ++T+ Q+++ SGS+D++V ++ D + K + +RGH + W P +
Sbjct: 119 W-SQTRGEQLVV-SGSWDQTVKLW--DPT--VGKSLCTFRGHESIIYSTIWSPHIPGCFA 172
Query: 183 TASGDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
+ASGD+T+RIWD + +I+ A + E ++ W N N + G
Sbjct: 173 SASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTG 217
Score = 60 (26.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D +V + K L + V + HT L + +P ++ S D+T++I+
Sbjct: 257 VLASCSYDFTVRFWNFSKPDSLLETVEH--HTEFTCGLDFSLQSPTQVADCSWDETIKIY 314
Query: 194 D 194
D
Sbjct: 315 D 315
Score = 51 (23.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 240 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 271
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/195 (28%), Positives = 94/195 (48%)
Query: 21 SGSQFHLVCKIDDYVKHFNTHNDIKE--YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIF 78
S S L C D +++++ + YQ H V + S AS S D++ ++
Sbjct: 352 SDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLW 411
Query: 79 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG 138
+ D+ L +Y GH VD + +H N + L+T S DKTVR+W + Q + + L +G
Sbjct: 412 SFDRTYPLR---IYAGHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQ-QGNSVRLFTG 466
Query: 139 --------SFD---KSVAIFALDKK---GDLNKEVVY---RGHTGSVDQLCWHATNPDLL 181
+F K +A D++ DL +Y RGHT ++ L + + + L+
Sbjct: 467 HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF-SPDSSLI 525
Query: 182 STASGDKTVRIWDAR 196
++AS D +VR+WD R
Sbjct: 526 ASASMDNSVRVWDIR 540
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WD + AS S D++ +++ D+ L +Y GH VD + +H N + L+
Sbjct: 387 VWDLDISPCSLYFASASHDRTARLWSFDRTYPLR---IYAGHLLDVDCVKFHP-NSNYLA 442
Query: 183 TASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T S DKTVR+W + S + T +G + + ++PNG +A ++ + D+
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 241 PRERTLTSRGHLMETRSL 258
+E RGH SL
Sbjct: 503 YKEL----RGHTDNITSL 516
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/225 (25%), Positives = 109/225 (48%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V + + + I + Q H ++++A+S DG+R+ + + D + ++ ++ + V +
Sbjct: 327 VWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIESGFCI---VTFTE 383
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDA-RTQKSQIMLASGSFDKSVAIFALDKKG 153
HT V C A ++L TAS D ++R WD R + + A S + A+D G
Sbjct: 384 HTSGVTA-CQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRL--SFSCMAVDPSG 440
Query: 154 DL-------NKEV-VYRGHTGSV-DQLCWH-------ATNPD--LLSTASGDKTVRIWDA 195
++ + +V ++ TG + DQL H A PD LL + S DKT RIW
Sbjct: 441 EVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSV 500
Query: 196 --RTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKS 238
RTQ S+ + + + +++ P+ + +AV + ++F V ++
Sbjct: 501 FNRTQTSEPLQLQADVLSVAVRPDSSQLAVSTLDGQISFWSVTEA 545
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 148 (57.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 43/116 (37%), Positives = 65/116 (56%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
S + ++L SGSQ KI + T I+ + AH V S+++S DG +L S SFD
Sbjct: 272 SRDSEMLASGSQDG---KIK--IWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFD 326
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
++ I L K G L KE +RGHT V+ + + ++ TAS D TV++WD++T
Sbjct: 327 QTARIHGL-KSGKLLKE--FRGHTSYVNHAIFTSDGSRII-TASSDCTVKVWDSKT 378
Score = 104 (41.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
L S SFD++ I L K G L KE +RGHT V+ + + ++ TAS D TV++WD
Sbjct: 320 LLSTSFDQTARIHGL-KSGKLLKE--FRGHTSYVNHAIFTSDGSRII-TASSDCTVKVWD 375
Query: 195 ART 197
++T
Sbjct: 376 SKT 378
Score = 87 (35.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 18 LLPSGSQFHL---VCKIDDYVKHFNTHNDIKEYQAH-GSKVHS--VAWSCDGRRLASGSF 71
LLP G+QF L + V+ +TH ++ + G K H+ +S DG+ LAS S
Sbjct: 176 LLPPGTQFDLFRGTAAMKQDVE--DTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSV 233
Query: 72 DKSVAIFALDKKGDLNKEVVYRGHTGSV--DQ--LCWH-ATNPDLLSTASGDKTVRIWDA 126
D + ++ G L K++ Y+ + D LC + + ++L++ S D ++IW
Sbjct: 234 DGFIEVWDYIS-GKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRI 292
Query: 127 RT 128
RT
Sbjct: 293 RT 294
Score = 43 (20.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 174 HATNPDLLSTASGDKTVRIW 193
H + +LL+T S D T+++W
Sbjct: 490 HHPHRNLLATYSEDCTMKLW 509
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 135 (52.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 44 IKEYQAHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
++ Y+ H +V+SV WS D + + SGS+D++V ++ G N +RGH +
Sbjct: 99 LQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYS 155
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P ++ASGD+T+RIWD +T +I++
Sbjct: 156 TIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI 189
Score = 127 (49.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 70 SFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH---ATNPDLLSTASGDKTVRI-WD 125
SFD + +F D N E V +G W AT P + + + W
Sbjct: 58 SFDWNDGLF--DVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW- 114
Query: 126 ARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
++T+ Q+++ SGS+D++V ++ G N +RGH + W P ++AS
Sbjct: 115 SQTRDEQLVV-SGSWDQTVKVWD-PTVG--NSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 186 GDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
GD+T+RIWD +T +I+ A + E ++ W N N + G
Sbjct: 171 GDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTG 212
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 235 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 266
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 60/210 (28%), Positives = 98/210 (46%)
Query: 20 PSGSQFHLVCKIDDYVKHFNT--HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAI 77
P G F L D ++ ++T + ++ Y+ H V +S G AS S D++ I
Sbjct: 428 PPGD-FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARI 486
Query: 78 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-QIMLA 136
+++D+ L + GH VD + WH N + ++T S DKTVR+WD +T + +I +
Sbjct: 487 WSMDRIQPLR---IMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTGECVRIFIG 542
Query: 137 SGSFDKSVAIF-------ALDKKG-----DLNKE---VVYRGHTGSVDQLCWHATNPDLL 181
S S+A+ + D+ G DL+ GH V L + LL
Sbjct: 543 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEG-SLL 601
Query: 182 STASGDKTVRIWDARTQKSQIIATKGENIN 211
++ S D TV++WD T +++ TK E N
Sbjct: 602 ASGSADCTVKLWDV-TSSTKL--TKAEEKN 628
Score = 142 (55.0 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 33/115 (28%), Positives = 61/115 (53%)
Query: 123 IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 182
+WDA+ AS S D++ I+++D+ L + GH VD + WH N + ++
Sbjct: 463 VWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLR---IMAGHLSDVDCVQWHP-NCNYIA 518
Query: 183 TASGDKTVRIWDARTQKSQ--IIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
T S DKTVR+WD +T + I + +++ +P+G +A G+++ + D+
Sbjct: 519 TGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 150 (57.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I + H + +V +S G+ L + S DK+V I+ + DL+ E GH V+
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS---DLSCERTLTGHKLGVNDFA 128
Query: 104 WHATNPDLLSTASGDKTVRIWD------ARTQKSQI-------------MLASGSFDKSV 144
W A + ++ TAS DKT++I++ A+T K ++ SGSFD+SV
Sbjct: 129 WSADSKSIV-TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 145 AIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIA 204
I+ + + G K + H+ V + ++ L+++ S D VRIWD T Q +
Sbjct: 188 RIWDV-RTGMCVKTLP--AHSDPVSAVSFNRDG-SLITSGSYDGLVRIWD--TANGQCVK 241
Query: 205 TKGENIN-----ITWAPNGNTIAVGNKEDLVTFIDVVK 237
T ++ N + ++PNG I N ++ + D K
Sbjct: 242 TLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGK 279
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 55/189 (29%), Positives = 78/189 (41%)
Query: 6 IQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDG 63
I+ HT K P G +F D VK +N + E G K V+ AWS D
Sbjct: 75 IEGHTKSISAVKFSPCG-KFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTV 121
+ + + S DK++ I+ + + +GHT V C + NP L+ + S D++V
Sbjct: 134 KSIVTASDDKTLKIYEVPT---VKMAKTLKGHTNYV--FCCNF-NPQSSLVVSGSFDESV 187
Query: 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC--WHATNPD 179
RIWD RT L + S S F D G L +GS D L W N
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRD--GSLIT-------SGSYDGLVRIWDTANGQ 238
Query: 180 LLSTASGDK 188
+ T D+
Sbjct: 239 CVKTLVDDE 247
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ +L+ +GS ++V D +F ++ Y+ H V+SVA+S DG+ LASGS D
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYF-----LERYEGHLDSVYSVAFSPDGKSLASGSLD 478
Query: 73 KSVAIFALDKKGDLNK-EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
KS+ ++ L ++ + GH V + + L+S S D++V+ WD R +
Sbjct: 479 KSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLIS-GSKDRSVQFWDPRNGTT 537
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 173
+ML SV AL K N V+ +G W
Sbjct: 538 HMMLQGHK--NSVISVALSPKN--NSHGVFATGSGDFRSRLW 575
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ L +G++ V D + K H + H ++S+ +S DGR + SGS D
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQ-HT----FYGHELDIYSLDYSSDGRFIVSGSGD 390
Query: 73 KSVAIFALDKKG---DLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDAR 127
K I+ ++K L E V G V + A +PD L++ S D VR+WDA+
Sbjct: 391 KKAKIWDIEKGKCAFTLGNEEV--GPKNGVTSV---AMSPDGRLVAAGSLDNIVRLWDAQ 445
Query: 128 T 128
T
Sbjct: 446 T 446
Score = 59 (25.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRI 192
L SGS D+SV + D + ++ +GH SV + N + +T SGD R+
Sbjct: 518 LISGSKDRSVQFW--DPRNGTT-HMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRL 574
Query: 193 W 193
W
Sbjct: 575 W 575
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 153 (58.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 56/209 (26%), Positives = 97/209 (46%)
Query: 41 HNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG-SV 99
++D++ + H S+V + AWS LASGS D + I+++ + G K V HTG ++
Sbjct: 255 NSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPE-GSF-KAV----HTGRNI 308
Query: 100 DQLCW-HATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKE 158
+ L HA + S D T W+ +LA+GS D I+ L+ G+L
Sbjct: 309 NALILKHAKGKS--NEKSKDVTTLDWNGEGT----LLATGSCDGQARIWTLN--GELIST 360
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--KSQIIATKGENINITWAP 216
+ H G + L W+ D L T S D+T +WD + + K Q G +++ W
Sbjct: 361 L--SKHKGPIFSLKWNKKG-DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR- 416
Query: 217 NGNTIAVGNKEDLVTFIDVVKSLPPRERT 245
N + A + + ++ + ++ P + T
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFT 445
Score = 98 (39.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
Q+ LAS SFD +V ++ +L K + + GH V L + + N + +++ S DK++
Sbjct: 511 QLTLASASFDSTVKLW----DAELGKMLCSFNGHREPVYSLAF-SPNGEYIASGSLDKSI 565
Query: 191 RIWDARTQKSQIIAT---KGENINITWAPNGNTIAVGNKEDLVTFID 234
IW + K I+ T G + W GN IA ++ V +D
Sbjct: 566 HIWSIKEGK--IVKTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 85 (35.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
++++ H V W + A+ S D + L K G+ + GH G V+ + W
Sbjct: 401 QQFEFHSGPTLDVDWR-NNVSFATSSTDSMIY---LCKIGETRPAKTFTGHQGEVNCVKW 456
Query: 105 HATNPDLLSTASGDKTVRIWDAR 127
T LL++ S D T +IW+ +
Sbjct: 457 DPTG-SLLASCSDDSTAKIWNIK 478
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 53/199 (26%), Positives = 85/199 (42%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
EY H S V+SV W+ G LA GS D ++++ + G + + HT + +
Sbjct: 98 EYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I K ASG D V I+ ++ G +E
Sbjct: 158 WAPAVVPGSLIEQPSGQKPNYI------KR---FASGGCDNLVKIWK-EEDGQWKEEQKL 207
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW---DARTQK-SQIIATKGENI--NI 212
H+ V + W + P +++ S D V IW DA S + K ++ ++
Sbjct: 208 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGSSWSPKLLHKFNDVVWHV 267
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 268 SWSITANILAVSGGDNKVT 286
Score = 113 (44.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 33/102 (32%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N I + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K Y GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 104 (41.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 87 (35.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K Y GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWK-EENGTWEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 W----DARTQKSQIIATKGENIN-ITWAP 216
D + + +I N ++WAP
Sbjct: 132 LSYTGDGQWEVKKISNAHTIGCNAVSWAP 160
Score = 44 (20.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 135 LASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D V I+ D G + V + W T ++L+ + GD V +W
Sbjct: 230 IASCSQDGRVFIWTCDDASGSSWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLW 288
>DICTYBASE|DDB_G0287259 [details] [associations]
symbol:cdh1 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0287259 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GenomeReviews:CM000154_GR GO:GO:0016567 EMBL:AAFI02000099
RefSeq:XP_637334.1 ProteinModelPortal:Q54KM3 STRING:Q54KM3
EnsemblProtists:DDB0266709 GeneID:8626032 KEGG:ddi:DDB_G0287259
KO:K03364 OMA:DESHLAY Uniprot:Q54KM3
Length = 754
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 59/228 (25%), Positives = 101/228 (44%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTG 97
N I+E Q H ++V+++AW+ L+SG DK + + D + +V GH
Sbjct: 485 NKKKKIRELQGHNTRVNALAWN--NHILSSGGKDKVILHHDVRDCSNNYTNRLV--GHRH 540
Query: 98 SVDQLCWHATNPDLLSTASG--DKTVRIWD-ARTQKSQIMLASGS---FDKSVAIFALDK 151
+ L W +PD ASG D + +WD + TQ+ Q + +I +
Sbjct: 541 EICGLKW---SPDGQQLASGGNDNLLNVWDHSMTQQPQQQHQPPPPPPSSNTSSISQQQQ 597
Query: 152 KGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWDARTQKS-QIIATKG 207
+ + +K + ++ H +V + W LL++ G DK +R W+ T +S Q I T
Sbjct: 598 QQNTSKPLYQFKFHYAAVKAIAWSPHQRGLLASGGGTHDKCIRFWNTTTGQSIQSIDTGS 657
Query: 208 ENINITWAPNGNTIAV--GNKEDLVTFIDVVKSLPPRERTLTSRGHLM 253
+ N+ W+ N N + G ++ +T V + P T GH M
Sbjct: 658 QVCNLAWSKNINELVSTHGYSQNQIT----VWNYPTMTPVTTLTGHTM 701
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 104 WHATNPD---LLSTASGDKTVRI-WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV 159
W+AT L SG + W Q+ I LA G D V+I+ ++KK + +E+
Sbjct: 438 WNATTSQVSKLCEMESGQPVSSVGW---IQRGGIHLAIGGTDGVVSIWDVNKKKKI-REL 493
Query: 160 VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR----TQKSQIIATKGENINITWA 215
+GH V+ L W N +LS+ DK + D R ++++ + E + W+
Sbjct: 494 --QGHNTRVNALAW---NNHILSSGGKDKVILHHDVRDCSNNYTNRLVGHRHEICGLKWS 548
Query: 216 PNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
P+G +A G ++L+ D + P+++
Sbjct: 549 PDGQQLASGGNDNLLNVWDHSMTQQPQQQ 577
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 103 (41.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183
WD ++ S ++ D +V F + DL+ + H V + ++ P+LL+T
Sbjct: 310 WDPHSEHSFVVSLK---DGTVKGFDT-RASDLSPSFIIHAHDSEVSSISYNIHAPNLLAT 365
Query: 184 ASGDKTVRIWDARTQKSQIIATK----GENINITWAPNGN-TIAVGNKEDL 229
S D++V++WD + IAT GE +++++ + +AVG E L
Sbjct: 366 GSADESVKLWDLSNNQPSWIATNKPNAGEVFSVSFSADCPFLLAVGGSEGL 416
Score = 92 (37.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 63 GRRLASGSFDKSVAIFALDKK---GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDK 119
G +A G+ + S+ I+ LD L HTG V L W+ +++++ S DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDK 239
Query: 120 TVRIWDARTQKSQIML 135
V++WD T K ++ +
Sbjct: 240 KVKVWDVATGKCKVTM 255
Score = 89 (36.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 49 AHGSKVHSVAWSCDGRRL-ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+H V +AW+ + R + ASGS DK V ++ + G +V H V + W+
Sbjct: 214 SHTGPVIDLAWNKEFRNIVASGSEDKKVKVWDV-ATGKC--KVTMEHHEKKVHAVAWNNY 270
Query: 108 NPDLLSTASGDKTVRIWDAR 127
P++L + S D+TV + D R
Sbjct: 271 TPEVLLSGSRDRTVVLKDGR 290
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 151 (58.2 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 46/116 (39%), Positives = 64/116 (55%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLC 103
K H V+ V +S DG+ +AS SFDKSV ++ G + V V+RGH G V Q+
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW----NGITGQFVTVFRGHVGPVYQVS 409
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV 159
W A + LLS S D T++IW+ RT+K + L G D+ +FA+D D K V
Sbjct: 410 WSADSRLLLS-GSKDSTLKIWEIRTKKLKQDLP-GHADE---VFAVDWSPDGEKVV 460
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 54/178 (30%), Positives = 79/178 (44%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ K L SGS V D Y T + + H + V +VAWS DG+ L SGS
Sbjct: 118 SPDGKQLASGSGDTTVRLWDLY-----TETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKS 172
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNP-DLLSTASGDKTVRIWDART 128
+ + KKG+L + GH + + W H ++P T+S D RIWD
Sbjct: 173 GEICCWN-PKKGELEGSPL-TGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITL 230
Query: 129 QKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG 186
+KS I L SG ++A+ + GD ++Y G ++ W T L+ G
Sbjct: 231 KKSIICL-SGH---TLAVTCVKWGGD---GIIYTGSQDCTIKM-WETTQGKLIRELKG 280
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
+ ++AW+ +GRRL +G+ S F L N E + + H SV + W + N +
Sbjct: 149 IFTLAWTPEGRRLVTGA---SSGEFTLWNGLTFNFETILQAHDISVRTMVW-SHNDSWMV 204
Query: 114 TASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK-------GDLN--------KE 158
T V+ W + ++ A + ++ D K G L +E
Sbjct: 205 TGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEE 264
Query: 159 VVYRGHTGSVDQLCWHATNPDLLS-TASGDKTVRIWDART--QKSQIIATKGENINITWA 215
V RGH V + WH ++S + + ++IWD ++ + + A K +++ W
Sbjct: 265 RVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWN 324
Query: 216 PNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL-W 259
NGN + +++ L+ D+ ++L RE RGH E S+ W
Sbjct: 325 DNGNWLVTASRDHLLKLFDI-RNL--REEVQVFRGHKKEASSVSW 366
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/222 (22%), Positives = 100/222 (45%)
Query: 34 YVKHFNTH-NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDK-------KGD 85
YVK++ ++ N++K YQAH + +++S + SGS D ++ I+ + +G
Sbjct: 211 YVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGH 270
Query: 86 -LNKEVVY----RGH--TGSVDQL----CWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
+ + V+ +G +GS D W + L+T K+ + D + +
Sbjct: 271 GADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKST-VMDLKWNDNGNW 329
Query: 135 LASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
L + S D + +F + +L +EV V+RGH + WH + L + D ++ W
Sbjct: 330 LVTASRDHLLKLFDIR---NLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW 386
Query: 194 DARTQKS-QIIATKGENI--NITWAPNGNTIAVGNKEDLVTF 232
+ T K + T ++I + W P G+ + G+ + + F
Sbjct: 387 NVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKF 428
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 49/211 (23%), Positives = 92/211 (43%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
QAH V ++ WS + + +G V + + ++N +Y+ H ++ + + T
Sbjct: 185 QAHDISVRTMVWSHNDSWMVTGDHGGYVKYW----QSNMNNVKMYQAHKEAIRGISFSPT 240
Query: 108 NPDLLSTASGDKTVRIWD-ARTQKSQI------------------MLASGSFDKSVAIFA 148
+ +S S D T+RIWD R Q+ ++ M+ SGS D I
Sbjct: 241 DSKFVS-GSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKI 299
Query: 149 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG- 207
D K + ++ H +V L W+ N + L TAS D ++++D R + ++ +G
Sbjct: 300 WDPKSGIALATLH-AHKSTVMDLKWN-DNGNWLVTASRDHLLKLFDIRNLREEVQVFRGH 357
Query: 208 --ENINITWAP-NGNTIAVGNKEDLVTFIDV 235
E +++W P + G + + F +V
Sbjct: 358 KKEASSVSWHPIHEGLFCSGGSDGSILFWNV 388
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGE 208
+R WD +K Q+++ +GE
Sbjct: 213 IRFWDL--EKFQVVSCIEGE 230
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+CDG LA+GS+D I+ D G L + H G + L W+ +LS
Sbjct: 413 VTSLDWNCDGSLLATGSYDGYARIWKTD--GRLASTLGQ--HKGPIFALKWNKCGNYILS 468
Query: 114 TASGDKTVRIWDARTQK--SQIMLASG-SFD------KSVAIFALDKKGDL-----NKEV 159
A DKT IWDA T + Q S + D ++ A + D++ + N+ +
Sbjct: 469 -AGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPI 527
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W LL++ S D T++IW + + A E I W+P
Sbjct: 528 KTFKGHTNEVNAIKW-CPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSP 586
Query: 217 NG 218
G
Sbjct: 587 TG 588
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/115 (33%), Positives = 62/115 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DG+ LASGSFD
Sbjct: 593 NPNTNLILASASFDSTVRLWDVERGSCIHTLTK----HTEPVYSVAFSPDGKHLASGSFD 648
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I++ + G L Y+G TG + ++CW++ + ++AS D +V + D R
Sbjct: 649 KCVHIWST-QTGQLVHS--YKG-TGGIFEVCWNSKGTKVGASAS-DGSVFVLDLR 698
Score = 109 (43.4 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 33/129 (25%), Positives = 63/129 (48%)
Query: 7 QFHTPKSPEYKLLPSGSQFHLVCKIDD--YVKHFNTHNDIKEYQAHGSKVHSVAWSCDGR 64
QF +P + +Q C D +V + IK ++ H ++V+++ W G+
Sbjct: 488 QFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQ 547
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT-----NPD---LLSTAS 116
LAS S D ++ I+++++ + + H+ + + W T NP+ +L++AS
Sbjct: 548 LLASCSDDMTLKIWSMNRDRCCHD---LQAHSKEIYTIKWSPTGPGTNNPNTNLILASAS 604
Query: 117 GDKTVRIWD 125
D TVR+WD
Sbjct: 605 FDSTVRLWD 613
Score = 86 (35.3 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DK 188
+ ++LAS SFD +V ++ +++ ++ HT V + A +PD ASG DK
Sbjct: 596 TNLILASASFDSTVRLWDVERGSCIH---TLTKHTEPVYSV---AFSPDGKHLASGSFDK 649
Query: 189 TVRIWDARTQKSQIIAT-KGEN--INITWAPNGNTIAVGNKEDLVTFIDVVK 237
V IW TQ Q++ + KG + W G + + V +D+ K
Sbjct: 650 CVHIWS--TQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLRK 699
>UNIPROTKB|F1MK51 [details] [associations]
symbol:CORO1B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:DAAA02063620 EMBL:DAAA02063621
IPI:IPI00699043 Ensembl:ENSBTAT00000006281 ArrayExpress:F1MK51
Uniprot:F1MK51
Length = 330
Score = 115 (45.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 96 VIASGSEDCTVMVWQIPENGLVSPLTEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNM 155
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 156 VLIWNVGTAEELYRLDSLHPDLIYNVSWNRNGSLFCTACKDKSVRVIDPRRGTLVAEREK 215
Query: 247 TSRG 250
G
Sbjct: 216 AHEG 219
Score = 74 (31.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 61 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 109
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 151 (58.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 62/222 (27%), Positives = 107/222 (48%)
Query: 32 DDYVKHFNTHNDI--KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA-IFALDKKGDLNK 88
D +K + + + I + Q H V+++A S D L +G+F+ + A I D G L
Sbjct: 279 DRTIKVWRSQDGILCRTLQGHAHWVNTMALSTD-YVLRTGAFEPAEATINPQDMSGSL-A 336
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW-DARTQK------------SQIM- 134
E+ + D++ P+ L + S D T+ +W A +K +Q++
Sbjct: 337 ELKDKAQQ-RYDKV--RGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLF 393
Query: 135 ------LASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGD 187
+AS SFDKS+ ++ +G K + RGH +V Q+ W A + LL + S D
Sbjct: 394 SPDTRIIASASFDKSIKLW----EGRTGKYLTSLRGHVSAVYQIAWSADSR-LLVSGSSD 448
Query: 188 KTVRIWDARTQKSQI-IATKGENINIT-WAPNGNTIAVGNKE 227
T+++WDA T+K I + + + T W+P+G +A G K+
Sbjct: 449 STLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKD 490
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/119 (35%), Positives = 60/119 (50%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGS 70
SP K L SGS D V+ ++ + ++ A G + V S+AWS DG++LASG
Sbjct: 136 SPTGKYLASGSG-------DTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGC 188
Query: 71 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTVRIWD 125
K+ IF D V GH+ + LCW NP+ L++AS D ++RIWD
Sbjct: 189 --KNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD 245
Score = 89 (36.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 39/130 (30%), Positives = 57/130 (43%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT--NPDL--LSTASGDKTV 190
LASG K+ IF D V GH+ + LCW NP+ L++AS D ++
Sbjct: 184 LASGC--KNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 191 RIWDARTQKSQIIATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLPPRE-RTLTS 248
RIWD + I T G ++T G+ + + +D I V +S RTL
Sbjct: 242 RIWDTLMGRCDKILT-GHTQSVTCVKWGGDGLLYSSSQDRT--IKVWRSQDGILCRTLQG 298
Query: 249 RGHLMETRSL 258
H + T +L
Sbjct: 299 HAHWVNTMAL 308
Score = 88 (36.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H V SVA+S G+ LASGS D +V + L + + +GH V + W
Sbjct: 124 EGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPQFTAKGHRHWVLSIAW--- 177
Query: 108 NPDLLSTASGDKTVRI--WDART 128
+PD ASG K +I WD T
Sbjct: 178 SPDGKKLASGCKNSQIFLWDPAT 200
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
GHT +V + + T L++ SGD TVR WD T+ Q
Sbjct: 125 GHTEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPQ 162
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/182 (31%), Positives = 83/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 224 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 279
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 280 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQERPI 338
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T+++W + T + A E I W+P
Sbjct: 339 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSP 397
Query: 217 NG 218
G
Sbjct: 398 TG 399
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H V+SVA+S DGR LASGSFDK V I+ +N YRG TG + ++CW++T
Sbjct: 438 HQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNS---YRG-TGGIFEVCWNSTG- 492
Query: 110 DLLSTASGDKTVRIWDAR 127
D + ++ D +V + D R
Sbjct: 493 DKVGASASDGSVCVLDLR 510
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/182 (31%), Positives = 82/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DGR LASGSFD
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFD 463
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 464 KCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLDLR 513
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
NK VV RGH V W+ + DLL++ SGD T RIW+ ++ S SGS + +
Sbjct: 160 NKAVVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNL-SENS----TSGS--TQLVL 211
Query: 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT- 205
++G ++V S+D W++ LL+T S D RIW + +
Sbjct: 212 RHCIREG--GQDVPSNKDVTSLD---WNSEGT-LLATGSYDGFARIWTKDGNLASTLGQH 265
Query: 206 KGENINITWAPNGNTI 221
KG + W GN I
Sbjct: 266 KGPIFALKWNKKGNFI 281
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/182 (31%), Positives = 82/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DGR LASGSFD
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFD 463
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 464 KCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLDLR 513
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
NK VV RGH V W+ + DLL++ SGD T RIW+ ++ S SGS + +
Sbjct: 160 NKAVVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNL-SENS----TSGS--TQLVL 211
Query: 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT- 205
++G ++V S+D W++ LL+T S D RIW + +
Sbjct: 212 RHCIREG--GQDVPSNKDVTSLD---WNSEGT-LLATGSYDGFARIWTKDGNLASTLGQH 265
Query: 206 KGENINITWAPNGNTI 221
KG + W GN I
Sbjct: 266 KGPIFALKWNKKGNFI 281
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/182 (31%), Positives = 82/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DGR LASGSFD
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFD 463
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 464 KCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLDLR 513
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 57/182 (31%), Positives = 82/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DGR LASGSFD
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFD 463
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 464 KCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLDLR 513
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 57/182 (31%), Positives = 82/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T K Q S + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 109
H V+SVA+S DGR LASGSFDK V I+ + G L YRG TG + ++CW+A
Sbjct: 444 HQEPVYSVAFSPDGRYLASGSFDKCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG- 498
Query: 110 DLLSTASGDKTVRIWDAR 127
D + ++ D +V + D R
Sbjct: 499 DKVGASASDGSVCVLDLR 516
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
NK VV RGH V W+ + DLL++ SGD T RIW+ ++ S SGS + +
Sbjct: 160 NKAVVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNL-SENS----TSGS--TQLVL 211
Query: 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT- 205
++G ++V S+D W++ LL+T S D RIW + +
Sbjct: 212 RHCIREG--GQDVPSNKDVTSLD---WNSEGT-LLATGSYDGFARIWTKDGNLASTLGQH 265
Query: 206 KGENINITWAPNGNTI 221
KG + W GN I
Sbjct: 266 KGPIFALKWNKKGNFI 281
Score = 95 (38.5 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
IK +Q H ++V+++ W G LAS S D ++ I+++ + ++ + H + +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHD---LQAHNKEIYTIK 398
Query: 104 WHAT-----NPDL------LSTASGDKTVRIWD 125
W T NP+ L +AS D TVR+WD
Sbjct: 399 WSPTGPGTNNPNANLMLASLDSASFDSTVRLWD 431
Score = 89 (36.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 460 LASGSFDKCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLD 514
Query: 195 AR 196
R
Sbjct: 515 LR 516
Score = 82 (33.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 7 QFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDG- 63
Q HT + K P+G+ C D +K ++ D + + QAH +++++ WS G
Sbjct: 346 QGHTNEVNAIKWDPTGNLL-ASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGP 404
Query: 64 -----------RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD-- 110
L S SFD +V ++ +D+ ++ ++ SV A +PD
Sbjct: 405 GTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSV------AFSPDGR 458
Query: 111 LLSTASGDKTVRIWDART 128
L++ S DK V IW+ +T
Sbjct: 459 YLASGSFDKCVHIWNTQT 476
>WB|WBGene00018891 [details] [associations]
symbol:F55F8.3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0040007 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:FO081477 PIR:T29585
RefSeq:NP_491653.2 ProteinModelPortal:P91341 SMR:P91341
STRING:P91341 PaxDb:P91341 EnsemblMetazoa:F55F8.3 GeneID:172224
KEGG:cel:CELE_F55F8.3 UCSC:F55F8.3 CTD:172224 WormBase:F55F8.3
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 InParanoid:P91341
KO:K14558 OMA:VWQCDTP NextBio:874579 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 Uniprot:P91341
Length = 910
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V + + + + + QAH ++ + +S DG +A+G+ D V I+ + + V +
Sbjct: 344 VWEWQSESYVMKQQAHSLRITTAEYSPDGSLMATGAEDGKVKIW--NSRSSFCT-VTFDE 400
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
HT V + W + +LS AS D TVR D + ++ L +A A+DK GD
Sbjct: 401 HTSGVTAVKWTQSGRAILS-ASLDGTVRAHDLKRYRNFRTLVCPE-PTQLATLAVDKAGD 458
Query: 155 L----NKEV----VYRGHTGSV-DQLCWHAT---NPDL----LSTASGDKTVRIWDARTQ 198
L KEV ++ TG + D L H + + D+ + + S D+T+++W
Sbjct: 459 LVIAGAKEVFNIYIWSFETGHLLDILSGHESAISSIDIHGNHIVSGSWDRTIKMWTIVDS 518
Query: 199 KSQIIATKGENINITWAPNGNTIAVGNKEDLVTFID 234
+++ + E +++ ++P G+ IAV + ++TF +
Sbjct: 519 QAETVEVSHEALDVKFSPAGDEIAVLTSDGVITFFE 554
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 140 (54.3 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 55/182 (30%), Positives = 83/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ DG LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 241 VTSLDWNSDGTLLATGSYDGFARIWTED--GNLASTLGQ--HKGPIFALKWNKKGNYILS 296
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LDK-----KGDLNKEV 159
A DKT IWDA T K Q S + D ++ FA D + ++ V
Sbjct: 297 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + + A E I W+P
Sbjct: 356 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 217 NG 218
G
Sbjct: 415 TG 416
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + H K H V+SVA+S DG+ LASGSFD
Sbjct: 421 NPNSNIMLASASFDSTVRLWDVERGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFD 476
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 477 KCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 526
Score = 105 (42.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ + ++ + H+ + +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD---LQAHSKEIYTIK 411
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWD 441
Score = 91 (37.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 470 LASGSFDKCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 524
Query: 195 AR 196
R
Sbjct: 525 LR 526
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 140 (54.3 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 55/182 (30%), Positives = 83/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ DG LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 241 VTSLDWNSDGTLLATGSYDGFARIWTED--GNLASTLGQ--HKGPIFALKWNKKGNYILS 296
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LDK-----KGDLNKEV 159
A DKT IWDA T K Q S + D ++ FA D + ++ V
Sbjct: 297 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + + A E I W+P
Sbjct: 356 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 217 NG 218
G
Sbjct: 415 TG 416
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + H K H V+SVA+S DG+ LASGSFD
Sbjct: 421 NPNSNIMLASASFDSTVRLWDVERGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFD 476
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 477 KCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 526
Score = 105 (42.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ + ++ + H+ + +
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD---LQAHSKEIYTIK 411
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 412 WSPTGPATSNPNSNIMLASASFDSTVRLWD 441
Score = 91 (37.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 470 LASGSFDKCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 524
Query: 195 AR 196
R
Sbjct: 525 LR 526
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 129 (50.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 37/108 (34%), Positives = 61/108 (56%)
Query: 42 NDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
N ++ + H V S+++S +G+ LAS D+ + ++ L G L KE+ RGHT S+
Sbjct: 13 NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL-ASGTLFKEL--RGHTDSITS 69
Query: 102 LCWHATNPD--LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIF 147
L A +PD L+++AS D +VR+WD R+ A GS + V ++
Sbjct: 70 L---AFSPDSGLIASASMDNSVRVWDIRSTCCNTP-ADGSSGELVGVY 113
Score = 100 (40.3 bits), Expect = 0.00050, P = 0.00050
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRI 192
LAS D+ + ++ L G L KE+ RGHT S+ L A +PD L+++AS D +VR+
Sbjct: 37 LASAGEDQRLKLWDL-ASGTLFKEL--RGHTDSITSL---AFSPDSGLIASASMDNSVRV 90
Query: 193 WDARTQKSQIIA--TKGENINITWAPNGNTIAV 223
WD R+ A + GE + + N ++V
Sbjct: 91 WDIRSTCCNTPADGSSGELVGVYTGQMSNVLSV 123
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGEN---INITWAPNGNTIAVGNKEDL 229
+R WD +K Q+++ +GE ++ + P+G + G ++ L
Sbjct: 213 IRFWDL--EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGEN---INITWAPNGNTIAVGNKEDL 229
+R WD +K Q+++ +GE ++ + P+G + G ++ L
Sbjct: 213 IRFWDL--EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGEN---INITWAPNGNTIAVGNKEDL 229
+R WD +K Q+++ +GE ++ + P+G + G ++ L
Sbjct: 213 IRFWDL--EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 132 (51.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 56/224 (25%), Positives = 104/224 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGEN---INITWAPNGNTIAVGNKEDL 229
+R WD +K Q+++ +GE ++ + P+G + G ++ L
Sbjct: 213 IRFWDL--EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 122 (48.0 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
+ H ++V SV+WS G LA+ S DKSV I+ + + V HT V ++ WH T
Sbjct: 100 EGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPT 159
Query: 108 NPDLLSTASGDKTVRIW 124
++L++AS D T++++
Sbjct: 160 K-EILASASYDNTIKMY 175
Score = 118 (46.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 20 PSGSQFHLVCKIDDYVKHFN-THN--DIKEYQAHGSK--VHSVAWSCDGRRLASGSFDKS 74
P G+ F C D ++ ++ T N K + G K + + WS G+ LAS SFD +
Sbjct: 24 PKGNVF-ASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCGQYLASASFDAT 82
Query: 75 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
AI++ G+ GH V + W + LL+T S DK+V IW+
Sbjct: 83 TAIWS-KSSGEFECNATLEGHENEVKSVSWSRSG-GLLATCSRDKSVWIWE 131
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LA+ S DKSV I+ + + V HT V ++ WH T ++L++AS D T++++
Sbjct: 117 LLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK-EILASASYDNTIKMY 175
Score = 70 (29.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 134 MLASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
+LAS S+D ++ ++A + D + HT ++ + + A L+S S D TV+I
Sbjct: 162 ILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERLVS-CSDDTTVKI 220
Query: 193 WDA 195
W A
Sbjct: 221 WRA 223
Score = 70 (29.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 84 GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
G L E +GH G + + WH ++ ++ DK +RIW T ++ +L+ G
Sbjct: 2 GRLILEHTLQGHKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDG 57
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 152 (58.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
S+ G +N+ + PN +A G+ + + F D+ K
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 57/224 (25%), Positives = 104/224 (46%)
Query: 29 CKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
C+++ + N N I H S V SV + + +GS S+ ++ L+ L
Sbjct: 43 CRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILR- 99
Query: 89 EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--------KSQIM------ 134
GH ++ L +H + +++ S D +++WD R + SQ +
Sbjct: 100 --TLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 135 -----LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D+T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSDRT 212
Query: 190 VRIWDARTQKSQIIAT-KGEN---INITWAPNGNTIAVGNKEDL 229
+R WD +K Q+++ +GE +I + P+G + G ++ L
Sbjct: 213 IRFWDL--EKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL 254
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVA 58
N+C + FH P + + SGSQ D +K ++ + Y+ H V +
Sbjct: 107 NICS-LDFH----PYGEFVASGSQ-------DTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 59 WSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 118
+S DG+ LAS + D +V ++ L G + E + GHTG V+ + +H N LL++ S D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTA-GKMMSE--FPGHTGPVNVVEFHP-NEYLLASGSSD 210
Query: 119 KTVRIWDARTQKSQIM 134
+T+R WD +K Q++
Sbjct: 211 RTIRFWDL--EKFQVV 224
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT AH ++V+ ++++ LA+GS DK+VA++ L + K L+ + H
Sbjct: 265 NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---FESHK 321
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I + D A D +L
Sbjct: 322 DEIFQVQWSPHNETILASSGTDRRLHVWDL----SKIGEEQSTED------AEDGPPELL 371
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 372 --FIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406
Score = 99 (39.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 335
Query: 221 IAVGNKED 228
I + D
Sbjct: 336 ILASSGTD 343
Score = 95 (38.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 24/110 (21%), Positives = 50/110 (45%)
Query: 33 DYVKHFNTHNDIKEYQ------AHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALDKKGD 85
DY KH + E Q H + + ++W+ + L S S D ++ ++ ++
Sbjct: 157 DYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK 216
Query: 86 LNKEV----VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
++ + ++ GHT V+ + WH + L + + D+ + IWD R +
Sbjct: 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266
Score = 89 (36.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 289 SEFILATGSADKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 345
Query: 190 VRIWD 194
+ +WD
Sbjct: 346 LHVWD 350
>RGD|2382 [details] [associations]
symbol:Coro1b "coronin, actin-binding protein, 1B" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:2382 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953
Pfam:PF08954 CTD:57175 KO:K13886 EMBL:AJ006064 IPI:IPI00209397
RefSeq:NP_062095.1 UniGene:Rn.2819 ProteinModelPortal:O89046
SMR:O89046 IntAct:O89046 MINT:MINT-2982709 STRING:O89046
PhosphoSite:O89046 PRIDE:O89046 GeneID:29474 KEGG:rno:29474
UCSC:RGD:2382 InParanoid:O89046 NextBio:609304 Genevestigator:O89046
GermOnline:ENSRNOG00000021828 Uniprot:O89046
Length = 484
Score = 118 (46.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCTACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 75 (31.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L+K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLNKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>UNIPROTKB|G3V940 [details] [associations]
symbol:Coro1b "Coronin" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:2382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OMA:QGERICR UniGene:Rn.2819 EMBL:CH473953 ProteinModelPortal:G3V940
Ensembl:ENSRNOT00000029829 Uniprot:G3V940
Length = 484
Score = 118 (46.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCTACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 75 (31.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L+K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLNKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 109 (43.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 41/136 (30%), Positives = 60/136 (44%)
Query: 3 CPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK-----VHSV 57
C +Q HT K Y L + + +V D N + + H K V +
Sbjct: 58 CRTLQGHTGKV--YSLDWTPERNRIVSASQD--GRLIVWNALTSQKTHAIKLPCAWVMTC 113
Query: 58 AWSCDGRRLASGSFDKSVAIFAL----DKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-L 112
A+S +G+ +A G D +IF+L DK G + + GH G V C + N D L
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVS-CCQYVPNEDAHL 172
Query: 113 STASGDKTVRIWDART 128
T+SGD+T +WD T
Sbjct: 173 ITSSGDQTCILWDVTT 188
Score = 82 (33.9 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 19/76 (25%), Positives = 33/76 (43%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGE--NIN-ITWAPNGN 219
GHT V + +NP+ + S D T R+WD R + G ++N + + P+G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 220 TIAVGNKEDLVTFIDV 235
G+ + D+
Sbjct: 262 RFGTGSDDGTCRLYDI 277
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 140 (54.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 60/209 (28%), Positives = 103/209 (49%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 70 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK-- 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKMM 182
Query: 200 SQIIATKGENINIT-WAPNGNTIAVGNKE 227
S+ G +N+ + PN +A G+ +
Sbjct: 183 SEFPGHTGP-VNVVEFHPNEYLLASGSSD 210
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 152 (58.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR- 122
R L S D +V + D+ G++ + ++ GHTG V + C A +LL + S D T+R
Sbjct: 421 RELDKESADINVRMLD-DRSGEVTRSLM--GHTGPVYR-CAFAPEMNLLLSCSEDSTIRL 476
Query: 123 ------------------IWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGH 164
+WD R S S+DK+ ++A D L V+ GH
Sbjct: 477 WSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR---VFVGH 533
Query: 165 TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--KGENINITWAPNGNTIA 222
VD + +H N + ++T S D+TVR+WD T +S + T KG ++ ++ G +A
Sbjct: 534 LSDVDCVQFHP-NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLA 592
Query: 223 VGNKEDLVTFIDV 235
G+ + + D+
Sbjct: 593 SGSVDHNIIIWDL 605
Score = 142 (55.0 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D ++ ++ T + + Y+ H V V ++ G S S+DK+ ++A D
Sbjct: 466 LSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQ 525
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSV 144
L V+ GH VD + +H N + ++T S D+TVR+WD T +S + L +G SV
Sbjct: 526 ALR---VFVGHLSDVDCVQFHP-NSNYVATGSSDRTVRLWDNMTGQS-VRLMTGH-KGSV 579
Query: 145 AIFALDKKGDLNKEVVYRGHTGSVDQ--LCWHATNPDLLSTASGDKTVRIWDARTQKSQI 202
+ A G Y +GSVD + W +N L++T + ++ +
Sbjct: 580 SSLAFSACGR------YLA-SGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTV 632
Query: 203 IATKGENINIT-W 214
+A G + N+T W
Sbjct: 633 LAAAGLDNNLTLW 645
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 149 (57.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 53/192 (27%), Positives = 88/192 (45%)
Query: 50 HGSKVHSVAW-SCDGRR--LASGSFDKSVAIFALD-KKGDLNKEVVYRGHTGSVDQLCWH 105
H V VAW DG L + S D++V ++ + ++ + RGH GSVD +
Sbjct: 139 HADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSVDTIAVD 198
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV-YRGH 164
T S S DK ++IW A + + + + + ++ G ++ GH
Sbjct: 199 PTRTKFCS-GSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQ--KTEQMGLTRTPLMTLSGH 255
Query: 165 TGSVDQLCWHATNPDLLSTASGDKTVRIWDART--QKSQIIATKGENINITWAPNGNTIA 222
+V + W + D L +AS D T+R+WDA T QKS + +K N I+++P +A
Sbjct: 256 NEAVSSVLW--MDADELCSASWDHTIRLWDAETGGQKSTLSGSKVFNC-ISYSPLCRRLA 312
Query: 223 VGNKEDLVTFID 234
G+ + V D
Sbjct: 313 SGSTDRHVRLWD 324
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 39 NTHNDIKEYQAHGSKVHSVAWSCDGRR-LASGSFDKSVAIFAL-DKKGDLNKEVVYRGHT 96
NT A+ ++V+ ++++ + LASGS DK+VA++ L + K L+ + H
Sbjct: 261 NTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHS---FESHK 317
Query: 97 GSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN 156
+ Q+ W N +L+++ D+ + +WD S+I D A D +L
Sbjct: 318 DEIFQVQWSPHNETILASSGTDRRLNVWDL----SKIGEEQSPED------AEDGPPELL 367
Query: 157 KEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
++ GHT + W+ P ++ + S D +++W
Sbjct: 368 --FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
Score = 103 (41.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 33 DYVKHFNTHNDIKE------YQAHGSKVHSVAWS--CDGRRLASGSFDKSVAIF---ALD 81
DY KH + + E + H + + ++W+ G L S S D ++ ++ A+
Sbjct: 153 DYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGY-LLSASDDHTICLWDISAVP 211
Query: 82 KKGDL-NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS 131
K+G + + ++ GHT V+ + WH + L + + D+ + IWD R+ +
Sbjct: 212 KEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Score = 90 (36.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 131 SQIMLASGSFDKSVAIFAL-DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
S+ +LASGS DK+VA++ L + K L+ + H + Q+ W N +L+++ D+
Sbjct: 285 SEFILASGSPDKTVALWDLRNLKLKLHS---FESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
Score = 89 (36.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT---KGENINITWAPNGNT 220
+T V+ L ++ + +L++ S DKTV +WD R K ++ + K E + W+P+ T
Sbjct: 272 YTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 221 IAVGNKED 228
I + D
Sbjct: 332 ILASSGTD 339
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 102 (41.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 48 QAHGSKVHSVAWSCD-GRRLASGSFDKSVAIFALD---KKGDL-NKEVVYRGHTGSVDQL 102
+ H + + ++W+ + L S S D +V ++ ++ K+G + + + V+ GH+ V+ +
Sbjct: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDV 232
Query: 103 CWHATNPDLLSTASGDKTVRIWDART 128
WH + L + + D+ + +WD R+
Sbjct: 233 AWHLLHESLFGSVADDQKLMMWDTRS 258
Score = 91 (37.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII---ATKGENINIT-WAPNGN 219
HT V+ L ++ + +L+T S DKTV +WD R K ++ + K E + W+P+
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNE 330
Query: 220 TIAVGNKED 228
TI + D
Sbjct: 331 TILASSGTD 339
Score = 83 (34.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 131 SQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC-WHATNPDLLSTASGDKT 189
S+ +LA+GS DK+VA++ D + K + H + Q+ W N +L+++ D+
Sbjct: 284 SEFILATGSADKTVALW--DLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRR 341
Query: 190 VRIWD 194
+ +WD
Sbjct: 342 LNVWD 346
Score = 75 (31.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD--ARTQKSQIMLASG 138
D G+ N ++ RGH L W++ L +AS D TV +WD A ++ +I+ A
Sbjct: 161 DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA 220
Query: 139 SFDKSVAI 146
F A+
Sbjct: 221 VFTGHSAV 228
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 140 (54.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 40/115 (34%), Positives = 62/115 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + TH K H V+SVA+S DGR LASGSFD
Sbjct: 463 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTK----HQEPVYSVAFSPDGRYLASGSFD 518
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G+L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 519 KCVHIWNT-QSGNLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 568
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 53/182 (29%), Positives = 83/182 (45%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 283 VTSLDWNTNGTLLATGSYDGFARIWTED--GNLASTLGQ--HKGPIFALKWNRKGNYILS 338
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD------KSVAIFALDK-----KGDLNKEV 159
A DKT IWDA T K Q S + D + A + D + ++ V
Sbjct: 339 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDRPV 397
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + + + A E I W+P
Sbjct: 398 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Query: 217 NG 218
G
Sbjct: 457 TG 458
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 46/151 (30%), Positives = 71/151 (47%)
Query: 80 LDKKGDL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLAS 137
+D + D+ +K V RGH V W+ + DLL++ SGD T RIW+ ++
Sbjct: 206 IDGEVDIPSSKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNEN------SN 258
Query: 138 GSFDKSVAIFALDKKG-DL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
G + V + + G D+ NK+V S+D W+ TN LL+T S D RIW
Sbjct: 259 GGSTQLVLRHCIREGGHDVPSNKDVT------SLD---WN-TNGTLLATGSYDGFARIW- 307
Query: 195 ARTQKSQIIATKGEN----INITWAPNGNTI 221
T+ + +T G++ + W GN I
Sbjct: 308 --TEDGNLASTLGQHKGPIFALKWNRKGNYI 336
Score = 104 (41.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ ++ ++ + H + +
Sbjct: 397 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHD---LQAHNKEIYTIK 453
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 454 WSPTGPATSNPNSNIMLASASFDSTVRLWD 483
Score = 92 (37.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G+L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 512 LASGSFDKCVHIWNT-QSGNLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 566
Query: 195 AR 196
R
Sbjct: 567 LR 568
Score = 76 (31.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+++ H + V W + AS S D + + L G ++GHT V+ + W
Sbjct: 357 QQFPFHSAPALDVDWQ-NNMTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKW 412
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ 129
+ LL++ S D T++IW + +
Sbjct: 413 DPSGM-LLASCSDDMTLKIWSMKQE 436
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
Y++H + + S G+ + +GS D S +++L+K+ L ++Y GHT V+ + +H
Sbjct: 535 YRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHAL---IIYAGHTQDVECVAFHP 591
Query: 107 TNPDLLSTASGDKTVRIW------------DARTQKSQI-------MLASGSFDKSVAIF 147
N + ++T S D +VR+W D R +Q+ MLA+ + V IF
Sbjct: 592 -NGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIF 650
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
L L + + H+ S+ L W N L +TA D T+R+WD +
Sbjct: 651 DLAAGAQLAE---LKDHSASISSLSWSTHNRHL-ATACSDGTLRLWDIK 695
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/164 (26%), Positives = 80/164 (48%)
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART-----------------QKSQI-- 133
RGHT V + + A P L+ + S D T+R W A +S +
Sbjct: 494 RGHTKGVTDVRFSAHYP-LMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+ +GS D S +++L+K+ L ++Y GHT V+ + +H N + ++T S D +VR+W
Sbjct: 553 YVVTGSKDLSARLWSLEKEHAL---IIYAGHTQDVECVAFHP-NGNYIATGSADHSVRLW 608
Query: 194 DARTQK-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDV 235
A + K ++ A + + + ++P+G +A +E V D+
Sbjct: 609 CATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDL 652
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 148 (57.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 51/171 (29%), Positives = 82/171 (47%)
Query: 13 SPEYKLLPSGSQFHLVCKIDD----YVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLAS 68
SP+ KL+ +GS V D V+ ++ N+ H V+SVA+S +G ++AS
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE--NGNGHEDSVYSVAFSNNGEQIAS 404
Query: 69 GSFDKSVAIFALDKKGDLNK--EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126
GS D++V ++ L+ K D EV Y GH V +C N +LS S D+ V WD
Sbjct: 405 GSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIFWDQ 463
Query: 127 RTQKSQIMLASGSFDKSVAI-FALDKKGDLNKEVVYRGHTGSVDQLCWHAT 176
+ +ML G + +++ +L+ KG E ++ +G W T
Sbjct: 464 ASGNPLLML-QGHRNSVISVAVSLNSKGT---EGIFATGSGDCKARIWKWT 510
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 27 LVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86
LV K+ D + N + D + + SV +S DG+ LA+G+ DK + I+ L K +
Sbjct: 233 LVAKLID--ESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII 290
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
+ RGH + L + D L + SGD++VRIWD RT + + L S + V
Sbjct: 291 K---ILRGHEQDIYSLDFFPDG-DRLVSGSGDRSVRIWDLRTSQCSLTL---SIEDGVTT 343
Query: 147 FALDKKGDL 155
A+ G L
Sbjct: 344 VAVSPDGKL 352
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N D +TASGD +R +LA+G+ DK + I+ L K + + RGH
Sbjct: 245 NKDDNTTASGDLYIR--SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK---ILRGHEQD 299
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENIN-ITWAPNGNTIAVGNK 226
+ L + D L + SGD++VRIWD RT + + + + + + +P+G IA G+
Sbjct: 300 IYSLDFFPDG-DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSL 358
Query: 227 EDLVTFID 234
+ V D
Sbjct: 359 DRTVRVWD 366
Score = 118 (46.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/119 (35%), Positives = 64/119 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ KLL +G++ L+ +I D +T IK + H ++S+ + DG RL SGS D
Sbjct: 264 SPDGKLLATGAEDKLI-RIWD----LSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSV-DQLCWHATNPD--LLSTASGDKTVRIWDART 128
+SV I+ DL T S+ D + A +PD L++ S D+TVR+WD+ T
Sbjct: 319 RSVRIW------DLRTSQC--SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Score = 75 (31.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 134 MLASGSFDKSVAI------FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187
++A+GS D++V + F +++ N+ GH SV + + + N + +++ S D
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENG--NGHEDSVYSVAF-SNNGEQIASGSLD 408
Query: 188 KTVRIW--DARTQKSQI-----IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
+TV++W + ++ K I K +++ P+ I G+K+ V F D P
Sbjct: 409 RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP 468
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 148 (57.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 51/171 (29%), Positives = 82/171 (47%)
Query: 13 SPEYKLLPSGSQFHLVCKIDD----YVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLAS 68
SP+ KL+ +GS V D V+ ++ N+ H V+SVA+S +G ++AS
Sbjct: 347 SPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE--NGNGHEDSVYSVAFSNNGEQIAS 404
Query: 69 GSFDKSVAIFALDKKGDLNK--EVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 126
GS D++V ++ L+ K D EV Y GH V +C N +LS S D+ V WD
Sbjct: 405 GSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILS-GSKDRGVIFWDQ 463
Query: 127 RTQKSQIMLASGSFDKSVAI-FALDKKGDLNKEVVYRGHTGSVDQLCWHAT 176
+ +ML G + +++ +L+ KG E ++ +G W T
Sbjct: 464 ASGNPLLML-QGHRNSVISVAVSLNSKGT---EGIFATGSGDCKARIWKWT 510
Score = 132 (51.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 27 LVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86
LV K+ D + N + D + + SV +S DG+ LA+G+ DK + I+ L K +
Sbjct: 233 LVAKLID--ESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRII 290
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
+ RGH + L + D L + SGD++VRIWD RT + + L S + V
Sbjct: 291 K---ILRGHEQDIYSLDFFPDG-DRLVSGSGDRSVRIWDLRTSQCSLTL---SIEDGVTT 343
Query: 147 FALDKKGDL 155
A+ G L
Sbjct: 344 VAVSPDGKL 352
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS 167
N D +TASGD +R +LA+G+ DK + I+ L K + + RGH
Sbjct: 245 NKDDNTTASGDLYIR--SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK---ILRGHEQD 299
Query: 168 VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENIN-ITWAPNGNTIAVGNK 226
+ L + D L + SGD++VRIWD RT + + + + + + +P+G IA G+
Sbjct: 300 IYSLDFFPDG-DRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSL 358
Query: 227 EDLVTFID 234
+ V D
Sbjct: 359 DRTVRVWD 366
Score = 118 (46.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 42/119 (35%), Positives = 64/119 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ KLL +G++ L+ +I D +T IK + H ++S+ + DG RL SGS D
Sbjct: 264 SPDGKLLATGAEDKLI-RIWD----LSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGD 318
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSV-DQLCWHATNPD--LLSTASGDKTVRIWDART 128
+SV I+ DL T S+ D + A +PD L++ S D+TVR+WD+ T
Sbjct: 319 RSVRIW------DLRTSQC--SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT 369
Score = 75 (31.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 134 MLASGSFDKSVAI------FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGD 187
++A+GS D++V + F +++ N+ GH SV + + + N + +++ S D
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENG--NGHEDSVYSVAF-SNNGEQIASGSLD 408
Query: 188 KTVRIW--DARTQKSQI-----IATKGENINITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
+TV++W + ++ K I K +++ P+ I G+K+ V F D P
Sbjct: 409 RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP 468
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/115 (33%), Positives = 62/115 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + TH K H V+SVA+S DG+ LASGSFD
Sbjct: 471 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTK----HQEPVYSVAFSPDGKYLASGSFD 526
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G+L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 527 KCVHIWNT-QSGNLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 576
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 44/142 (30%), Positives = 66/142 (46%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
+K V RGH V W+ + DLL++ SGD T RIW+ ++G + V
Sbjct: 223 SKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNEN------SNGGSTQLVLR 275
Query: 147 FALDKKG-DL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII 203
+ + G D+ NK+V S+D W+ TN LL+T S D RIW T+ +
Sbjct: 276 HCIREGGHDVPSNKDVT------SLD---WN-TNGTLLATGSYDGFARIW---TEDGNLA 322
Query: 204 ATKGEN----INITWAPNGNTI 221
+T G++ + W GN I
Sbjct: 323 STLGQHKGPIFALKWNRKGNYI 344
Score = 104 (41.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ ++ ++ + H + +
Sbjct: 405 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHD---LQAHNKEIYTIK 461
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 462 WSPTGPATSNPNSNIMLASASFDSTVRLWD 491
Score = 92 (37.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G+L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 520 LASGSFDKCVHIWNT-QSGNLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 574
Query: 195 AR 196
R
Sbjct: 575 LR 576
Score = 76 (31.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+++ H + V W + AS S D + + L G ++GHT V+ + W
Sbjct: 365 QQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKW 420
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ 129
+ LL++ S D T++IW + +
Sbjct: 421 DPSGM-LLASCSDDMTLKIWSMKQE 444
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 150 (57.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 56/199 (28%), Positives = 97/199 (48%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA 76
+LL +GS+ +V D N +++++ H VH+V ++ D + SG+ D +V
Sbjct: 93 QLLVAGSEDGVVQLFD-----INGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVK 147
Query: 77 IFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
++ + +KE++ ++ H+ V C NPDL T S D TV+I+DART K+ + +
Sbjct: 148 LWDIPN----SKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCV 203
Query: 136 ASGSFDKSVAIFA----LDKKG-------DLNKE----VVYRGHTGSVDQLCWHATNPDL 180
G +SV +F L G D+ K V + H +V LC ++ L
Sbjct: 204 EHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRL 263
Query: 181 LSTASGDKTVRIWDARTQK 199
LS S D+ V+++ + K
Sbjct: 264 LS-GSLDRKVKVYSTTSYK 281
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ DG LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 242 VTSLDWNSDGTLLATGSYDGFARIWTED--GNLASTLGQ--HKGPIFALKWNKKGNYILS 297
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LDK-----KGDLNKEV 159
A DKT IWDA T K Q S + D ++ FA D + ++ V
Sbjct: 298 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 356
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + T + A E I W+P
Sbjct: 357 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 217 NG 218
G
Sbjct: 416 TG 417
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + H K H V+SVA+S DG+ LASGSFD
Sbjct: 422 NPNSSIMLASASFDSTVRLWDVERGVCLHTLTK----HQEPVYSVAFSPDGKYLASGSFD 477
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 478 KCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 527
Score = 104 (41.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ K+ ++ + H+ + +
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM-KQDTCVHDL--QAHSKEIYTIK 412
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 413 WSPTGPATSNPNSSIMLASASFDSTVRLWD 442
Score = 91 (37.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L YRG TG + ++CW+A D + ++ D +V + D
Sbjct: 471 LASGSFDKCVHIWNT-QSGSLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 525
Query: 195 AR 196
R
Sbjct: 526 LR 527
>UNIPROTKB|Q7RXM4 [details] [associations]
symbol:NCU00202 "Coronin" species:367110 "Neurospora crassa
OR74A" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 GO:GO:0005826 GO:GO:0051666
GO:GO:0034316 GO:GO:0005885 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B EMBL:AABX02000001
RefSeq:XP_956587.1 UniGene:Ncr.4234 ProteinModelPortal:Q7RXM4
STRING:Q7RXM4 EnsemblFungi:EFNCRT00000000015 GeneID:3872734
KEGG:ncr:NCU00202 Uniprot:Q7RXM4
Length = 683
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 49/189 (25%), Positives = 91/189 (48%)
Query: 76 AIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
A+ L+++G L ++ ++RGHT +V W+ N L+++AS D V +W +
Sbjct: 137 AVIPLNERGKLPDQIPLFRGHTAAVLDTDWNPFNDRLIASASDDGKVFVWQVPENFTLYT 196
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
A D S L+K GHT V + ++ ++L+++SGD TV+ WD
Sbjct: 197 DAEEPADVS----------PLSK---LSGHTRKVGHVLFNPAAENILASSSGDLTVKFWD 243
Query: 195 ARTQKSQIIATKGENI--NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGH- 251
T ++ I A K +I +++W+ NG + +++ + DV + E +GH
Sbjct: 244 VETGQAPI-AIKHPDIVQSLSWSANGTMLVTTSRDKKLRVWDVRQQSAVHEY----QGHE 298
Query: 252 -LMETRSLW 259
+R++W
Sbjct: 299 GAKNSRAVW 307
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 99 (39.9 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 46 EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105
E + H + V S +GR +AS S D + I+ + ++ V GH V L W
Sbjct: 175 ELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLV---GHMAGVSCLAW- 230
Query: 106 ATNPD--LLSTASGDKTVRIWDART 128
+PD L+T S DK +R+WD T
Sbjct: 231 --SPDSGTLATGSDDKAIRLWDRIT 253
Score = 97 (39.2 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LASGS+D++V ++ + + G L + + S C T L+ + S D +RIW
Sbjct: 320 ILASGSYDEAVFLWDV-RAGRLMRSLPAHSDPVSGIDFCRDGT---LVVSCSTDGLIRIW 375
Query: 194 DARTQKSQIIATKGEN---INITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRG 250
D T + +N N+ ++PNG I N + + D + P + T +G
Sbjct: 376 DTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWDYIAH--PSKVKKTYQG 433
Query: 251 HLMETRSLWG 260
H+ S+ G
Sbjct: 434 HVNTGFSIGG 443
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 149 (57.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 54/182 (29%), Positives = 85/182 (46%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ +G LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 228 VTSLDWNSEGTLLATGSYDGFARIWTKD--GNLASTLGQ--HKGPIFALKWNKKGNFILS 283
Query: 114 TASGDKTVRIWDARTQKSQIML---ASGSFD---KSVAIFA---LD------KKGDLNKE 158
A DKT IWDA T +++ + ++ + D +S FA D K G
Sbjct: 284 -AGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPI 342
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W T +LL++ S D T++IW + + A E I W+P
Sbjct: 343 KTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 217 NG 218
G
Sbjct: 402 TG 403
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P L+ + + F ++ D + H K H V+SVA+S DGR LASGSFD
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTK----HQEPVYSVAFSPDGRYLASGSFD 463
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 464 KCVHIWNT-QTGALVHS--YRG-TGGIFEVCWNAAG-DKVGASASDGSVCVLDLR 513
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 42/136 (30%), Positives = 62/136 (45%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
NK VV RGH V W+ + DLL++ SGD T RIW+ ++ S SGS + +
Sbjct: 160 NKAVVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNL-SENS----TSGS--TQLVL 211
Query: 147 FALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT- 205
++G ++V S+D W++ LL+T S D RIW + +
Sbjct: 212 RHCIREG--GQDVPSNKDVTSLD---WNSEGT-LLATGSYDGFARIWTKDGNLASTLGQH 265
Query: 206 KGENINITWAPNGNTI 221
KG + W GN I
Sbjct: 266 KGPIFALKWNKKGNFI 281
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 37/148 (25%), Positives = 75/148 (50%)
Query: 48 QAHGSKVHSVAWS--CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105
+AH S+V+ ++++ C+ +A+GS DK+VA++ + G+ ++ HT V Q+ +
Sbjct: 265 EAHNSEVNCLSFNPFCEFL-VATGSTDKTVALWDMRNLGNRLHSLI--SHTDEVFQVQFS 321
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHT 165
N +L++ D+ V +WD S+I + D A D +L ++ GHT
Sbjct: 322 PHNETVLASCGSDRRVNVWDL----SRIGEEQNNED------AADGPPELL--FIHGGHT 369
Query: 166 GSVDQLCWHATNPDLLSTASGDKTVRIW 193
+ W+ +P +++ + D ++IW
Sbjct: 370 SKISDFSWNPNDPWSIASVAEDNILQIW 397
Score = 105 (42.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 24/85 (28%), Positives = 42/85 (49%)
Query: 50 HGSKVHSVAWSC--DGRRLASGSFDKSVAIFALD--KKGDLNKEV--VYRGHTGSVDQLC 103
H + + ++W+ +G L S S D+S+ ++ + K D + +Y GHT V+ +
Sbjct: 173 HKKEGYGISWNPRKEGH-LLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVA 231
Query: 104 WHATNPDLLSTASGDKTVRIWDART 128
WH + + DK + IWD RT
Sbjct: 232 WHYIHDTFFGSVGDDKKLMIWDTRT 256
Score = 86 (35.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
+ ++A+GS DK+VA++ + G+ ++ HT V Q+ + N +L++ D+ V
Sbjct: 281 EFLVATGSTDKTVALWDMRNLGNRLHSLI--SHTDEVFQVQFSPHNETVLASCGSDRRVN 338
Query: 192 IWD 194
+WD
Sbjct: 339 VWD 341
>MGI|MGI:1345963 [details] [associations]
symbol:Coro1b "coronin, actin binding protein 1B"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345963 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
OMA:QGERICR EMBL:AF143956 EMBL:AK008947 EMBL:AK149639
IPI:IPI00124819 RefSeq:NP_035908.1 UniGene:Mm.276859
ProteinModelPortal:Q9WUM3 SMR:Q9WUM3 IntAct:Q9WUM3 STRING:Q9WUM3
PhosphoSite:Q9WUM3 PaxDb:Q9WUM3 PRIDE:Q9WUM3
Ensembl:ENSMUST00000008893 GeneID:23789 KEGG:mmu:23789
InParanoid:Q9WUM3 ChiTaRS:CORO1B NextBio:303387 Bgee:Q9WUM3
CleanEx:MM_CORO1B Genevestigator:Q9WUM3
GermOnline:ENSMUSG00000024835 Uniprot:Q9WUM3
Length = 484
Score = 116 (45.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 75 (31.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L+K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLNKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>UNIPROTKB|Q9BR76 [details] [associations]
symbol:CORO1B "Coronin-1B" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
EMBL:CH471076 GO:GO:0051015 HOGENOM:HOG000166356 HOVERGEN:HBG059978
OrthoDB:EOG4RNB8C InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:AK315399 EMBL:BC006449 IPI:IPI00007058 RefSeq:NP_001018080.1
RefSeq:NP_065174.1 UniGene:Hs.6191 ProteinModelPortal:Q9BR76
SMR:Q9BR76 IntAct:Q9BR76 MINT:MINT-5005556 STRING:Q9BR76
PhosphoSite:Q9BR76 DMDM:21263481 PaxDb:Q9BR76 PeptideAtlas:Q9BR76
PRIDE:Q9BR76 DNASU:57175 Ensembl:ENST00000341356
Ensembl:ENST00000393893 GeneID:57175 KEGG:hsa:57175 UCSC:uc001olk.1
CTD:57175 GeneCards:GC11M067205 HGNC:HGNC:2253 HPA:CAB017616
MIM:609849 neXtProt:NX_Q9BR76 PharmGKB:PA26769 InParanoid:Q9BR76
KO:K13886 OMA:QGERICR PhylomeDB:Q9BR76 GenomeRNAi:57175
NextBio:63197 ArrayExpress:Q9BR76 Bgee:Q9BR76 CleanEx:HS_CORO1B
Genevestigator:Q9BR76 GermOnline:ENSG00000172725 Uniprot:Q9BR76
Length = 489
Score = 117 (46.2 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 74 (31.1 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/195 (27%), Positives = 92/195 (47%)
Query: 50 HGSKVHSVAW-SCDGRR--LASGSFDKSVAIFALD-KKGDLNKEVVYRGHTGSVDQLCWH 105
H V VAW DG L + S D+++ ++ + ++ L RGH GSVD +
Sbjct: 139 HTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSVDTI--- 195
Query: 106 ATNPDLLSTASG--DKTVRIWDA-RTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV-Y 161
AT+P SG DK ++IW A T++ + S + ++ G ++
Sbjct: 196 ATDPTRTKFCSGSWDKMLKIWSAVATEEEEEEEEPPSRPRKKQ--KTEQLGLTRTPLMTL 253
Query: 162 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ--KSQIIATKGENINITWAPNGN 219
GH +V + W + + + +AS D T+R+WDA T K+ + +K N +I+++P
Sbjct: 254 SGHNEAVSSVLW--LDSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFN-HISYSPLCR 310
Query: 220 TIAVGNKEDLVTFID 234
+A G+ + V D
Sbjct: 311 RLASGSTDRHVRLWD 325
Score = 105 (42.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 29/103 (28%), Positives = 53/103 (51%)
Query: 33 DYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92
+YV+ F T +E H + SV D + +GS+DK+ I++L+ K +
Sbjct: 84 EYVERF-TAPQPEECMMHDDWISSV--EADSEWILTGSYDKTAKIWSLEGKAVMT----V 136
Query: 93 RGHTGSVDQLCWHATN--PDLLSTASGDKTVRIWDARTQKSQI 133
GHT V + W + LL TAS D+T+ +W+ ++++++
Sbjct: 137 AGHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKL 179
Score = 85 (35.0 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 135 LASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
LASGS D+ V ++ K G L + H+G V + W ++ L + S D V++W
Sbjct: 312 LASGSTDRHVRLWDPRSKDGSLVL-LSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLW 370
Query: 194 DARTQKS---QIIATKGENINITWAPNGNTIAVGNKEDLVTF 232
D R+ K+ + A + + + + W + ++ G L T+
Sbjct: 371 DTRSCKAPLYDVSAHEDKVLCVDWTDSRLMLSGGADNKLYTY 412
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 144 (55.7 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 44 IKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
IK ++ H +V+SV W+ + +GS+D+S+ I+ + + D + + +R H +
Sbjct: 97 IKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIW--NPRMDRSLKT-FREHRYCIYSA 153
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYR 162
W N L ++ SGD+T++IWD+R +S + + D + +K D KEVV
Sbjct: 154 IWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKA--HDHEILTCDWNKYND--KEVV-- 207
Query: 163 GHTGSVDQLC--WHATNPDLLST 183
TGSVD+ W PD +T
Sbjct: 208 --TGSVDKTIRIWDIRYPDRPTT 228
Score = 122 (48.0 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLST 183
W+ T+ + I +GS+D+S+ I+ + + D + + +R H + W N L ++
Sbjct: 112 WNLVTKDTFI---TGSWDQSIKIW--NPRMDRSLKT-FREHRYCIYSAIWSPRNAHLFAS 165
Query: 184 ASGDKTVRIWDARTQKS--QIIATKGENINITWAP-NGNTIAVGNKEDLVTFIDVVKSLP 240
SGD+T++IWD+R +S I A E + W N + G+ + + D+ P
Sbjct: 166 VSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDI--RYP 223
Query: 241 PRERTLTSRGHLMETRSL 258
R T+ RGH R +
Sbjct: 224 DRPTTIL-RGHTYAVRRI 240
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 106 (42.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 41/128 (32%), Positives = 59/128 (46%)
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSF-- 140
KGD KE GHTG+V L H + + + T S DKT ++WD +T+K + LA +
Sbjct: 220 KGDRFKEAHLIGHTGTVWAL--HLDD-ERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPI 276
Query: 141 ---DKSVAIFA---LDKK---GDLNKE-----VVYRGHTGSVDQLCWHATNPDLLSTASG 186
D + I A LD DL K + R H + D C ++S S
Sbjct: 277 QCLDVNNNIMATGSLDNSIRIWDLEKGKSKGILTTRAH--NFDVFCLQQIGDQIIS-GSS 333
Query: 187 DKTVRIWD 194
D TV++W+
Sbjct: 334 DSTVKVWN 341
Score = 105 (42.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+L SG D+ V ++ L+ + + GH + L + N ++L T S D TVR+W
Sbjct: 431 ILMSGGSDRVVRVWDLNTSQPIQ---ILSGHNEGIRALQF---NGNVLVTGSDDTTVRVW 484
Query: 194 DARTQKSQIIATKGENINITWAP-NGNTIAVGNKEDLV 230
D R++ S I +G N ++ +G T+ G+ + V
Sbjct: 485 DLRSKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSV 522
Score = 90 (36.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 48 QAHGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105
+AH W+ D R+ +GSFDK+ ++ K GH + C
Sbjct: 226 EAHLIGHTGTVWALHLDDERVYTGSFDKTAKVWDTKTK---KCRFTLAGHYYPIQ--CLD 280
Query: 106 ATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
N ++++T S D ++RIWD KS+ +L + + + V F L + GD
Sbjct: 281 VNN-NIMATGSLDNSIRIWDLEKGKSKGILTTRAHNFDV--FCLQQIGD 326
Score = 87 (35.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 179 DLLSTASGDKTVRIWDART-QKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237
++L + D+ VR+WD T Q QI++ E I NGN + G+ + V D+ +
Sbjct: 430 NILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQF-NGNVLVTGSDDTTVRVWDL-R 487
Query: 238 SLPPRERTLTSRGHLMETRSL-W-GT 261
S TL RGH R L W GT
Sbjct: 488 SKNSNISTL--RGHNGSVRCLQWDGT 511
Score = 76 (31.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 66 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
+A+GS D S+ I+ L+K G + R H + D C ++S S D TV++W+
Sbjct: 286 MATGSLDNSIRIWDLEK-GKSKGILTTRAH--NFDVFCLQQIGDQIIS-GSSDSTVKVWN 341
>UNIPROTKB|F1RUX1 [details] [associations]
symbol:CORO1B "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OMA:QGERICR EMBL:CU633429 Ensembl:ENSSSCT00000014123 Uniprot:F1RUX1
Length = 498
Score = 116 (45.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 96 VIASGSEDCTVMVWQIPEHGLTSPLTEPVVVLEGHTKRVGIITWHPTARNVLLSAGCDNV 155
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I NI+W NG+ K+ V ID + ER
Sbjct: 156 VLIWNVGTAEELYRLDSLHPDLIYNISWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREK 215
Query: 247 TSRG 250
G
Sbjct: 216 AHEG 219
Score = 74 (31.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 61 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 109
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + TH K H V+S+A+S DG+ LASGSFD
Sbjct: 418 NPNSSIMLASASFDSTVRLWDVEQGVCTHTLTK----HQEPVYSIAFSPDGKYLASGSFD 473
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L Y+G TG + ++CW+A D + ++ D +V + D R
Sbjct: 474 KCVHIWNT-QSGSLVHS--YQG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 523
Score = 105 (42.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
+K +Q H ++V+++ W G LAS S D ++ I+++ + ++ + H+ + +
Sbjct: 352 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD---LQAHSKEIYTIK 408
Query: 104 WHAT-----NPD---LLSTASGDKTVRIWD 125
W T NP+ +L++AS D TVR+WD
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L Y+G TG + ++CW+A D + ++ D +V + D
Sbjct: 467 LASGSFDKCVHIWNT-QSGSLVHS--YQG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 521
Query: 195 AR 196
R
Sbjct: 522 LR 523
Score = 73 (30.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+++ H + V W + AS D + + L DL + ++GHT V+ + W
Sbjct: 312 QQFPFHSAPALDVDWQ-NNTTFASCGTDMCIHVCRLGC--DLPVKT-FQGHTNEVNAIKW 367
Query: 105 HATNPDLLSTASGDKTVRIWDAR 127
+ LL++ S D T++IW +
Sbjct: 368 DPSGM-LLASCSDDMTLKIWSMK 389
>FB|FBgn0260049 [details] [associations]
symbol:flr "flare" species:7227 "Drosophila melanogaster"
[GO:0030042 "actin filament depolymerization" evidence=ISS;IMP]
[GO:0003779 "actin binding" evidence=ISS] [GO:0008154 "actin
polymerization or depolymerization" evidence=ISS] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0035317 "imaginal
disc-derived wing hair organization" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0003779
GO:GO:0006911 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 GO:GO:0030042
GO:GO:0045214 GeneTree:ENSGT00390000009416 GO:GO:0001736
GO:GO:0035317 GO:GO:0030834 CTD:797829 OMA:INGIAAW EMBL:AY061340
RefSeq:NP_648642.1 RefSeq:NP_729891.1 UniGene:Dm.1492
ProteinModelPortal:Q9VU68 SMR:Q9VU68 DIP:DIP-18795N IntAct:Q9VU68
MINT:MINT-318098 STRING:Q9VU68 PaxDb:Q9VU68 PRIDE:Q9VU68
EnsemblMetazoa:FBtr0075845 GeneID:39505 KEGG:dme:Dmel_CG10724
UCSC:CG10724-RA FlyBase:FBgn0260049 OrthoDB:EOG4HQC0B
PhylomeDB:Q9VU68 GenomeRNAi:39505 NextBio:813989 Bgee:Q9VU68
GermOnline:CG10724 Uniprot:Q9VU68
Length = 608
Score = 118 (46.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
Q H V +V +S DG+ AS FD V ++ +L E H G V L W
Sbjct: 192 QDHSRFVQAVRYSPDGKFFASAGFDGKVFLYD-GTSSELVGEFGSPAHKGGVYALAWKPD 250
Query: 108 NPDLLSTASGDKTVRIW--DARTQKSQIMLASGSFDKSVA 145
+ LL T SGDKT R+W ++R S+ ++ + D+ V+
Sbjct: 251 STQLL-TCSGDKTCRLWTVESRELVSEFVMGTTVDDQQVS 289
Score = 74 (31.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 142 KSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG--DKTVRIWD-ART 197
+ V ++++++ K NKE + H+ V+ + W +P+ L ASG D T+ IW A
Sbjct: 511 RKVVLYSVEEYKPAHNKEWGF--HSARVNTVAW---SPNSLLVASGSLDTTIIIWSVANP 565
Query: 198 QKSQIIATKGENINIT---WAPNGNTIAVG 224
K II IT W N I+ G
Sbjct: 566 AKHTIIKNAHPQSQITRLVWLDNNTVISTG 595
Score = 70 (29.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 31/133 (23%), Positives = 54/133 (40%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL--LSTASGDKTVRI 192
+A G D+ + I+ L KG + + V H G+V + + +PDL L + V +
Sbjct: 461 VAVGGDDQKLHIYTL--KGGVLEPKVELDHLGAVTDVSY---SPDLKYLVACDAHRKVVL 515
Query: 193 WDARTQKSQIIATKG---ENIN-ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTS 248
+ K G +N + W+PN +A G+ + + V P + T+
Sbjct: 516 YSVEEYKPAHNKEWGFHSARVNTVAWSPNSLLVASGSLDTTIIIWSVAN---PAKHTIIK 572
Query: 249 RGHLME--TRSLW 259
H TR +W
Sbjct: 573 NAHPQSQITRLVW 585
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/220 (30%), Positives = 111/220 (50%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V I+A+ K N + GHT +V +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKP---NCIMSLTGHTSAVGCI 69
Query: 103 CWHATNPDLLS-TASGDKTVRIWDA------RT---QKSQIM----------LASGSFDK 142
++++ +++ + SG ++R+WD RT K+ I LASGS D
Sbjct: 70 QFNSSEERVVAGSLSG--SLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDS 127
Query: 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK- 199
++ ++ + +KG + + Y+GHT +V L A +PD L++AS D TV++WD K
Sbjct: 128 NIKLWDVRRKGCVFR---YKGHTQAVRCL---AFSPDGKWLASASDDSTVKLWDLIAGKM 181
Query: 200 -SQIIA-TKGENINITWAPNGNTIAVGNKEDLVTFIDVVK 237
++ + T N+ + + PN +A G+ + V D+ K
Sbjct: 182 ITEFTSHTSAVNV-VQFHPNEYLLASGSADRTVKLWDLEK 220
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/235 (24%), Positives = 111/235 (47%)
Query: 17 KLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVA 76
+LL +G + C+++ + + N I H S V + ++ R+ +GS S+
Sbjct: 34 RLLATGGED---CRVNIWA--VSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLR 88
Query: 77 IFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--------- 127
++ L+ L GH S+ L +H + L++ S D +++WD R
Sbjct: 89 LWDLEAAKILR---TLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDVRRKGCVFRYK 144
Query: 128 --TQKSQIM--------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATN 177
TQ + + LAS S D +V ++ L G + E + HT +V+ + +H N
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA-GKMITE--FTSHTSAVNVVQFHP-N 200
Query: 178 PDLLSTASGDKTVRIWDARTQKSQIIATKGEN---INITWAPNGNTIAVGNKEDL 229
LL++ S D+TV++WD + + I +++GE ++ + P+G+ + G++ L
Sbjct: 201 EYLLASGSADRTVKLWDLE-KFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTL 254
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 6 IQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDG 63
+ FH P EY L SGS +D +K ++ + Y+ H V +A+S DG
Sbjct: 111 LDFH-PMG-EY--LASGS-------VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 64 RRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 123
+ LAS S D +V ++ L G + E + HT +V+ + +H N LL++ S D+TV++
Sbjct: 160 KWLASASDDSTVKLWDLIA-GKMITE--FTSHTSAVNVVQFHP-NEYLLASGSADRTVKL 215
Query: 124 WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP-DLLS 182
WD +K M+ S + V L + +Y G ++ W D++
Sbjct: 216 WDL--EKFN-MIGSSEGETGVVRSVLFNP---DGSCLYSGSENTLRVYGWEPDRCFDVVH 269
Query: 183 TASGDKTVRIWDARTQKSQIIATKGENINITW 214
G ++ D +Q+IA + N++W
Sbjct: 270 VGWG----KVSDLAISNNQMIAVSYSHTNVSW 297
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ H + + S+ + G LASGS D ++ ++ + +KG + + Y+GHT +V L
Sbjct: 98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFR---YKGHTQAVRCL- 153
Query: 104 WHATNPD--LLSTASGDKTVRIWDARTQK-------------------SQIMLASGSFDK 142
A +PD L++AS D TV++WD K ++ +LASGS D+
Sbjct: 154 --AFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADR 211
Query: 143 SVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASG-DKTVRIW 193
+V ++ L+K + G TG V + + NPD SG + T+R++
Sbjct: 212 TVKLWDLEKFNMIGSS---EGETGVVRSVLF---NPDGSCLYSGSENTLRVY 257
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 106 ATNPDL-LSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIF---ALDKKGDLNKEVVY 161
A NPDL L S + W ++ Q L SGS D + ++ A K L+ + ++
Sbjct: 167 ACNPDLKLRGHSSEGYGLSW---SKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIF 223
Query: 162 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS----QIIATKGENIN-ITWAP 216
+ H G V+ + WH + L + D+ + IWD R+ + Q + +N + + P
Sbjct: 224 KAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNP 283
Query: 217 -NGNTIAVGNKEDLVTFIDVVK 237
N +A G+ + V D+ K
Sbjct: 284 FNEWVVATGSTDKTVKLFDLRK 305
Score = 112 (44.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 43 DIKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIF---ALDKKGDLNKEVVYRGHTGS 98
D+K + H S+ + ++WS + L SGS D + ++ A K L+ + +++ H G
Sbjct: 171 DLK-LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGV 229
Query: 99 VDQLCWHATNPDLLSTASGDKTVRIWDART 128
V+ + WH + L + D+ + IWD R+
Sbjct: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRS 259
Score = 76 (31.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI 192
++A+GS DK+V +F L K L+ + + H V Q+ W+ N +L++ + + +
Sbjct: 288 VVATGSTDKTVKLFDLRK---LSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMV 344
Query: 193 WD-ARTQKSQII 203
WD +R + Q +
Sbjct: 345 WDLSRIDEEQTV 356
>UNIPROTKB|Q13112 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0042393 "histone binding" evidence=NAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0033186
"CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin assembly"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=TAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005737 GO:GO:0006461
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 GO:GO:0051082 GO:GO:0006281
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0042393 GO:GO:0006335 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
EMBL:U20980 EMBL:AP000694 EMBL:AP001725 EMBL:BC021218 EMBL:X98262
IPI:IPI00011857 PIR:B56731 RefSeq:NP_005432.1 UniGene:Hs.75238
ProteinModelPortal:Q13112 SMR:Q13112 DIP:DIP-29243N IntAct:Q13112
STRING:Q13112 PhosphoSite:Q13112 DMDM:3121829 PaxDb:Q13112
PRIDE:Q13112 DNASU:8208 Ensembl:ENST00000314103 GeneID:8208
KEGG:hsa:8208 UCSC:uc002yvj.3 GeneCards:GC21P037757 HGNC:HGNC:1911
HPA:CAB033604 HPA:HPA021679 MIM:601245 neXtProt:NX_Q13112
PharmGKB:PA26447 HOVERGEN:HBG050780 InParanoid:Q13112
PhylomeDB:Q13112 ChiTaRS:CHAF1B GenomeRNAi:8208 NextBio:30919
Bgee:Q13112 CleanEx:HS_CHAF1B CleanEx:HS_MPP7 Genevestigator:Q13112
GermOnline:ENSG00000159259 Uniprot:Q13112
Length = 559
Score = 145 (56.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 50/167 (29%), Positives = 81/167 (48%)
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVV-----YRGHTGSVDQLCWHATNPDLLSTASGDK 119
RLAS D +V I+ ++K D K +V HT +V+ + + T ++L++ D
Sbjct: 31 RLASAGVDTNVRIWKVEKGPD-GKAIVEFLSNLARHTKAVNVVRFSPTG-EILASGGDDA 88
Query: 120 TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHATN 177
+ +W K +A D++ L+K+ N VV RGH V +CW AT+
Sbjct: 89 VILLWKVNDNKEPEQIAFQDEDEA----QLNKE---NWTVVKTLRGHLEDVYDICW-ATD 140
Query: 178 PDLLSTASGDKTVRIWD-ARTQKSQIIATKGENIN-ITWAPNGNTIA 222
+L+++AS D T IWD ++ QK I + +TW P G +A
Sbjct: 141 GNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVA 187
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/37 (21%), Positives = 21/37 (56%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKS---LPPRER 244
+I+W+ +G +A+ + + +F+ K +P +E+
Sbjct: 351 DISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEK 387
>UNIPROTKB|H3BRJ0 [details] [associations]
symbol:CORO1A "Coronin" species:9606 "Homo sapiens"
[GO:0005884 "actin filament" evidence=IEA] [GO:0001772
"immunological synapse" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0032796 "uropod
organization" evidence=IEA] [GO:0034097 "response to cytokine
stimulus" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0031252 GO:GO:0007015 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 GO:GO:0015629
GO:GO:0034097 GO:GO:0006816 GO:GO:0030335 GO:GO:0048873
GO:GO:0042102 GO:GO:0043029 GO:GO:0030833 GO:GO:0001772
GO:GO:0030595 GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2252 EMBL:AC012645
Ensembl:ENST00000563778 Bgee:H3BRJ0 Uniprot:H3BRJ0
Length = 249
Score = 109 (43.4 bits), Expect = 0.00073, P = 0.00073
Identities = 34/111 (30%), Positives = 53/111 (47%)
Query: 50 HGSKVHSVAWSC--DGRRLASGSFDKSVAIFALDKKG---DLNKEVV-YRGHTGSVDQLC 103
H + V +AW C + +ASGS D +V ++ + G L + VV GHT V +
Sbjct: 80 HTAPVLDIAW-CPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEGHTKRVGIVA 138
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGD 154
WH T ++L +A D + +WD T + ML G I+++D D
Sbjct: 139 WHTTAQNVLLSAGCDNVIMVWDVGTGAA--MLTLGPEVHPDTIYSVDWSRD 187
Score = 108 (43.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + G L + VV GHT V + WH T ++L +A D
Sbjct: 96 VIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEGHTKRVGIVAWHTTAQNVLLSAGCDNV 155
Query: 190 VRIWDARTQKSQIIATKGENIN------ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRE 243
+ +WD T + + T G ++ + W+ +G I ++ V I+ K E
Sbjct: 156 IMVWDVGTGAAML--TLGPEVHPDTIYSVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAE 213
Query: 244 RTLTSRG 250
+ G
Sbjct: 214 KDRPHEG 220
Score = 72 (30.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
+ L K G ++K GHT V + W N +++++ S D TV +W+
Sbjct: 61 VLPLGKTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE 110
>UNIPROTKB|H7BWW0 [details] [associations]
symbol:CORO1B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886 OMA:QGERICR
EMBL:DAAA02063620 EMBL:DAAA02063621 RefSeq:NP_001106714.1
UniGene:Bt.49709 ProteinModelPortal:H7BWW0 PRIDE:H7BWW0
Ensembl:ENSBTAT00000029972 GeneID:510128 KEGG:bta:510128
Uniprot:H7BWW0
Length = 488
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 96 VIASGSEDCTVMVWQIPENGLVSPLTEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNM 155
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 156 VLIWNVGTAEELYRLDSLHPDLIYNVSWNRNGSLFCTACKDKSVRVIDPRRGTLVAEREK 215
Query: 247 TSRG 250
G
Sbjct: 216 AHEG 219
Score = 74 (31.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 61 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 109
>UNIPROTKB|E2R7N5 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
EMBL:AAEX03011616 EMBL:AAEX03011614 EMBL:AAEX03011615
RefSeq:XP_533215.2 ProteinModelPortal:E2R7N5
Ensembl:ENSCAFT00000018367 GeneID:476007 KEGG:cfa:476007
NextBio:20851738 Uniprot:E2R7N5
Length = 489
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 74 (31.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>UNIPROTKB|C1BK83 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8014 "Osmerus
mordax" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BT075012 ProteinModelPortal:C1BK83
Uniprot:C1BK83
Length = 364
Score = 121 (47.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HATN 108
H +H V++ GRR+A+ S D+SV ++ G+ N ++ H+GSV ++ W H
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKTHSGSVWRVTWAHPEF 70
Query: 109 PDLLSTASGDKTVRIWD 125
+L++ S D+T +W+
Sbjct: 71 GQVLASCSFDRTAAVWE 87
Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 152 KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDA 195
K ++ + + GH V ++ W+ T+ LL+++ D VR+W A
Sbjct: 264 KLEVQLQAQFDGHNSQVWRVSWNITST-LLASSGDDGCVRLWKA 306
Score = 39 (18.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/65 (20%), Positives = 23/65 (35%)
Query: 122 RIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLL 181
++W + +LAS D V ++ + + + RG V+ A P
Sbjct: 279 QVWRVSWNITSTLLASSGDDGCVRLWKANYMDNWKCTGILRGDGSPVNGAAGQAGTPGAA 338
Query: 182 STASG 186
T G
Sbjct: 339 GTPGG 343
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 58/214 (27%), Positives = 104/214 (48%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++ H + + SV +S +G++LA+GS+D + +++L + + Y GH + + +
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQA---RAFRYVGHKDVITSVQFSP 70
Query: 107 TNPDLLSTASGDKTVRIW--DARTQKSQI-----------------MLASGSFDKSVAIF 147
+LL++AS D+T+R+W D R + S+ LAS S DKS+ ++
Sbjct: 71 LG-NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIAT 205
+ ++ L +YR HT V C +PD L+ + S DKT++IWD T Q +
Sbjct: 130 NMYRQRFLYS--LYR-HTHWVR--C-AKFSPDGRLIVSCSEDKTIKIWD--TTNKQCVNN 181
Query: 206 KGENIN----ITWAPNGNTIAVGNKEDLVTFIDV 235
+ + + + PNG IA + V D+
Sbjct: 182 FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI 215
Score = 145 (56.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/209 (25%), Positives = 97/209 (46%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
Y H + SV +S G LAS S D+++ ++ DK+G K ++ HT V + + A
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRG---KSSEFKAHTAPVRSVDFSA 112
Query: 107 TNPDLLSTASGDKTVRIWDARTQKSQIML---------ASGSFDKSVAIFALDKK----- 152
L++AS DK++++W+ Q+ L A S D + + + K
Sbjct: 113 DG-QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 153 GDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKS-QIIATKGEN 209
NK+ V + V + A NP+ +++A D TV+IWD R K Q
Sbjct: 172 DTTNKQCV-NNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 210 IN-ITWAPNGNTIAVGNKEDLVTFIDVVK 237
+N +++ P+GN + + + + +D+++
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLE 259
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/171 (31%), Positives = 89/171 (52%)
Query: 46 EYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH 105
E++AH + V SV +S DG+ LAS S DKS+ ++ + ++ L +YR HT V C
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYS--LYR-HTHWVR--C-A 150
Query: 106 ATNPD--LLSTASGDKTVRIWDARTQK-----SQIM--------------LASGSFDKSV 144
+PD L+ + S DKT++IWD ++ S + +AS D +V
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTV 210
Query: 145 AIFALDKKGDLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
I+ + +NK + Y+ H+G V+ + +H + + L TAS D T++I D
Sbjct: 211 KIWDIR----VNKLLQHYQVHSGGVNCVSFHPSG-NYLITASSDGTLKILD 256
>UNIPROTKB|F1Q473 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 EMBL:AAEX03011616
EMBL:AAEX03011614 EMBL:AAEX03011615 Ensembl:ENSCAFT00000039783
Uniprot:F1Q473
Length = 501
Score = 115 (45.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVVY-RGHTGSVDQLCWHATNPDLLSTASGDKT 189
++ASGS D +V ++ + + G L + VV GHT V + WH T ++L +A D
Sbjct: 97 VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNV 156
Query: 190 VRIWDARTQKS--QIIATKGENI-NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTL 246
V IW+ T + ++ + + I N++W NG+ K+ V ID + ER
Sbjct: 157 VLIWNVGTAEELYRLDSLHPDLIYNVSWNRNGSLFCSACKDKSVRIIDPRRGTLVAEREK 216
Query: 247 TSRG 250
G
Sbjct: 217 AHEG 220
Score = 74 (31.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K GHTG V + W N +++++ S D TV +W
Sbjct: 62 VLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVW 110
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/129 (26%), Positives = 66/129 (51%)
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRG 163
W + +G + V + D + ++AS SFDKSV ++ + D +RG
Sbjct: 360 WRNNQNKCVERMTGHQNV-VNDVKYSPDVKLIASASFDKSVRLW---RASDGQYMATFRG 415
Query: 164 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGENI-NITWAPNGNTI 221
H +V + W A + L+ + S D T+++W +T+K +Q + + + + WAP+G+ +
Sbjct: 416 HVQAVYTVAWSADSR-LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRV 474
Query: 222 AVGNKEDLV 230
A G K+ ++
Sbjct: 475 ASGGKDKVI 483
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/104 (29%), Positives = 55/104 (52%)
Query: 29 CKIDD--YVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL 86
C D+ Y+ N + ++ H + V+ V +S D + +AS SFDKSV ++ + D
Sbjct: 351 CSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW---RASDG 407
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 130
+RGH +V + W A + L+ + S D T+++W +T+K
Sbjct: 408 QYMATFRGHVQAVYTVAWSADSR-LIVSGSKDSTLKVWSVQTKK 450
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 20 PSGSQFHLVCKIDDY-VKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGSFDKSVA 76
P G+ HL D V+ ++ + + + G K V V+W+ DG+RLASG K+ +
Sbjct: 129 PDGA--HLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGC--KAGS 184
Query: 77 IFALDKKGDLNKEVVYRGHTGSVDQLCW--HATNPDL--LSTASGDKTVRIWDARTQKSQ 132
I D + K GH ++ L W + +P+ L++ASGD RIWD + +
Sbjct: 185 IIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQC- 243
Query: 133 IMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC--WHATNPDLLSTASG 186
+M +G + A+ + G ++Y T S D+ W A + L T SG
Sbjct: 244 LMNIAGHTNAVTAV----RWGGAG--LIY---TSSKDRTVKMWRAADGILCRTFSG 290
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 122 (48.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ KLL S + ++ D T I+ ++ H V +A G LA+ D
Sbjct: 69 SPDDKLLFSAGHSRQI-RVWD----LETLKCIRSWKGHEGPVMGMACHASGGLLATAGAD 123
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA-TNPDLLSTASGDKTVRIWDAR---T 128
+ V ++ +D G +RGH G V + +H +N ++L + S D TVR+WD T
Sbjct: 124 RKVLVWDVD--GGFCTHY-FRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT 180
Query: 129 QKSQIMLASGSFDKSVAIFALDKKG 153
+K + + F +V AL + G
Sbjct: 181 EKKCLAIMEKHFS-AVTSIALSEDG 204
Score = 72 (30.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 160 VYRGHTGSVDQL--CWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGENINI 212
V GH V L C ++ L+ T S DKTVR+W+A T KS I G N +I
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNA-TSKSCIGVGTGHNGDI 449
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 155 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK-SQIIATKGE---NI 210
L+K +V G+ + + + L+ A+ + VR++D T S ++A E ++
Sbjct: 350 LSKRLV--GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSL 407
Query: 211 NITWAPNGNTIAV-GNKEDLV 230
+ + +GN + V G+K+ V
Sbjct: 408 DTCVSSSGNVLIVTGSKDKTV 428
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
Q H ++ VAW G AS DK++ I++L K ++ GH ++ ++ W
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPC 70
Query: 108 NPDLLSTASGDKTVRIWDART-------QKSQI----------MLASGSFDKSVAIFALD 150
+ L++AS D T IW ++++ +LA+ S DKSV I+ +
Sbjct: 71 G-EYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 129
Query: 151 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+ V H+ V ++ WH T ++L++AS D T++++
Sbjct: 130 GDDEFECAAVLNAHSQDVKRVVWHPTK-EILASASYDNTIKMY 171
Score = 131 (51.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 15 EYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKS 74
E + P G ++ D ++ H + H ++V SV+WS G LA+ S DKS
Sbjct: 64 EVRWSPCG-EYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKS 122
Query: 75 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
V I+ + + V H+ V ++ WH T ++L++AS D T++++ S
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTK-EILASASYDNTIKMYAESALDSDWD 181
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP-DLLSTASGDKTVRIW 193
+ + ++++D D + +V ++ W A +P + A+ DKT +W
Sbjct: 182 CTATLSSHTSTVWSIDFDAD-GERLVSCSDDATLK--IWRAYHPGNEAGIATPDKTT-VW 237
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 142 (55.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/171 (29%), Positives = 78/171 (45%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ Y H +V+ A+S DGR L + S D V ++ K G L + GH G V C
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGT-KSGRLLWRLA--GHRGPVKSCC 75
Query: 104 WHATNPD--LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKK----GDLNK 157
+ +PD L++++S D ++R+WD K +L F+ D K G +K
Sbjct: 76 F---SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Query: 158 E-VVYR-----------GHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
+V+ GH S+ + T+ D L+T S D TV IWD R
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTS-DSLATGSWDSTVHIWDLR 182
Score = 138 (53.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 57/204 (27%), Positives = 95/204 (46%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
SP+ +L+ S S H + ++ D + H + H V +V++S D ++LASG +D
Sbjct: 77 SPDGRLIASSSSDHSI-RLWDVARSKCLH----VLKGHQRSVETVSFSPDSKQLASGGWD 131
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
K ++ + ++ V GH S+ + T+ D L+T S D TV IWD R
Sbjct: 132 KRAIVWEVQSGRRVHLLV---GHCDSIQSSDFSPTS-DSLATGSWDSTVHIWDLRASTPV 187
Query: 133 IM---LASGSFDKSVAIFA---LDKKGDLNKEV-VYRGHTGSVD-QLCWH-------ATN 177
+ L + + S ++ L G +K + V++ T ++ QL H A +
Sbjct: 188 VSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFS 247
Query: 178 PDLLSTASG--DKTVRIWDARTQK 199
PD L AS +TV++WD T K
Sbjct: 248 PDELKLASAGYSRTVKVWDCLTGK 271
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 48/199 (24%), Positives = 86/199 (43%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
E+ H S V+SV W+ G LA GS D ++++ G + + HT + +
Sbjct: 98 EHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I +K ASG D + ++ ++ G +E
Sbjct: 158 WAPAVVPGSLIDQPSGQKPNYI-----KK----FASGGCDNLIKLWKEEEDGQWKEEQKL 208
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW---DA--RTQKSQIIATKGENI-NI 212
H+ V + W + P +++ S D V +W DA T +++ + + ++
Sbjct: 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHV 268
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 269 SWSITANILAVSGGDNKVT 287
Score = 105 (42.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 105 (42.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N + + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K + GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 79 (32.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K + GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWK-EENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 --------WDARTQKSQIIATKGENINITWAP 216
W+ + K T G N ++WAP
Sbjct: 132 LTYTGLGQWEVK--KINNAHTIGCNA-VSWAP 160
Score = 49 (22.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/95 (20%), Positives = 37/95 (38%)
Query: 135 LASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D V ++ D G+ + V + W T ++L+ + GD V +W
Sbjct: 231 IASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLW 289
Query: 194 DARTQKSQIIATKGENINITWAPNGNTIAVGNKED 228
+ + ++N P ++ G + D
Sbjct: 290 KESVDGQWVCIS---DVNKGQGPVSTSVTEGQQND 321
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 127 (49.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/95 (32%), Positives = 55/95 (57%)
Query: 44 IKEYQAHGSKVHSVAWS-CDGRRLA-SGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVD 100
++ Y+ H +V+SV WS G +L SGS+D++V ++ D + K + +RGH +
Sbjct: 104 LQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLW--DPT--VGKSLCTFRGHESVIY 159
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P ++ASGD+T+RIWD ++ +I++
Sbjct: 160 STIWSPHIPGCFASASGDQTLRIWDVKSTGVRIVV 194
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 63 GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWH---ATNPDLLSTASGDK 119
G RL SFD + +F D N E + +G W AT P + +
Sbjct: 57 GLRLFR-SFDWNDGLF--DVTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQE 113
Query: 120 TVRI-WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATN 177
+ W ++T+ Q+++ SGS+D++V ++ D + K + +RGH + W
Sbjct: 114 VYSVDW-SQTRGEQLVV-SGSWDQTVKLW--DPT--VGKSLCTFRGHESVIYSTIWSPHI 167
Query: 178 PDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
P ++ASGD+T+RIWD ++ +I+ A + E ++ W N N + G
Sbjct: 168 PGCFASASGDQTLRIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTG 217
Score = 53 (23.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D +V + K L + V + HT L +P ++ + D+T++I+
Sbjct: 257 VLASCSYDFTVRFWNFSKPDPLLETVEH--HTEFTCGLDLSLQSPTQVADCAWDETIKIY 314
Query: 194 D 194
D
Sbjct: 315 D 315
Score = 51 (23.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 240 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 271
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
E+ H S V+SV W+ G LA GS D ++++ +G + + HT + +
Sbjct: 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I K ASG D + ++ ++ G +E
Sbjct: 158 WAPAVVPGSLIDHPSGQKPNYI------KR---FASGGCDNLIKLWKEEEDGQWKEEQKL 208
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW---DARTQK-SQIIATKGENI--NI 212
H+ V + W + P +++ S D V IW DA + S + K ++ ++
Sbjct: 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHV 268
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 269 SWSITANILAVSGGDNKVT 287
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 111 LLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 170
+++T I DA+ LA+ S D+SV IF + G + + RGH G V Q
Sbjct: 4 VINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQ 62
Query: 171 LCW-HATNPDLLSTASGDKTVRIW---DARTQKSQIIATKGENIN-ITWAPN--GNTIAV 223
+ W H ++L++ S D+ V IW + +KS A ++N + WAP+ G +A
Sbjct: 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC 122
Query: 224 GNKEDLVTFI 233
G+ + ++ +
Sbjct: 123 GSSDGAISLL 132
Score = 107 (42.7 bits), Expect = 0.00045, Sum P(2) = 0.00044
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N I + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K + GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 104 (41.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 80 (33.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K + GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWR-EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 --------WDARTQKSQIIATKGENINITWAP 216
W+ + K T G N ++WAP
Sbjct: 132 LTYTGEGQWEVK--KINNAHTIGCNA-VSWAP 160
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00044
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 169 DQLCWHAT---NPDLLSTASGDKTVRIW 193
+ + WH + ++L+ + GD V +W
Sbjct: 262 NDVVWHVSWSITANILAVSGGDNKVTLW 289
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 100 (40.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/125 (24%), Positives = 57/125 (45%)
Query: 10 TPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHN-DIKEYQAHGSKVHSVAWSCDGRRLAS 68
T + + K+ P+GS + D ++ +N N D +Y+ H ++ W D S
Sbjct: 172 TQEINKLKVSPNGS-LAVGFSADGVIRSYNLDNFDSVDYKYHKQGGIALDW-VDNNGFLS 229
Query: 69 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
GS D +A++ +DK + +++GH G+++ + L + S D T + D R
Sbjct: 230 GSNDAQIALWQVDKSSTPLQ--LFKGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDTRV 286
Query: 129 QKSQI 133
+ I
Sbjct: 287 NATDI 291
Score = 89 (36.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
Q + A+G D V+++ + ++ + GH SV QL W NPD+L + DK +
Sbjct: 313 QTLYATGGKDNVVSLYDIRNYSTPFRK--FYGHNDSVRQLQWDWNNPDILVSCGLDKRII 370
Query: 192 IWDAR 196
WD +
Sbjct: 371 FWDLK 375
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 100 (40.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/125 (24%), Positives = 57/125 (45%)
Query: 10 TPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHN-DIKEYQAHGSKVHSVAWSCDGRRLAS 68
T + + K+ P+GS + D ++ +N N D +Y+ H ++ W D S
Sbjct: 172 TQEINKLKVSPNGS-LAVGFSADGVIRSYNLDNFDSVDYKYHKQGGIALDW-VDNNGFLS 229
Query: 69 GSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
GS D +A++ +DK + +++GH G+++ + L + S D T + D R
Sbjct: 230 GSNDAQIALWQVDKSSTPLQ--LFKGHHGAINDIS-SIKEKHLFGSVSDDSTTQFHDTRV 286
Query: 129 QKSQI 133
+ I
Sbjct: 287 NATDI 291
Score = 89 (36.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 132 QIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVR 191
Q + A+G D V+++ + ++ + GH SV QL W NPD+L + DK +
Sbjct: 313 QTLYATGGKDNVVSLYDIRNYSTPFRK--FYGHNDSVRQLQWDWNNPDILVSCGLDKRII 370
Query: 192 IWDAR 196
WD +
Sbjct: 371 FWDLK 375
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 137 (53.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 54/199 (27%), Positives = 91/199 (45%)
Query: 44 IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQ 101
I E+ H + V+SV+W+ G L S D V++ + G + V++ H +
Sbjct: 95 IAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTS-HVIFDAHAIGANS 153
Query: 102 LCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLN-KEVV 160
W P +ST+S D A Q+ +I+ + GS D I+ D + +E
Sbjct: 154 ATWA---P--VSTSSKDSA-----ALKQQRRIV-SCGS-DNLAKIWKYDAANNTYVEEAK 201
Query: 161 YRGHTGSVDQLCWHATN--PDLLSTASGDKTVRIW----DARTQKSQIIATKGENI--NI 212
GHT V + W +N ++TAS D+TV IW D + QK + K ++
Sbjct: 202 LEGHTDWVRDVAWSPSNLIRSYIATASQDRTVLIWTQDRDGKWQKQLLTEEKFPDVCWRC 261
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ +GN +AV ++ V+
Sbjct: 262 SWSLSGNILAVSGGDNKVS 280
Score = 110 (43.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
AH +H G+RLA+ S DK++ IF LD + GH G V Q+ W H
Sbjct: 7 AHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPK 66
Query: 108 NPDLLSTASGDKTVRIWDARTQKSQ 132
+L++ S D IW + + Q
Sbjct: 67 FGSILASCSYDGKALIWKEQPETQQ 91
Score = 71 (30.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
+A+ S D++V I+ D+ G K+++ V C + + ++L+ + GD V +W
Sbjct: 224 IATASQDRTVLIWTQDRDGKWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWK 283
Query: 195 ARTQ 198
Q
Sbjct: 284 ENLQ 287
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 141 (54.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 48/167 (28%), Positives = 82/167 (49%)
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVV-----YRGHTGSVDQLCWHATNPDLLSTASGDK 119
RLAS D +V ++ ++K D K +V HT +V+ + + + N ++L++ D
Sbjct: 31 RLASAGVDTAVRVWKVEKGPD-GKAIVEFLSNLARHTKAVNVVRF-SPNGEILASGGDDA 88
Query: 120 TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHATN 177
+ +W K +A D++ L+K+ N VV RGH V +CW AT+
Sbjct: 89 VILLWKVNDNKEPEQVAFQDEDEA----QLNKE---NWTVVKTLRGHLEDVYDICW-ATD 140
Query: 178 PDLLSTASGDKTVRIWD-ARTQKSQIIATKGENIN-ITWAPNGNTIA 222
+L+++AS D T +WD ++ QK I + +TW P G +A
Sbjct: 141 GNLMASASVDNTAIMWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVA 187
Score = 44 (20.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/41 (21%), Positives = 23/41 (56%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKS---LPPRERTLTS 248
+I+W+ +G +A+ + + +F+ K +P +E+ + S
Sbjct: 364 DISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLS 404
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
E+ H S V+SV W+ G LA GS D ++++ +G + + HT + +
Sbjct: 98 EHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I +K ASG D + ++ ++ G +E
Sbjct: 158 WAPAVVPGSLIDQPSGQKPNYI-----KK----FASGGCDNLIKLWREEEDGQWKEEQKL 208
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW---DARTQK-SQIIATKGENI--NI 212
H+ V + W + P +++ S D V IW DA S + K ++ ++
Sbjct: 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHV 268
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 269 SWSITANILAVSGGDNKVT 287
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N I + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K + GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 104 (41.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K + GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWK-EENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 --------WDARTQKSQIIATKGENINITWAP 216
W+ + K T G N ++WAP
Sbjct: 132 LTYTGEGQWEVK--KINNAHTIGCNA-VSWAP 160
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 135 LASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D V I+ D G++ + V + W T ++L+ + GD V +W
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLW 289
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
E+ H S V+SV W+ G LA GS D ++++ +G + + HT + +
Sbjct: 98 EHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I +K ASG D + ++ ++ G +E
Sbjct: 158 WAPAVVPGSLIDQPSGQKPNYI-----KK----FASGGCDNLIKLWREEEDGQWKEEQKL 208
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW---DARTQK-SQIIATKGENI--NI 212
H+ V + W + P +++ S D V IW DA S + K ++ ++
Sbjct: 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHV 268
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 269 SWSITANILAVSGGDNKVT 287
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N I + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K + GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 104 (41.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K + GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWK-EENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 --------WDARTQKSQIIATKGENINITWAP 216
W+ + K T G N ++WAP
Sbjct: 132 LTYTGEGQWEVK--KINNAHTIGCNA-VSWAP 160
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 135 LASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D V I+ D G++ + V + W T ++L+ + GD V +W
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLW 289
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 46 EYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
E+ H S V+SV W+ G LA GS D ++++ +G + + HT + +
Sbjct: 98 EHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157
Query: 104 WH-ATNP-DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVY 161
W A P L+ SG K I +K ASG D + ++ ++ G +E
Sbjct: 158 WAPAVVPGSLIDQPSGQKPNYI-----KK----FASGGCDNLIKLWKEEEDGQWKEEQKL 208
Query: 162 RGHTGSVDQLCWHATN--P-DLLSTASGDKTVRIW-----DARTQKSQIIATKGENI-NI 212
H+ V + W + P +++ S D V IW T +++ + + ++
Sbjct: 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDTSGNTWSPKLLHKFNDVVWHV 268
Query: 213 TWAPNGNTIAVGNKEDLVT 231
+W+ N +AV ++ VT
Sbjct: 269 SWSITANILAVSGGDNKVT 287
Score = 106 (42.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 29 CKIDDYVKHFNTHND----IKEYQAHGSKVHSVAWSCD--GRRLASGSFDKSVAIFALDK 82
C D VK F+ N I + + H V VAW+ G LAS S+D+ V I+ ++
Sbjct: 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWK-EE 89
Query: 83 KGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 123
G K + GH SV+ +CW + L L+ S D + +
Sbjct: 90 NGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Score = 104 (41.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW-HAT 107
+H +H G RLA+ S D+SV IF + G + + RGH G V Q+ W H
Sbjct: 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPM 69
Query: 108 NPDLLSTASGDKTVRIW 124
++L++ S D+ V IW
Sbjct: 70 YGNILASCSYDRKVIIW 86
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDL-LSTASGDKTVRI 192
+LAS S+D+ V I+ ++ G K + GH SV+ +CW + L L+ S D + +
Sbjct: 73 ILASCSYDRKVIIWK-EENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131
Query: 193 --------WDARTQKSQIIATKGENINITWAP 216
W+ + K T G N ++WAP
Sbjct: 132 LTYTGEGQWEVK--KINNAHTIGCNA-VSWAP 160
Score = 46 (21.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 135 LASGSFDKSVAIFALDK-KGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D V I+ D G+ + V + W T ++L+ + GD V +W
Sbjct: 231 IASCSQDGRVFIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSIT-ANILAVSGGDNKVTLW 289
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQLCW-HAT 107
H VH + G+ LA+ S DK + IF D G+ + +V RGH G V Q+ W H
Sbjct: 10 HEDMVHDAQFDYYGKFLATCSSDKMIKIF--DVGGENPQHLVDLRGHEGPVWQVAWAHPK 67
Query: 108 NPDLLSTASGDKTVRIW 124
+L++AS D+ V +W
Sbjct: 68 FGKILASASYDRKVIVW 84
Score = 79 (32.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHATNPDL-LSTASGDKTV 190
+LAS S+D+ V ++ + G+ + ++ Y GH SV+ + W L L+ AS D +V
Sbjct: 71 ILASASYDRKVIVWK--EVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSV 128
Query: 191 RI-------WDARTQKSQIIATKGENINITWAP 216
I W+A QK Q+ + G N +++W+P
Sbjct: 129 TIHNYNNNVWEA-PQKIQV-SQIGVN-SVSWSP 158
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+AS S D+SV ++ D+ G + + + + V ++ W ++L+ + GD V +W
Sbjct: 228 IASCSQDRSVIVWTQDENGVWSGKPLPK-FDDIVWRVSWSVIG-NILAVSCGDNQVTLW 284
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 61/225 (27%), Positives = 109/225 (48%)
Query: 32 DDY-VK--HFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNK 88
DDY +K +T+ + H V +V + + + S S D+++ I+ + K
Sbjct: 73 DDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNR----K 128
Query: 89 EVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD-ARTQKSQIMLASGSFDKSVAI 146
E+ GH V +H T+ DL+ +AS D+T+RIWD + +K + SF++ ++
Sbjct: 129 EIACLTGHNHFVMCAQFHPTD-DLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSA 187
Query: 147 FA--LDKK-GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII 203
LD GD + + GHT V+ +H T P L+ + S D+ V++W K+ +
Sbjct: 188 QQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLP-LIVSGSDDRQVKLWRMSATKAWEV 246
Query: 204 AT-KGENINIT---WAPNGNTI-AVGNKEDLVTFIDVVKSLPPRE 243
T +G N+ + P+ N I +VG + L + D+ K P ++
Sbjct: 247 DTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVW-DLDKRTPVKQ 290
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 141 (54.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHAT 107
Q H ++ VAW G AS DK++ I++L K ++ GH ++ ++ W
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPC 70
Query: 108 NPDLLSTASGDKTVRIWDART-------QKSQI----------MLASGSFDKSVAIFALD 150
+ L++AS D T IW ++++ +LA+ S DKSV I+ +
Sbjct: 71 G-EYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 129
Query: 151 KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+ V H+ V ++ WH T ++L++AS D T++++
Sbjct: 130 GDDEFECAAVLNAHSQDVKRVVWHPTK-EVLASASYDNTIKMF 171
Score = 128 (50.1 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 15 EYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKS 74
E + P G ++ D ++ H + H ++V SV+WS G LA+ S DKS
Sbjct: 64 EVRWSPCG-EYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKS 122
Query: 75 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIM 134
V I+ + + V H+ V ++ WH T ++L++AS D T++++ S
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTK-EVLASASYDNTIKMFAESALDSDWD 181
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP-DLLSTASGDKTVRIW 193
+ + ++++D D + +V ++ W A +P + A+ DKT +W
Sbjct: 182 CTATLSSHTSTVWSIDFDAD-GERLVSCSDDATLK--IWRAYHPGNDAGIATPDKTT-VW 237
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 44 IKEYQAH-GSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDL--NKEVVYRGHTGSVD 100
++++ AH S+ VAW+ G LAS D+++ I+ ++GD K V+ GH +V
Sbjct: 8 LQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWG--REGDSWECKTVLQDGHQRTVR 65
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQ-----------KSQI----------MLASGS 139
++ W + L++AS D T IW + ++++ +LA+ S
Sbjct: 66 KVAWSPCG-NYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCS 124
Query: 140 FDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 199
DKSV I+ +D++ + V HT V + WH T +LL++ S D V ++
Sbjct: 125 RDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQ-ELLASCSYDNNVCVYKEEDDD 183
Query: 200 SQIIATKGENINITWA----PNGNTIA 222
+ AT + + W P+G +A
Sbjct: 184 WECRATLEGHTSTVWGLTFDPSGQRLA 210
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ DG LA GS+D I+ + G+L + H G + L W+ +LS
Sbjct: 238 VTSLDWNSDGTLLAMGSYDGFARIWT--ENGNLASTLGQ--HKGPIFALKWNKKGNYVLS 293
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD------KSVAIFALD------KKGDLNKE 158
A DKT IWDA T K Q S + D + A + D + G +
Sbjct: 294 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPV 352
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS--QIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + + A E I W+P
Sbjct: 353 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 411
Query: 217 NG 218
G
Sbjct: 412 TG 413
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/113 (32%), Positives = 61/113 (53%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + TH +K H V+SVA+S DG+ LASGSFD
Sbjct: 418 NPNSSIMLASASFDSTVRLWDVEQGVCTHTLMK----HQEPVYSVAFSPDGKYLASGSFD 473
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
K V I+ + G L Y+G TG + ++CW+A D + ++ D +V + D
Sbjct: 474 KYVHIWNT-QSGSLVHS--YQG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 521
Score = 106 (42.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/100 (27%), Positives = 53/100 (53%)
Query: 34 YVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYR 93
+V + +K +Q H ++V+++ W G LAS S D ++ I+++ + ++ +
Sbjct: 342 HVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHD---LQ 398
Query: 94 GHTGSVDQLCWHAT-----NPD---LLSTASGDKTVRIWD 125
H+ + + W T NP+ +L++AS D TVR+WD
Sbjct: 399 AHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 135 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
LASGSFDK V I+ + G L Y+G TG + ++CW+A D + ++ D +V + D
Sbjct: 467 LASGSFDKYVHIWNT-QSGSLVHS--YQG-TGGIFEVCWNARG-DKVGASASDGSVCVLD 521
Score = 76 (31.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+++ H + V W + AS S D + + L G + ++GHT V+ + W
Sbjct: 312 QQFPFHSAPALDVDWQ-NNMTFASCSTDMCIHVCRL---GCDHPVKTFQGHTNEVNAIKW 367
Query: 105 HATNPDLLSTASGDKTVRIWDAR 127
+ LL++ S D T++IW +
Sbjct: 368 DPSGM-LLASCSDDMTLKIWSMK 389
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKK-GDLNKEVVYRGHTGSVDQLCWHATN 108
H + +AWSC G LAS SFD +VA++ DKK G+ GH V + W +
Sbjct: 59 HTRTIRELAWSCCGHYLASASFDTTVAVW--DKKSGEFECNATLEGHDNEVKSVTWSRSG 116
Query: 109 PDLLSTASGDKTVRIWD 125
+LL+T S DK+V IW+
Sbjct: 117 -NLLATCSRDKSVWIWE 132
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLC 103
+ H ++V SV WS G LA+ S DKSV I+ + D E V GHT V ++C
Sbjct: 101 EGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVC 160
Query: 104 WHATNPDLLSTASGDKTVRIW--DARTQKSQIMLASGSFDKSVAIFALDKKG 153
WH DLL++AS D T+R++ D + +++ S +V + D G
Sbjct: 161 WHPQE-DLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATG 211
Score = 129 (50.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 110 DLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSV 168
+LL T +G R+W A + AS DK++ ++ D + + V+ GHT ++
Sbjct: 5 ELLQTLTGHAG-RVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTI 63
Query: 169 DQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT-KG---ENINITWAPNGNTIAVG 224
+L W L++AS D TV +WD ++ + + AT +G E ++TW+ +GN +A
Sbjct: 64 RELAWSCCG-HYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATC 122
Query: 225 NKEDLVTFIDVVKSLPPRE 243
+++ V +I + P +E
Sbjct: 123 SRDKSV-WIWEIHHAPDQE 140
Score = 129 (50.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 42/155 (27%), Positives = 72/155 (46%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ ++H S V S+++ G+RLAS S D +V ++ + G N + G++
Sbjct: 192 LEPLESHSSTVWSISFDATGQRLASCSEDTTVKVW--QQYGPDNALGIPCPDRGTI---- 245
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKE----- 158
W + T SG + ++D K +LA+ D +V IF D N+
Sbjct: 246 WKC-----VCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELV 300
Query: 159 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
V H+ +++ WH T P LL TAS D +++W
Sbjct: 301 VTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLW 335
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H +V S AW G+ AS DK++ ++ D + + V+ GHT ++ +L W
Sbjct: 13 HAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAWSCCG 72
Query: 109 PDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL 155
L++AS D TV +WD ++ + + D V + G+L
Sbjct: 73 -HYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNL 118
Score = 105 (42.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLCWHATNPDLLSTAS 185
+S +LA+ S DKSV I+ + D E V GHT V ++CWH DLL++AS
Sbjct: 114 RSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE-DLLASAS 172
Query: 186 GDKTVRIW 193
D T+R++
Sbjct: 173 YDNTIRMY 180
Score = 69 (29.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD-ARTQK--SQIMLASG 138
GH G V WH L ++ DKT+R+W+ + T + +Q +L G
Sbjct: 12 GHAGRVWSAAWHPGGK-LFASCGEDKTIRVWNKSDTDRWVAQTVLTDG 58
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 145 (56.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 54/166 (32%), Positives = 80/166 (48%)
Query: 94 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD-------------ARTQKSQIMLASGSF 140
GHT + C+H + D L+T+SGD TV++WD +R S + G+F
Sbjct: 392 GHTDWLSDCCFHPSG-DKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNF 450
Query: 141 DKSVAIFALDKKGDLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
S ++ K D+N E +Y GHT SV+ + + + LL T+S DKT+ IWDAR
Sbjct: 451 VASSSLDKTSKIWDVNSERCRCTLY-GHTDSVNSIEFFPFSNTLL-TSSADKTLSIWDAR 508
Query: 197 TQK-SQIIATKGENIN-ITWAPNGNTIAVGNKEDLVTFIDVVKSLP 240
T Q + +IN + P G+ IA + + D K LP
Sbjct: 509 TGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLP 554
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 38/112 (33%), Positives = 56/112 (50%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
I ++ H V S W G +AS S DK+ I+ D + + +Y GHT SV+ +
Sbjct: 429 ILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIW--DVNSERCRCTLY-GHTDSVNSIE 485
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDL 155
+ + LL T+S DKT+ IWDART + L + AIF D +G +
Sbjct: 486 FFPFSNTLL-TSSADKTLSIWDARTGICEQSLYGHMHSINDAIF--DPRGHM 534
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 60/228 (26%), Positives = 102/228 (44%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
++ V+W+ +GRRL +GS S F L N E + + H +V + W + N D +
Sbjct: 128 INCVSWTPEGRRLVTGS---SSGEFTLWNGLTFNFETILQAHDSAVRSIIW-SHNEDWMV 183
Query: 114 TA--SGD--------KTVRIWDARTQK---------SQIMLASGSFDKSVAIFALDKKGD 154
+ SG+ V+I+ A Q + + LAS + DK + I+ + +
Sbjct: 184 SGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTE 243
Query: 155 LNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT----KGENI 210
N+ V GH V + WH L+ + D ++IWDA++ SQ I T K
Sbjct: 244 DNQLV---GHGWDVKCVSWHPQK-SLIVSGGKDNNIKIWDAKS--SQNITTLHGHKSTVS 297
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL 258
+ W NGN I + + L+ D+ +++ + T +GH E +L
Sbjct: 298 KVEWNQNGNWIVSASSDQLLKVFDI-RTMKEMQ---TFKGHGKEVTAL 341
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/221 (25%), Positives = 105/221 (47%)
Query: 35 VKHFNTH-NDIKEYQAHG-SKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVY 92
+K++ + N++K ++AH SK+ +++S +LAS + DK + I+ + + N+ V
Sbjct: 191 IKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLV-- 248
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ---------KSQIMLA----SGS 139
GH V + WH L+ + D ++IWDA++ KS + +G+
Sbjct: 249 -GHGWDVKCVSWHPQK-SLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGN 306
Query: 140 FDKSVAIFALDKKGDLN--KEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRI--WD 194
+ S + L K D+ KE+ ++GH V L H + DL SGDK +I W
Sbjct: 307 WIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLF--VSGDKDGKILYWI 364
Query: 195 ARTQKSQ--IIATKGENI-NITWAPNGNTIAVGNKEDLVTF 232
+ Q I + ++ +++W P G+ +A G+ + F
Sbjct: 365 VGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKF 405
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 49/186 (26%), Positives = 91/186 (48%)
Query: 48 QAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGS-VDQLCWHA 106
QAH S V S+ WS + + SG ++ + + ++N +++ H S + L +
Sbjct: 164 QAHDSAVRSIIWSHNEDWMVSGDDSGNIKYW----QPNMNNVKIFKAHEQSKIRGLSFSP 219
Query: 107 TNPDLLSTASGDKTVRIWD-AR-TQKSQI-----------------MLASGSFDKSVAIF 147
T+ L S A DK ++IWD AR T+ +Q+ ++ SG D ++ I+
Sbjct: 220 TDLKLASCAD-DKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIW 278
Query: 148 ALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG 207
D K N ++ GH +V ++ W+ N + + +AS D+ ++++D RT K ++ KG
Sbjct: 279 --DAKSSQNITTLH-GHKSTVSKVEWNQ-NGNWIVSASSDQLLKVFDIRTMK-EMQTFKG 333
Query: 208 ENINIT 213
+T
Sbjct: 334 HGKEVT 339
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 54/234 (23%), Positives = 106/234 (45%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P+ ++ +GS K+ D + ++ H +++ S+++ G R+ +GSFD
Sbjct: 186 NPQSTVVATGSM-DTTAKLWD----IQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFD 240
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQ 132
+V ++ ++ + GH + + + + L+ T S DKT +WDA + K
Sbjct: 241 HTVVVWDASTGRKVHTLI---GHCAEISSALF-SWDCSLILTGSMDKTCMLWDATSGKCV 296
Query: 133 IMLAS-------GSFD---KSVAIFALDKKGDL----NKEVVYR--GHTGSVDQLCWHAT 176
L FD K +A + D + ++ + + GH G + ++ ++
Sbjct: 297 ATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ 356
Query: 177 NPDLLSTASGDKTVRIWDART-QKSQIIATKGENI-NITWAPNGNTIAVGNKED 228
LL T S DKT RIWD +T Q Q++ + I + + GN + G+K++
Sbjct: 357 GNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/215 (24%), Positives = 96/215 (44%)
Query: 1 NVCPVIQFHTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWS 60
NV I F+ P + + +GS F CK+ T ++ H +++ ++++
Sbjct: 135 NVVYAIAFNNPYGDK---IATGS-FDKTCKLWSA----ETGKCYHTFRGHTAEIVCLSFN 186
Query: 61 CDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 120
+A+GS D + ++ + + G+ + V GH + L + T+ D + T S D T
Sbjct: 187 PQSTVVATGSMDTTAKLWDI-QSGE--EVVTLTGHLAEIISLSFD-TSGDRIITGSFDHT 242
Query: 121 VRIWDARTQKSQIMLASGSFDKSVAIFALDKK----GDLNKEVVY------------RGH 164
V +WDA T + L + S A+F+ D G ++K + GH
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 165 TGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK 199
+ C+ T L++TAS D T R+++A T+K
Sbjct: 303 DDEILDSCFDYTGK-LIATASADGTARVYNATTRK 336
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 51/189 (26%), Positives = 89/189 (47%)
Query: 27 LVCKIDDYVKHFNTHND--IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
LV ++ + ++ HN K +AH + +VA + G +GS+D++ ++
Sbjct: 66 LVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGE 125
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQK---------SQIML 135
+L+ GH V + ++ D ++T S DKT ++W A T K ++I+
Sbjct: 126 ELH---TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVC 182
Query: 136 ASGSFDKSV-AIFALD---KKGDLN--KEVV-YRGHTGSVDQLCWHATNPDLLSTASGDK 188
S + +V A ++D K D+ +EVV GH + L + T+ D + T S D
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD-TSGDRIITGSFDH 241
Query: 189 TVRIWDART 197
TV +WDA T
Sbjct: 242 TVVVWDAST 250
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 61/206 (29%), Positives = 103/206 (50%)
Query: 47 YQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHA 106
++AH + V SV +S DG+RL + S DKSV ++ +++K L + R HT V C
Sbjct: 98 FKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS--LNR-HTNWVR--CARF 152
Query: 107 TNPD--LLSTASGDKTVRIWDARTQKSQIMLAS--GS-----FDKS---VAIFALD---K 151
+ PD L+++ D+TVR+WD + + + GS F+ S +A D K
Sbjct: 153 S-PDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIK 211
Query: 152 KGDL--NKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT--- 205
D+ NK + Y+ H V+ +H + L+S S D T++I D + ++I T
Sbjct: 212 IWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLIS-GSSDSTIKILDLL--EGRLIYTLHG 268
Query: 206 -KGENINITWAPNGNTIAVGNKEDLV 230
KG + +T++ +G+ A G + V
Sbjct: 269 HKGPVLTVTFSRDGDLFASGGADSQV 294
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 53/211 (25%), Positives = 99/211 (46%)
Query: 45 KEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW 104
+ ++ H + ++ + ++LA+GS DKS+ I+ L K + V GHT + + +
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV---GHTDVITGVNF 68
Query: 105 HATNPDLLSTASGDKTVRIWDARTQ-KSQIMLASGSFDKSV--------AIFALDKK--- 152
A + L++++S D+TVR+W + +S + A + +SV + A D K
Sbjct: 69 -APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVK 127
Query: 153 --GDLNKEVVY--RGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQIIATK 206
G K+ +Y HT V C + PD L+++ D+TVR+WD + + I T
Sbjct: 128 VWGVERKKFLYSLNRHTNWVR--CARFS-PDGRLIASCGDDRTVRLWDTSSHQCINIFTD 184
Query: 207 --GENINITWAPNGNTIAVGNKEDLVTFIDV 235
G + + +G IA ++ + D+
Sbjct: 185 YGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 53/191 (27%), Positives = 93/191 (48%)
Query: 27 LVCKIDDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKG 84
L C D V++++ + + Y+ H V V S ++ S D++ +++ +
Sbjct: 370 LSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTY 429
Query: 85 DLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASG------ 138
L +Y GH VD + +H N + ++T S DKTVR+W R Q + + L +G
Sbjct: 430 PLR---LYAGHLSDVDCVKFHP-NSNYIATGSTDKTVRLWSTR-QGASVRLFTGHRGPVL 484
Query: 139 --SFD---KSVAIFALDKK--------GDLNKEVVYRGHTGSVDQLCWHATNPDLLSTAS 185
+F K +A D++ G L K++ RGHT ++ L + + + L+++AS
Sbjct: 485 TLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDL--RGHTDTISSLSF-SQDSSLVASAS 541
Query: 186 GDKTVRIWDAR 196
D TVR+WD R
Sbjct: 542 MDNTVRVWDIR 552
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 93 RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSF---DKSVAIFAL 149
RGH+G V + + LLS S D TVR WD ++ + ++ ++ D V+ +L
Sbjct: 351 RGHSGPVYRTAFLTDASGLLS-CSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSL 409
Query: 150 -------DKKGDLNKEV------VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 196
D+ L +Y GH VD + +H N + ++T S DKTVR+W R
Sbjct: 410 YFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHP-NSNYIATGSTDKTVRLWSTR 468
Query: 197 TQKSQIIAT--KGENINITWAPNGNTIAVGNKEDLVTFIDV 235
S + T +G + + ++PNG +A ++ + D+
Sbjct: 469 QGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDL 509
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 54/196 (27%), Positives = 90/196 (45%)
Query: 23 SQFHLVCKI--DDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFAL 80
S+ L C + ++ + ++IK + H V+ A+ D L S S D +V +
Sbjct: 324 SKIRLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYW-- 381
Query: 81 DKKGDLNKEVVYRGHTGSVDQLCWHA-TNPDLL--STASGDKTVRIWD-ARTQKSQIM-- 134
D K N V+YRGH V W +P L STAS D+T R+W ART ++
Sbjct: 382 DLKSFTNT-VLYRGHAYPV----WDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAG 436
Query: 135 ----------------LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP 178
+A+GS DK+V +++ + + ++ GH G V L + + N
Sbjct: 437 HLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVR---LFTGHRGPVLTLAF-SPNG 492
Query: 179 DLLSTASGDKTVRIWD 194
L++A D+ +++WD
Sbjct: 493 KYLASAGEDQRLKLWD 508
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 118 (46.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/88 (31%), Positives = 53/88 (60%)
Query: 49 AHGSKVHSVAWSCDGRRLASGSFDKSVAIFALD--KKGDLNKEVVYRGHTGSVDQLCW-H 105
AH +H V++ G+RLA+ S D+ + ++ + +K +L+ E ++ H+GSV +L W H
Sbjct: 10 AHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSAE--WKAHSGSVWKLAWAH 67
Query: 106 ATNPDLLSTASGDKTVRIWD-ARTQKSQ 132
++++ S D+TV IW+ + +K Q
Sbjct: 68 PEYGQVIASCSFDRTVCIWEESEDEKGQ 95
Score = 66 (28.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 163 GHTGSVDQLCWHATNPD----LLSTASGDKTVRIWDARTQKSQI----IATKGENINITW 214
G + ++ +CW A N L++TAS D VRIW + KS++ + K ++ + W
Sbjct: 360 GGSRAIHDVCW-APNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVW 418
Query: 215 APNGN---TIAVGNKED 228
N TI + +D
Sbjct: 419 RVEWNITGTILASSGDD 435
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 115 (45.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 12 KSPEYKLLPSGSQFHLVCK----IDDYVKHFNTHNDIKEYQA---HGSKVHSVAWSCDGR 64
++ +Y++ S +H V K + DY K + KEY H +V +++S +GR
Sbjct: 170 QAKDYQV--SSQVYHNVLKNFSFLSDY-KADPSELPTKEYHVFHDHSDEVWQISYSHNGR 226
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVVYR--GHTGSVDQLCWHATNPDLLSTASGDKTVR 122
LAS S DK+ IF + +N + V+R GH +V + W + LLS S DK+V
Sbjct: 227 YLASASKDKTAIIFDV-----VNLKRVFRLIGHIDTVAYIRWSPDDRYLLS-CSCDKSVI 280
Query: 123 IWDART 128
+WDA T
Sbjct: 281 LWDAFT 286
Score = 70 (29.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 130 KSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKT 189
K + SGS D + I+ + G L + GH V+ + ++ +P ++A D T
Sbjct: 438 KDDTFVLSGSEDDKIRIWHRES-GKLLATL--SGHVKCVNYVAYNPVDPYQFASAGDDNT 494
Query: 190 VRIW 193
VRIW
Sbjct: 495 VRIW 498
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 161 YRGHT-GS-VDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIAT 205
Y GH G+ + C+ + + + S D +RIW + K ++AT
Sbjct: 421 YMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGK--LLAT 465
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 61/218 (27%), Positives = 103/218 (47%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT ++ L
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKP---NCVMSLTGHTTPIESL 69
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
A +L+ S ++R+WD RT K+ I +ASGS D
Sbjct: 70 QISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTD 128
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQKSQ 201
+ ++ + +KG + K Y+ HT +V L + +PD L++A+ D TV++WD K
Sbjct: 129 IKLWDVRRKGCIFK---YKSHTQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGKVM 182
Query: 202 IIATKGEN-INIT-WAPNGNTIAVGNKEDLVTFIDVVK 237
T +N+ + P+ +A G+ + + F D+ K
Sbjct: 183 FEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 66 LASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 125
+ S S D++V I+ + N + GH V +H T DL+++AS D+TVR+WD
Sbjct: 110 IISASDDQTVRIWNWQSR---NSIAILTGHNHYVMCAQFHPTE-DLVASASLDQTVRVWD 165
Query: 126 ARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV--VYRGHTGSVDQLCWHATNPDLLST 183
+ + M G+ + + G + V V GH V+ + +H TNP L+S
Sbjct: 166 ISGLRKKQMPGGGAPSRPTGGQQAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVS- 224
Query: 184 ASGDKTVRIWDARTQKS-QIIATKGENINIT---WAPNGNTIAVGNKED 228
S D+ V+IW K+ ++ + +G N++ + PN + I + N ED
Sbjct: 225 GSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLI-LSNSED 272
Score = 117 (46.2 bits), Expect = 0.0010, P = 0.0010
Identities = 56/212 (26%), Positives = 93/212 (43%)
Query: 32 DDYVKHFN--THNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89
D V+ +N + N I H V + +AS S D++V ++ D G K+
Sbjct: 116 DQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVW--DISGLRKKQ 173
Query: 90 VVYRGH----TGSVDQLCWHATNPDLLSTASG-DKTVRIWDARTQKSQIMLASGSFDKSV 144
+ G TG + + + G D+ V W A + I L SGS D+ V
Sbjct: 174 MPGGGAPSRPTGGQQAELFGQPDAVVKHVLEGHDRGVN-WVAFHHTNPI-LVSGSDDRQV 231
Query: 145 AIFALD--KKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKS-Q 201
I+ + K +L+ RGH +V + +H N DL+ + S DK++R+WD + + S
Sbjct: 232 KIWRYNETKAWELDS---CRGHYNNVSSVIFHP-NADLILSNSEDKSIRVWDMQKRTSLH 287
Query: 202 IIATKGENINITWA-PNGNTIAVGNKEDLVTF 232
+ + E + A P+ N A G+ +V F
Sbjct: 288 VFRHENERFWVLAAHPSLNMFAAGHDNGMVVF 319
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 124 (48.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 30/95 (31%), Positives = 55/95 (57%)
Query: 44 IKEYQAHGSKVHSVAWS-CDGRRLA-SGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVD 100
++ ++ H +V+SV WS G +L SGS+D++V ++ D + K + +RGH +
Sbjct: 104 LQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLW--DPT--VGKSLCTFRGHESVIY 159
Query: 101 QLCWHATNPDLLSTASGDKTVRIWDARTQKSQIML 135
W P +++SGD+T+RIWD +T +I++
Sbjct: 160 STIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVV 194
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 63 GRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCW---HATNPDLLSTASGDK 119
G RL SFD + +F D N E V +G W AT P + +
Sbjct: 57 GLRLFR-SFDWNDGLF--DVTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQE 113
Query: 120 TVRI-WDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEV-VYRGHTGSVDQLCWHATN 177
+ W ++T+ Q+++ SGS+D++V ++ D + K + +RGH + W
Sbjct: 114 VYSVDW-SQTRGEQLVV-SGSWDQTVKLW--DPT--VGKSLCTFRGHESVIYSTIWSPHI 167
Query: 178 PDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAP-NGNTIAVG 224
P +++SGD+T+RIWD +T +I+ A + E ++ W N N + G
Sbjct: 168 PGCFASSSGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTG 217
Score = 53 (23.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 134 MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 193
+LAS S+D +V + K L + V + HT L +P ++ + D+T++I+
Sbjct: 257 VLASCSYDFTVRFWNFSKPDPLLETVEH--HTEFTCGLDLSLQSPTQVADCAWDETIKIY 314
Query: 194 D 194
D
Sbjct: 315 D 315
Score = 51 (23.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 163 GHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
GHT ++ ++ + + +L++ S D TVR W+
Sbjct: 240 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWN 271
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 139 (54.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 27 LVCKIDD-YVKHFNT-----HNDIKEYQAHGSKVHSVAWSCDGR-RLASGSFDKSVAIFA 79
L+ I D VK ++T N I+ +Q H +V SV ++ R + S+D +V ++A
Sbjct: 76 LIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWA 135
Query: 80 LDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGS 139
+D+ + ++ H V Q W+ + D+ ++ASGD T+RIWD R S +++ +
Sbjct: 136 MDRPASVR---TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHD 192
Query: 140 FD 141
F+
Sbjct: 193 FE 194
Score = 111 (44.1 bits), Expect = 0.00072, P = 0.00072
Identities = 38/147 (25%), Positives = 66/147 (44%)
Query: 107 TNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTG 166
+NP + S + V+ D + L S S+D +V ++A+D+ + ++ H
Sbjct: 96 SNP-IRSFQEHAREVQSVDYNPTRRDSFLTS-SWDDTVKLWAMDRPASVR---TFKEHAY 150
Query: 167 SVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII--ATKGENINITWAPNGNTIAVG 224
V Q W+ + D+ ++ASGD T+RIWD R S +I A E ++ W + I
Sbjct: 151 CVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILAT 210
Query: 225 NKEDLVTFIDVVKSLPPRERTLTSRGH 251
+ D + V+S L G+
Sbjct: 211 SSVDKTVKVWDVRSYRVPLAVLNGHGY 237
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 133 (51.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 53/178 (29%), Positives = 89/178 (50%)
Query: 44 IKEYQAHGSKVHS-VAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQL 102
++E AH S V S V GR LA+G D V +++++K N + GHT V+ +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVESV 73
Query: 103 CWHATNPDLLSTASGDKTVRIWDA------RT---QKSQI----------MLASGSFDKS 143
+ T +L+ S ++R+WD RT K+ I +ASGS D +
Sbjct: 74 RLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 132
Query: 144 VAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPD--LLSTASGDKTVRIWDARTQK 199
+ ++ + +KG + + YRGH+ +V L + +PD L++A+ D TV++WD K
Sbjct: 133 IKLWDIRRKGCVFR---YRGHSQAVRCLRF---SPDGKWLASAADDHTVKLWDLTAGK 184
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 140 (54.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/185 (30%), Positives = 81/185 (43%)
Query: 9 HTPKSPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRL 66
HT K P+G ++ D +K + ++ E G K + VAWS D R L
Sbjct: 71 HTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
Query: 67 ASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNP--DLLSTASGDKTVRIW 124
SGS DK++ ++ L L +GH+ V C + NP +L+ + S D++VRIW
Sbjct: 130 VSGSDDKTLKVWELSTGKSLK---TLKGHSNYV--FCCNF-NPQSNLIVSGSFDESVRIW 183
Query: 125 DARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC--WHATNPDLLS 182
D RT K L + S S F D G L +V + S D LC W + L
Sbjct: 184 DVRTGKCLKTLPAHSDPVSAVHFNRD--GSL---IV----SSSYDGLCRIWDTASGQCLK 234
Query: 183 TASGD 187
T D
Sbjct: 235 TLIDD 239
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 50 HGSKVHSVAWSCDGRRLASGSFDKSVAIF-ALDKKGDLNKEVVYRGHTGSVDQLCWHATN 108
H V +V +S +G LAS S DK + I+ A D G K + GH + + W +++
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTI--SGHKLGISDVAW-SSD 125
Query: 109 PDLLSTASGDKTVRIWDARTQKS-------------------QIMLASGSFDKSVAIFAL 149
LL + S DKT+++W+ T KS ++ SGSFD+SV I+ +
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 150 DKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKGEN 209
+ G K + H+ V + ++ L+ ++S D RIWD T Q + T ++
Sbjct: 186 -RTGKCLKTLP--AHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWD--TASGQCLKTLIDD 239
Query: 210 IN-----ITWAPNGNTIAVGNKEDLVTFIDVVK 237
N + ++PNG I ++ + D K
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 272
>ASPGD|ASPL0000047573 [details] [associations]
symbol:AN1645 species:162425 "Emericella nidulans"
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0004252 "serine-type
endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 EMBL:BN001307 eggNOG:COG2319
EMBL:AACD01000026 InterPro:IPR003014 Pfam:PF00024
RefSeq:XP_659249.1 ProteinModelPortal:Q5BCT5
EnsemblFungi:CADANIAT00008283 GeneID:2875320 KEGG:ani:AN1645.2
Uniprot:Q5BCT5
Length = 323
Score = 139 (54.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
+KH + I E+ H S SVA++ DG R ASGS D+SV + D K +KE+ +G
Sbjct: 196 MKHVDEVRKIVEFAGHASDTDSVAFAPDGNRFASGSADESVRFW--DIKTQSSKEL--KG 251
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDART 128
HT V + + ++N L++ + +RIWD T
Sbjct: 252 HTDKVSSVAF-SSNGKYLASEISNSMIRIWDGET 284
>MGI|MGI:2183448 [details] [associations]
symbol:Coro6 "coronin 6" species:10090 "Mus musculus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2183448 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 EMBL:AL607072
GeneTree:ENSGT00550000074317 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 ChiTaRS:CORO6 EMBL:AB070894
EMBL:AB070895 EMBL:AB070896 EMBL:AK158179 IPI:IPI00120764
IPI:IPI00263646 IPI:IPI00648746 IPI:IPI00974745 RefSeq:NP_624354.1
RefSeq:NP_624355.1 RefSeq:NP_624356.1 UniGene:Mm.33477
ProteinModelPortal:Q920M5 SMR:Q920M5 PhosphoSite:Q920M5
PaxDb:Q920M5 PRIDE:Q920M5 Ensembl:ENSMUST00000021190
Ensembl:ENSMUST00000079770 Ensembl:ENSMUST00000102493
Ensembl:ENSMUST00000108390 Ensembl:ENSMUST00000108391 GeneID:216961
KEGG:mmu:216961 UCSC:uc007kgq.1 UCSC:uc007kgr.1 UCSC:uc007kgs.1
OMA:PFYDADS NextBio:375460 Bgee:Q920M5 CleanEx:MM_CORO6
Genevestigator:Q920M5 GermOnline:ENSMUSG00000020836 Uniprot:Q920M5
Length = 471
Score = 104 (41.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKT 189
++AS S D +V ++ + ++ + V+ GH+ V L WH T ++L +A GD
Sbjct: 96 VIASASDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTARNVLLSAGGDNV 155
Query: 190 VRIWDARTQKSQIIATKGE---NI--NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
+ IW+ T +++ + + ++ ++ W NG+ +A K+ + ID KS ER
Sbjct: 156 IIIWNVGT--GEVLLSLDDIHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKSQVVAER 213
Query: 245 TLTSRG 250
G
Sbjct: 214 ARPHEG 219
Score = 81 (33.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K + GHTG V + W N +++++AS D TV +W
Sbjct: 61 VLPLAKTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVW 109
>UNIPROTKB|F1SGX1 [details] [associations]
symbol:CHAF1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:CU638724 ProteinModelPortal:F1SGX1 Ensembl:ENSSSCT00000013188
Uniprot:F1SGX1
Length = 559
Score = 138 (53.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 65 RLASGSFDKSVAIFALDKKGDLNKEVV-----YRGHTGSVDQLCWHATNPDLLSTASGDK 119
RLAS D +V I+ ++K D K +V HT +V+ + + + N ++L++ D
Sbjct: 31 RLASAGVDTTVRIWKVEKGPD-GKAIVEFLSNLARHTKAVNVVRF-SPNGEILASGGDDA 88
Query: 120 TVRIWDARTQKSQIMLASGSFDKSVAIFALDKKGDLNKEVV--YRGHTGSVDQLCWHATN 177
+ +W K +A D++ L+K+ N VV RGH V +CW A +
Sbjct: 89 VILLWKVNDNKEPEQIAFQDEDEA----QLNKE---NWTVVKTLRGHLEDVYDICW-AAD 140
Query: 178 PDLLSTASGDKTVRIWD-ARTQKSQIIATKGENIN-ITWAPNGNTIA 222
+++++AS D T IWD ++ QK I + +TW P G +A
Sbjct: 141 GNVMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVA 187
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 9/41 (21%), Positives = 23/41 (56%)
Query: 211 NITWAPNGNTIAVGNKEDLVTFIDVVKS---LPPRERTLTS 248
+I+W+ +G +A+ + + +F+ K +P +E+ + S
Sbjct: 353 DISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLS 393
>RGD|708560 [details] [associations]
symbol:Coro6 "coronin 6" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:708560 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 OMA:PFYDADS EMBL:AF140359
EMBL:BC098656 IPI:IPI00200600 RefSeq:NP_620815.2 UniGene:Rn.28432
ProteinModelPortal:Q920J3 SMR:Q920J3 PhosphoSite:Q920J3
PRIDE:Q920J3 Ensembl:ENSRNOT00000019759 GeneID:245982
KEGG:rno:245982 InParanoid:Q920J3 NextBio:623280
ArrayExpress:Q920J3 Genevestigator:Q920J3
GermOnline:ENSRNOG00000014496 Uniprot:Q920J3
Length = 472
Score = 104 (41.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 134 MLASGSFDKSVAIFALDKKG---DLNKEVV-YRGHTGSVDQLCWHATNPDLLSTASGDKT 189
++AS S D +V ++ + ++ + V+ GH+ V L WH T ++L +A GD
Sbjct: 96 VIASASDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTARNVLLSAGGDNV 155
Query: 190 VRIWDARTQKSQIIATKGE---NI--NITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRER 244
+ IW+ T +++ + + ++ ++ W NG+ +A K+ + ID KS ER
Sbjct: 156 IIIWNVGT--GEVLLSLDDIHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKSQVVAER 213
Query: 245 TLTSRG 250
G
Sbjct: 214 FAAHEG 219
Score = 81 (33.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 77 IFALDKKGDLNKEV-VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIW 124
+ L K G ++K + GHTG V + W N +++++AS D TV +W
Sbjct: 61 VLPLAKTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVW 109
>UNIPROTKB|F1S2K2 [details] [associations]
symbol:UTP15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GeneTree:ENSGT00390000004228
OMA:QFEGHTK EMBL:CU694283 Ensembl:ENSSSCT00000015368 Uniprot:F1S2K2
Length = 518
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 55/198 (27%), Positives = 95/198 (47%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQL 102
+++++ H VH+V ++ D + SG+ D +V ++ + +KE++ ++ H+ V
Sbjct: 115 LRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN----SKEILTFKEHSDYVRCG 170
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFA----LDKKG----- 153
C NPDL T S D TV+++DART +S I + G +SV +F L G
Sbjct: 171 CASKLNPDLFVTGSYDHTVKMFDARTNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVK 230
Query: 154 --DLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG 207
D+ K V + H +V LC ++ LLS S D+ V+++ + K
Sbjct: 231 VWDVLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLS-GSLDRKVKVYSTTSYKVVHSFDYA 289
Query: 208 ENI-NITWAPNGNTIAVG 224
+I ++ A TI VG
Sbjct: 290 ASILSLALAHEDETIVVG 307
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 56/223 (25%), Positives = 106/223 (47%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V + + + I + Q H ++++ +S DG RL +GS D + I+ + L + +
Sbjct: 323 VYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCL---MTFTE 379
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDA-RTQKSQIMLASGSFDKSVAIFALDKKG 153
HT +V Q+ + A +L ++S D T+R WD R + + A+ + A+D G
Sbjct: 380 HTSAVTQVQF-AKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNC--LAVDPSG 436
Query: 154 DL----NKEV--VY-------------RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
++ +++ +Y GH G + L + N +L++AS DKT+RIW+
Sbjct: 437 EVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKEN-SILASASWDKTIRIWN 495
Query: 195 --ARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
+R Q + I + + + +T P+ +AV + VT D+
Sbjct: 496 IFSRNQTVEPIEIQSDALCLTMRPDCKELAVSTLDGHVTIFDI 538
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 56/223 (25%), Positives = 106/223 (47%)
Query: 35 VKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRG 94
V + + + I + Q H ++++ +S DG RL +GS D + I+ + L + +
Sbjct: 323 VYEWQSESYILKQQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCL---MTFTE 379
Query: 95 HTGSVDQLCWHATNPDLLSTASGDKTVRIWDA-RTQKSQIMLASGSFDKSVAIFALDKKG 153
HT +V Q+ + A +L ++S D T+R WD R + + A+ + A+D G
Sbjct: 380 HTSAVTQVQF-AKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNC--LAVDPSG 436
Query: 154 DL----NKEV--VY-------------RGHTGSVDQLCWHATNPDLLSTASGDKTVRIWD 194
++ +++ +Y GH G + L + N +L++AS DKT+RIW+
Sbjct: 437 EVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKEN-SILASASWDKTIRIWN 495
Query: 195 --ARTQKSQIIATKGENINITWAPNGNTIAVGNKEDLVTFIDV 235
+R Q + I + + + +T P+ +AV + VT D+
Sbjct: 496 IFSRNQTVEPIEIQSDALCLTMRPDCKELAVSTLDGHVTIFDI 538
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V S+ W+ DG LA+GS+D I+ D G+L + H G + L W+ +LS
Sbjct: 237 VTSLDWNSDGTLLATGSYDGFARIWTED--GNLASTLGQ--HKGPIFALKWNKKGNYILS 292
Query: 114 TASGDKTVRIWDART--QKSQIMLASG-SFD---KSVAIFA---LDK-----KGDLNKEV 159
A DKT IWDA T K Q S + D ++ FA D + ++ V
Sbjct: 293 -AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPV 351
Query: 160 -VYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR--TQKSQIIATKGENINITWAP 216
++GHT V+ + W + LL++ S D T++IW + T + A E I W+P
Sbjct: 352 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 410
Query: 217 NG 218
G
Sbjct: 411 TG 412
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 38/115 (33%), Positives = 60/115 (52%)
Query: 13 SPEYKLLPSGSQFHLVCKIDDYVKHFNTHNDIKEYQAHGSKVHSVAWSCDGRRLASGSFD 72
+P ++ + + F ++ D + H K H V+SVA+S DG+ LASGSFD
Sbjct: 417 NPNSNIMLASASFDSTVRLWDVDRGVCIHTLTK----HQEPVYSVAFSPDGKYLASGSFD 472
Query: 73 KSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDAR 127
K V I+ + G L YRG TG + ++CW+A D + ++ D +V + D R
Sbjct: 473 KCVHIWNT-QSGTLVHS--YRG-TGGIFEVCWNARG-DKVGASASDGSVCVLDLR 522
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 45/142 (31%), Positives = 66/142 (46%)
Query: 87 NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAI 146
NK V RGH V W+ + DLL++ SGD T RIW+ + SGS + V
Sbjct: 169 NKATVLRGHESEVFICAWNPVS-DLLASGSGDSTARIWNLNENSN-----SGS-TQLVLR 221
Query: 147 FALDKKG-DL--NKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQII 203
+ + G D+ NK+V S+D W++ LL+T S D RIW T+ +
Sbjct: 222 HCIREGGHDVPSNKDVT------SLD---WNSDGT-LLATGSYDGFARIW---TEDGNLA 268
Query: 204 ATKGEN----INITWAPNGNTI 221
+T G++ + W GN I
Sbjct: 269 STLGQHKGPIFALKWNKKGNYI 290
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 63/229 (27%), Positives = 95/229 (41%)
Query: 54 VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLS 113
V+SV WS +G+RL +G F L N E + + H ++ L W A+N L
Sbjct: 136 VYSVCWSPEGKRLITGC---QTGEFTLWNGTAFNFETILQAHDSAIRALKW-ASNEQWLL 191
Query: 114 TASGDKTVRIWDARTQKSQIM----------LASGSFDKSVAIFALD---KKGDL---NK 157
+A V+ W + + LA D A + D + D +
Sbjct: 192 SADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTE 251
Query: 158 EVVYRGHTGSVDQLCWHATNPDLLSTASGD--KTVRIWDARTQKSQIIATKGEN----IN 211
E V RGH V + WH T L++T S D + V+IWD ++ +AT E+ +
Sbjct: 252 ERVLRGHGAEVRCIDWHPTK-GLIATGSRDTQQPVKIWDPKS--GSCLATLQEHKSSVMA 308
Query: 212 ITWAPNGNTIAVGNKEDLVTFIDVVKSLPPRERTLTSRGHLMETRSL-W 259
+ + NGN + G ++ LV D+ R T R H E SL W
Sbjct: 309 VEFNKNGNWLLTGGRDHLVKMYDIRMMKEMR----TYRAHKKEVISLAW 353
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 60/191 (31%), Positives = 94/191 (49%)
Query: 32 DDYVKHFNTHNDIKEYQAHGSK--VHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKE 89
D VK ++T ++ G + V SV +S D + LAS S D +V I+ G L
Sbjct: 358 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT-GSLQHT 416
Query: 90 VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQ-------------KSQI--- 133
+ GH V + + + + LL++AS D TV+IWD T +S I
Sbjct: 417 L--EGHRDWVRSVIF-SHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH 473
Query: 134 ---MLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLCWHATNPDLLSTASGDKTV 190
+LAS S D++V I+ +K G +K + GH+ V + + + + LL++AS D+TV
Sbjct: 474 DSRLLASASDDRTVRIWDTEK-GS-HKHTL-EGHSSLVTSVSF-SHDSRLLASASNDQTV 529
Query: 191 RIWDARTQKSQ 201
RIWD + Q
Sbjct: 530 RIWDIEARSLQ 540
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVVYRGHTGSVDQLC 103
++ + H + V SV++S D R LAS S D++V I+ + G L + GH+ V +
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTET-GSLQHTL--EGHSDLVRSVI 345
Query: 104 WHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFD--KSVAIFALDKK-----GDLN 156
+ + + LL++AS D TV+IWD T Q L G D +SV IF+ D + D +
Sbjct: 346 F-SHDSRLLASAS-DSTVKIWDTGTGSLQHTL-EGHRDWVRSV-IFSHDSQLLASASDDS 401
Query: 157 KEVVYRGHTGSVDQLC-----W-----HATNPDLLSTASGDKTVRIWDARTQKSQ 201
++ TGS+ W + + LL++AS D TV+IWD T Q
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQ 456
>UNIPROTKB|B4DXK8 [details] [associations]
symbol:UTP15 "cDNA FLJ57656, highly similar to U3 small
nucleolar RNA-associated protein 15 homolog" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 HOGENOM:HOG000185028
HOVERGEN:HBG080690 EMBL:AC010279 UniGene:Hs.406703 HGNC:HGNC:25758
ChiTaRS:UTP15 IPI:IPI00967090 EMBL:AK302021 SMR:B4DXK8
STRING:B4DXK8 Ensembl:ENST00000508491 UCSC:uc011cso.1
Uniprot:B4DXK8
Length = 499
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 54/198 (27%), Positives = 95/198 (47%)
Query: 44 IKEYQAHGSKVHSVAWSCDGRRLASGSFDKSVAIFALDKKGDLNKEVV-YRGHTGSVDQL 102
+++++ H VH+V ++ D + SG+ D +V ++ + +KE++ ++ H+ V
Sbjct: 96 LRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPN----SKEILTFKEHSDYVRCG 151
Query: 103 CWHATNPDLLSTASGDKTVRIWDARTQKSQIMLASGSFDKSVAIFA----LDKKG----- 153
C NPDL T S D TV+++DART +S + + G +SV +F L G
Sbjct: 152 CASKLNPDLFITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVK 211
Query: 154 --DLNKE----VVYRGHTGSVDQLCWHATNPDLLSTASGDKTVRIWDARTQKSQIIATKG 207
D+ K V + H +V LC ++ LLS S D+ V+++ + K
Sbjct: 212 VWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLS-GSLDRKVKVYSTTSYKVVHSFDYA 270
Query: 208 ENI-NITWAPNGNTIAVG 224
+I ++ A TI VG
Sbjct: 271 ASILSLALAHEDETIVVG 288
WARNING: HSPs involving 501 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 264 0.00092 114 3 11 22 0.50 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 751
No. of states in DFA: 605 (64 KB)
Total size of DFA: 204 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.16u 0.10s 25.26t Elapsed: 00:00:02
Total cpu time: 25.25u 0.11s 25.36t Elapsed: 00:00:02
Start: Thu Aug 15 15:16:19 2013 End: Thu Aug 15 15:16:21 2013
WARNINGS ISSUED: 2