Query psy9319
Match_columns 432
No_of_seqs 497 out of 2716
Neff 8.6
Searched_HMMs 29240
Date Sat Aug 17 00:19:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 3.5E-27 1.2E-31 226.9 24.4 206 5-230 14-259 (304)
2 1vyh_C Platelet-activating fac 100.0 4.9E-27 1.7E-31 235.7 24.2 206 5-230 109-369 (410)
3 2pbi_B Guanine nucleotide-bind 99.9 2E-25 6.9E-30 219.5 26.9 208 5-227 65-354 (354)
4 1got_B GT-beta; complex (GTP-b 99.9 1.5E-25 5.1E-30 218.9 25.4 172 34-227 166-340 (340)
5 4ery_A WD repeat-containing pr 99.9 2.2E-25 7.6E-30 214.0 25.3 155 5-165 24-179 (312)
6 1vyh_C Platelet-activating fac 99.9 1.2E-25 4.2E-30 225.5 24.4 204 5-228 151-409 (410)
7 3ow8_A WD repeat-containing pr 99.9 1.3E-25 4.3E-30 218.1 23.4 196 5-228 123-319 (321)
8 3frx_A Guanine nucleotide-bind 99.9 5.9E-25 2E-29 212.9 23.6 204 5-231 18-228 (319)
9 1erj_A Transcriptional repress 99.9 1.6E-24 5.5E-29 215.9 26.2 210 6-230 125-389 (393)
10 1nr0_A Actin interacting prote 99.9 9.3E-25 3.2E-29 230.3 23.7 210 5-231 60-356 (611)
11 4gqb_B Methylosome protein 50; 99.9 1E-24 3.5E-29 214.2 22.2 198 6-231 84-290 (344)
12 4ery_A WD repeat-containing pr 99.9 7.9E-24 2.7E-28 203.2 27.2 155 5-165 66-222 (312)
13 4gqb_B Methylosome protein 50; 99.9 2.6E-24 8.9E-29 211.2 22.7 198 5-230 128-331 (344)
14 3frx_A Guanine nucleotide-bind 99.9 6.6E-24 2.2E-28 205.5 25.0 155 5-166 66-227 (319)
15 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.6E-24 1.2E-28 209.6 23.3 156 5-164 62-223 (345)
16 3ow8_A WD repeat-containing pr 99.9 1.9E-24 6.5E-29 209.8 21.0 198 5-230 81-279 (321)
17 2hes_X YDR267CP; beta-propelle 99.9 3.4E-24 1.2E-28 208.5 22.3 160 5-165 59-229 (330)
18 3fm0_A Protein CIAO1; WDR39,SG 99.9 5.1E-24 1.7E-28 208.6 22.6 196 6-229 18-224 (345)
19 1got_B GT-beta; complex (GTP-b 99.9 1.6E-23 5.4E-28 204.5 24.6 197 5-230 56-257 (340)
20 4aow_A Guanine nucleotide-bind 99.9 2.1E-23 7.1E-28 201.2 24.8 222 5-231 39-338 (340)
21 2xzm_R RACK1; ribosome, transl 99.9 2.5E-23 8.6E-28 203.2 24.6 152 5-164 77-242 (343)
22 1erj_A Transcriptional repress 99.9 3.7E-23 1.3E-27 206.1 25.3 199 5-232 65-289 (393)
23 2hes_X YDR267CP; beta-propelle 99.9 4.5E-23 1.6E-27 200.5 24.0 198 5-230 15-230 (330)
24 2pm7_B Protein transport prote 99.9 3.4E-23 1.2E-27 198.3 22.6 203 5-230 10-238 (297)
25 3iz6_a 40S ribosomal protein R 99.9 2.9E-23 9.8E-28 205.9 22.4 199 5-230 158-375 (380)
26 3dm0_A Maltose-binding peripla 99.9 5.8E-23 2E-27 219.6 24.7 216 5-229 431-692 (694)
27 2xzm_R RACK1; ribosome, transl 99.9 8.6E-23 2.9E-27 199.4 23.8 201 5-229 22-243 (343)
28 3dm0_A Maltose-binding peripla 99.9 2.9E-23 9.7E-28 221.9 21.6 206 5-232 383-594 (694)
29 3zwl_B Eukaryotic translation 99.9 3.9E-22 1.3E-26 193.8 27.1 207 5-232 33-348 (369)
30 3f3f_A Nucleoporin SEH1; struc 99.9 6.1E-23 2.1E-27 196.9 20.2 155 5-165 12-248 (351)
31 3ei3_B DNA damage-binding prot 99.9 9.1E-23 3.1E-27 201.3 21.7 207 4-230 118-382 (383)
32 1nr0_A Actin interacting prote 99.9 9.5E-23 3.2E-27 215.0 23.2 198 5-230 148-397 (611)
33 2ynn_A Coatomer subunit beta'; 99.9 2.2E-22 7.6E-27 193.3 23.6 168 5-186 98-271 (304)
34 4g56_B MGC81050 protein; prote 99.9 4.6E-23 1.6E-27 203.0 19.2 204 5-237 140-350 (357)
35 3dwl_C Actin-related protein 2 99.9 1.7E-23 5.8E-28 205.7 15.9 208 4-232 11-238 (377)
36 2ymu_A WD-40 repeat protein; u 99.9 2.2E-22 7.7E-27 208.9 23.7 191 5-227 386-577 (577)
37 4g56_B MGC81050 protein; prote 99.9 2.9E-23 1E-27 204.4 14.9 199 5-231 95-302 (357)
38 3vl1_A 26S proteasome regulato 99.9 1E-22 3.6E-27 202.8 18.9 199 6-232 99-324 (420)
39 3iz6_a 40S ribosomal protein R 99.9 1.2E-22 4E-27 201.5 18.6 205 5-230 67-329 (380)
40 1gxr_A ESG1, transducin-like e 99.9 2.9E-21 9.7E-26 185.5 27.4 156 4-165 97-254 (337)
41 4h5i_A Guanine nucleotide-exch 99.9 3.5E-22 1.2E-26 197.4 19.8 198 5-231 134-344 (365)
42 3mkq_A Coatomer beta'-subunit; 99.9 9E-22 3.1E-26 212.8 24.6 154 5-164 14-170 (814)
43 3k26_A Polycomb protein EED; W 99.9 1.4E-21 4.7E-26 189.9 23.5 156 5-165 19-191 (366)
44 3bg1_A Protein SEC13 homolog; 99.9 1.2E-22 4.3E-27 196.2 15.5 201 5-230 14-247 (316)
45 4e54_B DNA damage-binding prot 99.9 6.2E-23 2.1E-27 207.1 13.5 155 5-165 165-326 (435)
46 2aq5_A Coronin-1A; WD40 repeat 99.9 4.8E-22 1.6E-26 197.9 19.6 199 8-232 38-256 (402)
47 3vl1_A 26S proteasome regulato 99.9 3.6E-22 1.2E-26 198.9 18.7 199 4-230 139-365 (420)
48 1k8k_C P40, ARP2/3 complex 41 99.9 2.4E-22 8.1E-27 196.3 16.8 155 5-166 97-274 (372)
49 2pbi_B Guanine nucleotide-bind 99.9 1.5E-21 5E-26 191.9 22.3 156 5-166 155-315 (354)
50 3sfz_A APAF-1, apoptotic pepti 99.9 2.2E-21 7.7E-26 219.6 25.7 156 4-165 615-773 (1249)
51 3jrp_A Fusion protein of prote 99.9 3.5E-21 1.2E-25 188.0 23.4 201 5-231 12-241 (379)
52 4h5i_A Guanine nucleotide-exch 99.9 1.1E-21 3.9E-26 193.7 19.4 153 5-164 177-341 (365)
53 1r5m_A SIR4-interacting protei 99.9 1.8E-21 6E-26 192.8 20.7 183 34-229 229-424 (425)
54 2pm7_B Protein transport prote 99.9 2.3E-21 8E-26 185.4 20.8 197 5-229 54-284 (297)
55 4e54_B DNA damage-binding prot 99.9 4.3E-22 1.5E-26 200.9 16.2 198 5-230 120-327 (435)
56 1k8k_C P40, ARP2/3 complex 41 99.9 4.7E-21 1.6E-25 187.0 22.9 208 4-231 8-234 (372)
57 3lrv_A PRE-mRNA-splicing facto 99.9 2E-21 6.8E-26 189.6 19.8 204 6-231 78-293 (343)
58 3k26_A Polycomb protein EED; W 99.9 9E-22 3.1E-26 191.2 16.8 153 5-164 70-258 (366)
59 4aez_A CDC20, WD repeat-contai 99.9 9.4E-21 3.2E-25 188.7 24.3 208 4-234 134-384 (401)
60 4ggc_A P55CDC, cell division c 99.9 3E-20 1E-24 177.3 26.7 148 7-164 28-179 (318)
61 3dwl_C Actin-related protein 2 99.9 5.7E-22 1.9E-26 194.8 15.0 167 5-185 56-251 (377)
62 2j04_B YDR362CP, TAU91; beta p 99.9 6.8E-22 2.3E-26 204.8 16.2 203 5-230 208-428 (524)
63 3ei3_B DNA damage-binding prot 99.9 8.9E-21 3E-25 187.0 23.5 198 4-231 73-283 (383)
64 2aq5_A Coronin-1A; WD40 repeat 99.9 1.1E-21 3.9E-26 195.2 17.1 155 5-165 82-253 (402)
65 4a11_B DNA excision repair pro 99.9 1.5E-20 5E-25 185.4 24.3 211 4-234 99-369 (408)
66 2ymu_A WD-40 repeat protein; u 99.9 1.3E-20 4.5E-25 195.6 23.9 193 5-229 345-538 (577)
67 1sq9_A Antiviral protein SKI8; 99.9 6.7E-21 2.3E-25 188.0 20.3 169 5-182 122-330 (397)
68 2w18_A PALB2, fancn, partner a 99.9 9.7E-21 3.3E-25 183.3 19.6 199 6-228 113-355 (356)
69 3dw8_B Serine/threonine-protei 99.9 4.2E-21 1.4E-25 192.6 17.9 209 3-230 27-315 (447)
70 1gxr_A ESG1, transducin-like e 99.9 2E-20 6.8E-25 179.5 21.9 198 4-231 51-256 (337)
71 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6E-21 2E-25 193.2 18.6 164 6-183 104-280 (450)
72 4aow_A Guanine nucleotide-bind 99.9 3.4E-20 1.2E-24 178.6 22.8 180 38-231 24-247 (340)
73 3dw8_B Serine/threonine-protei 99.9 1.3E-20 4.5E-25 188.9 20.5 212 5-231 94-374 (447)
74 1r5m_A SIR4-interacting protei 99.9 4E-20 1.4E-24 183.1 23.4 200 5-234 109-365 (425)
75 3mmy_A MRNA export factor; mRN 99.9 2.7E-20 9.4E-25 180.6 21.5 118 5-128 40-163 (368)
76 4gq1_A NUP37; propeller, trans 99.9 2.6E-21 8.8E-26 192.9 14.1 210 14-232 98-350 (393)
77 2j04_B YDR362CP, TAU91; beta p 99.9 4.5E-21 1.5E-25 198.6 16.3 153 5-164 267-426 (524)
78 3jrp_A Fusion protein of prote 99.9 3.1E-20 1.1E-24 181.2 21.1 198 5-230 56-287 (379)
79 1sq9_A Antiviral protein SKI8; 99.9 4.9E-20 1.7E-24 181.8 22.4 157 4-175 186-396 (397)
80 3gre_A Serine/threonine-protei 99.9 2.8E-20 9.7E-25 186.7 20.9 217 5-232 112-361 (437)
81 3f3f_A Nucleoporin SEH1; struc 99.8 3.2E-20 1.1E-24 177.9 19.6 158 5-176 58-339 (351)
82 4gga_A P55CDC, cell division c 99.8 1.1E-19 3.8E-24 182.2 23.7 203 5-230 148-395 (420)
83 3i2n_A WD repeat-containing pr 99.8 2.8E-20 9.6E-25 180.2 18.7 201 4-231 65-292 (357)
84 2xyi_A Probable histone-bindin 99.8 2.8E-20 9.7E-25 187.4 19.2 200 5-230 129-353 (430)
85 3jro_A Fusion protein of prote 99.8 4.2E-20 1.4E-24 199.6 21.7 201 5-231 10-239 (753)
86 1pgu_A Actin interacting prote 99.8 1.7E-19 5.8E-24 187.9 25.4 122 43-165 151-282 (615)
87 3v7d_B Cell division control p 99.8 8.4E-20 2.9E-24 184.7 22.4 193 5-230 163-381 (464)
88 3odt_A Protein DOA1; ubiquitin 99.8 2.5E-19 8.7E-24 170.2 24.4 170 34-232 126-298 (313)
89 2pm9_A Protein WEB1, protein t 99.8 2.8E-20 9.4E-25 184.6 18.3 201 5-232 114-339 (416)
90 2xyi_A Probable histone-bindin 99.8 1.4E-19 4.7E-24 182.3 23.7 208 5-230 182-410 (430)
91 2pm9_A Protein WEB1, protein t 99.8 2.2E-20 7.5E-25 185.3 17.5 157 5-166 166-337 (416)
92 3zwl_B Eukaryotic translation 99.8 2.1E-19 7.2E-24 174.4 24.1 122 43-164 23-149 (369)
93 2vdu_B TRNA (guanine-N(7)-)-me 99.8 3.2E-20 1.1E-24 187.9 18.7 158 51-231 101-272 (450)
94 3bg1_A Protein SEC13 homolog; 99.8 8.1E-21 2.8E-25 183.4 13.7 200 5-229 58-292 (316)
95 2j04_A TAU60, YPL007P, hypothe 99.8 2.3E-20 8E-25 191.5 17.5 161 3-185 84-265 (588)
96 3mmy_A MRNA export factor; mRN 99.8 4.7E-20 1.6E-24 179.0 18.8 127 39-165 26-159 (368)
97 3gre_A Serine/threonine-protei 99.8 2E-20 6.7E-25 187.8 16.2 201 5-230 64-292 (437)
98 3odt_A Protein DOA1; ubiquitin 99.8 3E-19 1E-23 169.7 22.6 201 5-231 19-256 (313)
99 3i2n_A WD repeat-containing pr 99.8 6E-20 2.1E-24 177.9 17.7 202 5-231 19-244 (357)
100 2j04_A TAU60, YPL007P, hypothe 99.8 2.7E-20 9.3E-25 191.0 15.5 158 5-176 16-213 (588)
101 4aez_A CDC20, WD repeat-contai 99.8 7E-19 2.4E-23 175.1 25.3 192 8-230 97-293 (401)
102 1pgu_A Actin interacting prote 99.8 1.6E-19 5.4E-24 188.1 20.8 199 4-230 18-238 (615)
103 2oaj_A Protein SNI1; WD40 repe 99.8 4.6E-20 1.6E-24 203.0 17.2 166 5-185 436-675 (902)
104 3sfz_A APAF-1, apoptotic pepti 99.8 2.5E-19 8.4E-24 202.9 23.2 206 4-230 657-913 (1249)
105 2w18_A PALB2, fancn, partner a 99.8 9.9E-20 3.4E-24 176.3 16.5 138 20-164 196-355 (356)
106 3lrv_A PRE-mRNA-splicing facto 99.8 1.2E-19 4.2E-24 176.8 17.0 153 5-164 126-290 (343)
107 2oaj_A Protein SNI1; WD40 repe 99.8 7.8E-20 2.7E-24 201.1 17.2 206 5-231 18-243 (902)
108 3v7d_B Cell division control p 99.8 6.6E-19 2.2E-23 178.1 22.7 191 8-231 126-342 (464)
109 1p22_A F-BOX/WD-repeat protein 99.8 6.8E-19 2.3E-23 177.2 22.5 195 7-231 136-366 (435)
110 3jro_A Fusion protein of prote 99.8 2.6E-19 9E-24 193.3 20.5 198 5-230 54-285 (753)
111 4gga_A P55CDC, cell division c 99.8 2.1E-18 7.2E-23 172.9 24.5 196 6-230 107-310 (420)
112 3vu4_A KMHSV2; beta-propeller 99.8 8E-19 2.7E-23 172.4 20.8 132 33-165 82-270 (355)
113 4a11_B DNA excision repair pro 99.8 1.1E-18 3.8E-23 171.8 21.3 210 5-232 44-278 (408)
114 1yfq_A Cell cycle arrest prote 99.8 8.5E-20 2.9E-24 176.2 12.9 195 5-231 12-226 (342)
115 3mkq_A Coatomer beta'-subunit; 99.8 8.4E-19 2.9E-23 189.5 21.6 174 5-184 56-269 (814)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.9E-18 6.7E-23 174.1 22.1 191 12-230 125-348 (445)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3E-18 1E-22 172.7 22.1 200 5-231 160-392 (445)
118 1p22_A F-BOX/WD-repeat protein 99.8 5.5E-18 1.9E-22 170.5 22.3 192 5-234 214-418 (435)
119 1yfq_A Cell cycle arrest prote 99.8 1.1E-18 3.8E-23 168.3 14.6 203 5-231 57-283 (342)
120 3vu4_A KMHSV2; beta-propeller 99.8 5.4E-18 1.9E-22 166.4 18.4 120 45-164 188-334 (355)
121 1l0q_A Surface layer protein; 99.8 5.9E-17 2E-21 159.7 23.8 199 3-231 30-234 (391)
122 1l0q_A Surface layer protein; 99.8 6.3E-17 2.1E-21 159.4 22.8 196 5-230 74-275 (391)
123 4gq1_A NUP37; propeller, trans 99.8 4.5E-18 1.5E-22 169.4 14.1 167 5-185 137-359 (393)
124 4ggc_A P55CDC, cell division c 99.7 5.1E-17 1.7E-21 154.8 18.9 153 5-164 151-313 (318)
125 3bws_A Protein LP49; two-domai 99.7 6.3E-17 2.2E-21 161.6 20.1 198 5-230 123-334 (433)
126 2oit_A Nucleoporin 214KDA; NH2 99.7 2.2E-17 7.4E-22 167.1 14.7 147 5-157 93-263 (434)
127 3bws_A Protein LP49; two-domai 99.7 7.1E-16 2.4E-20 154.0 23.5 195 5-229 212-431 (433)
128 2oit_A Nucleoporin 214KDA; NH2 99.7 4.9E-17 1.7E-21 164.5 12.4 152 6-165 38-222 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.7E-15 6E-20 151.9 21.7 160 5-177 179-347 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.1E-14 3.9E-19 146.0 23.3 138 32-177 159-303 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.6 1E-14 3.5E-19 156.2 17.9 150 5-157 37-230 (741)
132 3vgz_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 129.4 21.7 164 6-182 90-270 (353)
133 3vgz_A Uncharacterized protein 99.5 6.7E-13 2.3E-17 128.1 21.8 163 7-182 143-311 (353)
134 1xfd_A DIP, dipeptidyl aminope 99.5 5.5E-14 1.9E-18 150.0 14.7 148 7-163 19-201 (723)
135 1pby_B Quinohemoprotein amine 99.5 6.1E-13 2.1E-17 127.2 19.6 164 6-182 83-318 (337)
136 2ojh_A Uncharacterized protein 99.5 3.8E-13 1.3E-17 125.6 16.5 148 5-161 42-199 (297)
137 1nir_A Nitrite reductase; hemo 99.5 1.9E-13 6.6E-18 141.9 15.8 167 5-185 324-525 (543)
138 2ojh_A Uncharacterized protein 99.5 1.3E-13 4.5E-18 128.7 13.1 148 6-157 130-293 (297)
139 2z3z_A Dipeptidyl aminopeptida 99.5 8.2E-14 2.8E-18 148.4 13.1 157 6-175 83-294 (706)
140 1xfd_A DIP, dipeptidyl aminope 99.5 1E-13 3.5E-18 147.9 13.3 155 7-164 63-287 (723)
141 1pby_B Quinohemoprotein amine 99.5 8.9E-13 3E-17 126.1 17.6 119 6-132 35-170 (337)
142 3u4y_A Uncharacterized protein 99.5 2.1E-12 7.2E-17 123.9 20.2 149 11-165 4-159 (331)
143 1nir_A Nitrite reductase; hemo 99.5 1.7E-12 5.7E-17 134.9 20.7 199 7-230 181-402 (543)
144 3u4y_A Uncharacterized protein 99.5 2.6E-12 9E-17 123.2 20.4 160 9-182 44-218 (331)
145 1ri6_A Putative isomerase YBHE 99.5 9.6E-13 3.3E-17 126.1 16.2 153 5-164 38-207 (343)
146 2ecf_A Dipeptidyl peptidase IV 99.4 5.5E-13 1.9E-17 142.7 14.4 150 6-164 110-319 (741)
147 3o4h_A Acylamino-acid-releasin 99.4 4.6E-13 1.6E-17 139.6 12.5 145 9-164 114-274 (582)
148 1jmx_B Amine dehydrogenase; ox 99.4 6E-12 2E-16 121.0 19.2 161 7-181 94-332 (349)
149 1jmx_B Amine dehydrogenase; ox 99.4 2.9E-12 1E-16 123.2 17.0 119 6-133 44-183 (349)
150 3o4h_A Acylamino-acid-releasin 99.4 7.2E-12 2.4E-16 130.6 20.2 201 5-228 65-274 (582)
151 3scy_A Hypothetical bacterial 99.4 9E-12 3.1E-16 121.4 19.7 151 6-161 156-332 (361)
152 1k32_A Tricorn protease; prote 99.4 1.9E-12 6.5E-17 144.5 16.2 150 6-165 297-460 (1045)
153 2z3z_A Dipeptidyl aminopeptida 99.4 1.9E-12 6.5E-17 137.9 15.4 153 5-164 121-340 (706)
154 1ri6_A Putative isomerase YBHE 99.4 1.4E-11 4.7E-16 118.0 19.9 155 3-162 127-304 (343)
155 1k32_A Tricorn protease; prote 99.4 3.9E-12 1.3E-16 141.9 17.4 153 6-166 339-502 (1045)
156 3hfq_A Uncharacterized protein 99.4 1.1E-11 3.7E-16 120.1 17.4 155 5-163 40-215 (347)
157 3hfq_A Uncharacterized protein 99.4 3.1E-11 1.1E-15 116.8 20.1 151 6-162 142-313 (347)
158 1z68_A Fibroblast activation p 99.4 1.9E-12 6.4E-17 138.3 11.9 140 8-156 19-189 (719)
159 3pe7_A Oligogalacturonate lyas 99.3 8.4E-11 2.9E-15 115.2 19.8 146 8-156 39-209 (388)
160 4a5s_A Dipeptidyl peptidase 4 99.3 1.3E-11 4.4E-16 132.8 14.2 148 7-164 19-200 (740)
161 1jof_A Carboxy-CIS,CIS-muconat 99.3 8.2E-11 2.8E-15 115.3 16.7 152 5-163 40-221 (365)
162 3azo_A Aminopeptidase; POP fam 99.3 7E-11 2.4E-15 124.8 16.6 155 5-162 130-319 (662)
163 3fvz_A Peptidyl-glycine alpha- 99.2 7.9E-10 2.7E-14 106.8 21.3 168 5-182 24-235 (329)
164 4a5s_A Dipeptidyl peptidase 4 99.2 1E-10 3.4E-15 125.8 16.3 142 10-154 67-278 (740)
165 1z68_A Fibroblast activation p 99.2 1.9E-11 6.5E-16 130.5 10.5 153 7-163 62-284 (719)
166 3azo_A Aminopeptidase; POP fam 99.2 1.4E-10 4.6E-15 122.5 15.5 140 13-158 87-264 (662)
167 1jof_A Carboxy-CIS,CIS-muconat 99.2 3.2E-10 1.1E-14 111.0 16.8 154 5-163 145-338 (365)
168 1q7f_A NHL, brain tumor CG1071 99.2 2.6E-09 8.9E-14 100.3 21.0 149 5-163 121-277 (286)
169 2gop_A Trilobed protease; beta 99.2 1.2E-09 4.1E-14 105.3 18.0 140 7-157 61-236 (347)
170 1xip_A Nucleoporin NUP159; bet 99.1 1.2E-09 4.2E-14 108.0 17.4 139 6-162 39-187 (388)
171 2oiz_A Aromatic amine dehydrog 99.1 2.8E-09 9.6E-14 104.6 19.7 163 9-181 54-343 (361)
172 1q7f_A NHL, brain tumor CG1071 99.1 5E-09 1.7E-13 98.3 20.7 150 6-163 78-235 (286)
173 3c5m_A Oligogalacturonate lyas 99.1 3.1E-10 1.1E-14 111.0 11.7 147 7-156 38-209 (396)
174 3scy_A Hypothetical bacterial 99.1 7.9E-09 2.7E-13 100.4 21.4 154 6-163 51-239 (361)
175 2dg1_A DRP35, lactonase; beta 99.1 6.8E-09 2.3E-13 99.6 19.6 142 5-155 6-154 (333)
176 2xdw_A Prolyl endopeptidase; a 99.1 2.1E-09 7.2E-14 114.8 17.6 156 7-165 127-319 (710)
177 3fvz_A Peptidyl-glycine alpha- 99.1 3E-09 1E-13 102.7 16.3 151 6-163 144-319 (329)
178 2gop_A Trilobed protease; beta 99.1 7.1E-09 2.4E-13 99.8 18.8 140 6-156 16-190 (347)
179 2dg1_A DRP35, lactonase; beta 99.0 1.4E-08 4.7E-13 97.4 20.4 153 6-164 46-211 (333)
180 2bkl_A Prolyl endopeptidase; m 99.0 3.6E-09 1.2E-13 112.8 16.0 155 6-165 122-303 (695)
181 3e5z_A Putative gluconolactona 99.0 1.3E-08 4.6E-13 96.1 17.8 152 5-164 28-200 (296)
182 3pe7_A Oligogalacturonate lyas 99.0 6.6E-09 2.3E-13 101.6 15.6 117 37-153 15-142 (388)
183 3no2_A Uncharacterized protein 99.0 1.9E-08 6.6E-13 94.9 17.8 149 6-165 38-194 (276)
184 3e5z_A Putative gluconolactona 99.0 2E-08 6.9E-13 94.8 16.9 148 5-157 115-278 (296)
185 2oiz_A Aromatic amine dehydrog 98.9 1.1E-08 3.7E-13 100.4 15.4 146 15-163 14-179 (361)
186 1xip_A Nucleoporin NUP159; bet 98.9 1.2E-08 4E-13 100.9 14.9 131 7-154 90-232 (388)
187 2bkl_A Prolyl endopeptidase; m 98.9 5.8E-09 2E-13 111.2 13.7 149 13-164 76-259 (695)
188 2xdw_A Prolyl endopeptidase; a 98.9 4.2E-08 1.4E-12 104.7 20.3 150 7-158 173-358 (710)
189 3c5m_A Oligogalacturonate lyas 98.9 1.6E-08 5.4E-13 98.8 14.5 141 10-155 147-302 (396)
190 1rwi_B Serine/threonine-protei 98.9 3.3E-08 1.1E-12 91.5 15.6 153 5-163 108-261 (270)
191 1rwi_B Serine/threonine-protei 98.8 9.1E-08 3.1E-12 88.5 17.1 152 5-164 67-220 (270)
192 3no2_A Uncharacterized protein 98.8 1.1E-07 3.8E-12 89.7 17.6 129 32-164 15-153 (276)
193 1qks_A Cytochrome CD1 nitrite 98.8 1.7E-07 5.9E-12 97.5 20.6 99 33-133 178-283 (567)
194 1yr2_A Prolyl oligopeptidase; 98.8 4.2E-08 1.4E-12 105.3 16.5 156 7-166 165-350 (741)
195 2mad_H Methylamine dehydrogena 98.8 7.5E-07 2.6E-11 87.8 21.6 163 9-180 70-356 (373)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 4E-07 1.4E-11 86.0 17.8 154 5-161 117-294 (314)
197 3dsm_A Uncharacterized protein 98.7 3.9E-07 1.3E-11 87.8 17.2 122 32-156 64-192 (328)
198 2z2n_A Virginiamycin B lyase; 98.7 2.7E-06 9.2E-11 79.3 21.4 149 5-163 15-168 (299)
199 3dsm_A Uncharacterized protein 98.7 3.1E-07 1.1E-11 88.5 15.0 155 5-177 84-256 (328)
200 3g4e_A Regucalcin; six bladed 98.6 9.5E-07 3.2E-11 83.7 17.1 149 5-155 98-261 (297)
201 2mad_H Methylamine dehydrogena 98.6 2.2E-06 7.6E-11 84.3 19.9 125 33-163 48-193 (373)
202 2z2n_A Virginiamycin B lyase; 98.6 6E-06 2.1E-10 76.9 21.2 151 5-164 57-211 (299)
203 3sjl_D Methylamine dehydrogena 98.6 1.9E-06 6.4E-11 84.9 18.0 149 11-164 39-206 (386)
204 3g4e_A Regucalcin; six bladed 98.6 5.2E-06 1.8E-10 78.5 20.0 159 5-181 54-236 (297)
205 3iuj_A Prolyl endopeptidase; h 98.6 2E-06 6.9E-11 91.6 18.6 155 6-165 130-313 (693)
206 2ghs_A AGR_C_1268P; regucalcin 98.5 4.4E-06 1.5E-10 80.3 19.3 148 5-156 134-292 (326)
207 3c75_H MADH, methylamine dehyd 98.5 1.5E-06 5E-11 87.0 16.0 165 9-181 122-409 (426)
208 1qks_A Cytochrome CD1 nitrite 98.5 1.3E-06 4.3E-11 90.9 16.0 105 61-166 164-275 (567)
209 3dr2_A Exported gluconolactona 98.5 3.6E-06 1.2E-10 79.9 16.8 151 5-164 45-222 (305)
210 1yr2_A Prolyl oligopeptidase; 98.5 5.8E-06 2E-10 88.6 20.3 151 8-162 212-389 (741)
211 3hrp_A Uncharacterized protein 98.5 2.5E-06 8.7E-11 85.0 15.7 151 5-163 131-295 (409)
212 3sjl_D Methylamine dehydrogena 98.5 1.8E-06 6.3E-11 85.0 13.9 106 58-165 38-168 (386)
213 3hrp_A Uncharacterized protein 98.4 1.1E-05 3.9E-10 80.2 19.6 151 4-163 218-407 (409)
214 2qc5_A Streptogramin B lactona 98.4 3.5E-05 1.2E-09 71.6 21.1 150 5-164 20-174 (300)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 1.1E-05 3.6E-10 76.1 17.5 152 4-163 17-204 (314)
216 3dr2_A Exported gluconolactona 98.4 6.1E-06 2.1E-10 78.3 15.8 148 5-157 131-298 (305)
217 3c75_H MADH, methylamine dehyd 98.4 6.5E-06 2.2E-10 82.3 16.5 141 14-160 82-242 (426)
218 2qc5_A Streptogramin B lactona 98.4 4E-05 1.4E-09 71.2 21.2 151 5-164 62-216 (300)
219 1mda_H Methylamine dehydrogena 98.4 5.6E-06 1.9E-10 81.2 15.6 166 9-182 69-354 (368)
220 1kb0_A Quinohemoprotein alcoho 98.3 1.1E-05 3.7E-10 85.8 17.5 142 33-182 284-515 (677)
221 2ghs_A AGR_C_1268P; regucalcin 98.3 3.6E-05 1.2E-09 73.8 19.7 149 5-164 90-258 (326)
222 2iwa_A Glutamine cyclotransfer 98.3 4.2E-05 1.4E-09 71.4 18.8 161 5-182 21-189 (266)
223 2qe8_A Uncharacterized protein 98.3 4.1E-05 1.4E-09 73.9 19.3 146 6-157 18-216 (343)
224 3iuj_A Prolyl endopeptidase; h 98.2 4.1E-05 1.4E-09 81.4 18.6 152 8-164 178-357 (693)
225 2qe8_A Uncharacterized protein 98.2 3.8E-05 1.3E-09 74.2 16.4 159 5-164 67-276 (343)
226 2hz6_A Endoplasmic reticulum t 98.2 1.2E-07 4.1E-12 93.2 -1.5 132 33-178 20-153 (369)
227 1mda_H Methylamine dehydrogena 98.2 7.7E-06 2.6E-10 80.2 11.4 139 17-164 32-192 (368)
228 1fwx_A Nitrous oxide reductase 98.2 1.8E-05 6.3E-10 81.5 14.1 132 31-164 174-359 (595)
229 1yiq_A Quinohemoprotein alcoho 98.2 6.5E-05 2.2E-09 79.9 18.7 141 33-181 276-512 (689)
230 2ece_A 462AA long hypothetical 98.1 8.9E-05 3E-09 73.9 17.7 154 9-164 142-350 (462)
231 3nok_A Glutaminyl cyclase; bet 98.1 0.00014 4.8E-09 67.4 17.0 157 5-182 55-218 (268)
232 3mbr_X Glutamine cyclotransfer 98.0 0.00067 2.3E-08 62.2 20.1 162 3-182 19-187 (243)
233 3nol_A Glutamine cyclotransfer 98.0 0.00021 7.2E-09 66.2 16.7 160 5-182 43-209 (262)
234 2hz6_A Endoplasmic reticulum t 98.0 5.9E-07 2E-11 88.2 -1.3 141 12-164 45-190 (369)
235 2ece_A 462AA long hypothetical 98.0 0.00019 6.4E-09 71.6 16.7 143 14-162 93-285 (462)
236 1npe_A Nidogen, entactin; glyc 97.9 0.0025 8.7E-08 58.6 22.6 162 5-182 79-246 (267)
237 2iwa_A Glutamine cyclotransfer 97.9 0.00042 1.4E-08 64.6 16.5 117 43-164 10-133 (266)
238 2xe4_A Oligopeptidase B; hydro 97.7 0.00018 6.3E-09 77.2 13.0 154 7-164 176-352 (751)
239 3nol_A Glutamine cyclotransfer 97.7 0.00079 2.7E-08 62.3 14.9 117 44-165 33-154 (262)
240 2ad6_A Methanol dehydrogenase 97.7 0.0019 6.4E-08 67.0 19.2 140 33-181 273-501 (571)
241 1npe_A Nidogen, entactin; glyc 97.7 0.0054 1.8E-07 56.3 20.5 151 8-164 39-196 (267)
242 1kv9_A Type II quinohemoprotei 97.6 0.00066 2.2E-08 71.9 15.2 141 33-181 271-495 (668)
243 1yiq_A Quinohemoprotein alcoho 97.6 0.0025 8.5E-08 67.6 19.7 102 31-132 182-345 (689)
244 3nok_A Glutaminyl cyclase; bet 97.6 0.0012 4E-08 61.2 14.4 117 43-165 44-163 (268)
245 1fwx_A Nitrous oxide reductase 97.6 0.00072 2.5E-08 69.6 14.1 133 33-166 113-308 (595)
246 2fp8_A Strictosidine synthase; 97.6 0.0052 1.8E-07 58.2 19.3 151 5-164 19-214 (322)
247 3mbr_X Glutamine cyclotransfer 97.5 0.0039 1.3E-07 57.1 16.7 117 44-165 11-132 (243)
248 1kb0_A Quinohemoprotein alcoho 97.5 0.0015 5.1E-08 69.2 15.1 79 74-153 457-537 (677)
249 3tc9_A Hypothetical hydrolase; 97.5 0.004 1.4E-07 62.1 17.4 149 6-163 138-298 (430)
250 3hxj_A Pyrrolo-quinoline quino 97.4 0.002 6.8E-08 60.6 13.3 132 33-172 118-250 (330)
251 3hxj_A Pyrrolo-quinoline quino 97.4 0.0026 8.9E-08 59.8 13.9 123 33-163 158-281 (330)
252 1flg_A Protein (quinoprotein e 97.3 0.016 5.6E-07 60.0 20.6 141 32-181 291-523 (582)
253 3qqz_A Putative uncharacterize 97.3 0.021 7.3E-07 52.6 19.1 153 1-159 22-197 (255)
254 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.009 3.1E-07 57.6 17.3 127 33-164 64-205 (376)
255 2p9w_A MAL S 1 allergenic prot 97.3 0.016 5.5E-07 55.3 18.2 152 8-165 16-214 (334)
256 2fp8_A Strictosidine synthase; 97.3 0.014 4.9E-07 55.1 18.0 154 5-162 126-309 (322)
257 1w6s_A Methanol dehydrogenase 97.2 0.018 6.1E-07 59.9 19.5 131 33-164 279-501 (599)
258 1ijq_A LDL receptor, low-densi 97.2 0.06 2E-06 50.9 21.2 111 53-164 77-193 (316)
259 3v64_C Agrin; beta propeller, 97.1 0.039 1.3E-06 53.1 19.4 112 53-164 116-232 (349)
260 2xe4_A Oligopeptidase B; hydro 97.1 0.015 5E-07 62.3 17.7 148 8-158 224-390 (751)
261 3v65_B Low-density lipoprotein 97.1 0.046 1.6E-06 53.4 19.9 131 34-164 140-275 (386)
262 2p4o_A Hypothetical protein; p 97.0 0.047 1.6E-06 51.2 18.9 120 43-165 23-146 (306)
263 4hw6_A Hypothetical protein, I 97.0 0.015 5E-07 58.1 15.8 150 5-163 139-301 (433)
264 3p5b_L Low density lipoprotein 97.0 0.12 4E-06 50.8 22.2 117 48-164 154-275 (400)
265 3v65_B Low-density lipoprotein 96.8 0.15 5.2E-06 49.6 21.4 124 49-181 198-325 (386)
266 4a2l_A BT_4663, two-component 96.8 0.058 2E-06 57.8 19.6 107 52-163 405-523 (795)
267 3qqz_A Putative uncharacterize 96.8 0.052 1.8E-06 50.0 16.5 111 47-158 21-143 (255)
268 3v64_C Agrin; beta propeller, 96.7 0.22 7.5E-06 47.8 21.0 107 50-158 156-267 (349)
269 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.032 1.1E-06 53.7 14.8 99 63-164 52-160 (376)
270 2p4o_A Hypothetical protein; p 96.7 0.14 4.9E-06 47.8 19.0 149 5-163 32-195 (306)
271 4a2l_A BT_4663, two-component 96.6 0.16 5.4E-06 54.4 20.9 111 52-165 356-479 (795)
272 1ijq_A LDL receptor, low-densi 96.5 0.58 2E-05 44.0 23.5 110 51-162 118-234 (316)
273 4hw6_A Hypothetical protein, I 96.5 0.046 1.6E-06 54.4 14.8 118 4-124 181-303 (433)
274 3kya_A Putative phosphatase; s 96.4 0.1 3.5E-06 52.7 17.1 148 8-161 142-336 (496)
275 3amr_A 3-phytase; beta-propell 96.4 0.12 4E-06 49.8 16.6 128 32-163 50-207 (355)
276 3p5b_L Low density lipoprotein 96.3 0.76 2.6E-05 44.9 22.6 122 51-181 200-327 (400)
277 2ad6_A Methanol dehydrogenase 96.3 0.027 9.2E-07 58.2 12.4 80 73-153 443-524 (571)
278 3m0c_C LDL receptor, low-densi 96.3 0.43 1.5E-05 51.1 21.8 114 51-164 469-587 (791)
279 3sov_A LRP-6, low-density lipo 96.2 0.83 2.8E-05 43.1 22.0 122 50-180 119-244 (318)
280 3sov_A LRP-6, low-density lipo 96.2 0.15 5.1E-06 48.4 16.2 111 54-164 80-195 (318)
281 3tc9_A Hypothetical hydrolase; 96.2 0.16 5.6E-06 50.3 17.0 118 5-125 179-301 (430)
282 3sre_A PON1, serum paraoxonase 96.2 0.29 9.8E-06 47.3 18.0 155 8-164 53-250 (355)
283 1kv9_A Type II quinohemoprotei 96.2 0.059 2E-06 56.8 14.2 133 32-164 127-331 (668)
284 1flg_A Protein (quinoprotein e 96.0 0.054 1.9E-06 56.1 13.0 79 73-152 465-545 (582)
285 3v9f_A Two-component system se 95.9 0.29 1E-05 52.2 18.4 108 52-164 449-566 (781)
286 4a0p_A LRP6, LRP-6, low-densit 95.8 0.66 2.2E-05 48.4 20.2 154 6-164 38-195 (628)
287 3v9f_A Two-component system se 95.8 0.27 9.1E-06 52.5 17.5 108 52-164 406-522 (781)
288 3pbp_A Nucleoporin NUP82; beta 95.8 0.28 9.6E-06 48.3 15.8 103 54-158 67-204 (452)
289 2p9w_A MAL S 1 allergenic prot 95.7 0.28 9.6E-06 46.7 15.3 125 48-172 8-176 (334)
290 3amr_A 3-phytase; beta-propell 95.7 1.2 4.1E-05 42.7 19.8 120 53-181 128-271 (355)
291 3m0c_C LDL receptor, low-densi 95.5 2 6.8E-05 46.0 22.6 122 50-181 511-639 (791)
292 2xbg_A YCF48-like protein; pho 95.2 0.75 2.6E-05 43.4 16.7 105 51-159 203-315 (327)
293 1w6s_A Methanol dehydrogenase 95.1 0.26 9E-06 51.1 13.9 78 73-151 452-531 (599)
294 1n7d_A LDL receptor, low-densi 95.1 0.032 1.1E-06 59.2 7.1 110 55-164 455-569 (699)
295 1k3i_A Galactose oxidase precu 95.0 0.091 3.1E-06 55.1 10.5 109 57-165 190-322 (656)
296 1n7d_A LDL receptor, low-densi 95.0 0.065 2.2E-06 56.8 9.4 120 53-181 496-621 (699)
297 1k3i_A Galactose oxidase precu 95.0 0.079 2.7E-06 55.5 9.9 148 8-156 290-476 (656)
298 3s94_A LRP-6, low-density lipo 94.9 1.8 6.2E-05 44.9 20.0 154 6-164 41-200 (619)
299 3pbp_A Nucleoporin NUP82; beta 94.6 1 3.5E-05 44.4 15.7 104 61-166 29-158 (452)
300 1tl2_A L10, protein (tachylect 94.6 0.52 1.8E-05 42.2 12.5 139 5-158 41-202 (236)
301 1cru_A Protein (soluble quinop 94.5 1.1 3.7E-05 44.7 16.2 103 53-155 27-163 (454)
302 3das_A Putative oxidoreductase 94.4 1 3.5E-05 43.2 15.3 108 48-155 27-159 (347)
303 2ism_A Putative oxidoreductase 94.4 0.81 2.8E-05 43.8 14.8 99 53-154 31-153 (352)
304 3a9g_A Putative uncharacterize 94.2 0.65 2.2E-05 44.6 13.6 101 52-154 28-153 (354)
305 2xbg_A YCF48-like protein; pho 94.2 1.8 6.3E-05 40.7 16.7 105 50-158 160-271 (327)
306 3s94_A LRP-6, low-density lipo 94.1 6.2 0.00021 40.8 22.1 117 48-164 387-508 (619)
307 4a0p_A LRP6, LRP-6, low-densit 94.1 6.1 0.00021 41.0 21.6 111 53-164 389-506 (628)
308 3sre_A PON1, serum paraoxonase 93.8 3.3 0.00011 39.7 17.7 109 45-156 156-287 (355)
309 2ism_A Putative oxidoreductase 93.8 1.4 4.8E-05 42.1 15.1 143 4-154 30-221 (352)
310 3a9g_A Putative uncharacterize 93.5 1.4 4.8E-05 42.2 14.4 141 4-153 28-215 (354)
311 1cru_A Protein (soluble quinop 93.0 3.2 0.00011 41.2 16.7 104 4-113 26-162 (454)
312 1tl2_A L10, protein (tachylect 92.5 0.27 9.4E-06 44.0 7.0 100 53-158 41-155 (236)
313 3kya_A Putative phosphatase; s 92.5 1.4 4.8E-05 44.4 13.1 110 55-164 141-276 (496)
314 2xn4_A Kelch-like protein 2; s 92.1 1.7 5.9E-05 39.9 12.6 151 16-175 109-277 (302)
315 2vpj_A Kelch-like protein 12; 91.9 2.8 9.4E-05 38.4 13.8 137 16-157 113-264 (301)
316 2g8s_A Glucose/sorbosone dehyd 91.6 1.1 3.8E-05 42.8 10.9 101 54-155 19-149 (353)
317 2vpj_A Kelch-like protein 12; 91.5 2.2 7.7E-05 39.1 12.6 110 63-176 112-233 (301)
318 3das_A Putative oxidoreductase 91.3 7.7 0.00026 37.0 16.4 143 3-152 30-218 (347)
319 4asc_A Kelch repeat and BTB do 91.1 3 0.0001 38.6 13.3 114 62-176 147-279 (315)
320 3s25_A Hypothetical 7-bladed b 91.0 5.5 0.00019 37.1 14.8 113 31-156 87-204 (302)
321 3s25_A Hypothetical 7-bladed b 90.9 6.4 0.00022 36.7 15.2 131 7-155 16-164 (302)
322 2g8s_A Glucose/sorbosone dehyd 90.8 2.3 7.8E-05 40.6 12.2 138 6-152 19-214 (353)
323 2zwa_A Leucine carboxyl methyl 90.7 1.8 6E-05 45.6 12.2 161 15-176 451-637 (695)
324 2xn4_A Kelch-like protein 2; s 90.4 3.5 0.00012 37.8 12.8 107 63-175 108-230 (302)
325 3ii7_A Kelch-like protein 7; p 90.3 3 0.0001 38.4 12.3 139 31-175 69-226 (306)
326 2xzh_A Clathrin heavy chain 1; 89.7 14 0.00048 35.1 18.7 146 11-158 158-324 (365)
327 3ii7_A Kelch-like protein 7; p 89.3 3 0.0001 38.3 11.5 152 15-175 101-273 (306)
328 1bpo_A Protein (clathrin); cla 88.3 21 0.00072 35.3 20.6 146 11-158 157-323 (494)
329 3sbq_A Nitrous-oxide reductase 88.2 0.66 2.3E-05 47.2 6.2 70 95-164 323-406 (638)
330 1zgk_A Kelch-like ECH-associat 87.1 3.9 0.00013 37.7 10.7 108 63-176 168-289 (308)
331 2be1_A Serine/threonine-protei 86.8 1.4 4.7E-05 42.1 7.4 110 65-182 11-138 (339)
332 3ei3_A DNA damage-binding prot 86.5 30 0.001 38.7 18.9 97 65-162 524-632 (1158)
333 3ei3_A DNA damage-binding prot 86.2 34 0.0012 38.2 19.2 90 75-167 493-592 (1158)
334 2woz_A Kelch repeat and BTB do 86.0 11 0.00037 34.8 13.2 94 62-157 157-264 (318)
335 4gq2_M Nucleoporin NUP120; bet 85.8 19 0.00066 39.2 16.7 38 96-133 237-274 (950)
336 3sbq_A Nitrous-oxide reductase 85.5 5.3 0.00018 40.7 11.0 101 56-157 326-456 (638)
337 2wg3_C Hedgehog-interacting pr 84.9 12 0.00042 37.1 13.6 105 53-157 14-160 (463)
338 1zgk_A Kelch-like ECH-associat 84.5 3.3 0.00011 38.2 8.7 107 63-175 121-241 (308)
339 2zwa_A Leucine carboxyl methyl 79.8 11 0.00039 39.3 11.6 98 57-155 543-674 (695)
340 2be1_A Serine/threonine-protei 79.4 5.9 0.0002 37.7 8.4 103 33-135 21-140 (339)
341 3twe_A Alpha4H; unknown functi 76.1 4.1 0.00014 22.1 3.5 19 377-395 4-22 (27)
342 4asc_A Kelch repeat and BTB do 75.6 13 0.00044 34.2 9.6 70 15-86 148-224 (315)
343 2xzh_A Clathrin heavy chain 1; 75.0 58 0.002 30.9 18.3 118 59-185 73-199 (365)
344 1xi4_A Clathrin heavy chain; a 74.2 25 0.00084 40.1 12.4 146 11-158 157-323 (1630)
345 2woz_A Kelch repeat and BTB do 73.5 32 0.0011 31.4 11.8 108 63-175 109-232 (318)
346 3no0_A DNA gyrase subunit A; D 72.2 58 0.002 29.6 13.2 113 52-165 67-195 (276)
347 2uvk_A YJHT; unknown function, 71.0 37 0.0013 31.5 11.8 49 74-123 168-224 (357)
348 3ott_A Two-component system se 69.0 1.1E+02 0.0039 31.7 18.0 100 54-157 192-299 (758)
349 4gq2_M Nucleoporin NUP120; bet 68.8 22 0.00074 38.8 10.6 38 54-91 237-274 (950)
350 4fhn_B Nucleoporin NUP120; pro 62.6 16 0.00054 40.7 8.1 37 96-132 239-275 (1139)
351 3ott_A Two-component system se 60.7 1.6E+02 0.0055 30.5 16.7 106 53-164 146-258 (758)
352 4g3b_A Alpha4F3D; alpha helix, 59.0 15 0.00053 19.7 3.5 19 377-395 4-22 (26)
353 3zwu_A Alkaline phosphatase PH 56.8 36 0.0012 34.9 9.0 58 97-154 478-549 (592)
354 4a9v_A PHOX; hydrolase, beta-p 54.3 54 0.0019 33.4 9.6 61 95-155 476-550 (592)
355 3uc1_A DNA gyrase subunit A; D 52.9 1.5E+02 0.005 27.7 13.0 111 53-164 95-226 (327)
356 3zwu_A Alkaline phosphatase PH 52.7 47 0.0016 34.0 9.0 58 55-112 478-548 (592)
357 2uvk_A YJHT; unknown function, 52.5 26 0.0009 32.5 6.8 56 75-132 286-349 (357)
358 3q6k_A 43.2 kDa salivary prote 52.1 1.7E+02 0.0057 28.1 12.7 105 53-157 87-245 (381)
359 1bpo_A Protein (clathrin); cla 51.8 1.9E+02 0.0064 28.6 19.2 119 58-185 71-198 (494)
360 1wp5_A Topoisomerase IV; broke 51.0 1.6E+02 0.0053 27.4 14.6 110 54-164 93-223 (323)
361 4a9v_A PHOX; hydrolase, beta-p 44.5 57 0.002 33.3 8.0 67 5-71 476-549 (592)
362 1suu_A DNA gyrase subunit A; t 42.9 2E+02 0.0069 26.4 15.7 103 63-166 113-231 (312)
363 4fhn_B Nucleoporin NUP120; pro 40.0 22 0.00076 39.5 4.6 38 54-91 239-276 (1139)
364 3f7f_A Nucleoporin NUP120; nuc 37.7 41 0.0014 35.2 5.8 31 103-133 228-258 (729)
365 1zi0_A DNA gyrase subunit A; b 37.1 2.4E+02 0.0084 25.7 13.4 108 53-161 95-221 (307)
366 3uc1_A DNA gyrase subunit A; D 35.7 2.7E+02 0.0092 25.8 13.5 115 53-168 146-281 (327)
367 3f7f_A Nucleoporin NUP120; nuc 35.5 62 0.0021 33.9 6.7 36 54-91 223-258 (729)
368 3b7f_A Glycosyl hydrolase, BNR 29.7 3.4E+02 0.012 25.2 11.8 105 52-158 54-200 (394)
369 3l6v_A GYRA, DNA gyrase subuni 25.8 4.2E+02 0.014 24.9 14.7 60 63-123 112-178 (370)
370 3no0_A DNA gyrase subunit A; D 25.5 3.6E+02 0.012 24.1 14.1 116 53-169 116-249 (276)
371 3q6k_A 43.2 kDa salivary prote 24.2 4.6E+02 0.016 24.9 20.9 133 32-164 123-304 (381)
372 1sqj_A OXG-RCBH, oligoxylogluc 22.4 6.7E+02 0.023 26.1 12.3 102 52-154 14-140 (789)
373 1naf_A ADP-ribosylation factor 20.7 1.7E+02 0.0059 24.2 5.6 25 383-407 52-76 (158)
374 2wg3_C Hedgehog-interacting pr 20.3 6E+02 0.02 24.6 17.9 102 6-114 15-158 (463)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=3.5e-27 Score=226.86 Aligned_cols=206 Identities=14% Similarity=0.168 Sum_probs=174.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++++.|+ .+++||..++..+..+.+|..+|.+++|+|++++|++|+.|++|++||+.++
T Consensus 14 ~~V~~~~fsp~~~~l-~s~~~dg-----~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWV-LTTLYSG-----RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp SCEEEEEECSSSSEE-EEEETTS-----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEECCCCCEE-EEEcCCC-----cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 468999999999877 7777776 4567788899999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEE-EEEe-cCCceEEEEEcc-CCcEEEEEECCCeEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKV-YDIC-IQAATFTVAWHP-KQYLLAYACDDKYDRK 161 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~-~~~~-~~~~V~~l~fsp-dg~~l~s~s~d~~I~v 161 (432)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++..+ ..+. |...|.+++|+| ++..|++|+.|+.|++
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 999999999999999999999999999999999999999988544 4444 888999999999 6799999999999999
Q ss_pred EeCC-------------------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhccccccccc
Q psy9319 162 QDCG-------------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERH 204 (432)
Q Consensus 162 wd~~-------------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~ 204 (432)
||++ .|++||+.++.++..+.+|..... ....
T Consensus 168 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~-----------~~~~ 236 (304)
T 2ynn_A 168 WSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVS-----------FAVF 236 (304)
T ss_dssp EETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-----------EEEE
T ss_pred EECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEE-----------EEEE
Confidence 9962 267788887777777777643211 1112
Q ss_pred CccccccccceeccCcceeecccchh
Q psy9319 205 QPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 205 qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
.|.+.. +++++.|..+|+||...
T Consensus 237 ~p~~~~---l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 237 HPTLPI---IISGSEDGTLKIWNSST 259 (304)
T ss_dssp CSSSSE---EEEEETTSCEEEEETTT
T ss_pred CCCCCE---EEEEcCCCeEEEEECCC
Confidence 344444 88999999999999765
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=4.9e-27 Score=235.73 Aligned_cols=206 Identities=22% Similarity=0.229 Sum_probs=176.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.++.|+|++..+ ++++.|+++ .+||..++.....+.+|.+.|++++|+|+|.+|++|+.|++|++||+.++
T Consensus 109 ~~V~~~~~~p~~~~l-~s~s~Dg~i-----~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVM-VSASEDATI-----KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp SCEEEEEECSSSSEE-EEEESSSCE-----EEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred CcEEEEEEcCCCCEE-EEEeCCCeE-----EEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 457899999999876 888888765 56677789999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.++..+. |...|.++.|+|+|.+|++|+.|+.|++||
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 9999999999999999999999999999999999999999999998886 888899999999999999999999999998
Q ss_pred CC------------------------------------------------------ceEEeecCCCceeeeecCCCchhh
Q psy9319 164 CG------------------------------------------------------NLKVFGFLPEPIKKRKRGGTMSSW 189 (432)
Q Consensus 164 ~~------------------------------------------------------~i~vwd~~~~~~~~~~~g~~mss~ 189 (432)
+. .|++||+.++.++..+.+|....
T Consensus 263 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v- 341 (410)
T 1vyh_C 263 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV- 341 (410)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-
T ss_pred CCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE-
Confidence 52 26677777777766666654211
Q ss_pred hHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 190 VKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 190 ~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
......|.+.. +++++.|..+|+||+..
T Consensus 342 ----------~~v~~~~~g~~---l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 342 ----------RGVLFHSGGKF---ILSCADDKTLRVWDYKN 369 (410)
T ss_dssp ----------EEEEECSSSSC---EEEEETTTEEEEECCTT
T ss_pred ----------EEEEEcCCCCE---EEEEeCCCeEEEEECCC
Confidence 11122345555 88999999999999864
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=2e-25 Score=219.55 Aligned_cols=208 Identities=16% Similarity=0.120 Sum_probs=166.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEE-------------------------------------EEeecCc------
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDF-------------------------------------KFKEHHK------ 41 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i-------------------------------------~~~d~~~------ 41 (432)
+.|.+++|+|++..+ ++++.|+++..|+. .+|+...
T Consensus 65 ~~V~~~~~s~d~~~l-~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRI-VSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM 143 (354)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS
T ss_pred CeEEEEEECCCCCEE-EEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc
Confidence 457888899888765 78888887777752 2333221
Q ss_pred ceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEee--CCCEEEEEeCCCeEE
Q psy9319 42 LEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSH--DGALIASGSEDLTID 119 (432)
Q Consensus 42 ~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~sp--dg~~l~sgs~dg~V~ 119 (432)
......+.+|.+.|.+++|+|++..|++|+.|++|++||+.++.++..+.+|...|.+++|+| +|.+|++|+.||+|+
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 123456678999999999999999999999999999999999999999999999999999988 578999999999999
Q ss_pred EEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCC---------------------------------
Q psy9319 120 IAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCG--------------------------------- 165 (432)
Q Consensus 120 vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~--------------------------------- 165 (432)
+||+++++++..+. |...|.+++|+|++.+|++|+.|++|++||++
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 99999999998886 88999999999999999999999999999963
Q ss_pred ---ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeeccc
Q psy9319 166 ---NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADH 227 (432)
Q Consensus 166 ---~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d 227 (432)
.|++||+.++..+..+.+|... .......|.+.. +++++.|..+|+|+
T Consensus 304 ~d~~i~vwd~~~~~~~~~l~~h~~~-----------v~~l~~spdg~~---l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSILFGHENR-----------VSTLRVSPDGTA---FCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSC-----------EEEEEECTTSSC---EEEEETTSEEEEEC
T ss_pred CCCcEEEEECCCCceEEEEECCCCc-----------EEEEEECCCCCE---EEEEcCCCCEEecC
Confidence 2556666666555555555321 111223455555 88999999999995
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=1.5e-25 Score=218.93 Aligned_cols=172 Identities=18% Similarity=0.234 Sum_probs=149.6
Q ss_pred EEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe
Q psy9319 34 FKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS 113 (432)
Q Consensus 34 i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs 113 (432)
+.+||..+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||+.++.+...+.+|...|.+++|+|++.+|++|+
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEecC---CceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhh
Q psy9319 114 EDLTIDIAHVESGKKVYDICIQ---AATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWV 190 (432)
Q Consensus 114 ~dg~V~vwd~~~~~~~~~~~~~---~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~ 190 (432)
.|++|++||+.++..+..+.+. ..|.+++|+|+|.+|++|+.|+. |++||+.++..+..+.+|......
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~--------i~vwd~~~~~~~~~~~~h~~~v~~ 317 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN--------CNVWDALKADRAGVLAGHDNRVSC 317 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE--------EEEEETTTCCEEEEEECCSSCEEE
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe--------EEEEEcccCcEeeEeecCCCcEEE
Confidence 9999999999999888877644 36999999999999999999999 777777777777778777532211
Q ss_pred HHhhhcccccccccCccccccccceeccCcceeeccc
Q psy9319 191 KAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADH 227 (432)
Q Consensus 191 ~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d 227 (432)
....|.+.. +++++.|..|++||
T Consensus 318 -----------~~~s~dg~~---l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 -----------LGVTDDGMA---VATGSWDSFLKIWN 340 (340)
T ss_dssp -----------EEECTTSSC---EEEEETTSCEEEEC
T ss_pred -----------EEEcCCCCE---EEEEcCCccEEecC
Confidence 122344444 88999999999996
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=2.2e-25 Score=214.03 Aligned_cols=155 Identities=18% Similarity=0.229 Sum_probs=143.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++++.|+.+ .+|+..+++....+.+|...|.+++|+|++.+|++|+.|+.|++||+.++
T Consensus 24 ~~v~~~~~s~~~~~l-~s~~~dg~i-----~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 24 KAVSSVKFSPNGEWL-ASSSADKLI-----KIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCE-----EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CcEEEEEECCCCCEE-EEeeCCCeE-----EEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 458899999999876 777777754 56677788899999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
.++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++.++..+. |..+|.+++|+|++.+|++++.|+.|++||
T Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 98 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999988886 788999999999999999999999999998
Q ss_pred CC
Q psy9319 164 CG 165 (432)
Q Consensus 164 ~~ 165 (432)
+.
T Consensus 178 ~~ 179 (312)
T 4ery_A 178 TA 179 (312)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=1.2e-25 Score=225.49 Aligned_cols=204 Identities=18% Similarity=0.245 Sum_probs=171.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++|+.|+++..| |..++.++..+.+|...|.+++|+|+|.+|++|+.|++|++||+.++
T Consensus 151 ~~V~~v~~~~~~~~l-~sgs~D~~i~iw-----d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 151 DSVQDISFDHSGKLL-ASCSADMTIKLW-----DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCCCEE-----ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred CcEEEEEEcCCCCEE-EEEeCCCeEEEE-----eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 568899999999866 888999887655 45678889999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccC-----------------
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPK----------------- 146 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspd----------------- 146 (432)
.++..+.+|...|.++.|+|++.+|++|+.|++|++||+.++.+...+. |...|.+++|+|+
T Consensus 225 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (410)
T 1vyh_C 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 304 (410)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence 9999999999999999999999999999999999999999999988885 8889999999996
Q ss_pred ---CcEEEEEECCCeEEEEeCC----------------------------------ceEEeecCCCceeeeecCCCchhh
Q psy9319 147 ---QYLLAYACDDKYDRKQDCG----------------------------------NLKVFGFLPEPIKKRKRGGTMSSW 189 (432)
Q Consensus 147 ---g~~l~s~s~d~~I~vwd~~----------------------------------~i~vwd~~~~~~~~~~~g~~mss~ 189 (432)
|.+|++|+.|+.|++||+. .|++||+.++.++..+.+|.....
T Consensus 305 ~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~ 384 (410)
T 1vyh_C 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384 (410)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence 6789999999999999974 266677766666666655542111
Q ss_pred hHHhhhcccccccccCccccccccceeccCcceeecccc
Q psy9319 190 VKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHF 228 (432)
Q Consensus 190 ~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~ 228 (432)
. ....|.+.. +++++.|..||+|+.
T Consensus 385 ~-----------l~~~~~~~~---l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 385 S-----------LDFHKTAPY---VVTGSVDQTVKVWEC 409 (410)
T ss_dssp E-----------EEECSSSSC---EEEEETTSEEEEEC-
T ss_pred E-----------EEEcCCCCE---EEEEeCCCcEEEEeC
Confidence 1 112233333 789999999999985
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=218.12 Aligned_cols=196 Identities=17% Similarity=0.243 Sum_probs=169.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..+.+++|+|++..+ ++++.|+ .+.+|+..++.....+..|...|.+++|+|+|++|++|+.|+.|++||+.++
T Consensus 123 ~~~~~~~~spdg~~l-~~g~~dg-----~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYL-ATGTHVG-----KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp TCCCCEEECTTSSEE-EEECTTS-----EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ccEEEEEECCCCCEE-EEEcCCC-----cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 456789999999877 6666655 4677788889999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
.++..+.+|..+|.+++|+|++.+|++|+.|++|++||+.++..+..+. |...|.+++|+|++.+|++++.|+.
T Consensus 197 ~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~----- 271 (321)
T 3ow8_A 197 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS----- 271 (321)
T ss_dssp EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-----
T ss_pred cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-----
Confidence 9999999999999999999999999999999999999999999888876 8889999999999999999999999
Q ss_pred CCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccc
Q psy9319 164 CGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHF 228 (432)
Q Consensus 164 ~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~ 228 (432)
|++||+.++.++..+.+|....+. ....|.+.. ++.+..|..+++||+
T Consensus 272 ---v~iwd~~~~~~~~~~~~h~~~v~~-----------v~~s~~g~~---l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 272 ---VKVWDVGTRTCVHTFFDHQDQVWG-----------VKYNGNGSK---IVSVGDDQEIHIYDC 319 (321)
T ss_dssp ---EEEEETTTTEEEEEECCCSSCEEE-----------EEECTTSSE---EEEEETTCCEEEEEC
T ss_pred ---EEEEeCCCCEEEEEEcCCCCcEEE-----------EEECCCCCE---EEEEeCCCeEEEEeC
Confidence 777777888888888777532211 222344444 889999999999986
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=5.9e-25 Score=212.85 Aligned_cols=204 Identities=17% Similarity=0.147 Sum_probs=168.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++..++++++.|+++..|++.-.+...+.++..+.+|...|.+++|+|+|.+|++|+.|++|++||+.++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG 97 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 45789999998866679999999998888865443345678899999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE-ecCCceEEEEEccC------CcEEEEEECCC
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI-CIQAATFTVAWHPK------QYLLAYACDDK 157 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~-~~~~~V~~l~fspd------g~~l~s~s~d~ 157 (432)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+.. .++..+ .|...|.++.|+|. +..+++++.|+
T Consensus 98 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 98 ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTS
T ss_pred CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 99999999999999999999999999999999999999964 455555 48889999999985 45899999999
Q ss_pred eEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 158 YDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 158 ~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
. |++||+.++.....+.+|...... ....|.+.. ++.+..|..+|+||....
T Consensus 177 ~--------i~~wd~~~~~~~~~~~~h~~~v~~-----------~~~sp~g~~---l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 177 M--------VKAWNLNQFQIEADFIGHNSNINT-----------LTASPDGTL---IASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp C--------EEEEETTTTEEEEEECCCCSCEEE-----------EEECTTSSE---EEEEETTCEEEEEETTTT
T ss_pred E--------EEEEECCcchhheeecCCCCcEEE-----------EEEcCCCCE---EEEEeCCCeEEEEECCCC
Confidence 9 666666666666666666432111 122355555 889999999999998754
No 9
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=1.6e-24 Score=215.95 Aligned_cols=210 Identities=18% Similarity=0.217 Sum_probs=169.8
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELT 85 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~ 85 (432)
.|.+++|+|++..+ ++++.|+.+ ++||..+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.
T Consensus 125 ~v~~v~~s~dg~~l-~s~~~d~~i-----~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKFL-ATGAEDRLI-----RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp BEEEEEECTTSSEE-EEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEECCCCCEE-EEEcCCCeE-----EEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 47899999999877 777777754 666777899999999999999999999999999999999999999999999
Q ss_pred eEEEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEE--------ecCCceEEEEEccCCcEEEEEECC
Q psy9319 86 CIRTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDI--------CIQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 86 ~~~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~--------~~~~~V~~l~fspdg~~l~s~s~d 156 (432)
+...+. +...+.+++|+| ++.+|++|+.|+.|++||+.++..+..+ .|...|.+++|+|+|.+|++|+.|
T Consensus 199 ~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 199 CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 887776 667899999999 8999999999999999999999887766 377889999999999999999999
Q ss_pred CeEEEEeCC----------------------------------------------ceEEeecCCCceeeeecCCCchhhh
Q psy9319 157 KYDRKQDCG----------------------------------------------NLKVFGFLPEPIKKRKRGGTMSSWV 190 (432)
Q Consensus 157 ~~I~vwd~~----------------------------------------------~i~vwd~~~~~~~~~~~g~~mss~~ 190 (432)
+.|++||+. .|++||+.++..+..+.+|......
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence 999999863 2566777777766666666532221
Q ss_pred HHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 191 KAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 191 ~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
.+... .....|.+.. +++++.|..+|+|++..
T Consensus 358 v~~~~-----~~~~~p~~~~---l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 358 VAVAN-----GSSLGPEYNV---FATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEECS-----SCTTCTTCEE---EEEEETTSEEEEEEEEE
T ss_pred EEecC-----CcCcCCCCCE---EEEECCCCcEEECcccc
Confidence 11100 0001122333 78999999999999865
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=9.3e-25 Score=230.32 Aligned_cols=210 Identities=16% Similarity=0.185 Sum_probs=161.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEE-------------------------------------------EEeecCc
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDF-------------------------------------------KFKEHHK 41 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i-------------------------------------------~~~d~~~ 41 (432)
..|.+++|+|++.++ ++++.|+++++|++ .+|| .
T Consensus 60 ~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~ 136 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--T 136 (611)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--T
T ss_pred CceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--C
Confidence 346778888887765 77777777766653 1122 2
Q ss_pred ceeeEEEccCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEE
Q psy9319 42 LEEQNILKAHPVTCICIEFDPTGK-YFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDI 120 (432)
Q Consensus 42 ~~~~~~l~~h~~~V~~l~~spdg~-~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~v 120 (432)
+.....+.+|...|++++|+|++. .|++|+.|++|++||..++.+...+.+|...|++++|+|+|.+|++|+.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 334445678899999999999886 5999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCcEEEEE--------ecCCceEEEEEccCCcEEEEEECCCeEEEEeCCc--------------------------
Q psy9319 121 AHVESGKKVYDI--------CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGN-------------------------- 166 (432)
Q Consensus 121 wd~~~~~~~~~~--------~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~-------------------------- 166 (432)
||+.+++++..+ .|.+.|.+++|+|+|.+|++++.|++|++||+..
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 999999998877 4788999999999999999999999988887642
Q ss_pred ---------eEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 167 ---------LKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 167 ---------i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
+++|+..++.+...+.+|... .......|.+.. +++++.|..+|+||....
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~-----------v~~l~~spdg~~---l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKA-----------ITALSSSADGKT---LFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSC-----------EEEEEECTTSSE---EEEEETTSCEEEEETTTC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCC-----------EEEEEEeCCCCE---EEEEeCCCcEEEEECCCC
Confidence 233444444444444444311 111122355555 788999999999998653
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=1e-24 Score=214.18 Aligned_cols=198 Identities=14% Similarity=0.087 Sum_probs=157.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeE----EEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQN----ILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~----~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
.|.+++|+|++. + ++++.|+++ ++||..+++.+. .+.+|.+.|++++|+|+|++|++|+.|++|++||+
T Consensus 84 ~v~~~~~s~d~~-l-~~~s~dg~v-----~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 84 GVADLTWVGERG-I-LVASDSGAV-----ELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp CEEEEEEETTTE-E-EEEETTSEE-----EEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CEEEEEEeCCCe-E-EEEECCCEE-----EEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 478899999864 3 577777765 555555665543 34589999999999999999999999999999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCC-CEEEEEeCCCeEEEEeCCCCcEEEEEe---cCCceEEEEEccC-CcEEEEEECC
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDG-ALIASGSEDLTIDIAHVESGKKVYDIC---IQAATFTVAWHPK-QYLLAYACDD 156 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg-~~l~sgs~dg~V~vwd~~~~~~~~~~~---~~~~V~~l~fspd-g~~l~s~s~d 156 (432)
.++.++..+.+|...|++++|+|++ .+|++|+.|++|++||++++++...+. +...+.+++|+|+ +.+|++|+.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 9999999999999999999999987 478999999999999999999888774 4556899999995 5789999999
Q ss_pred CeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 157 KYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 157 ~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
+. |++||+.++.++..+.+|...... ....|.+.. -+.+++.|.+||+||....
T Consensus 237 g~--------v~~wd~~~~~~~~~~~~h~~~v~~-----------v~fsp~g~~--~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 237 GT--------VSLVDTKSTSCVLSSAVHSQCVTG-----------LVFSPHSVP--FLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp SE--------EEEEESCC--CCEEEECCSSCEEE-----------EEECSSSSC--CEEEEETTSCEEEECTTCC
T ss_pred Cc--------EEEEECCCCcEEEEEcCCCCCEEE-----------EEEccCCCe--EEEEEeCCCeEEEEECCCC
Confidence 99 777777788888888887532211 112343321 1568899999999998654
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=7.9e-24 Score=203.19 Aligned_cols=155 Identities=25% Similarity=0.299 Sum_probs=141.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++..+ ++++.|+ .+.+||..+++++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++
T Consensus 66 ~~v~~~~~~~~~~~l-~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 139 (312)
T 4ery_A 66 LGISDVAWSSDSNLL-VSASDDK-----TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 139 (312)
T ss_dssp SCEEEEEECTTSSEE-EEEETTS-----EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CceEEEEEcCCCCEE-EEECCCC-----EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 457889999999876 7777665 5677788899999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
.++..+..|..+|.+++|+|++.+|++|+.|+.|++||+.+++++..+. +...+..++|+|++.+|++++.|+.|++|
T Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 140 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 9999999999999999999999999999999999999999999888764 56679999999999999999999998888
Q ss_pred eCC
Q psy9319 163 DCG 165 (432)
Q Consensus 163 d~~ 165 (432)
|+.
T Consensus 220 d~~ 222 (312)
T 4ery_A 220 DYS 222 (312)
T ss_dssp ETT
T ss_pred ECC
Confidence 863
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.6e-24 Score=211.25 Aligned_cols=198 Identities=15% Similarity=0.150 Sum_probs=157.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTG-KYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg-~~L~sgs~dg~I~iwd~~~ 83 (432)
+.|.+++|+|++..+ ++++.|+++ ++||..+++++..+.+|.+.|++++|+|++ .+|++|+.|++|++||+.+
T Consensus 128 ~~V~~v~~spdg~~l-~sgs~d~~i-----~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQA-VSGSKDICI-----KVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS
T ss_pred CCEEEEEECCCCCEE-EEEeCCCeE-----EEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc
Confidence 568999999999877 888888765 667778999999999999999999999987 5789999999999999999
Q ss_pred CeeEEEEe--eCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCC-cEEEEEECCCe
Q psy9319 84 LTCIRTFQ--RLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQ-YLLAYACDDKY 158 (432)
Q Consensus 84 ~~~~~~~~--~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg-~~l~s~s~d~~ 158 (432)
+.+...+. .|...+.+++|+| ++.+|++|+.||+|++||+++++++..+. |...|.+++|+|+| .+|++|+.|++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 202 PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe
Confidence 98887764 4556799999999 56789999999999999999999988887 88999999999998 68999999999
Q ss_pred EEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 159 DRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 159 I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
|++||+.+++++ .+.+|..... .....|.+.. -+.+++.|.+|++|+...
T Consensus 282 --------i~vwd~~~~~~~-~~~~H~~~V~-----------~v~~sp~~~~--llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 282 --------LAVLDSSLSELF-RSQAHRDFVR-----------DATWSPLNHS--LLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp --------EEEECTTCCEEE-EECCCSSCEE-----------EEEECSSSTT--EEEEEETTSCEEEEECCC
T ss_pred --------EEEEECCCCcEE-EEcCCCCCEE-----------EEEEeCCCCe--EEEEEcCCCeEEEEECCC
Confidence 666666666544 3456643211 1122344433 134788999999998865
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=6.6e-24 Score=205.49 Aligned_cols=155 Identities=15% Similarity=0.140 Sum_probs=138.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.++.|+|++..+ ++++.|++ +++||..+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||+. +
T Consensus 66 ~~v~~~~~s~dg~~l-~s~s~D~~-----v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~ 138 (319)
T 3frx_A 66 HIVQDCTLTADGAYA-LSASWDKT-----LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-G 138 (319)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSE-----EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-S
T ss_pred ccEEEEEECCCCCEE-EEEeCCCE-----EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-C
Confidence 457889999999876 78887765 5677778999999999999999999999999999999999999999997 5
Q ss_pred eeEEEEeeCCCCEEEEEEeeC------CCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCC
Q psy9319 85 TCIRTFQRLDWPVRAISFSHD------GALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spd------g~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
.++..+.+|...|.++.|+|. +..|++++.|+.|++||+.++.....+. |...|.+++|+|+|.+|++|+.|+
T Consensus 139 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 139 QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 678888999999999999984 4589999999999999999998887775 889999999999999999999999
Q ss_pred eEEEEeCCc
Q psy9319 158 YDRKQDCGN 166 (432)
Q Consensus 158 ~I~vwd~~~ 166 (432)
.|++||+..
T Consensus 219 ~i~iwd~~~ 227 (319)
T 3frx_A 219 EIMLWNLAA 227 (319)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 988888743
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=3.6e-24 Score=209.61 Aligned_cols=156 Identities=19% Similarity=0.275 Sum_probs=135.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++..+ ++++.|+++.+|++. .....++..+.+|...|.+++|+|+|.+|++|+.|++|++||+.++
T Consensus 62 ~~v~~~~~sp~g~~l-~s~s~D~~v~iw~~~---~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYL-ASASFDATTCIWKKN---QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEEEEC---CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred CcEEEEEECCCCCEE-EEEECCCcEEEEEcc---CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 457899999999876 888999887766653 1223567889999999999999999999999999999999999865
Q ss_pred ---eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE--EEEEe-cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 85 ---TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK--VYDIC-IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 85 ---~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~--~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.. ...+. |...|.+++|+|+|.+|++|+.|++
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 34667889999999999999999999999999999999988753 34444 8889999999999999999999999
Q ss_pred EEEEeC
Q psy9319 159 DRKQDC 164 (432)
Q Consensus 159 I~vwd~ 164 (432)
|++||.
T Consensus 218 v~iW~~ 223 (345)
T 3fm0_A 218 VRIWRQ 223 (345)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999984
No 16
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=209.82 Aligned_cols=198 Identities=18% Similarity=0.262 Sum_probs=170.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++++|++..+ ++++.|++ +++||..+++++..+.+|...+.+++|+|+|.+|++|+.|+.|++||+.++
T Consensus 81 ~~v~~~~~~~~~~~l-~s~s~D~~-----i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~ 154 (321)
T 3ow8_A 81 LGVVSVDISHTLPIA-ASSSLDAH-----IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG 154 (321)
T ss_dssp SCEEEEEECSSSSEE-EEEETTSE-----EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEECCCCCEE-EEEeCCCc-----EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC
Confidence 347888999998766 77777764 567778899999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
.....+..|...|.+++|+|+|.+|++|+.|+.|++||+.+++++..+. |..+|.+++|+|++.+|++|+.|+.
T Consensus 155 ~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~----- 229 (321)
T 3ow8_A 155 KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY----- 229 (321)
T ss_dssp SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-----
T ss_pred ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-----
Confidence 9999999999999999999999999999999999999999999988886 8889999999999999999999999
Q ss_pred CCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 164 CGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 164 ~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
|++||+.++..+..+.+|...... ....|.+.. ++.++.|..+++||...
T Consensus 230 ---i~iwd~~~~~~~~~~~~h~~~v~~-----------~~~sp~~~~---l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 230 ---IKIYDVQHANLAGTLSGHASWVLN-----------VAFCPDDTH---FVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp ---EEEEETTTCCEEEEECCCSSCEEE-----------EEECTTSSE---EEEEETTSCEEEEETTT
T ss_pred ---EEEEECCCcceeEEEcCCCCceEE-----------EEECCCCCE---EEEEeCCCcEEEEeCCC
Confidence 677777777777777777532211 122345544 88999999999999865
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.4e-24 Score=208.52 Aligned_cols=160 Identities=20% Similarity=0.246 Sum_probs=132.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEe--ecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFK--EHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~--d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~ 82 (432)
..|.+++|+|++.++ ++++.|+++.+|++.-. ......++..+.+|...|.+++|+|+|.+|++|+.|++|++||+.
T Consensus 59 ~~v~~v~~sp~~~~l-as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 59 KAIRSVAWRPHTSLL-AAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 458899999999866 88899998877776421 112346678899999999999999999999999999999999994
Q ss_pred C----CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC--cEEEEEe-cCCceEEEEEccC--CcEEEEE
Q psy9319 83 E----LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESG--KKVYDIC-IQAATFTVAWHPK--QYLLAYA 153 (432)
Q Consensus 83 ~----~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~--~~~~~~~-~~~~V~~l~fspd--g~~l~s~ 153 (432)
. ..++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++ .++..+. |...|.+++|+|+ +.+|++|
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence 2 3567788899999999999999999999999999999998876 5666665 8899999999998 7799999
Q ss_pred ECCCeEEEEeCC
Q psy9319 154 CDDKYDRKQDCG 165 (432)
Q Consensus 154 s~d~~I~vwd~~ 165 (432)
+.|++|++||+.
T Consensus 218 s~D~~v~iw~~~ 229 (330)
T 2hes_X 218 SDDSTVRVWKYM 229 (330)
T ss_dssp ETTSCEEEEEEE
T ss_pred eCCCeEEEEEec
Confidence 999999999863
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.92 E-value=5.1e-24 Score=208.55 Aligned_cols=196 Identities=23% Similarity=0.313 Sum_probs=156.0
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCccee--eE-EEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QN-ILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~-~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~ 82 (432)
.|.+++|+|++.++ ++++.|+++++|++. ++.. .. ...+|...|.+++|+|+|.+|++|+.|++|++||+.
T Consensus 18 ~v~~l~~sp~g~~l-as~~~D~~i~iw~~~-----~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 18 RCWFLAWNPAGTLL-ASCGGDRRIRIWGTE-----GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CEEEEEECTTSSCE-EEEETTSCEEEEEEE-----TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cEEEEEECCCCCEE-EEEcCCCeEEEEEcC-----CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 57889999999877 888999888777654 4432 22 336899999999999999999999999999999988
Q ss_pred CC--eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE---EEEEe-cCCceEEEEEccCCcEEEEEECC
Q psy9319 83 EL--TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK---VYDIC-IQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 83 ~~--~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~---~~~~~-~~~~V~~l~fspdg~~l~s~s~d 156 (432)
.+ .++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.. +..+. |...|.+++|+|++.+|++++.|
T Consensus 92 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 92 QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 66 45788899999999999999999999999999999999987643 34443 78889999999999999999999
Q ss_pred CeEEEEeCCceEEeecCCCc--eeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccch
Q psy9319 157 KYDRKQDCGNLKVFGFLPEP--IKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 157 ~~I~vwd~~~i~vwd~~~~~--~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~ 229 (432)
+. |++|++.++. +...+.+|..... .....|.+.. ++.++.|.++|+|+..
T Consensus 172 ~~--------i~~w~~~~~~~~~~~~~~~h~~~v~-----------~l~~sp~g~~---l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 172 DT--------VKLYREEEDDWVCCATLEGHESTVW-----------SLAFDPSGQR---LASCSDDRTVRIWRQY 224 (345)
T ss_dssp SC--------EEEEEEETTEEEEEEEECCCSSCEE-----------EEEECTTSSE---EEEEETTSCEEEEEEE
T ss_pred Cc--------EEEEEecCCCEEEEEEecCCCCceE-----------EEEECCCCCE---EEEEeCCCeEEEeccc
Confidence 99 5555555543 3345566643211 1222355555 8899999999999853
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.92 E-value=1.6e-23 Score=204.51 Aligned_cols=197 Identities=14% Similarity=0.167 Sum_probs=166.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.++.|+|++.++ ++++.|++ +++||..++..+..+..|...|.+++|+|+|.+|++|+.|+.|++||+.++
T Consensus 56 ~~v~~~~~s~d~~~l-~s~s~Dg~-----v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 56 AKIYAMHWGTDSRLL-LSASQDGK-----LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp SCEEEEEECTTSSEE-EEEETTTE-----EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred CceEEEEECCCCCEE-EEEeCCCc-----EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 567899999999876 78888865 567777889999999999999999999999999999999999999999865
Q ss_pred ----eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeE
Q psy9319 85 ----TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYD 159 (432)
Q Consensus 85 ----~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I 159 (432)
.....+.+|.+.|.++.|+|++. +++++.|++|++||+.++.++..+. |...|.+++|+|++.++++|+.|+.
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~- 207 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS- 207 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-
T ss_pred CCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCc-
Confidence 35667889999999999999875 8899999999999999999988886 8889999999999999999999999
Q ss_pred EEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 160 RKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 160 ~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
|++||+.++.++..+.+|...... ....|.+.. ++.++.|..+|+||...
T Consensus 208 -------v~~wd~~~~~~~~~~~~h~~~v~~-----------v~~~p~~~~---l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 208 -------AKLWDVREGMCRQTFTGHESDINA-----------ICFFPNGNA---FATGSDDATCRLFDLRA 257 (340)
T ss_dssp -------EEEEETTTCSEEEEECCCSSCEEE-----------EEECTTSSE---EEEEETTSCEEEEETTT
T ss_pred -------EEEEECCCCeeEEEEcCCcCCEEE-----------EEEcCCCCE---EEEEcCCCcEEEEECCC
Confidence 777777777887777776532111 122344444 78999999999999865
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2.1e-23 Score=201.22 Aligned_cols=222 Identities=18% Similarity=0.130 Sum_probs=162.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..++++|+.|+++.+|++.-.....+.+...+.+|...|.+++|+|+|.+|++|+.|+.|++|+....
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc
Confidence 56899999999766669999999998888765444455678889999999999999999999999999999999987643
Q ss_pred eeEEE-------------------------------------------EeeCCCCEEEEEEeeCC--CEEEEEeCCCeEE
Q psy9319 85 TCIRT-------------------------------------------FQRLDWPVRAISFSHDG--ALIASGSEDLTID 119 (432)
Q Consensus 85 ~~~~~-------------------------------------------~~~h~~~V~~i~~spdg--~~l~sgs~dg~V~ 119 (432)
..... +.+|...+.+++|++++ .++++++.|+.|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 198 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEE
Confidence 32211 12456678888888754 5778888999999
Q ss_pred EEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCc--------------------------------
Q psy9319 120 IAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGN-------------------------------- 166 (432)
Q Consensus 120 vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~-------------------------------- 166 (432)
+||+.++.++..+. |...|.+++|+|++.+|++|+.|+.|++||+..
T Consensus 199 i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~ 278 (340)
T 4aow_A 199 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPS 278 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTE
T ss_pred EEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCE
Confidence 99999998888776 888999999999999999999999999998642
Q ss_pred eEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 167 LKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 167 i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
|++||+.++..+..+........... ...........|.+.. ++.++.|..||+||...+
T Consensus 279 i~iwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~s~dg~~---l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 279 IKIWDLEGKIIVDELKQEVISTSSKA--EPPQCTSLAWSADGQT---LFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEEETTTTEEEEEECCC-------C--CCCCEEEEEECTTSSE---EEEEETTSCEEEEEEEC-
T ss_pred EEEEECCCCeEEEeccccceeeeccC--CCCCEEEEEECCCCCE---EEEEeCCCEEEEEeCCCc
Confidence 45555555554444433221110000 0001111222345544 789999999999997654
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=2.5e-23 Score=203.18 Aligned_cols=152 Identities=14% Similarity=0.132 Sum_probs=131.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++.++ ++++.|++ +++||..+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||+..
T Consensus 77 ~~V~~~~~~~~~~~l-~s~s~D~~-----v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~- 149 (343)
T 2xzm_R 77 HFVSDLALSQENCFA-ISSSWDKT-----LRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG- 149 (343)
T ss_dssp SCEEEEEECSSTTEE-EEEETTSE-----EEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-
T ss_pred CceEEEEECCCCCEE-EEEcCCCc-----EEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-
Confidence 357889999998876 78887765 56777788999999999999999999999999999999999999999984
Q ss_pred eeEEEEe---eCCCCEEEEEEeeCC----------CEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEE
Q psy9319 85 TCIRTFQ---RLDWPVRAISFSHDG----------ALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLL 150 (432)
Q Consensus 85 ~~~~~~~---~h~~~V~~i~~spdg----------~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l 150 (432)
.....+. +|...|.+++|+|++ .+|++++.|+.|++||. .+.....+. |...|.+++|+|+|.+|
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYI 228 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEE
Confidence 3433433 688899999999987 79999999999999994 455555554 88999999999999999
Q ss_pred EEEECCCeEEEEeC
Q psy9319 151 AYACDDKYDRKQDC 164 (432)
Q Consensus 151 ~s~s~d~~I~vwd~ 164 (432)
++|+.|+.|++||+
T Consensus 229 ~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 229 ATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEETTCEEEEEES
T ss_pred EEEcCCCeEEEEEC
Confidence 99999999999997
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=3.7e-23 Score=206.09 Aligned_cols=199 Identities=16% Similarity=0.227 Sum_probs=158.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc------------------CEEEEEEcCCCCE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV------------------TCICIEFDPTGKY 66 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~------------------~V~~l~~spdg~~ 66 (432)
..|.+++|+|++..+ ++++ |. .+.+|+..++..+..+.+|.. .|.+++|+|+|.+
T Consensus 65 ~~V~~v~fspdg~~l-a~g~-~~-----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 65 SVVCCVKFSNDGEYL-ATGC-NK-----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp SCCCEEEECTTSSEE-EEEC-BS-----CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CEEEEEEECCCCCEE-EEEc-CC-----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 467899999999977 5544 33 457788888888888776542 4999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEcc-
Q psy9319 67 FAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHP- 145 (432)
Q Consensus 67 L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fsp- 145 (432)
|++|+.|+.|+|||+.++..+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++++...+.+...+.+++|+|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred CCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec-------CCCchhhhHHhhhcccccccccCccccccccceecc
Q psy9319 146 KQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR-------GGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK 218 (432)
Q Consensus 146 dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~-------g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~ 218 (432)
++.+|++|+.|+. |++||+.++..+..+. +|.. ........|.+.. ++.+.
T Consensus 218 ~~~~l~~~s~d~~--------v~iwd~~~~~~~~~~~~~~~~~~~h~~-----------~v~~v~~~~~g~~---l~s~s 275 (393)
T 1erj_A 218 DGKYIAAGSLDRA--------VRVWDSETGFLVERLDSENESGTGHKD-----------SVYSVVFTRDGQS---VVSGS 275 (393)
T ss_dssp TCCEEEEEETTSC--------EEEEETTTCCEEEEEC------CCCSS-----------CEEEEEECTTSSE---EEEEE
T ss_pred CCCEEEEEcCCCc--------EEEEECCCCcEEEeecccccCCCCCCC-----------CEEEEEECCCCCE---EEEEe
Confidence 8999999999999 5556666665555442 2221 1111222344444 78999
Q ss_pred CcceeecccchhHH
Q psy9319 219 KDYRVRADHFNKKK 232 (432)
Q Consensus 219 ~D~~lR~~d~~~k~ 232 (432)
.|..+++||.....
T Consensus 276 ~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 276 LDRSVKLWNLQNAN 289 (393)
T ss_dssp TTSEEEEEEC----
T ss_pred CCCEEEEEECCCCC
Confidence 99999999987643
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.5e-23 Score=200.52 Aligned_cols=198 Identities=19% Similarity=0.260 Sum_probs=148.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc--eeeEEE-cc-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNIL-KA-HPVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l-~~-h~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
..|.+++|+|+ ++++++.|+++..|++ .++ .....+ .+ |...|.+++|+|++.+|++|+.|++|+|||
T Consensus 15 ~~v~~~~~s~~---~las~~~D~~i~lw~~-----~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 15 EKIWSFDFSQG---ILATGSTDRKIKLVSV-----KYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp SCEEEEEEETT---EEEEEESSSCEEEEEC-----SSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceeeeccCCC---EEEEEcCCCEEEEEEe-----cCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 45788899887 5588899987766654 332 455566 45 999999999999999999999999999999
Q ss_pred CC-------CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC----cEEEEEe-cCCceEEEEEccCCc
Q psy9319 81 AA-------ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESG----KKVYDIC-IQAATFTVAWHPKQY 148 (432)
Q Consensus 81 ~~-------~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~----~~~~~~~-~~~~V~~l~fspdg~ 148 (432)
+. ...++..+.+|...|.+++|+|+|.+|++|+.|++|++||+... .++..+. |...|.+++|+|++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 85 24567788899999999999999999999999999999999532 4555554 888999999999999
Q ss_pred EEEEEECCCeEEEEeCCceEEeecCCC--ceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecc
Q psy9319 149 LLAYACDDKYDRKQDCGNLKVFGFLPE--PIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRAD 226 (432)
Q Consensus 149 ~l~s~s~d~~I~vwd~~~i~vwd~~~~--~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~ 226 (432)
+|++|+.|++ |++|+..++ .++..+.+|....+.. ...|... ..-+++++.|.++|+|
T Consensus 167 ~l~s~s~D~~--------i~iW~~~~~~~~~~~~~~~h~~~v~~~-----------~~~~~~~-~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 167 LLASSSYDDT--------VRIWKDYDDDWECVAVLNGHEGTVWSS-----------DFDKTEG-VFRLCSGSDDSTVRVW 226 (330)
T ss_dssp EEEEEETTSC--------EEEEEEETTEEEEEEEECCCSSCEEEE-----------EECCSSS-SCEEEEEETTSCEEEE
T ss_pred EEEEEcCCCe--------EEEEECCCCCeeEEEEccCCCCcEEEE-----------EecCCCC-eeEEEEEeCCCeEEEE
Confidence 9999999999 555555444 4566677765322111 1122210 1126789999999999
Q ss_pred cchh
Q psy9319 227 HFNK 230 (432)
Q Consensus 227 d~~~ 230 (432)
|+..
T Consensus 227 ~~~~ 230 (330)
T 2hes_X 227 KYMG 230 (330)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9865
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=3.4e-23 Score=198.26 Aligned_cols=203 Identities=12% Similarity=0.135 Sum_probs=156.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC--CCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP--TGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp--dg~~L~sgs~dg~I~iwd~~ 82 (432)
..|.+++|+|++..+ ++++.|+++++|++. ..+.+++.++.+|.++|++++|+| +|.+|++|+.|++|+|||+.
T Consensus 10 ~~V~~~~~s~~g~~l-as~s~D~~v~iw~~~---~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRM-ATCSSDKTIKIFEVE---GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEEEBC---SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred CceEEEEECCCCCEE-EEEeCCCEEEEEecC---CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 468899999999876 888889887666542 123467889999999999999986 48999999999999999998
Q ss_pred CCe--eEEEEeeCCCCEEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcE--EEEE-ecCCceEEEEEccC---------
Q psy9319 83 ELT--CIRTFQRLDWPVRAISFSHD--GALIASGSEDLTIDIAHVESGKK--VYDI-CIQAATFTVAWHPK--------- 146 (432)
Q Consensus 83 ~~~--~~~~~~~h~~~V~~i~~spd--g~~l~sgs~dg~V~vwd~~~~~~--~~~~-~~~~~V~~l~fspd--------- 146 (432)
++. .+..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++.. ...+ .|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCC
Confidence 774 56778889999999999997 89999999999999999987632 2233 48889999999997
Q ss_pred ----CcEEEEEECCCeEEEEeCCceEEeecCCCc----eeeeecCCCchhhhHHhhhcccccccccCccccccccceecc
Q psy9319 147 ----QYLLAYACDDKYDRKQDCGNLKVFGFLPEP----IKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK 218 (432)
Q Consensus 147 ----g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~----~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~ 218 (432)
+.+|++|+.|+. |++||+.++. ....+.+|...... ....|.+....-+++++
T Consensus 166 ~~~~~~~l~sgs~D~~--------v~lwd~~~~~~~~~~~~~l~~H~~~V~~-----------v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 166 GTKESRKFVTGGADNL--------VKIWKYNSDAQTYVLESTLEGHSDWVRD-----------VAWSPTVLLRSYMASVS 226 (297)
T ss_dssp ----CCEEEEEETTSC--------EEEEEEETTTTEEEEEEEECCCSSCEEE-----------EEECCCCSSSEEEEEEE
T ss_pred CCCCcceEEEEcCCCc--------EEEEEEcCCCceEEEEEEecCCCCceEE-----------EEECCCCCCceEEEEEE
Confidence 579999999999 5555555544 44556666432111 11223321112278899
Q ss_pred Ccceeecccchh
Q psy9319 219 KDYRVRADHFNK 230 (432)
Q Consensus 219 ~D~~lR~~d~~~ 230 (432)
.|..+++||...
T Consensus 227 ~D~~v~iWd~~~ 238 (297)
T 2pm7_B 227 QDRTCIIWTQDN 238 (297)
T ss_dssp TTSCEEEEEESS
T ss_pred CCCcEEEEEeCC
Confidence 999999998864
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=2.9e-23 Score=205.91 Aligned_cols=199 Identities=16% Similarity=0.176 Sum_probs=160.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEE-----ccCCcCEEEEEEcC-CCCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNIL-----KAHPVTCICIEFDP-TGKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l-----~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~i 78 (432)
..|.++.|+|++...+++++.|+++ .+||..+++.+..+ .+|...|.+++|+| ++.+|++|+.|++|++
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i-----~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~ 232 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTC-----VLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCE-----EEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE
T ss_pred cceEEEEEecCCCCEEEEECCCCcE-----EEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE
Confidence 3467888999877666888888765 56677788888777 68999999999987 8899999999999999
Q ss_pred EeCC-CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec--------CCceEEEEEccCCcE
Q psy9319 79 WDAA-ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI--------QAATFTVAWHPKQYL 149 (432)
Q Consensus 79 wd~~-~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~--------~~~V~~l~fspdg~~ 149 (432)
||+. .+.++..+.+|.+.|++++|+|++.+|++|+.|++|++||+.++.++..+.. ...|.+++|+|+|.+
T Consensus 233 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 233 WDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp EETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred EECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 9997 5577889999999999999999999999999999999999999998887742 124889999999999
Q ss_pred EEEEECCCeEEEEeCCceEEeecCCCceeeee----cCCCchhhhHHhhhcccccccccCccccccccceeccCcceeec
Q psy9319 150 LAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK----RGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRA 225 (432)
Q Consensus 150 l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~----~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~ 225 (432)
|++|+.|+. |++||+.++..+..+ .+|.. ........|.+.. +++++.|..+++
T Consensus 313 l~~g~~dg~--------i~vwd~~~~~~~~~~~~~~~~h~~-----------~v~~l~~s~dg~~---l~sgs~D~~i~i 370 (380)
T 3iz6_a 313 LFAGYSNGD--------CYVWDTLLAEMVLNLGTLQNSHEG-----------RISCLGLSSDGSA---LCTGSWDKNLKI 370 (380)
T ss_dssp EEEECTTSC--------EEEEETTTCCEEEEECCSCSSCCC-----------CCCEEEECSSSSE---EEEECTTSCEEE
T ss_pred EEEEECCCC--------EEEEECCCCceEEEEecccCCCCC-----------ceEEEEECCCCCE---EEEeeCCCCEEE
Confidence 999999999 666666666655544 23321 1111222355555 899999999999
Q ss_pred ccchh
Q psy9319 226 DHFNK 230 (432)
Q Consensus 226 ~d~~~ 230 (432)
|++..
T Consensus 371 W~~~~ 375 (380)
T 3iz6_a 371 WAFSG 375 (380)
T ss_dssp EECCS
T ss_pred EecCC
Confidence 99864
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=5.8e-23 Score=219.56 Aligned_cols=216 Identities=16% Similarity=0.112 Sum_probs=168.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.++.|+|++..+ ++++.|++ +++||..++.+...+.+|...|.+++|+|++.+|++|+.|++|++||+...
T Consensus 431 ~~v~~v~~s~~g~~l-~sgs~Dg~-----v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFA-LSGSWDGE-----LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSE-----EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred CcEEEEEECCCCCEE-EEEeCCCc-----EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 457899999999876 78887764 567777899999999999999999999999999999999999999998754
Q ss_pred eeEEEE---eeCCCCEEEEEEeeCC--CEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 85 TCIRTF---QRLDWPVRAISFSHDG--ALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 85 ~~~~~~---~~h~~~V~~i~~spdg--~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
...... .+|...|.+++|+|++ ..|++|+.|++|++||+.++.+...+. |.+.|.+++|+|+|.+|++|+.|+.
T Consensus 505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 333222 3688899999999976 689999999999999999999888886 8899999999999999999999999
Q ss_pred EEEEeCC--------------------------------ceEEeecCCCceeeeecCCCchhhhHHhh-----hcc---c
Q psy9319 159 DRKQDCG--------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAK-----VNQ---K 198 (432)
Q Consensus 159 I~vwd~~--------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~-----~~~---~ 198 (432)
|++||+. .|++||+.++.++..+..+.-........ ... .
T Consensus 585 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (694)
T 3dm0_A 585 VLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIY 664 (694)
T ss_dssp CEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCC
T ss_pred EEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEE
Confidence 9999973 26778888877776665443211100000 000 0
Q ss_pred ccccccCccccccccceeccCcceeecccch
Q psy9319 199 THRERHQPEDRRKLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 199 ~h~er~qp~~r~~~glLe~~~D~~lR~~d~~ 229 (432)
.......|++.. +++++.|.+||+|+..
T Consensus 665 ~~~l~~spdg~~---l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 665 CTSLNWSADGST---LFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEECTTSSE---EEEEETTSEEEEEEC-
T ss_pred eeeEEEcCCCCE---EEEEcCCCeEEEEecc
Confidence 111223455555 8899999999999874
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=8.6e-23 Score=199.38 Aligned_cols=201 Identities=14% Similarity=0.065 Sum_probs=156.5
Q ss_pred Cccccccc-----CC-CCcceeeeeeecCCCceeEEEEeec--CcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeE
Q psy9319 5 NFIPLLGL-----NP-RPSLYQSSVLTDISPKQLDFKFKEH--HKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALV 76 (432)
Q Consensus 5 n~I~~l~~-----~p-~~~~l~~s~s~D~~~~~~~i~~~d~--~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I 76 (432)
..|.++.| +| ++.+ +++++.|++++.|++.-... ..+.+...+.+|...|.+++|+|++.+|++|+.|++|
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~-l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPV-LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCE-EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEE
T ss_pred hhhhheeeEEEeecCCCCCE-EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 45788888 66 5554 58999999988877642110 1245677899999999999999999999999999999
Q ss_pred EEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE---ecCCceEEEEEccCC------
Q psy9319 77 SLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI---CIQAATFTVAWHPKQ------ 147 (432)
Q Consensus 77 ~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~---~~~~~V~~l~fspdg------ 147 (432)
++||+.++.++..+.+|...|.+++|+|++.+|++|+.|++|++||+......... .|...|.+++|+|++
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 180 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKV 180 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCC
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccccccccc
Confidence 99999999999999999999999999999999999999999999999743332222 367789999999987
Q ss_pred ----cEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCccee
Q psy9319 148 ----YLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRV 223 (432)
Q Consensus 148 ----~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~l 223 (432)
.+|++++.|+.|++||. .+.....+.+|.... ......|.+.. ++.+..|..+
T Consensus 181 ~~~~~~l~s~~~d~~i~iwd~---------~~~~~~~~~~h~~~v-----------~~~~~s~~g~~---l~sgs~dg~v 237 (343)
T 2xzm_R 181 QPFAPYFASVGWDGRLKVWNT---------NFQIRYTFKAHESNV-----------NHLSISPNGKY---IATGGKDKKL 237 (343)
T ss_dssp CSSCCEEEEEETTSEEEEEET---------TTEEEEEEECCSSCE-----------EEEEECTTSSE---EEEEETTCEE
T ss_pred CCCCCEEEEEcCCCEEEEEcC---------CCceeEEEcCccccc-----------eEEEECCCCCE---EEEEcCCCeE
Confidence 79999999999555553 234444555554221 11122355555 8899999999
Q ss_pred ecccch
Q psy9319 224 RADHFN 229 (432)
Q Consensus 224 R~~d~~ 229 (432)
++||..
T Consensus 238 ~iwd~~ 243 (343)
T 2xzm_R 238 LIWDIL 243 (343)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999984
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=2.9e-23 Score=221.93 Aligned_cols=206 Identities=20% Similarity=0.120 Sum_probs=166.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++++|++..++++|+.|++++.|++.-.+...+.....+.+|...|.+++|+|+|.+|++|+.|++|+|||+.++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 46889999998877779999998877776643222234567789999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE----ecCCceEEEEEccCC--cEEEEEECCCe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI----CIQAATFTVAWHPKQ--YLLAYACDDKY 158 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~----~~~~~V~~l~fspdg--~~l~s~s~d~~ 158 (432)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+......... .|...|.+++|+|++ ..+++++.|+.
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 542 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 542 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe
Confidence 999999999999999999999999999999999999998655433332 267779999999987 68999999999
Q ss_pred EEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhHH
Q psy9319 159 DRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKKK 232 (432)
Q Consensus 159 I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k~ 232 (432)
|++||+.++.+...+.+|..... .....|.+.. +++++.|..+|+||....+
T Consensus 543 --------v~vwd~~~~~~~~~~~~h~~~v~-----------~v~~spdg~~---l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 543 --------VKVWNLSNCKLRSTLAGHTGYVS-----------TVAVSPDGSL---CASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp --------EEEEETTTCCEEEEECCCSSCEE-----------EEEECTTSSE---EEEEETTSBCEEEETTTTE
T ss_pred --------EEEEECCCCcEEEEEcCCCCCEE-----------EEEEeCCCCE---EEEEeCCCeEEEEECCCCc
Confidence 66666777777777777753211 1122345554 7899999999999987643
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.9e-22 Score=193.79 Aligned_cols=207 Identities=20% Similarity=0.208 Sum_probs=162.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++..+ ++++.|+. +.+||..+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++
T Consensus 33 ~~v~~~~~s~~~~~l-~~~~~dg~-----i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLL-FSCSKDSS-----ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp SCEEEEEECTTSCEE-EEEESSSC-----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred ceEEEEEEcCCCCEE-EEEeCCCE-----EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 568999999999876 66666664 567777899999999999999999999999999999999999999999887
Q ss_pred eeEEEEeeCCC------------------------------------------------------------CEEEEEEee
Q psy9319 85 TCIRTFQRLDW------------------------------------------------------------PVRAISFSH 104 (432)
Q Consensus 85 ~~~~~~~~h~~------------------------------------------------------------~V~~i~~sp 104 (432)
.++..+. +.. .+.+++|+|
T Consensus 107 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 107 QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 6655443 222 677777778
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-CcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCC-----------------
Q psy9319 105 DGALIASGSEDLTIDIAHVES-GKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCG----------------- 165 (432)
Q Consensus 105 dg~~l~sgs~dg~V~vwd~~~-~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~----------------- 165 (432)
++.+|++++.||.|.+||+.+ +..+..+. |...|.+++|+|++.+|++++.|+.|++||+.
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 265 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTA 265 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeE
Confidence 888888888889999999988 66777666 88899999999999999999999999999875
Q ss_pred ------------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccce
Q psy9319 166 ------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLL 215 (432)
Q Consensus 166 ------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glL 215 (432)
.+.+||+.++..+..+.+|... .......|.+.. ++
T Consensus 266 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------v~~~~~s~~~~~---l~ 331 (369)
T 3zwl_B 266 VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP-----------LNTVAISPQGTS---YA 331 (369)
T ss_dssp EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC-----------EEEEEECTTSSE---EE
T ss_pred EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc-----------EEEEEECCCCCE---EE
Confidence 3455666666555555554321 111122344444 78
Q ss_pred eccCcceeecccchhHH
Q psy9319 216 EKKKDYRVRADHFNKKK 232 (432)
Q Consensus 216 e~~~D~~lR~~d~~~k~ 232 (432)
.+..|..+++|++....
T Consensus 332 s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 332 SGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEETTSEEEEEEECHHH
T ss_pred EEcCCCeEEEEECcccc
Confidence 88999999999998754
No 30
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=6.1e-23 Score=196.93 Aligned_cols=155 Identities=17% Similarity=0.226 Sum_probs=130.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc----eeeEEEccCCcCEEEEEEcC--CCCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL----EEQNILKAHPVTCICIEFDP--TGKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~----~~~~~l~~h~~~V~~l~~sp--dg~~L~sgs~dg~I~i 78 (432)
+.|.+++|+|++..+ ++++.|+.+..|++ .++ .....+.+|..+|++++|+| ++.+|++|+.|+.|++
T Consensus 12 ~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHV-ATCSSDQHIKVFKL-----DKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp SCEEEEEECSSSSEE-EEEETTSEEEEEEE-----CSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cceeEEEEcCCCCEE-EEeeCCCeEEEEEC-----CCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 568999999999876 77777776555544 444 56778899999999999999 6999999999999999
Q ss_pred EeCCCC---------eeEEEEeeCCCCEEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcE-------------------
Q psy9319 79 WDAAEL---------TCIRTFQRLDWPVRAISFSHD--GALIASGSEDLTIDIAHVESGKK------------------- 128 (432)
Q Consensus 79 wd~~~~---------~~~~~~~~h~~~V~~i~~spd--g~~l~sgs~dg~V~vwd~~~~~~------------------- 128 (432)
||+.++ ..+..+.+|...|.+++|+|+ +.+|++++.||.|++||+.++..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999876 567888899999999999999 99999999999999999875431
Q ss_pred -----------------------------------------EEEEe-cCCceEEEEEccCC----cEEEEEECCCeEEEE
Q psy9319 129 -----------------------------------------VYDIC-IQAATFTVAWHPKQ----YLLAYACDDKYDRKQ 162 (432)
Q Consensus 129 -----------------------------------------~~~~~-~~~~V~~l~fspdg----~~l~s~s~d~~I~vw 162 (432)
+..+. |...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 22222 67789999999998 899999999998888
Q ss_pred eCC
Q psy9319 163 DCG 165 (432)
Q Consensus 163 d~~ 165 (432)
|+.
T Consensus 246 d~~ 248 (351)
T 3f3f_A 246 KIT 248 (351)
T ss_dssp EEE
T ss_pred eCC
Confidence 764
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.90 E-value=9.1e-23 Score=201.29 Aligned_cols=207 Identities=10% Similarity=0.076 Sum_probs=162.6
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccC---CcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH---PVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h---~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
...|.+++|+|++..++++++.|+.+ .+||..+ ..+..+..| ...|.+++|+|++.+|++|+.|+.|++||
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~~d~~i-----~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSSIRGAT-----TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEETTTEE-----EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCceeEEEeCCCCCCEEEEEeCCCEE-----EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 35678999999554455888877755 5555554 555555544 48899999999999999999999999999
Q ss_pred CCCCeeEEEEeeCCCCEEEEEEeeCCC-EEEEEeCCCeEEEEeCCC----CcEEEEEecCCceEEEEEcc-CCcEEEEEE
Q psy9319 81 AAELTCIRTFQRLDWPVRAISFSHDGA-LIASGSEDLTIDIAHVES----GKKVYDICIQAATFTVAWHP-KQYLLAYAC 154 (432)
Q Consensus 81 ~~~~~~~~~~~~h~~~V~~i~~spdg~-~l~sgs~dg~V~vwd~~~----~~~~~~~~~~~~V~~l~fsp-dg~~l~s~s 154 (432)
+ .+.++..+.+|...|.+++|+|++. +|++|+.|+.|++||+.+ +.++..+.|...|.+++|+| ++.+|++++
T Consensus 192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp T-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred C-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence 9 5778899999999999999999998 999999999999999998 77888888999999999999 999999999
Q ss_pred CCCeEEEEeCC-------------------------------------------------ceEEeecCCCceeeeecCCC
Q psy9319 155 DDKYDRKQDCG-------------------------------------------------NLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 155 ~d~~I~vwd~~-------------------------------------------------~i~vwd~~~~~~~~~~~g~~ 185 (432)
.|+.|++||+. .|++||+.++..+..+.++.
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~ 350 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPN 350 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTT
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCC
Confidence 99999999863 36678887777777776543
Q ss_pred chhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 186 MSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 186 mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
..... ......|.+.. ++.++ |..|++||...
T Consensus 351 ~~~~~---------~~~~~s~~g~~---l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 351 AAGII---------SLNKFSPTGDV---LASGM-GFNILIWNRED 382 (383)
T ss_dssp BCSCC---------CEEEECTTSSE---EEEEE-TTEEEEEECC-
T ss_pred CCceE---------EEEEEecCccE---EEEec-CCcEEEEecCC
Confidence 11111 00112344444 56664 99999998753
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.90 E-value=9.5e-23 Score=214.95 Aligned_cols=198 Identities=17% Similarity=0.127 Sum_probs=158.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++...+++++.|+++. +||..++++...+.+|...|.+++|+|+|.+|++|+.|++|++||+.++
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~-----lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVA-----IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEE-----EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEE-----EEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 35789999999987669999998764 5566788889999999999999999999999999999999999999999
Q ss_pred eeEEEEe-------eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE-------------------------
Q psy9319 85 TCIRTFQ-------RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI------------------------- 132 (432)
Q Consensus 85 ~~~~~~~-------~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~------------------------- 132 (432)
.++..+. +|.+.|.+++|+|+|.+|++++.|++|++||+.+++++..+
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~ 302 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 302 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence 9888884 79999999999999999999999999999999987665432
Q ss_pred -------------------ecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee-cCCCchhhhHH
Q psy9319 133 -------------------CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK-RGGTMSSWVKA 192 (432)
Q Consensus 133 -------------------~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~-~g~~mss~~~a 192 (432)
.|...|.+++|+|+|.+|++++.|+. |++||+.++.....+ .+|.....
T Consensus 303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~--------v~~Wd~~~~~~~~~~~~~h~~~v~--- 371 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH--------INSWDISTGISNRVFPDVHATMIT--- 371 (611)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC--------EEEEETTTCCEEECSSCSCSSCEE---
T ss_pred CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc--------EEEEECCCCceeeecccCCcceEE---
Confidence 26678999999999999999999999 666666666554433 22321100
Q ss_pred hhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 193 AKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 193 ~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
.....+.+ .++..+.|..+|+|+...
T Consensus 372 --------~~~~s~~~----~l~s~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 372 --------GIKTTSKG----DLFTVSWDDHLKVVPAGG 397 (611)
T ss_dssp --------EEEECTTS----CEEEEETTTEEEEECSSS
T ss_pred --------EEEECCCC----cEEEEEcCCceEEeecCC
Confidence 00011211 267788899999998654
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.90 E-value=2.2e-22 Score=193.25 Aligned_cols=168 Identities=20% Similarity=0.292 Sum_probs=144.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc-eeeEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL-EEQNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~-~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~~ 82 (432)
+.|.+++|+|++..+ ++++.|++++.| |..++ .....+.+|...|.+++|+| ++..|++|+.|++|++||+.
T Consensus 98 ~~v~~~~~~~~~~~l-~sgs~D~~v~lW-----d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYV-LSGSDDLTVKLW-----NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp SCEEEEEECSSSSEE-EEEETTSCEEEE-----EGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred CcEEEEEEcCCCCEE-EEECCCCeEEEE-----ECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 568899999999876 888888876555 54455 55678899999999999999 67999999999999999998
Q ss_pred CCeeEEEEe-eCCCCEEEEEEee--CCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 83 ELTCIRTFQ-RLDWPVRAISFSH--DGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 83 ~~~~~~~~~-~h~~~V~~i~~sp--dg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
++.....+. +|...|..+.|+| ++.+|++|+.|++|++||+.++.++..+. |...|.+++|+|++.+|++|+.|+.
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 172 QSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251 (304)
T ss_dssp CSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred CCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe
Confidence 877665554 5668899999987 77899999999999999999999999887 8899999999999999999999999
Q ss_pred EEEEeCCceEEeecCCCceeeeecCCCc
Q psy9319 159 DRKQDCGNLKVFGFLPEPIKKRKRGGTM 186 (432)
Q Consensus 159 I~vwd~~~i~vwd~~~~~~~~~~~g~~m 186 (432)
|++||+.++.++..+.+|.-
T Consensus 252 --------i~iWd~~~~~~~~~~~~~~~ 271 (304)
T 2ynn_A 252 --------LKIWNSSTYKVEKTLNVGLE 271 (304)
T ss_dssp --------EEEEETTTCCEEEEECCSSS
T ss_pred --------EEEEECCCCceeeeccCCCc
Confidence 77777777788777766643
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.90 E-value=4.6e-23 Score=203.00 Aligned_cols=204 Identities=14% Similarity=0.135 Sum_probs=158.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTG-KYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg-~~L~sgs~dg~I~iwd~~~ 83 (432)
+.|.+++|+|++..+ ++++.|+.+ ++||..+++.+..+.+|...|++++|+|++ .++++++.|++|++||+.+
T Consensus 140 ~~V~~v~~spdg~~l-~sgs~dg~v-----~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 140 DIVKTLSVFSDGTQA-VSGGKDFSV-----KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp SCEEEEEECSSSSEE-EEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred CCEEEEEECCCCCEE-EEEeCCCeE-----EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 568999999999877 778887764 667778999999999999999999999987 4789999999999999998
Q ss_pred CeeEEEEe--eCCCCEEEEEEeeC-CCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCC-cEEEEEECCCe
Q psy9319 84 LTCIRTFQ--RLDWPVRAISFSHD-GALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQ-YLLAYACDDKY 158 (432)
Q Consensus 84 ~~~~~~~~--~h~~~V~~i~~spd-g~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg-~~l~s~s~d~~ 158 (432)
+.+...+. .|...+.+++|+|+ +.+|++|+.|+.|++||+.+++++..+. |...|.+++|+|++ .+|++|+.|++
T Consensus 214 ~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 214 PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT 293 (357)
T ss_dssp SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence 88765543 46778999999996 5689999999999999999999888886 88899999999987 68999999999
Q ss_pred EEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCc-cccccccceeccCcceeecccchhHHHHHHH
Q psy9319 159 DRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQP-EDRRKLGLLEKKKDYRVRADHFNKKKKTLQI 237 (432)
Q Consensus 159 I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp-~~r~~~glLe~~~D~~lR~~d~~~k~~~l~~ 237 (432)
|++||+.+++++..+ +|..... .....| ++.. +++++.|..|++|+.....+....
T Consensus 294 --------i~iwd~~~~~~~~~~-~H~~~V~-----------~vafsP~d~~~---l~s~s~Dg~v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 294 --------VAVLDADFSEVFRDL-SHRDFVT-----------GVAWSPLDHSK---FTTVGWDHKVLHHHLPSEGRTENL 350 (357)
T ss_dssp --------EEEECTTSCEEEEEC-CCSSCEE-----------EEEECSSSTTE---EEEEETTSCEEEEECC--------
T ss_pred --------EEEEECCCCcEeEEC-CCCCCEE-----------EEEEeCCCCCE---EEEEcCCCeEEEEECCCCCccccc
Confidence 666677776665543 4432111 111223 2333 778999999999998765444333
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.7e-23 Score=205.68 Aligned_cols=208 Identities=14% Similarity=0.173 Sum_probs=153.1
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc--eeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
.+.|.+++|+|++..+ ++++.|+.+.+|++. ++ ..+..+.+|...|++++|+|++.+|++|+.|++|++||+
T Consensus 11 ~~~v~~~~~s~~g~~l-~~~~~d~~i~iw~~~-----~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEF-VTTTATNQVELYEQD-----GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp SSCCSCCEECSSSSEE-ECCCSSSCBCEEEEE-----TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCcEEEEEECCCCCEE-EEecCCCEEEEEEcc-----CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 4578999999999876 788888888777765 55 678889999999999999999999999999999999999
Q ss_pred CCCe---eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE---EEEEe--cCCceEEEEEccCCcEEEEE
Q psy9319 82 AELT---CIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK---VYDIC--IQAATFTVAWHPKQYLLAYA 153 (432)
Q Consensus 82 ~~~~---~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~---~~~~~--~~~~V~~l~fspdg~~l~s~ 153 (432)
.++. ....+.+|...|.+++|+|++.+|++|+.|+.|++||+.++.. ...+. |...|.+++|+|++.+|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9876 6777888999999999999999999999999999999998873 45554 78899999999999999999
Q ss_pred ECCCeEEEEeCCceE--------Eeec--CCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCccee
Q psy9319 154 CDDKYDRKQDCGNLK--------VFGF--LPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRV 223 (432)
Q Consensus 154 s~d~~I~vwd~~~i~--------vwd~--~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~l 223 (432)
+.|+.|++||+.... .|.. ..+.++..+ +|... .......|.+.. ++.+..|..+
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------v~~~~~sp~~~~---l~~~~~d~~i 229 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW-----------VHAVGFSPSGNA---LAYAGHDSSV 229 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS-----------EEEEEECTTSSC---EEEEETTTEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce-----------EEEEEECCCCCE---EEEEeCCCcE
Confidence 999996666653211 0110 122333333 33211 111222345554 7888999999
Q ss_pred ecccchhHH
Q psy9319 224 RADHFNKKK 232 (432)
Q Consensus 224 R~~d~~~k~ 232 (432)
++||....+
T Consensus 230 ~iwd~~~~~ 238 (377)
T 3dwl_C 230 TIAYPSAPE 238 (377)
T ss_dssp C-CEECSTT
T ss_pred EEEECCCCC
Confidence 999987643
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=2.2e-22 Score=208.94 Aligned_cols=191 Identities=23% Similarity=0.328 Sum_probs=161.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++..+ ++++.|+. +.+|+. +++.+..+.+|...|++++|+|++.+|++++.|+.|++||. ++
T Consensus 386 ~~v~~~~~s~dg~~l-~~~~~d~~-----v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~ 457 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTI-ASASDDKT-----VKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NG 457 (577)
T ss_dssp SCEEEEEECTTSSCE-EEEETTSE-----EEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TS
T ss_pred CCeEEEEECCCCCEE-EEEeCCCE-----EEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CC
Confidence 457889999999877 77777765 455663 67888899999999999999999999999999999999997 46
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
..+..+.+|...|++++|+|++.+|++++.|+.|++||. +++++..+. |...|.+++|+|+|.+|++++.|+.
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~----- 531 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT----- 531 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE-----
T ss_pred CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE-----
Confidence 788899999999999999999999999999999999995 677777776 8899999999999999999999999
Q ss_pred CCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeeccc
Q psy9319 164 CGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADH 227 (432)
Q Consensus 164 ~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d 227 (432)
|++||. ++.++..+.+|.-.... ....|+++. +++++.|.+||+||
T Consensus 532 ---v~lwd~-~~~~~~~~~~h~~~v~~-----------~~fs~dg~~---l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 532 ---VKLWNR-NGQLLQTLTGHSSSVWG-----------VAFSPDGQT---IASASSDKTVKLWN 577 (577)
T ss_dssp ---EEEECT-TSCEEEEEECCSSCEEE-----------EEECTTSSC---EEEEETTSCEEEEC
T ss_pred ---EEEEeC-CCCEEEEEcCCCCCEEE-----------EEEcCCCCE---EEEEeCCCEEEEeC
Confidence 666664 46778888887532211 223466666 88999999999997
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.90 E-value=2.9e-23 Score=204.41 Aligned_cols=199 Identities=12% Similarity=0.065 Sum_probs=153.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee----EEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ----NILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~----~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
..|.+++|+|++.++ +++.|+++++|+ +.+++.. ....+|.+.|++++|+|+|.+|++|+.|++|++||
T Consensus 95 ~~V~~~~~s~d~~~l--~~s~dg~v~lWd-----~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 95 AGVTDVAWVSEKGIL--VASDSGAVELWE-----ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp SCEEEEEEETTTEEE--EEETTSCEEEC-------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEEcCCCCEE--EEECCCEEEEee-----ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 457899999998644 456677665554 4455433 34558999999999999999999999999999999
Q ss_pred CCCCeeEEEEeeCCCCEEEEEEeeCCC-EEEEEeCCCeEEEEeCCCCcEEEEEe---cCCceEEEEEccC-CcEEEEEEC
Q psy9319 81 AAELTCIRTFQRLDWPVRAISFSHDGA-LIASGSEDLTIDIAHVESGKKVYDIC---IQAATFTVAWHPK-QYLLAYACD 155 (432)
Q Consensus 81 ~~~~~~~~~~~~h~~~V~~i~~spdg~-~l~sgs~dg~V~vwd~~~~~~~~~~~---~~~~V~~l~fspd-g~~l~s~s~ 155 (432)
+.++.++..+.+|...|++++|+|++. ++++++.|++|++||+++++++..+. +...+.+++|+|+ +.+|++|+.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999999874 78999999999999999998776553 5667999999997 478999999
Q ss_pred CCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 156 DKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 156 d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
|+. |++||+.++..+..+.+|...... ....|.+.. -+..++.|..||+||....
T Consensus 248 d~~--------i~~wd~~~~~~~~~~~~~~~~v~~-----------l~~sp~~~~--~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 248 TGN--------VSLVNIKNPDSAQTSAVHSQNITG-----------LAYSYHSSP--FLASISEDCTVAVLDADFS 302 (357)
T ss_dssp SSC--------EEEEESSCGGGCEEECCCSSCEEE-----------EEECSSSSC--CEEEEETTSCEEEECTTSC
T ss_pred ccc--------eeEEECCCCcEeEEEeccceeEEE-----------EEEcCCCCC--EEEEEeCCCEEEEEECCCC
Confidence 999 677777777777777766532111 112233221 1567899999999998754
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.90 E-value=1e-22 Score=202.79 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=157.5
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELT 85 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~ 85 (432)
.+....++|++..+ ++++.|+. +.+||..++.....+.+|.+.|++++|+|++.+|++|+.|+.|++||+.++.
T Consensus 99 ~~~~~~~~~~~~~l-~~~~~dg~-----i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 99 YTAVDTAKLQMRRF-ILGTTEGD-----IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp EEEEEEECSSSCEE-EEEETTSC-----EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ceEEEEEecCCCEE-EEEECCCC-----EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 34455678888876 77777765 5667777888888889999999999999999999999999999999999999
Q ss_pred eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe----cCCce---------------------EE
Q psy9319 86 CIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC----IQAAT---------------------FT 140 (432)
Q Consensus 86 ~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~----~~~~V---------------------~~ 140 (432)
.+..+.+|...|.+++|+|++.+|++|+.|++|++||+.+++++..+. +...| .+
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 252 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN 252 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence 999999999999999999999999999999999999999999888875 33334 44
Q ss_pred EEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecC-CCchhhhHHhhhcccccccccCcccc-ccccceecc
Q psy9319 141 VAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRG-GTMSSWVKAAKVNQKTHRERHQPEDR-RKLGLLEKK 218 (432)
Q Consensus 141 l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g-~~mss~~~a~~~~~~~h~er~qp~~r-~~~glLe~~ 218 (432)
++|+|+|.+|++|+.|+. +++||+.++..+..+.. |... .......|.+. . ++.+.
T Consensus 253 ~~~s~~~~~l~~~~~dg~--------i~i~d~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~---l~~g~ 310 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGV--------ITVHNVFSKEQTIQLPSKFTCS-----------CNSLTVDGNNANY---IYAGY 310 (420)
T ss_dssp TCSSCTTEEEEEEETTSC--------EEEEETTTCCEEEEECCTTSSC-----------EEEEEECSSCTTE---EEEEE
T ss_pred eEEcCCCCEEEEEcCCCe--------EEEEECCCCceeEEcccccCCC-----------ceeEEEeCCCCCE---EEEEe
Confidence 556789999999999999 66666666665554432 2111 11112234443 3 78889
Q ss_pred CcceeecccchhHH
Q psy9319 219 KDYRVRADHFNKKK 232 (432)
Q Consensus 219 ~D~~lR~~d~~~k~ 232 (432)
.|..+++||....+
T Consensus 311 ~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 311 ENGMLAQWDLRSPE 324 (420)
T ss_dssp TTSEEEEEETTCTT
T ss_pred CCCeEEEEEcCCCc
Confidence 99999999987643
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.89 E-value=1.2e-22 Score=201.54 Aligned_cols=205 Identities=16% Similarity=0.118 Sum_probs=146.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCC-------------------
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGK------------------- 65 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~------------------- 65 (432)
+.|.+++|+|++..+ ++++.|+++. +||..+++....+.+|...|.+++|+|+|.
T Consensus 67 ~~V~~~~~sp~~~~l-~s~s~D~~v~-----iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWI-VSASQDGRLI-----VWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp SCEEEEEECTTSSCE-EEEETTSEEE-----EEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred cEEEEEEEcCCCCEE-EEEeCCCeEE-----EEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 468999999999876 8888887654 455556666666666655555555555544
Q ss_pred -------------------------------EEEEEeCCCeEEEEeCCCCeeEEEE-----eeCCCCEEEEEEee-CCCE
Q psy9319 66 -------------------------------YFAVGSKDALVSLWDAAELTCIRTF-----QRLDWPVRAISFSH-DGAL 108 (432)
Q Consensus 66 -------------------------------~L~sgs~dg~I~iwd~~~~~~~~~~-----~~h~~~V~~i~~sp-dg~~ 108 (432)
.|++|+.|++|++||+.++.++..+ .+|...|.+++|+| ++.+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 4566666677777777777776666 56888999999987 8899
Q ss_pred EEEEeCCCeEEEEeCC-CCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCc
Q psy9319 109 IASGSEDLTIDIAHVE-SGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTM 186 (432)
Q Consensus 109 l~sgs~dg~V~vwd~~-~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~m 186 (432)
|++|+.|++|++||++ .+.++..+. |.+.|.+++|+|+|.+|++|+.|++ +++||+.++..+..+..+..
T Consensus 221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~--------i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT--------CRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC--------EEEEETTTTEEEEEECCCCS
T ss_pred EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe--------EEEEECCCCcEEEEeccccc
Confidence 9999999999999998 456666665 8899999999999999999999999 66666666666655544321
Q ss_pred hhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 187 SSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 187 ss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
..-.. ..........|.++. ++.+..|..+++||...
T Consensus 293 ~~~~~----~~~v~~~~~s~~g~~---l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 293 RNDNE----LPIVTSVAFSISGRL---LFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp SSCCS----SCSCSEEEECSSSSE---EEEECTTSCEEEEETTT
T ss_pred ccccc----cCceEEEEECCCCCE---EEEEECCCCEEEEECCC
Confidence 10000 000111222355555 78889999999998753
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.89 E-value=2.9e-21 Score=185.48 Aligned_cols=156 Identities=17% Similarity=0.227 Sum_probs=140.1
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
...|.++.|+|++..+ ++++.|+ .+.+|+..++. ....+.+|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 97 ~~~v~~~~~~~~~~~l-~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTL-IVGGEAS-----TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TSBEEEEEECTTSSEE-EEEESSS-----EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCcEEEEEEcCCCCEE-EEEcCCC-----cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 4568899999999876 6666665 45666666665 66778899999999999999999999999999999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEE
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRK 161 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~v 161 (432)
.++..+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++..+..+.+...+.+++|+|++.++++++.++.|++
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCC
Q psy9319 162 QDCG 165 (432)
Q Consensus 162 wd~~ 165 (432)
||+.
T Consensus 251 ~~~~ 254 (337)
T 1gxr_A 251 LHVN 254 (337)
T ss_dssp EETT
T ss_pred EECC
Confidence 9874
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=3.5e-22 Score=197.37 Aligned_cols=198 Identities=12% Similarity=0.138 Sum_probs=154.9
Q ss_pred CcccccccCCCCcceee-eeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQS-SVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~-s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
.++.+++|+|++.++++ +++.|+ .|++||..+++++..+. |.+.|.+++|+|||.+|++++.+ .+.+|+..+
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~-----~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~ 206 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPA-----IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVT 206 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSC-----EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTT
T ss_pred cCEEEEEEcCCCCEEEEEECCCCC-----EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEecc
Confidence 35678999999998743 444554 56778888999988885 67889999999999999999855 566777666
Q ss_pred CeeEEE--EeeCCCCEEEEEEeeCCCEEEEEeCCC----eEEEEeCCCCcEEE----EE-ecCCceEEEEEccCCcEEEE
Q psy9319 84 LTCIRT--FQRLDWPVRAISFSHDGALIASGSEDL----TIDIAHVESGKKVY----DI-CIQAATFTVAWHPKQYLLAY 152 (432)
Q Consensus 84 ~~~~~~--~~~h~~~V~~i~~spdg~~l~sgs~dg----~V~vwd~~~~~~~~----~~-~~~~~V~~l~fspdg~~l~s 152 (432)
+..+.. ..+|...|.+++|+|++.++++++.|+ .+++||+..+.... .+ .|...|.+++|+|+|.+||+
T Consensus 207 ~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 207 GSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp CCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred CcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence 665543 346888999999999999999999877 68899987765422 23 27788999999999999999
Q ss_pred EECCCeEEEEeCCceEEeecCCCceeeee-cCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 153 ACDDKYDRKQDCGNLKVFGFLPEPIKKRK-RGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 153 ~s~d~~I~vwd~~~i~vwd~~~~~~~~~~-~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
|+.|++ |++||+.++.++..+ .+|.... ......|+++. +++++.|.+||+||....
T Consensus 287 gs~D~~--------V~iwd~~~~~~~~~~~~gH~~~V-----------~~v~fSpdg~~---laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 287 ASNDNS--------IALVKLKDLSMSKIFKQAHSFAI-----------TEVTISPDSTY---VASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSC--------EEEEETTTTEEEEEETTSSSSCE-----------EEEEECTTSCE---EEEEETTSEEEEEECCTT
T ss_pred EcCCCE--------EEEEECCCCcEEEEecCcccCCE-----------EEEEECCCCCE---EEEEeCCCeEEEEEcCCC
Confidence 999999 777778888887764 5775332 12333577777 899999999999998543
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=9e-22 Score=212.76 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=140.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++++.|+ .+.+||..++..+..+.+|.++|++++|+|+|.+|++|+.||.|++||+.++
T Consensus 14 ~~v~~i~~sp~~~~l-a~~~~~g-----~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWV-LTTLYSG-----RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp SCEEEEEECSSSSEE-EEEETTS-----EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEECCCCCEE-EEEeCCC-----EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 568999999999877 5555554 5778888899999999999999999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC-cEEEEEe-cCCceEEEEEcc-CCcEEEEEECCCeEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESG-KKVYDIC-IQAATFTVAWHP-KQYLLAYACDDKYDRK 161 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~-~~~~~~~-~~~~V~~l~fsp-dg~~l~s~s~d~~I~v 161 (432)
..+..+.+|.+.|++++|+|++.+|++|+.||.|++||+.++ .....+. |...|.+++|+| ++..|++++.|+.|++
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~v 167 (814)
T 3mkq_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (814)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 999999999999999999999999999999999999999987 5555554 888999999999 8899999999999999
Q ss_pred EeC
Q psy9319 162 QDC 164 (432)
Q Consensus 162 wd~ 164 (432)
||+
T Consensus 168 wd~ 170 (814)
T 3mkq_A 168 WSL 170 (814)
T ss_dssp EET
T ss_pred EEC
Confidence 986
No 43
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.4e-21 Score=189.91 Aligned_cols=156 Identities=11% Similarity=0.107 Sum_probs=133.6
Q ss_pred CcccccccCCC---CcceeeeeeecCCCceeEEEEeecCcceeeEEEcc-----CCcCEEEEEEcCC----CCEEEEEeC
Q psy9319 5 NFIPLLGLNPR---PSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA-----HPVTCICIEFDPT----GKYFAVGSK 72 (432)
Q Consensus 5 n~I~~l~~~p~---~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~-----h~~~V~~l~~spd----g~~L~sgs~ 72 (432)
..|.+++|+|+ +..++++++.++ .+.+|+..++..+..+.. |...|++++|+|+ |.+|++|+.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~-----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSN-----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETT-----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred CceEEEEEecccCCCCceEEEECCCC-----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 46899999984 333334444443 356666667777666654 5578999999998 679999999
Q ss_pred CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEE----ecCCceEEEEEccCC
Q psy9319 73 DALVSLWDAAELTCIRTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDI----CIQAATFTVAWHPKQ 147 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~----~~~~~V~~l~fspdg 147 (432)
||.|++||+.++..+..+.+|...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+ .|...|.+++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999999999999999999999999 9999999999999999999999998887 488899999999999
Q ss_pred cEEEEEECCCeEEEEeCC
Q psy9319 148 YLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 148 ~~l~s~s~d~~I~vwd~~ 165 (432)
.+|++++.|+.|++||+.
T Consensus 174 ~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp SEEEEEETTSCEEEEESC
T ss_pred CEEEEecCCCCEEEEECC
Confidence 999999999999999875
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.89 E-value=1.2e-22 Score=196.20 Aligned_cols=201 Identities=15% Similarity=0.111 Sum_probs=153.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc--eeeEEEccCCcCEEEEEEcC--CCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNILKAHPVTCICIEFDP--TGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l~~h~~~V~~l~~sp--dg~~L~sgs~dg~I~iwd 80 (432)
+.|.+++|+|++..+ ++++.|+++++|++. ++ ..+..+.+|.++|.+++|+| ++.+|++|+.|++|++||
T Consensus 14 ~~V~~v~~s~~g~~l-asgs~D~~v~lwd~~-----~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRL-ATCSSDRSVKIFDVR-----NGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp CCEEEEEECGGGCEE-EEEETTTEEEEEEEE-----TTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred CeEEEeeEcCCCCEE-EEEeCCCeEEEEEec-----CCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 568899999999876 888999887766654 44 35678999999999999986 489999999999999999
Q ss_pred CCCC--eeEEEEeeCCCCEEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcEEE---EE-ecCCceEEEEEccC------
Q psy9319 81 AAEL--TCIRTFQRLDWPVRAISFSHD--GALIASGSEDLTIDIAHVESGKKVY---DI-CIQAATFTVAWHPK------ 146 (432)
Q Consensus 81 ~~~~--~~~~~~~~h~~~V~~i~~spd--g~~l~sgs~dg~V~vwd~~~~~~~~---~~-~~~~~V~~l~fspd------ 146 (432)
+.++ .....+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++.... .+ .|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9887 356778899999999999997 7899999999999999998764322 12 27778999999997
Q ss_pred -----------CcEEEEEECCCeEEEEeCCceEEeecCCC---ceeeeecCCCchhhhHHhhhcccccccccCccccc-c
Q psy9319 147 -----------QYLLAYACDDKYDRKQDCGNLKVFGFLPE---PIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRR-K 211 (432)
Q Consensus 147 -----------g~~l~s~s~d~~I~vwd~~~i~vwd~~~~---~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~-~ 211 (432)
+.+|++|+.|+. |++||+..+ ..+..+.+|..... .....|.+.. .
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~--------v~lWd~~~~~~~~~~~~l~~h~~~V~-----------~v~~sp~~~~~~ 228 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNL--------IKLWKEEEDGQWKEEQKLEAHSDWVR-----------DVAWAPSIGLPT 228 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSB--------CCEEEECTTSCEEEEECCBCCSSCEE-----------EEECCCCSSCSC
T ss_pred cccccccCccccceEEEecCCCe--------EEEEEeCCCCccceeeecccCCCceE-----------EEEecCCCCCCC
Confidence 468999999999 666665533 24555666642211 1112233211 1
Q ss_pred ccceeccCcceeecccchh
Q psy9319 212 LGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 212 ~glLe~~~D~~lR~~d~~~ 230 (432)
.-+++++.|..+++|+...
T Consensus 229 ~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 229 STIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CEEEEEETTCEEEEEECSS
T ss_pred ceEEEEcCCCeEEEEEccC
Confidence 2278899999999998754
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.89 E-value=6.2e-23 Score=207.10 Aligned_cols=155 Identities=10% Similarity=0.035 Sum_probs=126.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc--CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA--HPVTCICIEFDPTGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~--h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~ 82 (432)
..|.+++|+|.+..++++|+.|+++++| |..+......... +...+.+++|+|++.+|++|+.||.|++||+.
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iw-----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQ-----DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEE-----ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEe-----eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 4689999999655555899999876555 5444433333333 34567899999999999999999999999987
Q ss_pred CCeeEEEEeeCCCCEEEEEEeeCCC-EEEEEeCCCeEEEEeCCCCcEEEEE----ecCCceEEEEEccCCcEEEEEECCC
Q psy9319 83 ELTCIRTFQRLDWPVRAISFSHDGA-LIASGSEDLTIDIAHVESGKKVYDI----CIQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 83 ~~~~~~~~~~h~~~V~~i~~spdg~-~l~sgs~dg~V~vwd~~~~~~~~~~----~~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
+..+..+.+|...|.+++|+|++. +|++|+.|++|++||++++.....+ .|...|.+++|+|+|.+|++++.|+
T Consensus 240 -~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 240 -GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp -SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred -cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC
Confidence 456778889999999999999875 7889999999999999886644332 4888999999999999999999999
Q ss_pred eEEEEeCC
Q psy9319 158 YDRKQDCG 165 (432)
Q Consensus 158 ~I~vwd~~ 165 (432)
.|++||+.
T Consensus 319 ~i~iwd~~ 326 (435)
T 4e54_B 319 EIRVYSAS 326 (435)
T ss_dssp CEEEEESS
T ss_pred EEEEEECC
Confidence 99998863
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=4.8e-22 Score=197.93 Aligned_cols=199 Identities=16% Similarity=0.181 Sum_probs=157.2
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcc----eeeEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCC
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL----EEQNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~----~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~~ 82 (432)
..++++|+...++++++.|+.+. +|+.... ..+..+.+|.+.|++++|+| ++.+|++|+.||+|+|||+.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~-----v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFL-----VLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEE-----EEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CcEEECCCeEEEEEEEcCCCEEE-----EEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 45778888777767777777654 4444332 24556789999999999999 99999999999999999999
Q ss_pred CC-------eeEEEEeeCCCCEEEEEEeeCC-CEEEEEeCCCeEEEEeCCCCcEEEEE--e-cCCceEEEEEccCCcEEE
Q psy9319 83 EL-------TCIRTFQRLDWPVRAISFSHDG-ALIASGSEDLTIDIAHVESGKKVYDI--C-IQAATFTVAWHPKQYLLA 151 (432)
Q Consensus 83 ~~-------~~~~~~~~h~~~V~~i~~spdg-~~l~sgs~dg~V~vwd~~~~~~~~~~--~-~~~~V~~l~fspdg~~l~ 151 (432)
++ .++..+.+|...|.+++|+|++ .+|++|+.|+.|++||+.+++++..+ . |...|.+++|+|++.+|+
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 87 6688899999999999999998 69999999999999999999999888 4 888999999999999999
Q ss_pred EEECCCeEEEEeCCceEEeecCCCceeeee-cCCCchhhhHHhhhcccccccccCccccccccceec---cCcceeeccc
Q psy9319 152 YACDDKYDRKQDCGNLKVFGFLPEPIKKRK-RGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEK---KKDYRVRADH 227 (432)
Q Consensus 152 s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~-~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~---~~D~~lR~~d 227 (432)
+++.|+. +++||+.++..+..+ .+|..... ......|.+.. ++.+ ..|..+++||
T Consensus 193 ~~~~d~~--------i~iwd~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~---l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 193 TSCRDKR--------VRVIEPRKGTVVAEKDRPHEGTRP----------VHAVFVSEGKI---LTTGFSRMSERQVALWD 251 (402)
T ss_dssp EEETTSE--------EEEEETTTTEEEEEEECSSCSSSC----------CEEEECSTTEE---EEEEECTTCCEEEEEEE
T ss_pred EEecCCc--------EEEEeCCCCceeeeeccCCCCCcc----------eEEEEcCCCcE---EEEeccCCCCceEEEEc
Confidence 9999999 666667777777666 45542211 11112244333 4455 6899999999
Q ss_pred chhHH
Q psy9319 228 FNKKK 232 (432)
Q Consensus 228 ~~~k~ 232 (432)
....+
T Consensus 252 ~~~~~ 256 (402)
T 2aq5_A 252 TKHLE 256 (402)
T ss_dssp TTBCS
T ss_pred Ccccc
Confidence 87643
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.89 E-value=3.6e-22 Score=198.89 Aligned_cols=199 Identities=15% Similarity=0.136 Sum_probs=157.4
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
...|.+++|+|++..+ ++++.|+ .+.+||..+++.+..+.+|.+.|.+++|+|++.+|++|+.|+.|++||+.+
T Consensus 139 ~~~v~~~~~~~~~~~l-~s~s~d~-----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 139 VSEITKLKFFPSGEAL-ISSSQDM-----QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTS-----EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred cCccEEEEECCCCCEE-EEEeCCC-----eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 3568899999998866 7777776 467778888999999999999999999999999999999999999999999
Q ss_pred CeeEEEEee---CCCCEEEEEE---------------------eeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCc
Q psy9319 84 LTCIRTFQR---LDWPVRAISF---------------------SHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAA 137 (432)
Q Consensus 84 ~~~~~~~~~---h~~~V~~i~~---------------------spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~ 137 (432)
+.++..+.. |...|.+++| +|++.+|++|+.||.|++||+.++..+..+. |...
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 999888875 3445555554 6889999999999999999999999888775 6788
Q ss_pred eEEEEEccCCc-EEEEEECCCeEEEEeCCceEEeecCCCce-eeeecCCCchhhhHHhhhcccccccccCccccccccce
Q psy9319 138 TFTVAWHPKQY-LLAYACDDKYDRKQDCGNLKVFGFLPEPI-KKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLL 215 (432)
Q Consensus 138 V~~l~fspdg~-~l~s~s~d~~I~vwd~~~i~vwd~~~~~~-~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glL 215 (432)
|.+++|+|++. +|++|+.|+. |++||+.++.. +..+.++........ ..|.+.. ++
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~--------i~vwd~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~---l~ 350 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGM--------LAQWDLRSPECPVGEFLINEGTPINNV-----------YFAAGAL---FV 350 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSE--------EEEEETTCTTSCSEEEEESTTSCEEEE-----------EEETTEE---EE
T ss_pred ceeEEEeCCCCCEEEEEeCCCe--------EEEEEcCCCcCchhhhhccCCCCceEE-----------EeCCCCE---EE
Confidence 99999999998 9999999999 66666665432 444444321111100 0122223 78
Q ss_pred eccCcceeecccchh
Q psy9319 216 EKKKDYRVRADHFNK 230 (432)
Q Consensus 216 e~~~D~~lR~~d~~~ 230 (432)
.+..|..+++|+...
T Consensus 351 s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 351 SSGFDTSIKLDIISD 365 (420)
T ss_dssp EETTTEEEEEEEECC
T ss_pred EecCCccEEEEeccC
Confidence 899999999999866
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=2.4e-22 Score=196.27 Aligned_cols=155 Identities=16% Similarity=0.131 Sum_probs=132.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce----eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE----EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~----~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
..|.++.|+|++..+ ++++.|+.+..|++. .+. ......+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus 97 ~~v~~~~~~~~~~~l-~~~~~d~~v~i~d~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 97 RAARCVRWAPNEKKF-AVGSGSRVISICYFE-----QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSSEEEEEEE-----TTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceeEEEECCCCCEE-EEEeCCCEEEEEEec-----CCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 457899999999876 777788877666654 333 2233467899999999999999999999999999999
Q ss_pred C------------------CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEE
Q psy9319 81 A------------------AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTV 141 (432)
Q Consensus 81 ~------------------~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l 141 (432)
+ ..+.++..+.+|...|.+++|+|++.+|++++.|+.|++||+.+++++..+. +...|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 250 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV 250 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEE
T ss_pred cccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEE
Confidence 5 4678888898999999999999999999999999999999999999998887 77789999
Q ss_pred EEccCCcEEEEEECCCeEEEEeCCc
Q psy9319 142 AWHPKQYLLAYACDDKYDRKQDCGN 166 (432)
Q Consensus 142 ~fspdg~~l~s~s~d~~I~vwd~~~ 166 (432)
+|+|++.++++| .|+.|++|++..
T Consensus 251 ~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 251 TFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999988877 899966666544
No 49
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.88 E-value=1.5e-21 Score=191.91 Aligned_cols=156 Identities=18% Similarity=0.269 Sum_probs=140.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC--CCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP--TGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp--dg~~L~sgs~dg~I~iwd~~ 82 (432)
+.|.++.|+|++..+ ++++.|++ +++||..+++++..+.+|...|.+++|+| +|.+|++|+.|++|++||+.
T Consensus 155 ~~v~~~~~~~~~~~l-~t~s~D~~-----v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 155 NYLSACSFTNSDMQI-LTASGDGT-----CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp SCEEEEEECSSSSEE-EEEETTSE-----EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred CcEEEEEEeCCCCEE-EEEeCCCc-----EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 457889999998876 67777764 56777889999999999999999999988 57899999999999999999
Q ss_pred CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec---CCceEEEEEccCCcEEEEEECCCeE
Q psy9319 83 ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI---QAATFTVAWHPKQYLLAYACDDKYD 159 (432)
Q Consensus 83 ~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~---~~~V~~l~fspdg~~l~s~s~d~~I 159 (432)
++.++..+.+|...|++++|+|++.+|++|+.|++|++||++++..+..+.. ...+.+++|+|+|.+|++|+.|+.|
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i 308 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 308 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcE
Confidence 9999999999999999999999999999999999999999999988777652 3468999999999999999999999
Q ss_pred EEEeCCc
Q psy9319 160 RKQDCGN 166 (432)
Q Consensus 160 ~vwd~~~ 166 (432)
++||+..
T Consensus 309 ~vwd~~~ 315 (354)
T 2pbi_B 309 NVWDVLK 315 (354)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999854
No 50
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=2.2e-21 Score=219.62 Aligned_cols=156 Identities=20% Similarity=0.253 Sum_probs=143.0
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
.+.|.+++|+|++..+ ++++.|+. +.+||..+++.+..+.+|.+.|++++|+|+|.+|++|+.|++|++||+.+
T Consensus 615 ~~~v~~~~~s~~~~~l-~s~~~d~~-----i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRI-ASCGADKT-----LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTSC-----EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cccEEEEEECCCCCEE-EEEeCCCe-----EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 3568899999999877 77777765 56777889999999999999999999999999999999999999999999
Q ss_pred CeeEEEEeeCCCCEEEEEEee--CCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSH--DGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDR 160 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~sp--dg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~ 160 (432)
+.++..+.+|...|.+++|+| ++.++++|+.|+.|++||+.++.++..+. |...|.+++|+|++.++++++.|+.|+
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence 999999999999999999999 56689999999999999999999988876 889999999999999999999999988
Q ss_pred EEeCC
Q psy9319 161 KQDCG 165 (432)
Q Consensus 161 vwd~~ 165 (432)
+||+.
T Consensus 769 vwd~~ 773 (1249)
T 3sfz_A 769 LWDVR 773 (1249)
T ss_dssp EEEGG
T ss_pred EEeCC
Confidence 88763
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.5e-21 Score=187.98 Aligned_cols=201 Identities=13% Similarity=0.173 Sum_probs=158.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~iwd~~ 82 (432)
+.|.+++|+|++..+ ++++.|+.+.+|++. ..++..+..+.+|.+.|++++|+|+ +.+|++|+.||.|++||+.
T Consensus 12 ~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRL-ATCSSDKTIKIFEVE---GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp CCEEEEEECSSSSEE-EEEETTSCEEEEEEE---TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred ccEEEEEEcCCCCEE-EEEECCCcEEEEecC---CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 468999999999876 777888877666654 1256778889999999999999987 9999999999999999999
Q ss_pred CCe--eEEEEeeCCCCEEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcE--EEEE-ecCCceEEEEEcc----------
Q psy9319 83 ELT--CIRTFQRLDWPVRAISFSHD--GALIASGSEDLTIDIAHVESGKK--VYDI-CIQAATFTVAWHP---------- 145 (432)
Q Consensus 83 ~~~--~~~~~~~h~~~V~~i~~spd--g~~l~sgs~dg~V~vwd~~~~~~--~~~~-~~~~~V~~l~fsp---------- 145 (432)
++. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++.. ...+ .|...|.+++|+|
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--------
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccccc
Confidence 887 67788889999999999999 99999999999999999988743 2233 4888999999999
Q ss_pred ---CCcEEEEEECCCeEEEEeCCceEEeecCCCc----eeeeecCCCchhhhHHhhhcccccccccCcc---ccccccce
Q psy9319 146 ---KQYLLAYACDDKYDRKQDCGNLKVFGFLPEP----IKKRKRGGTMSSWVKAAKVNQKTHRERHQPE---DRRKLGLL 215 (432)
Q Consensus 146 ---dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~----~~~~~~g~~mss~~~a~~~~~~~h~er~qp~---~r~~~glL 215 (432)
++.++++++.|+. |++||+.++. ++..+.+|.... ......|. +.. ++
T Consensus 168 ~~~~~~~l~~~~~dg~--------i~i~d~~~~~~~~~~~~~~~~h~~~v-----------~~~~~sp~~~~~~~---l~ 225 (379)
T 3jrp_A 168 GTKESRKFVTGGADNL--------VKIWKYNSDAQTYVLESTLEGHSDWV-----------RDVAWSPTVLLRSY---LA 225 (379)
T ss_dssp --CTTCEEEEEETTSC--------EEEEEEETTTTEEEEEEEECCCSSCE-----------EEEEECCCCSSSEE---EE
T ss_pred CCCCCCEEEEEeCCCe--------EEEEEecCCCcceeeEEEEecccCcE-----------eEEEECCCCCCCCe---EE
Confidence 6999999999999 5555554432 333444443211 11122344 334 78
Q ss_pred eccCcceeecccchhH
Q psy9319 216 EKKKDYRVRADHFNKK 231 (432)
Q Consensus 216 e~~~D~~lR~~d~~~k 231 (432)
.+..|..+++||....
T Consensus 226 s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 226 SVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEETTSCEEEEEESST
T ss_pred EEeCCCEEEEEeCCCC
Confidence 8899999999998763
No 52
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=1.1e-21 Score=193.71 Aligned_cols=153 Identities=8% Similarity=-0.038 Sum_probs=127.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeE--EEccCCcCEEEEEEcCCCCEEEEEeCCC----eEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQN--ILKAHPVTCICIEFDPTGKYFAVGSKDA----LVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~--~l~~h~~~V~~l~~spdg~~L~sgs~dg----~I~i 78 (432)
..|.+++|+|++.++ ++++.|. +.+|+..++..+. ...+|...|.+++|+|+|.++++++.|+ .+++
T Consensus 177 ~~V~~v~fspdg~~l-~s~s~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 177 GEVKDLHFSTDGKVV-AYITGSS------LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp SCCCEEEECTTSSEE-EEECSSC------EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred CceEEEEEccCCceE-Eecccee------EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 458899999999877 6665442 3455556666543 3457889999999999999999999887 6888
Q ss_pred EeCCCCee----EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEE
Q psy9319 79 WDAAELTC----IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAY 152 (432)
Q Consensus 79 wd~~~~~~----~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s 152 (432)
|++..+.. ...+.+|...|++++|||||++||+|+.|++|+|||+.+++++..+. |...|++++|+|||.+|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 99876543 35677899999999999999999999999999999999999998863 8999999999999999999
Q ss_pred EECCCeEEEEeC
Q psy9319 153 ACDDKYDRKQDC 164 (432)
Q Consensus 153 ~s~d~~I~vwd~ 164 (432)
||.|++|+|||+
T Consensus 330 ~S~D~tvrvw~i 341 (365)
T 4h5i_A 330 VSAANTIHIIKL 341 (365)
T ss_dssp EETTSEEEEEEC
T ss_pred EeCCCeEEEEEc
Confidence 999999555554
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.8e-21 Score=192.84 Aligned_cols=183 Identities=13% Similarity=0.066 Sum_probs=142.6
Q ss_pred EEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe
Q psy9319 34 FKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS 113 (432)
Q Consensus 34 i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs 113 (432)
+.+|+..++..+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++..+..+.+|...|.+++|+|++ ++++++
T Consensus 229 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~ 307 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS 307 (425)
T ss_dssp EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE
T ss_pred EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe
Confidence 4566666777778888999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceE------------EeecCCCceeee
Q psy9319 114 EDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLK------------VFGFLPEPIKKR 180 (432)
Q Consensus 114 ~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~------------vwd~~~~~~~~~ 180 (432)
.|+.|++||+.++..+..+. +...|.+++|+|++.+|++++.|+.|++||+.... ++.......+..
T Consensus 308 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (425)
T 1r5m_A 308 MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS 387 (425)
T ss_dssp TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEE
T ss_pred CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh
Confidence 99999999999999888886 78899999999999999999999995555553211 000000114555
Q ss_pred ecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccch
Q psy9319 181 KRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 181 ~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~ 229 (432)
+.+|.... ........|.++. ++.+..|..+++|++.
T Consensus 388 ~~~~~~~~---------~v~~~~~s~~~~~---l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 388 YQSSQDND---------YIFDLSWNCAGNK---ISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECCTTCCC---------CEEEEEECTTSSE---EEEEESSSCCEEEECC
T ss_pred hcCcccCC---------ceEEEEccCCCce---EEEEecCceEEEEeec
Confidence 55542210 0111122344444 7788999999999864
No 54
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.88 E-value=2.3e-21 Score=185.45 Aligned_cols=197 Identities=15% Similarity=0.043 Sum_probs=147.4
Q ss_pred CcccccccCCC--CcceeeeeeecCCCceeEEEEeecCcc--eeeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPR--PSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~--~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~i 78 (432)
..|.+++|+|. +. ++++++.|+++.+ ||..++ ..+..+.+|...|.+++|+|+ |.+|++|+.|++|++
T Consensus 54 ~~V~~v~~s~~~~g~-~l~s~s~D~~v~i-----Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGT-ILASCSYDGKVMI-----WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp SCEEEEEECCGGGCS-EEEEEETTTEEEE-----EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CCeEEEEecCCCcCC-EEEEEcCCCEEEE-----EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 45788999864 44 4588888887654 555555 356778899999999999997 899999999999999
Q ss_pred EeCCCCe--eEEEEeeCCCCEEEEEEeeC-------------CCEEEEEeCCCeEEEEeCCCCc----EEEEEe-cCCce
Q psy9319 79 WDAAELT--CIRTFQRLDWPVRAISFSHD-------------GALIASGSEDLTIDIAHVESGK----KVYDIC-IQAAT 138 (432)
Q Consensus 79 wd~~~~~--~~~~~~~h~~~V~~i~~spd-------------g~~l~sgs~dg~V~vwd~~~~~----~~~~~~-~~~~V 138 (432)
||+.++. ....+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++. ....+. |...|
T Consensus 128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence 9998653 24677889999999999997 5799999999999999998876 444554 88899
Q ss_pred EEEEEccCC---cEEEEEECCCeEEEEeCCceEEeecCCCc--ee-eee--cCCCchhhhHHhhhcccccccccCccccc
Q psy9319 139 FTVAWHPKQ---YLLAYACDDKYDRKQDCGNLKVFGFLPEP--IK-KRK--RGGTMSSWVKAAKVNQKTHRERHQPEDRR 210 (432)
Q Consensus 139 ~~l~fspdg---~~l~s~s~d~~I~vwd~~~i~vwd~~~~~--~~-~~~--~g~~mss~~~a~~~~~~~h~er~qp~~r~ 210 (432)
.+++|+|++ .+|++++.|++|++|| +.++. .. ..+ .++.. ........|.+..
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd--------~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWT--------QDNEQGPWKKTLLKEEKFPD-----------VLWRASWSLSGNV 268 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEE--------ESSTTSCCEEEESSSSCCSS-----------CEEEEEECSSSCC
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEE--------eCCCCCccceeeeecccCCC-----------cEEEEEECCCCCE
Confidence 999999985 8999999999955554 44321 11 111 11110 1111223355544
Q ss_pred cccceeccCcceeecccch
Q psy9319 211 KLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 211 ~~glLe~~~D~~lR~~d~~ 229 (432)
+..+..|..+|+|+..
T Consensus 269 ---las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 269 ---LALSGGDNKVTLWKEN 284 (297)
T ss_dssp ---EEEEETTSCEEEEEEC
T ss_pred ---EEEEcCCCcEEEEEEC
Confidence 7788999999999875
No 55
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=4.3e-22 Score=200.88 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=146.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee--eEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~ 81 (432)
..|.+++|+|....++++|+.|+++. +||..++.. ...+.+|.+.|++++|+| ++.+|++|+.||+|++||+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~-----lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIM-----LWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEE-----EECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEE-----EEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 45899999997776679999888765 455545443 445568999999999998 7899999999999999999
Q ss_pred CCCeeEEEEeeC--CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCc-EEEEEECCC
Q psy9319 82 AELTCIRTFQRL--DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQY-LLAYACDDK 157 (432)
Q Consensus 82 ~~~~~~~~~~~h--~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~-~l~s~s~d~ 157 (432)
.++........+ ...+.+++|+|++.+|++|+.||.|++||+... .+..+. |...|.+++|+|++. ++++|+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 876543333333 345789999999999999999999999999654 444444 889999999999885 788999999
Q ss_pred eEEEEeCCceEEeecCCCceeeee---cCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 158 YDRKQDCGNLKVFGFLPEPIKKRK---RGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 158 ~I~vwd~~~i~vwd~~~~~~~~~~---~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
. |++||+.++.....+ .+|... .......|.+.. ++.+..|..|++||...
T Consensus 274 ~--------v~iwd~~~~~~~~~~~~~~~h~~~-----------v~~~~~spdg~~---l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 274 T--------VKIWDLRQVRGKASFLYSLPHRHP-----------VNAACFSPDGAR---LLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp B--------CCEEETTTCCSSSCCSBCCBCSSC-----------EEECCBCTTSSE---EEEEESSSCEEEEESSS
T ss_pred e--------eeEEecccccccceEEEeeecccc-----------ccceeECCCCCe---eEEEcCCCEEEEEECCC
Confidence 9 555555544322221 222211 111222355555 88999999999998764
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=4.7e-21 Score=187.05 Aligned_cols=208 Identities=17% Similarity=0.171 Sum_probs=158.5
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
.+.|.+++|+|++..+ ++++.|+. +.+|+..+++ .+..+.+|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 8 ~~~i~~~~~s~~~~~l-~~~~~d~~-----v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQI-AICPNNHE-----VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp SSCCCEEEECTTSSEE-EEECSSSE-----EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCCCEE-EEEeCCCE-----EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 4568999999999877 66666655 4555555666 88899999999999999999999999999999999999
Q ss_pred CCCeeEEE--EeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE---EEEE--ecCCceEEEEEccCCcEEEEEE
Q psy9319 82 AELTCIRT--FQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK---VYDI--CIQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 82 ~~~~~~~~--~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~---~~~~--~~~~~V~~l~fspdg~~l~s~s 154 (432)
.++..... +..|...|.+++|+|++.+|++++.|+.|++||+..+.. ...+ .|...|.+++|+|++.+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 88875444 367889999999999999999999999999999988773 2333 2678899999999999999999
Q ss_pred CCCeEEEEeCCce--------EEee--cCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceee
Q psy9319 155 DDKYDRKQDCGNL--------KVFG--FLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVR 224 (432)
Q Consensus 155 ~d~~I~vwd~~~i--------~vwd--~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR 224 (432)
.|+.|++||+... ..|. ...+..+..+.+|... .......|.+.. ++.+..|..++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~---l~~~~~d~~i~ 227 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-----------VHGVCFSANGSR---VAWVSHDSTVC 227 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-----------EEEEEECSSSSE---EEEEETTTEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe-----------EEEEEECCCCCE---EEEEeCCCEEE
Confidence 9999666664210 0111 2345555555544321 111122344444 78888999999
Q ss_pred cccchhH
Q psy9319 225 ADHFNKK 231 (432)
Q Consensus 225 ~~d~~~k 231 (432)
+||....
T Consensus 228 i~d~~~~ 234 (372)
T 1k8k_C 228 LADADKK 234 (372)
T ss_dssp EEEGGGT
T ss_pred EEECCCC
Confidence 9999764
No 57
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2e-21 Score=189.56 Aligned_cols=204 Identities=13% Similarity=0.068 Sum_probs=153.1
Q ss_pred cccccccCCCCcceeeeeeecCCCceeE----EEEeecCcceeeEEEc-cCCcCEEEEEEcC--CCCEEEEEeCCCeEEE
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLD----FKFKEHHKLEEQNILK-AHPVTCICIEFDP--TGKYFAVGSKDALVSL 78 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~----i~~~d~~~~~~~~~l~-~h~~~V~~l~~sp--dg~~L~sgs~dg~I~i 78 (432)
.|.++.++|. +++++.|+++..|+ +.+|+..+++.+..+. +|.++|.+++|+| ++.+|++|+.|++|++
T Consensus 78 ~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 78 NPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp CCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 4567788887 58889999888884 4567777777666655 7888999999999 9999999999999999
Q ss_pred EeCCCCeeEEEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEE-EEEe--cCCceEEEEEccCCcEEEEEE
Q psy9319 79 WDAAELTCIRTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKV-YDIC--IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 79 wd~~~~~~~~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~-~~~~--~~~~V~~l~fspdg~~l~s~s 154 (432)
||+.++.+...+.. |...|.+++|+|+|.+|++|+.||.|++||++++..+ ..+. |.++|.+++|+|+|.+|++++
T Consensus 154 wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 154 QSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp EESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 99999988766643 4558999999999999999999999999999999877 5554 789999999999999999999
Q ss_pred CCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccC-cceeecccchhH
Q psy9319 155 DDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKK-DYRVRADHFNKK 231 (432)
Q Consensus 155 ~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~-D~~lR~~d~~~k 231 (432)
++. |++||+.++..+..+........... .......|.+.. ++.+.. |..+++|++...
T Consensus 234 -~~~--------v~iwd~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~---l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 234 -DQT--------VVCFDLRKDVGTLAYPTYTIPEFKTG------TVTYDIDDSGKN---MIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -SSB--------EEEEETTSSTTCBSSCCCBC-----C------CEEEEECTTSSE---EEEEETTTTEEEEEEECTT
T ss_pred -CCe--------EEEEEcCCCCcceeeccccccccccc------ceEEEECCCCCE---EEEecCCCCcEEEEEEccc
Confidence 448 56666665554433332110000000 001222355554 666666 899999998654
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.87 E-value=9e-22 Score=191.21 Aligned_cols=153 Identities=13% Similarity=0.057 Sum_probs=129.2
Q ss_pred CcccccccCCCCc---ceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPS---LYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~---~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd 80 (432)
..|.+++|+|++. .++++++.|+ .+.+||..+++.+..+.+|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 5578999999843 2447777665 567788889999999999999999999999 999999999999999999
Q ss_pred CCCCeeEEEE---eeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe------------------------
Q psy9319 81 AAELTCIRTF---QRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC------------------------ 133 (432)
Q Consensus 81 ~~~~~~~~~~---~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~------------------------ 133 (432)
+.++..+..+ .+|...|.+++|+|++.+|++++.||.|++||+.++..+..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999998888 6899999999999999999999999999999998764432211
Q ss_pred -----cCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 134 -----IQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 134 -----~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
|...|.+++|+ +.++++++.|+.|++||+
T Consensus 225 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp EECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred ccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence 66778888887 668888888888777775
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=9.4e-21 Score=188.74 Aligned_cols=208 Identities=16% Similarity=0.226 Sum_probs=161.8
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeE-----------------------------------EEEeecC-cceeeEE
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLD-----------------------------------FKFKEHH-KLEEQNI 47 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~-----------------------------------i~~~d~~-~~~~~~~ 47 (432)
...|.+++|+|++..+ ++++.|+.+..|+ +.+||.. ....+..
T Consensus 134 ~~~v~~v~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 134 STYVASVKWSHDGSFL-SVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp TCCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCEEEEEECCCCCEE-EEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeE
Confidence 3567888888888766 6677777776665 3466666 4566778
Q ss_pred EccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCC-CEEEEEe--CCCeEEEEeCC
Q psy9319 48 LKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDG-ALIASGS--EDLTIDIAHVE 124 (432)
Q Consensus 48 l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg-~~l~sgs--~dg~V~vwd~~ 124 (432)
+.+|.+.|.+++|+|++.+|++|+.|+.|++||+.++.++..+.+|...|.+++|+|++ .++++|+ .|+.|++||+.
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC
Confidence 88999999999999999999999999999999999999999999999999999999966 5666665 69999999999
Q ss_pred CCcEEEEEecCCceEEEEEccCCcEEEEEE--CCCeEEEEeCCceEEeecCCCceeee--ecCCCchhhhHHhhhccccc
Q psy9319 125 SGKKVYDICIQAATFTVAWHPKQYLLAYAC--DDKYDRKQDCGNLKVFGFLPEPIKKR--KRGGTMSSWVKAAKVNQKTH 200 (432)
Q Consensus 125 ~~~~~~~~~~~~~V~~l~fspdg~~l~s~s--~d~~I~vwd~~~i~vwd~~~~~~~~~--~~g~~mss~~~a~~~~~~~h 200 (432)
++.++..+.+...|.+++|+|++.++++++ .|+. +++|++.++..... +.+|... ..
T Consensus 293 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~--------i~v~~~~~~~~~~~~~~~~h~~~-----------v~ 353 (401)
T 4aez_A 293 TGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN--------LSIWSYSSSGLTKQVDIPAHDTR-----------VL 353 (401)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE--------EEEEEEETTEEEEEEEEECCSSC-----------CC
T ss_pred CCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc--------EEEEecCCccceeEEEecCCCCC-----------EE
Confidence 999999999889999999999999999954 7999 55566555443332 3344321 11
Q ss_pred ccccCccccccccceeccCcceeecccchhHHHH
Q psy9319 201 RERHQPEDRRKLGLLEKKKDYRVRADHFNKKKKT 234 (432)
Q Consensus 201 ~er~qp~~r~~~glLe~~~D~~lR~~d~~~k~~~ 234 (432)
.....|.+.. ++.+..|..+++|+....+..
T Consensus 354 ~~~~s~dg~~---l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 354 YSALSPDGRI---LSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEECTTSSE---EEEECTTSEEEEEECCC----
T ss_pred EEEECCCCCE---EEEEeCCCcEEEEECCCCccc
Confidence 1122344444 788999999999999876554
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.87 E-value=3e-20 Score=177.29 Aligned_cols=148 Identities=18% Similarity=0.250 Sum_probs=125.9
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK--AHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+++++|||++ ++ +++ .|+ .|++||..+++++..+. +|...|++++|+|+|++|++|+.|++|++||+.++
T Consensus 28 ~~~l~WS~~~-~l-Avg-~D~-----tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VL-AVA-LDN-----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EE-EEE-ETT-----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EE-EEE-eCC-----EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 5789999876 33 443 455 46778888998887765 67788999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE-EEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK-VYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~-~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
+++..+.+|...+.++ ++++..+++|+.++.+.+|+...+.. +..+. |...+..+.|++++.++++++.|+.|++|
T Consensus 100 ~~~~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 9999999999888765 45677999999999999999987644 34443 88889999999999999999999999999
Q ss_pred eC
Q psy9319 163 DC 164 (432)
Q Consensus 163 d~ 164 (432)
|+
T Consensus 178 d~ 179 (318)
T 4ggc_A 178 PS 179 (318)
T ss_dssp ES
T ss_pred EC
Confidence 86
No 61
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.87 E-value=5.7e-22 Score=194.79 Aligned_cols=167 Identities=14% Similarity=0.156 Sum_probs=134.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce---eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE---EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~---~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
+.|.+++|+|++..+ ++++.|+++..|++. ++. ....+.+|...|.+++|+|++.+|++|+.|+.|++||+
T Consensus 56 ~~v~~~~~s~~~~~l-~s~s~d~~v~vwd~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRI-VTCSQDRNAYVYEKR-----PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129 (377)
T ss_dssp SCEEEEEECTTTCCE-EEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred ceEEEEEEeCCCCEE-EEEeCCCeEEEEEcC-----CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence 568899999998866 888888876655554 544 67788899999999999999999999999999999999
Q ss_pred CCCe---eEEEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC------------------CcEEEEEecCCceE
Q psy9319 82 AELT---CIRTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVES------------------GKKVYDICIQAATF 139 (432)
Q Consensus 82 ~~~~---~~~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~------------------~~~~~~~~~~~~V~ 139 (432)
.++. ....+.+ |...|.+++|+|++.+|++|+.|+.|++||+.. +.++..+.|...|.
T Consensus 130 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 209 (377)
T 3dwl_C 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVH 209 (377)
T ss_dssp -----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEE
T ss_pred CCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEE
Confidence 9876 4677777 999999999999999999999999999999852 44555556888899
Q ss_pred EEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCce----eeeecCCC
Q psy9319 140 TVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPI----KKRKRGGT 185 (432)
Q Consensus 140 ~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~----~~~~~g~~ 185 (432)
+++|+|+|.+|++++.|+. |++||+.++.. +..+.+|.
T Consensus 210 ~~~~sp~~~~l~~~~~d~~--------i~iwd~~~~~~~~~~~~~~~~~~ 251 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHDSS--------VTIAYPSAPEQPPRALITVKLSQ 251 (377)
T ss_dssp EEEECTTSSCEEEEETTTE--------EC-CEECSTTSCEEECCCEECSS
T ss_pred EEEECCCCCEEEEEeCCCc--------EEEEECCCCCCcceeeEeecCCC
Confidence 9999999999999999999 77777777665 55666654
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.8e-22 Score=204.75 Aligned_cols=203 Identities=11% Similarity=-0.036 Sum_probs=156.0
Q ss_pred CcccccccCCCC-----cceeeeeeecCCCceeEEEEeecC------cceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC
Q psy9319 5 NFIPLLGLNPRP-----SLYQSSVLTDISPKQLDFKFKEHH------KLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD 73 (432)
Q Consensus 5 n~I~~l~~~p~~-----~~l~~s~s~D~~~~~~~i~~~d~~------~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d 73 (432)
..|..++|+|++ ..++++++.|+++++|++...... ...+...+.+|...|++++|+|++ .|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCC
Confidence 457889999972 235689999998877776421100 012345788999999999999864 89999999
Q ss_pred CeEEEEeCCCCe-eEEEEeeCCCCEEEE--EEeeCC-CEEEEEeCCCeEEEEeCCCCcEEEEEe-cC--CceEEEEEccC
Q psy9319 74 ALVSLWDAAELT-CIRTFQRLDWPVRAI--SFSHDG-ALIASGSEDLTIDIAHVESGKKVYDIC-IQ--AATFTVAWHPK 146 (432)
Q Consensus 74 g~I~iwd~~~~~-~~~~~~~h~~~V~~i--~~spdg-~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~--~~V~~l~fspd 146 (432)
|+|++||+.++. +...+.+|...|+++ +|+|+| .+|+|||.|++|++||+++++++..+. |. ..|.+++|+|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 999999998763 456788999999999 578887 899999999999999999887765553 33 35889999999
Q ss_pred CcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecc
Q psy9319 147 QYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRAD 226 (432)
Q Consensus 147 g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~ 226 (432)
+..+++++.|++ |++||+.++.++..+.+|...... ....|.+.. +++++.|.++|+|
T Consensus 367 ~~~l~s~~~d~t--------v~lwd~~~~~~~~~l~gH~~~V~s-----------va~Sp~g~~---l~Sgs~Dgtv~lw 424 (524)
T 2j04_B 367 IYSYIYSDGASS--------LRAVPSRAAFAVHPLVSRETTITA-----------IGVSRLHPM---VLAGSADGSLIIT 424 (524)
T ss_dssp TTEEEEECSSSE--------EEEEETTCTTCCEEEEECSSCEEE-----------EECCSSCCB---CEEEETTTEEECC
T ss_pred cCeEEEeCCCCc--------EEEEECcccccceeeecCCCceEE-----------EEeCCCCCe---EEEEECCCEEEEE
Confidence 999999999999 677777777776777776533222 122455554 8899999999999
Q ss_pred cchh
Q psy9319 227 HFNK 230 (432)
Q Consensus 227 d~~~ 230 (432)
|...
T Consensus 425 d~~~ 428 (524)
T 2j04_B 425 NAAR 428 (524)
T ss_dssp BSCS
T ss_pred echH
Confidence 8744
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=8.9e-21 Score=187.00 Aligned_cols=198 Identities=12% Similarity=0.145 Sum_probs=153.1
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc--cCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEe
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK--AHPVTCICIEFDP-TGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~--~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd 80 (432)
...|.+++|+|++..++++++.|+.+ .+||..++.....+. +|...|.+++|+| ++.+|++++.|+.|++||
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i-----~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDI-----ILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCE-----EEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeE-----EEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 35689999999994455888888765 566666777776665 6999999999999 789999999999999999
Q ss_pred CCCCeeEEEEeeC---CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCc-EEEEEEC
Q psy9319 81 AAELTCIRTFQRL---DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQY-LLAYACD 155 (432)
Q Consensus 81 ~~~~~~~~~~~~h---~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~-~l~s~s~ 155 (432)
+.+ ..+..+..+ ...|.+++|+|++.+|++|+.|+.|++||+ ++.++..+. |...|.+++|+|++. +|++++.
T Consensus 148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp TTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred CCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 985 555666544 478999999999999999999999999999 566777776 889999999999998 9999999
Q ss_pred CCeEEEEeCCceEEeecCC----CceeeeecCCCchhhhHHhhhcccccccccCc-cccccccceeccCcceeecccchh
Q psy9319 156 DKYDRKQDCGNLKVFGFLP----EPIKKRKRGGTMSSWVKAAKVNQKTHRERHQP-EDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 156 d~~I~vwd~~~i~vwd~~~----~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp-~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
|+.| ++||+.+ +.++..+ +|.. ........| .+.. ++.+..|..+++||...
T Consensus 226 d~~i--------~iwd~~~~~~~~~~~~~~-~~~~-----------~v~~~~~s~~~~~~---l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 226 DATV--------KLWDLRNIKDKNSYIAEM-PHEK-----------PVNAAYFNPTDSTK---LLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp TSEE--------EEEEGGGCCSTTCEEEEE-ECSS-----------CEEEEEECTTTSCE---EEEEESSSEEEEEETTB
T ss_pred CCEE--------EEEeCCCCCcccceEEEe-cCCC-----------ceEEEEEcCCCCCE---EEEEcCCCcEEEEECCC
Confidence 9995 4555544 3444433 2221 111112234 4444 78888999999999865
Q ss_pred H
Q psy9319 231 K 231 (432)
Q Consensus 231 k 231 (432)
.
T Consensus 283 ~ 283 (383)
T 3ei3_B 283 W 283 (383)
T ss_dssp T
T ss_pred C
Confidence 4
No 64
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.87 E-value=1.1e-21 Score=195.21 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=133.9
Q ss_pred CcccccccCC-CCcceeeeeeecCCCceeEEEEeecCcc-------eeeEEEccCCcCEEEEEEcCCC-CEEEEEeCCCe
Q psy9319 5 NFIPLLGLNP-RPSLYQSSVLTDISPKQLDFKFKEHHKL-------EEQNILKAHPVTCICIEFDPTG-KYFAVGSKDAL 75 (432)
Q Consensus 5 n~I~~l~~~p-~~~~l~~s~s~D~~~~~~~i~~~d~~~~-------~~~~~l~~h~~~V~~l~~spdg-~~L~sgs~dg~ 75 (432)
..|.+++|+| ++.++ ++++.|+++ .+|+..++ .++..+.+|...|.+++|+|++ .+|++|+.|+.
T Consensus 82 ~~V~~~~~~p~~~~~l-~s~s~dg~v-----~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVI-ASGSEDCTV-----MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp SCEEEEEECTTCTTEE-EEEETTSEE-----EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred CCEEEEEeCCCCCCEE-EEEeCCCeE-----EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 4578999999 56554 888878655 55555565 6688999999999999999998 69999999999
Q ss_pred EEEEeCCCCeeEEEE--eeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE-e-cCCc-eEEEEEccCCcEE
Q psy9319 76 VSLWDAAELTCIRTF--QRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI-C-IQAA-TFTVAWHPKQYLL 150 (432)
Q Consensus 76 I~iwd~~~~~~~~~~--~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~-~-~~~~-V~~l~fspdg~~l 150 (432)
|++||+.++.++..+ .+|...|.+++|+|++.+|++++.|+.|++||++++..+..+ . |.+. +.+++|+|++.+|
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 999999999999999 789999999999999999999999999999999999998887 3 5554 8999999999999
Q ss_pred EEE---ECCCeEEEEeCC
Q psy9319 151 AYA---CDDKYDRKQDCG 165 (432)
Q Consensus 151 ~s~---s~d~~I~vwd~~ 165 (432)
++| +.|+.|++||+.
T Consensus 236 ~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTK 253 (402)
T ss_dssp EEEECTTCCEEEEEEETT
T ss_pred EEeccCCCCceEEEEcCc
Confidence 999 689995555543
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=1.5e-20 Score=185.38 Aligned_cols=211 Identities=15% Similarity=0.138 Sum_probs=168.8
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCC---CCEEEEEeCCCeEEEEe
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPT---GKYFAVGSKDALVSLWD 80 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spd---g~~L~sgs~dg~I~iwd 80 (432)
...|.++.|+|++..++++++.|+ .+.+||..++.....+. +...+.++.|+|. +.++++|+.|+.|++||
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred CCcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 356899999995555557777776 45677777888887776 6788999999984 45999999999999999
Q ss_pred CCCCeeEEEEeeCCCCEEEEEEeeCCC-EEEEEeCCCeEEEEeCCCCc-EEEEE----------------ecCCceEEEE
Q psy9319 81 AAELTCIRTFQRLDWPVRAISFSHDGA-LIASGSEDLTIDIAHVESGK-KVYDI----------------CIQAATFTVA 142 (432)
Q Consensus 81 ~~~~~~~~~~~~h~~~V~~i~~spdg~-~l~sgs~dg~V~vwd~~~~~-~~~~~----------------~~~~~V~~l~ 142 (432)
+.++..+..+.+|...|.+++|+|++. +|++|+.||.|++||++++. ++..+ .|...|.+++
T Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 173 LKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 999999999999999999999999988 58999999999999998765 33333 3677899999
Q ss_pred EccCCcEEEEEECCCeEEEEeCCc---------------------------------------eEEeecCCCceeeeecC
Q psy9319 143 WHPKQYLLAYACDDKYDRKQDCGN---------------------------------------LKVFGFLPEPIKKRKRG 183 (432)
Q Consensus 143 fspdg~~l~s~s~d~~I~vwd~~~---------------------------------------i~vwd~~~~~~~~~~~g 183 (432)
|+|++.+|++++.|+.|++||+.. +.+||+.++..+..+.+
T Consensus 253 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 253 FTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred EcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 999999999999999999999743 77889888888888877
Q ss_pred CCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhHHHH
Q psy9319 184 GTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKKKKT 234 (432)
Q Consensus 184 ~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k~~~ 234 (432)
|...... ....|.+.. ++.+..|..+++||....+..
T Consensus 333 ~~~~v~~-----------~~~s~~~~~---l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 333 HYKTVDC-----------CVFQSNFQE---LYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CSSCEEE-----------EEEETTTTE---EEEEETTSCEEEEEECC----
T ss_pred CCCeEEE-----------EEEcCCCCE---EEEECCCCeEEEEeCCCCCcc
Confidence 7532111 112244444 788999999999999876543
No 66
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.87 E-value=1.3e-20 Score=195.58 Aligned_cols=193 Identities=22% Similarity=0.285 Sum_probs=159.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++++.|+. +.+|+. +++.+..+.+|...|.+++|+|+|++|++++.|+.|++||. ++
T Consensus 345 ~~v~~~~~s~~g~~l-~~~~~dg~-----v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~ 416 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTI-ASASDDKT-----VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG 416 (577)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSE-----EEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TC
T ss_pred CCEEEEEECCCCCEE-EEEeCCCE-----EEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CC
Confidence 457889999999877 67776664 456663 67888899999999999999999999999999999999996 46
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
..+..+.+|...|++++|+|++.+|++++.|+.|++||. +++.+..+. |...|.+++|+|++.+|++++.|+.
T Consensus 417 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~----- 490 (577)
T 2ymu_A 417 QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT----- 490 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-----
T ss_pred CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-----
Confidence 788899999999999999999999999999999999996 556666665 8899999999999999999999999
Q ss_pred CCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccch
Q psy9319 164 CGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 164 ~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~ 229 (432)
|++|+. ++.++..+.+|..... .....|.++. ++.+..|..+|+||+.
T Consensus 491 ---i~iw~~-~~~~~~~~~~h~~~v~-----------~l~~s~dg~~---l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 491 ---VKLWNR-NGQLLQTLTGHSSSVR-----------GVAFSPDGQT---IASASDDKTVKLWNRN 538 (577)
T ss_dssp ---EEEEET-TSCEEEEEECCSSCEE-----------EEEECTTSSC---EEEEETTSEEEEECTT
T ss_pred ---EEEEcC-CCCEEEEEeCCCCCEE-----------EEEEcCCCCE---EEEEECcCEEEEEeCC
Confidence 556663 4677777777753211 1222455555 7889999999999863
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=6.7e-21 Score=188.02 Aligned_cols=169 Identities=14% Similarity=0.134 Sum_probs=138.9
Q ss_pred CcccccccC----CCCcceeeeeeecCCCceeEEEEeec-CcceeeE-----EE-------ccCCcCEEEEEEcCCCCEE
Q psy9319 5 NFIPLLGLN----PRPSLYQSSVLTDISPKQLDFKFKEH-HKLEEQN-----IL-------KAHPVTCICIEFDPTGKYF 67 (432)
Q Consensus 5 n~I~~l~~~----p~~~~l~~s~s~D~~~~~~~i~~~d~-~~~~~~~-----~l-------~~h~~~V~~l~~spdg~~L 67 (432)
..|.++.|+ |++..++++++.|+.+..|++..... ..+..+. .+ ..|...|.+++|+|++ +|
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 678999999 99987247888888776666652000 0044444 66 4589999999999999 99
Q ss_pred EEEeCCCeEEEEeCCCCeeEEEEee---C---CCCEEEEEEeeCCCEEEEEeCC---CeEEEEeCCCCcEEEEEe-----
Q psy9319 68 AVGSKDALVSLWDAAELTCIRTFQR---L---DWPVRAISFSHDGALIASGSED---LTIDIAHVESGKKVYDIC----- 133 (432)
Q Consensus 68 ~sgs~dg~I~iwd~~~~~~~~~~~~---h---~~~V~~i~~spdg~~l~sgs~d---g~V~vwd~~~~~~~~~~~----- 133 (432)
++|+.|+.|++||+.++..+..+.. | ...|.+++|+|++.+|++++.| +.|++||+.+++++..+.
T Consensus 201 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~ 280 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 280 (397)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc
Confidence 9999999999999999999999998 8 9999999999999999999999 999999999999888875
Q ss_pred ---------cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 134 ---------IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 134 ---------~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
|...|.+++|+|++.+|++++.|+. |++||+.++..+..+.
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK--------LRFWDVKTKERITTLN 330 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEETTSE--------EEEEETTTTEEEEEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEeCCCe--------EEEEEcCCCceeEEEe
Confidence 6788999999999999999999999 6666666677766666
No 68
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.86 E-value=9.7e-21 Score=183.33 Aligned_cols=199 Identities=11% Similarity=0.028 Sum_probs=143.0
Q ss_pred cccccccCCC----Ccceeeeeeec---------------CCCceeEEEEeec-CcceeeEEEccCCcCEEEEEEcC---
Q psy9319 6 FIPLLGLNPR----PSLYQSSVLTD---------------ISPKQLDFKFKEH-HKLEEQNILKAHPVTCICIEFDP--- 62 (432)
Q Consensus 6 ~I~~l~~~p~----~~~l~~s~s~D---------------~~~~~~~i~~~d~-~~~~~~~~l~~h~~~V~~l~~sp--- 62 (432)
.|..++++|+ +..++. ++.+ .+.....|++|+. .+++.+..+.+|...++.++|+|
T Consensus 113 ~v~sla~spd~~~~~~~l~s-~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLK-SGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEECC------CCEEEEE-EEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred ceEEEEECCCccccccEEEe-CCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 4678888888 655533 3321 1112445556665 44777777778888888888888
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCC---CCEEEEEEeeCCCEE------------EEEeCCCeEEEEeCCCCc
Q psy9319 63 TGKYFAVGSKDALVSLWDAAELTCIRTFQRLD---WPVRAISFSHDGALI------------ASGSEDLTIDIAHVESGK 127 (432)
Q Consensus 63 dg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~---~~V~~i~~spdg~~l------------~sgs~dg~V~vwd~~~~~ 127 (432)
++.+|++|+.|++|+|||+.+|+++.++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..++.
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 66889999999999999999999999998754 367788999999876 567889999999999998
Q ss_pred EEEEEe------cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccc
Q psy9319 128 KVYDIC------IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHR 201 (432)
Q Consensus 128 ~~~~~~------~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~ 201 (432)
++..+. |...+.+. +.++.++++++.|++ |++||+.+|+++..+.+|....+..
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgT--------IkIWDl~tGk~l~tL~gH~~~vvs~---------- 331 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGT--------IAIWDLLLGQCTALLPPVSDQHWSF---------- 331 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSC--------EEEEETTTCSEEEEECCC--CCCCE----------
T ss_pred EEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCc--------EEEEECCCCcEEEEecCCCCCeEEE----------
Confidence 877652 33334333 334889999999999 8889999999999998875432211
Q ss_pred cccCccccccccceeccCcceeecccc
Q psy9319 202 ERHQPEDRRKLGLLEKKKDYRVRADHF 228 (432)
Q Consensus 202 er~qp~~r~~~glLe~~~D~~lR~~d~ 228 (432)
....|++.. +++++.|.+||+||+
T Consensus 332 vafSPDG~~---LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSH---LLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSE---EEEECTTSCEEEEEE
T ss_pred EEECCCCCE---EEEEECCCcEEEecC
Confidence 123466666 889999999999986
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.86 E-value=4.2e-21 Score=192.55 Aligned_cols=209 Identities=14% Similarity=0.188 Sum_probs=149.5
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce-----------eeEEEccCC------------cCEEEEE
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE-----------EQNILKAHP------------VTCICIE 59 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~-----------~~~~l~~h~------------~~V~~l~ 59 (432)
..+.|.+++|+|++.++ ++++.|+.+.+|++ .++. ....+.+|. +.|++++
T Consensus 27 ~~~~V~~v~~s~~g~~l-a~g~~dg~v~iw~~-----~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 27 EADIISTVEFNHSGELL-ATGDKGGRVVIFQQ-----EQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGGSEEEEEECSSSSEE-EEEETTSEEEEEEE-----CC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred ccCcEEEEEECCCCCEE-EEEcCCCeEEEEEe-----cCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 34678999999999877 77788876655554 4444 577899998 8899999
Q ss_pred EcCCC--CEEEEEeCCCeEEEEeCCCCeeE---------------------------------------EE-EeeCCCCE
Q psy9319 60 FDPTG--KYFAVGSKDALVSLWDAAELTCI---------------------------------------RT-FQRLDWPV 97 (432)
Q Consensus 60 ~spdg--~~L~sgs~dg~I~iwd~~~~~~~---------------------------------------~~-~~~h~~~V 97 (432)
|+|++ ..|++++.|++|++||+.++... .. ..+|...|
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99998 79999999999999998764331 12 35799999
Q ss_pred EEEEEeeCCCEEEEEeCCCeEEEEeCCC-CcEEEEE--------ecCCceEEEEEccCC-cEEEEEECCCeEEEEeCCce
Q psy9319 98 RAISFSHDGALIASGSEDLTIDIAHVES-GKKVYDI--------CIQAATFTVAWHPKQ-YLLAYACDDKYDRKQDCGNL 167 (432)
Q Consensus 98 ~~i~~spdg~~l~sgs~dg~V~vwd~~~-~~~~~~~--------~~~~~V~~l~fspdg-~~l~s~s~d~~I~vwd~~~i 167 (432)
.+++|+|++.+|++| .|+.|++||+.+ +.++..+ .|...|.+++|+|++ .+|++|+.|+. |
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~--------i 251 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT--------I 251 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC--------E
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe--------E
Confidence 999999999999998 799999999984 4455433 378889999999998 99999999999 5
Q ss_pred EEeecCCCce----eeeecCCCchhhhH-HhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 168 KVFGFLPEPI----KKRKRGGTMSSWVK-AAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 168 ~vwd~~~~~~----~~~~~g~~mss~~~-a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
++||+.++.. +..+.++....... ..............|.+.. ++.+.. ..+++||...
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~---l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY---MMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE---EEEEES-SEEEEEETTC
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE---EEEeeC-CeEEEEeCCC
Confidence 5555555544 44555543210000 0000001222233444444 666666 9999999864
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.86 E-value=2e-20 Score=179.55 Aligned_cols=198 Identities=13% Similarity=0.043 Sum_probs=154.5
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce---eeEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE---EQNILK--AHPVTCICIEFDPTGKYFAVGSKDALVSL 78 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~---~~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I~i 78 (432)
.+.|.++.|+|++..+ ++++ |+ .+.+|+..++. .+..+. +|...|.+++|+|++.+|++++.|+.|++
T Consensus 51 ~~~v~~~~~~~~~~~l-~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHV-YTGG-KG-----CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp SSCCCEEEECSSSSEE-EEEC-BS-----EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred CCceEEEEEecCCcEE-EEcC-CC-----eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 4568899999999877 5544 65 45667666554 333444 79999999999999999999999999999
Q ss_pred EeCCCCe--eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEEC
Q psy9319 79 WDAAELT--CIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 79 wd~~~~~--~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~ 155 (432)
||+.++. ....+..|...|.+++|+|++.++++++.|+.|++||+.+++.+..+. |...|.+++|+|++.+|++++.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9999877 567788899999999999999999999999999999999999888886 8889999999999999999999
Q ss_pred CCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 156 DKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 156 d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
|+. +++||+.++..+..+.... ........|.+.. ++.+..|..+++||....
T Consensus 204 dg~--------i~~~d~~~~~~~~~~~~~~------------~v~~~~~s~~~~~---l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 204 DNT--------VRSWDLREGRQLQQHDFTS------------QIFSLGYCPTGEW---LAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp TSE--------EEEEETTTTEEEEEEECSS------------CEEEEEECTTSSE---EEEEETTSCEEEEETTSS
T ss_pred CCc--------EEEEECCCCceEeeecCCC------------ceEEEEECCCCCE---EEEEcCCCcEEEEECCCC
Confidence 999 5555555555544432110 0111112244444 677778899999988753
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6e-21 Score=193.24 Aligned_cols=164 Identities=15% Similarity=0.045 Sum_probs=140.9
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecC--cceeeEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHH--KLEEQNILK--AHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~--~~~~~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
.|.+++|+|++..++++++.|+++ .+|+.. ++..+..+. +|...|++++|+|+|.+|++|+.+|.|++|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v-----~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSL-----LVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEE-----EEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEECCCCeE-----EEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 689999999999876888777665 555555 677777776 67789999999999999999999999999999
Q ss_pred CCCeeEE----EEeeCCCCEEEEEEeeC---CCEEEEEeCCCeEEEEeCCCCcEEEEE--ecCCceEEEEEccCCcEEEE
Q psy9319 82 AELTCIR----TFQRLDWPVRAISFSHD---GALIASGSEDLTIDIAHVESGKKVYDI--CIQAATFTVAWHPKQYLLAY 152 (432)
Q Consensus 82 ~~~~~~~----~~~~h~~~V~~i~~spd---g~~l~sgs~dg~V~vwd~~~~~~~~~~--~~~~~V~~l~fspdg~~l~s 152 (432)
.++.... .+.+|...|++++|+|+ +.+|++|+.|+.|++||+.++.++..+ .|...|.+++|+ ++.+|++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 8776543 77889999999999999 999999999999999999999988774 388999999999 9999999
Q ss_pred EECCCeEEEEeCCceEEeecCCCceeeeecC
Q psy9319 153 ACDDKYDRKQDCGNLKVFGFLPEPIKKRKRG 183 (432)
Q Consensus 153 ~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g 183 (432)
++.|+. |++||+.++.++..+..
T Consensus 258 ~~~d~~--------v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 258 AGGDDK--------IFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp EESSSE--------EEEEETTTCCEEEEEEC
T ss_pred EeCCCe--------EEEEECCCCcEeeeecc
Confidence 999999 67777777777666643
No 72
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.86 E-value=3.4e-20 Score=178.63 Aligned_cols=180 Identities=18% Similarity=0.176 Sum_probs=142.1
Q ss_pred ecCcceeeEEEccCCcCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCC-----eeEEEEeeCCCCEEEEEEeeCCCEEEE
Q psy9319 38 EHHKLEEQNILKAHPVTCICIEFDPT-GKYFAVGSKDALVSLWDAAEL-----TCIRTFQRLDWPVRAISFSHDGALIAS 111 (432)
Q Consensus 38 d~~~~~~~~~l~~h~~~V~~l~~spd-g~~L~sgs~dg~I~iwd~~~~-----~~~~~~~~h~~~V~~i~~spdg~~l~s 111 (432)
...+..+..+|+||.+.|++++|+|+ +.+|+|||.|++|+|||+.+. .+...+.+|...|.+++|+|++.+|++
T Consensus 24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 34455667789999999999999997 689999999999999998754 356788899999999999999999999
Q ss_pred EeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCc------------------------
Q psy9319 112 GSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGN------------------------ 166 (432)
Q Consensus 112 gs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~------------------------ 166 (432)
|+.|+.|++|+...+....... +...+..+.++|++.+|++++.|+.+++||+..
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred EcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 9999999999999888777665 677788899999999999999999999998632
Q ss_pred -------------eEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 167 -------------LKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 167 -------------i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
+++||+.++..+..+.+|.... ......|.+.. ++.+..|..+++||....
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v-----------~~~~~s~~~~~---l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYL-----------NTVTVSPDGSL---CASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------EEEEECTTSSE---EEEEETTCEEEEEETTTT
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcE-----------EEEEECCCCCE---EEEEeCCCeEEEEEeccC
Confidence 5556666555555555543211 01112344444 788899999999998753
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=188.94 Aligned_cols=212 Identities=12% Similarity=0.063 Sum_probs=155.4
Q ss_pred CcccccccCCCC--cceeeeeeecCCCceeEEEEeecC----------------------------------cceeeEE-
Q psy9319 5 NFIPLLGLNPRP--SLYQSSVLTDISPKQLDFKFKEHH----------------------------------KLEEQNI- 47 (432)
Q Consensus 5 n~I~~l~~~p~~--~~l~~s~s~D~~~~~~~i~~~d~~----------------------------------~~~~~~~- 47 (432)
..|.++.|+|++ ..+ ++++.|+++..|++.-.... ...+...
T Consensus 94 ~~V~~l~~~~~~~~~~l-~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQF-LLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp CCCCEEEECCCCSSSEE-EEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCCcceE-EEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 458899999998 444 77789999988887642110 0011123
Q ss_pred EccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CeeEEE-------EeeCCCCEEEEEEeeCC-CEEEEEeCCCeE
Q psy9319 48 LKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE-LTCIRT-------FQRLDWPVRAISFSHDG-ALIASGSEDLTI 118 (432)
Q Consensus 48 l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~-~~~~~~-------~~~h~~~V~~i~~spdg-~~l~sgs~dg~V 118 (432)
+.+|...|++++|+|+|.+|++| .|+.|++||+.+ +.++.. +.+|...|++++|+|++ .+|++|+.||.|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 36899999999999999999998 799999999984 444442 45799999999999998 999999999999
Q ss_pred EEEeCCCCcE----EEEEe-cCC------------ceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCC-Cceeee
Q psy9319 119 DIAHVESGKK----VYDIC-IQA------------ATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLP-EPIKKR 180 (432)
Q Consensus 119 ~vwd~~~~~~----~~~~~-~~~------------~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~-~~~~~~ 180 (432)
++||++++.. +..+. +.. .|.+++|+|+|.+|++++. +. |++||+.+ +..+..
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~--------v~iwd~~~~~~~~~~ 322 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS--------VKVWDLNMENRPVET 322 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE--------EEEEETTCCSSCSCC
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce--------EEEEeCCCCccccce
Confidence 9999999886 56665 443 8999999999999999998 99 66666665 677777
Q ss_pred ecCCCc--hhhhHHhhhccc---ccccccCccccccccceeccCcceeecccchhH
Q psy9319 181 KRGGTM--SSWVKAAKVNQK---THRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 181 ~~g~~m--ss~~~a~~~~~~---~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
+.+|.. +.+...... .. .......|.+.. ++.+..|..+++||....
T Consensus 323 ~~~~~~~~~~l~~~~~~-~~i~~~~~~~~s~~~~~---l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 323 YQVHEYLRSKLCSLYEN-DCIFDKFECCWNGSDSV---VMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp EESCGGGTTTHHHHHHT-SGGGCCCCEEECTTSSE---EEEECSTTEEEEEETTTC
T ss_pred eeccccccccccccccc-cccccceEEEECCCCCE---EEEeccCCEEEEEEcCCC
Confidence 777642 111000000 00 001223355555 789999999999998764
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4e-20 Score=183.07 Aligned_cols=200 Identities=13% Similarity=0.169 Sum_probs=161.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++|+|++..+ ++++.|+.+. +|+ .++..+..+.+|...|.+++|+|++.+|++++.|+.|++||+.++
T Consensus 109 ~~v~~~~~s~~~~~l-~~~~~dg~i~-----i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSI-VTGVENGELR-----LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp BCEEEEEECTTSSEE-EEEETTSCEE-----EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT
T ss_pred CceEEEEEcCCCCEE-EEEeCCCeEE-----EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCC
Confidence 378999999999877 6777777654 455 577889999999999999999999999999999999999999876
Q ss_pred eeEE--------------------------------------------------------EEeeCCCCEEEEEEeeCCCE
Q psy9319 85 TCIR--------------------------------------------------------TFQRLDWPVRAISFSHDGAL 108 (432)
Q Consensus 85 ~~~~--------------------------------------------------------~~~~h~~~V~~i~~spdg~~ 108 (432)
..+. .+.+|...|.+++|+|++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE
Confidence 5443 33457788999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCch
Q psy9319 109 IASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMS 187 (432)
Q Consensus 109 l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ms 187 (432)
|++++.|+.|++||+.++..+..+. |...|.+++|+|++ ++++++.|+. +++||+.++..+..+.+|...
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~--------i~i~d~~~~~~~~~~~~~~~~ 332 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS--------VRLWSLKQNTLLALSIVDGVP 332 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE--------EEEEETTTTEEEEEEECTTCC
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc--------EEEEECCCCcEeEecccCCcc
Confidence 9999999999999999998888886 88899999999999 9999999999 666666667776666654321
Q ss_pred hhhHHhhhcccccccccCccccccccceeccCcceeecccchhHHHH
Q psy9319 188 SWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKKKKT 234 (432)
Q Consensus 188 s~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k~~~ 234 (432)
. ......|.+.. ++.+..|..+++||....+..
T Consensus 333 i-----------~~~~~s~~~~~---l~~~~~dg~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 333 I-----------FAGRISQDGQK---YAVAFMDGQVNVYDLKKLNSK 365 (425)
T ss_dssp E-----------EEEEECTTSSE---EEEEETTSCEEEEECHHHHC-
T ss_pred E-----------EEEEEcCCCCE---EEEEECCCeEEEEECCCCccc
Confidence 1 11122344444 778888999999999876533
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.86 E-value=2.7e-20 Score=180.60 Aligned_cols=118 Identities=17% Similarity=0.207 Sum_probs=99.3
Q ss_pred CcccccccCCCC--cceeeeeeecCCCceeEEEEeecCc-ceee-EEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRP--SLYQSSVLTDISPKQLDFKFKEHHK-LEEQ-NILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~--~~l~~s~s~D~~~~~~~i~~~d~~~-~~~~-~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
+.|.+++|+|+. ..++++++.|+.+ .+|+..+ +..+ ..+.+|.+.|++++|+|++.+|++|+.||.|++||
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i-----~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDV-----RCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEE-----EEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcE-----EEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 568999999995 3344888877765 4555554 4444 78889999999999999999999999999999999
Q ss_pred CCCCeeEEEEeeCCCCEEEEEE--eeCCCEEEEEeCCCeEEEEeCCCCcE
Q psy9319 81 AAELTCIRTFQRLDWPVRAISF--SHDGALIASGSEDLTIDIAHVESGKK 128 (432)
Q Consensus 81 ~~~~~~~~~~~~h~~~V~~i~~--spdg~~l~sgs~dg~V~vwd~~~~~~ 128 (432)
+.++..+. +.+|...|.+++| +|++.+|++++.|+.|++||+.++++
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred cCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 99988765 5679999999999 88999999999999999999987653
No 76
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.85 E-value=2.6e-21 Score=192.90 Aligned_cols=210 Identities=13% Similarity=0.054 Sum_probs=137.7
Q ss_pred CCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC--------CCCEEEEEeCCCeEEEEeCCCCe
Q psy9319 14 PRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP--------TGKYFAVGSKDALVSLWDAAELT 85 (432)
Q Consensus 14 p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp--------dg~~L~sgs~dg~I~iwd~~~~~ 85 (432)
|....++++++.|.++++|++..........+..+.||.+.|++++|+| ||++|++|+.|++|+|||+.++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 3344566999999998888776332222233455789999999999998 78999999999999999999888
Q ss_pred eEEEEeeCCCCEEEEEEeeCC-CEEEEEeCCCeEEEEeCCCCcEEEEE--------------------------ecCCce
Q psy9319 86 CIRTFQRLDWPVRAISFSHDG-ALIASGSEDLTIDIAHVESGKKVYDI--------------------------CIQAAT 138 (432)
Q Consensus 86 ~~~~~~~h~~~V~~i~~spdg-~~l~sgs~dg~V~vwd~~~~~~~~~~--------------------------~~~~~V 138 (432)
++..+.+|...|.+++|+|++ .+|++|+.|++|++||+.++...... .|...|
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 888888999999999999976 48999999999999999887654322 245567
Q ss_pred EEEEEc-cCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccc-------cccCccccc
Q psy9319 139 FTVAWH-PKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHR-------ERHQPEDRR 210 (432)
Q Consensus 139 ~~l~fs-pdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~-------er~qp~~r~ 210 (432)
.++.|+ |+|..|++++.|+. +++||+.++.....+.++.............+.+. ....|.. .
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~--------i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 328 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGA--------WLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRY-M 328 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSE--------EEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSC-T
T ss_pred eeeeeecCCCCEEEEEeCCCC--------EEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCC-C
Confidence 888886 79999999999999 55555555544444444332211111100000000 0001110 0
Q ss_pred cccceeccCcceeecccchhHH
Q psy9319 211 KLGLLEKKKDYRVRADHFNKKK 232 (432)
Q Consensus 211 ~~glLe~~~D~~lR~~d~~~k~ 232 (432)
..-+..+..|..+++||....+
T Consensus 329 ~~~~~sgs~Dg~V~lwd~~~~~ 350 (393)
T 4gq1_A 329 DYFATAHSQHGLIQLINTYEKD 350 (393)
T ss_dssp TEEEEEETTTTEEEEEETTCTT
T ss_pred CEEEEEECCCCEEEEEECCCCc
Confidence 1124677889999999987654
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4.5e-21 Score=198.61 Aligned_cols=153 Identities=4% Similarity=-0.045 Sum_probs=131.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc-eeeEEEccCCcCEEEE--EEcCCC-CEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL-EEQNILKAHPVTCICI--EFDPTG-KYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~-~~~~~l~~h~~~V~~l--~~spdg-~~L~sgs~dg~I~iwd 80 (432)
..|.+++|+|++ .+++++.|+++ .+||..++ .+...+.+|..+|+++ +|+|+| .+|+|||.|++|+|||
T Consensus 267 ~~v~sv~~s~~~--~lasgs~DgtV-----~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSPT--TVVCGFKNGFV-----AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSSS--EEEEEETTSEE-----EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCCC--eEEEEeCCCEE-----EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 457889999864 35888888765 55555555 3456789999999999 578888 8999999999999999
Q ss_pred CCCCeeEEEEeeCCC--CEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCC
Q psy9319 81 AAELTCIRTFQRLDW--PVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 81 ~~~~~~~~~~~~h~~--~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
+.++.++..+.+|.. .|.+++|+|++..+++++.|++|++||++++.++..+. |.+.|.+++|+|+|.+|++|+.|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 340 PKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp GGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT
T ss_pred CCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCC
Confidence 998888777777764 58899999999999999999999999999998876664 999999999999999999999999
Q ss_pred eEEEEeC
Q psy9319 158 YDRKQDC 164 (432)
Q Consensus 158 ~I~vwd~ 164 (432)
+|++||+
T Consensus 420 tv~lwd~ 426 (524)
T 2j04_B 420 SLIITNA 426 (524)
T ss_dssp EEECCBS
T ss_pred EEEEEec
Confidence 9999986
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.1e-20 Score=181.16 Aligned_cols=198 Identities=16% Similarity=0.090 Sum_probs=150.9
Q ss_pred CcccccccCCC--CcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPR--PSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~--~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~i 78 (432)
..|.++.|+|+ +..+ ++++.|+.+..|++. ++. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 56 ~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEE-----NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp SCEEEEEECCGGGCSEE-EEEETTSCEEEEEEE-----TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CcEEEEEeCCCCCCCEE-EEeccCCEEEEEEcC-----CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 45788999877 5555 888888877666554 555 77888899999999999999 999999999999999
Q ss_pred EeCCCCe--eEEEEeeCCCCEEEEEEee-------------CCCEEEEEeCCCeEEEEeCCCCcEE----EEEe-cCCce
Q psy9319 79 WDAAELT--CIRTFQRLDWPVRAISFSH-------------DGALIASGSEDLTIDIAHVESGKKV----YDIC-IQAAT 138 (432)
Q Consensus 79 wd~~~~~--~~~~~~~h~~~V~~i~~sp-------------dg~~l~sgs~dg~V~vwd~~~~~~~----~~~~-~~~~V 138 (432)
||+.++. ....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.++... ..+. |...|
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp EECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence 9998763 4556778999999999999 6999999999999999999876532 3343 78899
Q ss_pred EEEEEccC---CcEEEEEECCCeEEEEeCCceEEeecCCCc---eeeeec--CCCchhhhHHhhhcccccccccCccccc
Q psy9319 139 FTVAWHPK---QYLLAYACDDKYDRKQDCGNLKVFGFLPEP---IKKRKR--GGTMSSWVKAAKVNQKTHRERHQPEDRR 210 (432)
Q Consensus 139 ~~l~fspd---g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~---~~~~~~--g~~mss~~~a~~~~~~~h~er~qp~~r~ 210 (432)
.+++|+|+ +.+|++++.|+. +++||+.++. ....+. ++.. ........|.+..
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~--------i~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRT--------CIIWTQDNEQGPWKKTLLKEEKFPD-----------VLWRASWSLSGNV 270 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSC--------EEEEEESSTTSCCEEEESSSSCCSS-----------CEEEEEECSSSCC
T ss_pred eEEEECCCCCCCCeEEEEeCCCE--------EEEEeCCCCCccceeeeeccccCCC-----------cEEEEEEcCCCCE
Confidence 99999999 899999999999 4555554432 111111 1111 1111222355554
Q ss_pred cccceeccCcceeecccchh
Q psy9319 211 KLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 211 ~~glLe~~~D~~lR~~d~~~ 230 (432)
++.+..|..+++|++..
T Consensus 271 ---l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 271 ---LALSGGDNKVTLWKENL 287 (379)
T ss_dssp ---EEEEESSSSEEEEEEEE
T ss_pred ---EEEecCCCcEEEEeCCC
Confidence 77888899999999874
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.85 E-value=4.9e-20 Score=181.80 Aligned_cols=157 Identities=17% Similarity=0.259 Sum_probs=138.4
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc---C---CcCEEEEEEcCCCCEEEEEeCC---C
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA---H---PVTCICIEFDPTGKYFAVGSKD---A 74 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~---h---~~~V~~l~~spdg~~L~sgs~d---g 74 (432)
...|.+++|+|++ .+ ++++.|+ .+.+||..+++.+..+.+ | ...|.+++|+|++.+|++++.| +
T Consensus 186 ~~~i~~~~~~~~~-~l-~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 186 SQFATSVDISERG-LI-ATGFNNG-----TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp CCCCCEEEECTTS-EE-EEECTTS-----EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred CCCceEEEECCCc-eE-EEEeCCC-----cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 4557899999999 54 7766665 567788888999999999 9 9999999999999999999999 9
Q ss_pred eEEEEeCCCCeeEEEEee-------------CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-------c
Q psy9319 75 LVSLWDAAELTCIRTFQR-------------LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-------I 134 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~-------------h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-------~ 134 (432)
.|++||+.++.++..+.+ |...|.+++|+|++.+|++++.||.|++||+.+++++..+. |
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI 338 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSS
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccc
Confidence 999999999999999998 99999999999999999999999999999999999988886 4
Q ss_pred ---------------CCceEEEEEccCC----------cEEEEEECCCeEEEEeCCceEEeecCCC
Q psy9319 135 ---------------QAATFTVAWHPKQ----------YLLAYACDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 135 ---------------~~~V~~l~fspdg----------~~l~s~s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
...|.+++|+|+| .+|++++.|+. |++|++.+|
T Consensus 339 ~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~--------i~iw~~~~g 396 (397)
T 1sq9_A 339 EEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS--------IRWFREAGG 396 (397)
T ss_dssp GGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE--------EEEEEEEC-
T ss_pred hhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc--------EEEEEcCCC
Confidence 7889999999998 79999999999 555655543
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.8e-20 Score=186.66 Aligned_cols=217 Identities=10% Similarity=0.069 Sum_probs=159.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee--------EEEc--c--CCcCEEEEE--EcCCCCEEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ--------NILK--A--HPVTCICIE--FDPTGKYFAVG 70 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~--------~~l~--~--h~~~V~~l~--~spdg~~L~sg 70 (432)
..|.+++|+|++..+ ++++.|+++..|++... .+++.. ..+. . +...+.++. ++|++.+|++|
T Consensus 112 ~~v~~~~~~~~~~~l-~s~s~dg~i~vwd~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 112 STVTQITMIPNFDAF-AVSSKDGQIIVLKVNHY--QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSEEEEEEEEEE--EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEEeCCCCEE-EEEeCCCEEEEEEeccc--cCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 457899999988876 88889988888877421 122222 2222 2 556777777 56889999999
Q ss_pred eCCCeEEEEeCCCCeeEEEEee--CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEc--
Q psy9319 71 SKDALVSLWDAAELTCIRTFQR--LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWH-- 144 (432)
Q Consensus 71 s~dg~I~iwd~~~~~~~~~~~~--h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fs-- 144 (432)
+.|+.|++||+.++.++..+.+ |...|++++|+|++.+|++|+.||.|++||++++.++..+. +...|.+++|+
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 9999999999999999999988 88999999999999999999999999999999999988874 66789999665
Q ss_pred --cCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhccc----------ccccccCc-ccccc
Q psy9319 145 --PKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQK----------THRERHQP-EDRRK 211 (432)
Q Consensus 145 --pdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~----------~h~er~qp-~~r~~ 211 (432)
|++.+|++|+.|+. |++||+.++.++..+.+|.............. .|...... .....
T Consensus 269 ~s~~~~~l~s~~~dg~--------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~ 340 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTF--------LTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSND 340 (437)
T ss_dssp TCTTEEEEEEESTTEE--------EEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETT
T ss_pred cCCCccEEEEEcCCCc--------EEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCc
Confidence 46789999999999 77777777788777777652222111111000 00000000 00001
Q ss_pred ccceeccCcceeecccchhHH
Q psy9319 212 LGLLEKKKDYRVRADHFNKKK 232 (432)
Q Consensus 212 ~glLe~~~D~~lR~~d~~~k~ 232 (432)
.-++.+..|..|++||....+
T Consensus 341 ~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 341 KILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEEEEEGGGTEEEEEETTCGG
T ss_pred eEEEecCCCCeEEEEECCCcc
Confidence 227889999999999987654
No 81
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.85 E-value=3.2e-20 Score=177.86 Aligned_cols=158 Identities=19% Similarity=0.233 Sum_probs=129.6
Q ss_pred CcccccccCCC--CcceeeeeeecCCCceeEEEEeecCcc---------eeeEEEccCCcCEEEEEEcCC--CCEEEEEe
Q psy9319 5 NFIPLLGLNPR--PSLYQSSVLTDISPKQLDFKFKEHHKL---------EEQNILKAHPVTCICIEFDPT--GKYFAVGS 71 (432)
Q Consensus 5 n~I~~l~~~p~--~~~l~~s~s~D~~~~~~~i~~~d~~~~---------~~~~~l~~h~~~V~~l~~spd--g~~L~sgs 71 (432)
..|.+++|+|. +..+ ++++.|+.+..|++. ++ ..+..+.+|.+.|.+++|+|+ +.+|++++
T Consensus 58 ~~v~~~~~~~~~d~~~l-~s~~~dg~v~vwd~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRII-ASASYDKTVKLWEED-----PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp SCEEEEEECCGGGCSEE-EEEETTSCEEEEEEC-----TTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CcEEEEEEcCCCCCCEE-EEEcCCCeEEEEecC-----CCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec
Confidence 45889999994 6555 888888877666654 43 567888999999999999999 99999999
Q ss_pred CCCeEEEEeCCCCe------------------------------------------------------------eEEEEe
Q psy9319 72 KDALVSLWDAAELT------------------------------------------------------------CIRTFQ 91 (432)
Q Consensus 72 ~dg~I~iwd~~~~~------------------------------------------------------------~~~~~~ 91 (432)
.|+.|++||+.++. .+..+.
T Consensus 132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (351)
T 3f3f_A 132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP 211 (351)
T ss_dssp TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC
T ss_pred CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC
Confidence 99999999986432 144556
Q ss_pred eCCCCEEEEEEeeCC----CEEEEEeCCCeEEEEeCCCC-----------------------------------------
Q psy9319 92 RLDWPVRAISFSHDG----ALIASGSEDLTIDIAHVESG----------------------------------------- 126 (432)
Q Consensus 92 ~h~~~V~~i~~spdg----~~l~sgs~dg~V~vwd~~~~----------------------------------------- 126 (432)
+|...|++++|+|++ .+|++|+.||.|++||+.++
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 789999999999998 89999999999999999865
Q ss_pred -----cEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 127 -----KKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 127 -----~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
..+..+. |...|.+++|+|++.+|++++.|+. |++|++.++.
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~--------v~iw~~~~~~ 339 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK--------VRLWKATYSN 339 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSC--------EEEEEECTTS
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCc--------EEEEecCcCc
Confidence 3444444 7889999999999999999999999 5556555543
No 82
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.85 E-value=1.1e-19 Score=182.23 Aligned_cols=203 Identities=17% Similarity=0.247 Sum_probs=163.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEE-----------------------------------EeecCc-ceeeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFK-----------------------------------FKEHHK-LEEQNIL 48 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~-----------------------------------~~d~~~-~~~~~~l 48 (432)
+.|.+++|+|++..+ ++|+.|+++.+|++. +|+... ...+..+
T Consensus 148 ~~V~sv~fspdg~~l-asgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 148 EYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp CCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CcEEEEEECCCCCEE-EEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 568999999999876 888999988777632 233222 2334567
Q ss_pred ccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe----eEEEEeeCCCCEEEEEEeeC-CCEEEEE--eCCCeEEEE
Q psy9319 49 KAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELT----CIRTFQRLDWPVRAISFSHD-GALIASG--SEDLTIDIA 121 (432)
Q Consensus 49 ~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~----~~~~~~~h~~~V~~i~~spd-g~~l~sg--s~dg~V~vw 121 (432)
.+|...+.++.|+|+|.++++++.|+.|++|+..++. .+..+..|...|.+++|+|+ +.+++++ +.|++|++|
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 7888899999999999999999999999999998764 35677789999999999995 4566654 479999999
Q ss_pred eCCCCcEEEEEecCCceEEEEEccCCcEEEEEE--CCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccc
Q psy9319 122 HVESGKKVYDICIQAATFTVAWHPKQYLLAYAC--DDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKT 199 (432)
Q Consensus 122 d~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s--~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~ 199 (432)
|+.++.++..+.....+.++.|+|++..+++++ .|+. |++||+.++.++..+.||......
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~--------I~iwd~~~~~~v~~l~gH~~~V~~--------- 369 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ--------LVIWKYPTMAKVAELKGHTSRVLS--------- 369 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC--------EEEEETTTCCEEEEECCCSSCEEE---------
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE--------EEEEECCCCcEEEEEcCCCCCEEE---------
Confidence 999999999999888999999999999988876 6787 788888889999999988642211
Q ss_pred cccccCccccccccceeccCcceeecccchh
Q psy9319 200 HRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 200 h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
....|++.. +++++.|.+||+||...
T Consensus 370 --l~~spdg~~---l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 370 --LTMSPDGAT---VASAAADETLRLWRCFE 395 (420)
T ss_dssp --EEECTTSSC---EEEEETTTEEEEECCSC
T ss_pred --EEEcCCCCE---EEEEecCCeEEEEECCC
Confidence 222466665 89999999999999865
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.85 E-value=2.8e-20 Score=180.22 Aligned_cols=201 Identities=11% Similarity=0.106 Sum_probs=153.7
Q ss_pred CCcccccccCCCC---cceeeeeeecCCCceeEEEEeecCcce-eeEEEccCCcCEEEEEE------cCCCCEEEEEeCC
Q psy9319 4 QNFIPLLGLNPRP---SLYQSSVLTDISPKQLDFKFKEHHKLE-EQNILKAHPVTCICIEF------DPTGKYFAVGSKD 73 (432)
Q Consensus 4 ~n~I~~l~~~p~~---~~l~~s~s~D~~~~~~~i~~~d~~~~~-~~~~l~~h~~~V~~l~~------spdg~~L~sgs~d 73 (432)
...|.++.|+|++ ..+ ++++.|+. +.+|+..++. .+..+.+|...|.+++| +|++.+|++|+.|
T Consensus 65 ~~~v~~~~~~~~~~~~~~l-~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYL-ATGDFGGN-----LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp SSCEEEEECTTCCTTTCCE-EEEETTSC-----EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred cCcEEEEEEcCCCCCCceE-EEecCCCe-----EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC
Confidence 3567899999984 554 77777765 5667777777 88999999999999954 6899999999999
Q ss_pred CeEEEEeCCCCe-eEEEEeeCCC----CEEEEE----EeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEc
Q psy9319 74 ALVSLWDAAELT-CIRTFQRLDW----PVRAIS----FSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWH 144 (432)
Q Consensus 74 g~I~iwd~~~~~-~~~~~~~h~~----~V~~i~----~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fs 144 (432)
+.|++||+.++. .+..+..|.+ .|.+++ |+|++.+|++++.|+.|++||+.++.......+...|.+++|+
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFD 218 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEES
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcC
Confidence 999999999886 6778876655 799998 7889999999999999999999999988777799999999999
Q ss_pred c---CCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec-----CCCchhhhHHhhhcccccccccCcccccccccee
Q psy9319 145 P---KQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR-----GGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLE 216 (432)
Q Consensus 145 p---dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~-----g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe 216 (432)
| ++.+|++++.|+.|++||+ .++..+..+. +|.... ......|.+.. -++.
T Consensus 219 ~~~~~~~~l~~~~~dg~i~i~d~--------~~~~~~~~~~~~~~~~~~~~v-----------~~~~~~~~~~~--~l~~ 277 (357)
T 3i2n_A 219 RKDISMNKLVATSLEGKFHVFDM--------RTQHPTKGFASVSEKAHKSTV-----------WQVRHLPQNRE--LFLT 277 (357)
T ss_dssp CSSSSCCEEEEEESTTEEEEEEE--------EEEETTTEEEEEEEECCSSCE-----------EEEEEETTEEE--EEEE
T ss_pred CCCCCCCEEEEECCCCeEEEEeC--------cCCCcccceeeeccCCCcCCE-----------EEEEECCCCCc--EEEE
Confidence 9 9999999999999555554 4333222221 332111 11112233331 2788
Q ss_pred ccCcceeecccchhH
Q psy9319 217 KKKDYRVRADHFNKK 231 (432)
Q Consensus 217 ~~~D~~lR~~d~~~k 231 (432)
+..|..+++||....
T Consensus 278 ~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYP 292 (357)
T ss_dssp EETTSEEEEEEEECC
T ss_pred EeCCCcEEEeecCCC
Confidence 899999999998753
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=2.8e-20 Score=187.36 Aligned_cols=200 Identities=15% Similarity=0.171 Sum_probs=153.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCc----------ceeeEEEccCCcCEEEEEEcCCCC-EEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHK----------LEEQNILKAHPVTCICIEFDPTGK-YFAVGSKD 73 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~----------~~~~~~l~~h~~~V~~l~~spdg~-~L~sgs~d 73 (432)
..|.+++|+|++..++++++.|+.+ .+|+..+ ...+..+.+|...|++++|+|++. +|++|+.|
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V-----~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDV-----LVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCE-----EEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred CcEEEEEECCCCCcEEEEECCCCcE-----EEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 5678999999865566888877765 4555544 677889999999999999999988 99999999
Q ss_pred CeEEEEeCCCCee-------EEEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCC---cEEEEE-ecCCceEEE
Q psy9319 74 ALVSLWDAAELTC-------IRTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESG---KKVYDI-CIQAATFTV 141 (432)
Q Consensus 74 g~I~iwd~~~~~~-------~~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~---~~~~~~-~~~~~V~~l 141 (432)
|.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ .++..+ .|...|.++
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999987322 456778999999999999 7889999999999999999987 455556 488999999
Q ss_pred EEccCCc-EEEEEECCCeEEEEeCCceEEeecCC-CceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccC
Q psy9319 142 AWHPKQY-LLAYACDDKYDRKQDCGNLKVFGFLP-EPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKK 219 (432)
Q Consensus 142 ~fspdg~-~l~s~s~d~~I~vwd~~~i~vwd~~~-~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~ 219 (432)
+|+|++. ++++|+.|+. |++||+.+ +..+..+.+|..... .....|.+.. -++.+..
T Consensus 284 ~~~p~~~~~l~tg~~dg~--------v~vwd~~~~~~~~~~~~~h~~~v~-----------~i~~sp~~~~--~l~s~~~ 342 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKT--------VALWDLRNLKLKLHSFESHKDEIF-----------QVQWSPHNET--ILASSGT 342 (430)
T ss_dssp EECSSCTTEEEEEETTSE--------EEEEETTCTTSCSEEEECCSSCEE-----------EEEECSSCTT--EEEEEET
T ss_pred EeCCCCCCEEEEEeCCCe--------EEEEeCCCCCCCeEEeecCCCCEE-----------EEEECCCCCC--EEEEEeC
Confidence 9999986 7889999999 55555544 344555555432111 1112233221 2677888
Q ss_pred cceeecccchh
Q psy9319 220 DYRVRADHFNK 230 (432)
Q Consensus 220 D~~lR~~d~~~ 230 (432)
|..|++||...
T Consensus 343 d~~i~iwd~~~ 353 (430)
T 2xyi_A 343 DRRLHVWDLSK 353 (430)
T ss_dssp TSCCEEEEGGG
T ss_pred CCcEEEEeCCC
Confidence 99999999876
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4.2e-20 Score=199.57 Aligned_cols=201 Identities=13% Similarity=0.161 Sum_probs=158.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~iwd~~ 82 (432)
+.|.+++|+|++..+ ++++.|+++.+|++. ..++..+..+.+|.++|++++|+|+ +.+|++|+.||.|++||+.
T Consensus 10 ~~V~~l~~s~dg~~l-atg~~dg~I~vwd~~---~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 10 ELIHDAVLDYYGKRL-ATCSSDKTIKIFEVE---GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp CCEEEECCCSSSCCE-EEEETTTEEEEEEEE---TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ceeEEEEECCCCCeE-EEEECCCcEEEEecC---CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 568999999999876 777888776666553 1256778899999999999999997 9999999999999999999
Q ss_pred CCe--eEEEEeeCCCCEEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcE---EEEEecCCceEEEEEcc----------
Q psy9319 83 ELT--CIRTFQRLDWPVRAISFSHD--GALIASGSEDLTIDIAHVESGKK---VYDICIQAATFTVAWHP---------- 145 (432)
Q Consensus 83 ~~~--~~~~~~~h~~~V~~i~~spd--g~~l~sgs~dg~V~vwd~~~~~~---~~~~~~~~~V~~l~fsp---------- 145 (432)
++. .+..+.+|...|++++|+|+ +.++++|+.||.|++||+.++.. .....|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 887 67788889999999999999 99999999999999999988732 22234888999999999
Q ss_pred ---CCcEEEEEECCCeEEEEeCCceEEeecCCC----ceeeeecCCCchhhhHHhhhcccccccccCcc---ccccccce
Q psy9319 146 ---KQYLLAYACDDKYDRKQDCGNLKVFGFLPE----PIKKRKRGGTMSSWVKAAKVNQKTHRERHQPE---DRRKLGLL 215 (432)
Q Consensus 146 ---dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~----~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~---~r~~~glL 215 (432)
++.++++|+.||. |++||+.++ .++..+.+|..... .....|. +.. ++
T Consensus 166 ~~~d~~~l~sgs~dg~--------I~iwd~~~~~~~~~~~~~~~~h~~~V~-----------~l~~sp~~~~~~~---l~ 223 (753)
T 3jro_A 166 GTKESRKFVTGGADNL--------VKIWKYNSDAQTYVLESTLEGHSDWVR-----------DVAWSPTVLLRSY---LA 223 (753)
T ss_dssp -CGGGCCEEEEETTSC--------EEEEEEETTTTEEEEEEEECCCSSCEE-----------EEEECCCCSSSEE---EE
T ss_pred cCCCCCEEEEEECCCe--------EEEEeccCCcccceeeeeecCCCCcEE-----------EEEeccCCCCCCE---EE
Confidence 5899999999999 555555544 33444555542211 1122243 334 78
Q ss_pred eccCcceeecccchhH
Q psy9319 216 EKKKDYRVRADHFNKK 231 (432)
Q Consensus 216 e~~~D~~lR~~d~~~k 231 (432)
.+..|..+++||....
T Consensus 224 s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEESSSCEEEEEESSS
T ss_pred EEecCCEEEEecCCCC
Confidence 8999999999998764
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.84 E-value=1.7e-19 Score=187.91 Aligned_cols=122 Identities=17% Similarity=0.179 Sum_probs=110.2
Q ss_pred eeeEEEccCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeEEEEeeCCC---CEEEEEEeeC-CCEEEEEeCCCe
Q psy9319 43 EEQNILKAHPVTCICIEFDPTGK-YFAVGSKDALVSLWDAAELTCIRTFQRLDW---PVRAISFSHD-GALIASGSEDLT 117 (432)
Q Consensus 43 ~~~~~l~~h~~~V~~l~~spdg~-~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~---~V~~i~~spd-g~~l~sgs~dg~ 117 (432)
..+..+.+|...|.+++|+|++. .|++++.|+.|++||+.++.++..+.+|.. .|.+++|+|+ +.+|++++.|+.
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 44555667777888888888876 789999999999999999999999999999 9999999999 999999999999
Q ss_pred EEEEeCCCCcEEEEE-----ecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 118 IDIAHVESGKKVYDI-----CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 118 V~vwd~~~~~~~~~~-----~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
|++||+.+++.+..+ .|...|.+++|+ ++.+|++++.|+.|++||+.
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 999999999999998 788899999999 99999999999998888764
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=8.4e-20 Score=184.68 Aligned_cols=193 Identities=19% Similarity=0.203 Sum_probs=159.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEc--CCCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFD--PTGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~s--pdg~~L~sgs~dg~I~iwd~~ 82 (432)
..|.++.|+|++ ++++++.|+++ .+||..+++++..+.+|.+.|.+++|+ +++.+|++|+.|++|++||+.
T Consensus 163 ~~V~~l~~~~~~--~l~s~s~dg~i-----~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 163 GGVWALKYAHGG--ILVSGSTDRTV-----RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp SCEEEEEECSTT--EEEEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred cCEEEEEEcCCC--EEEEEeCCCCE-----EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence 567889999988 45888888765 566777899999999999999999998 578999999999999999998
Q ss_pred CCee-----------------------EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCce
Q psy9319 83 ELTC-----------------------IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAAT 138 (432)
Q Consensus 83 ~~~~-----------------------~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V 138 (432)
++.. +..+.+|...|.++ +|++.++++|+.|+.|++||+.++.++..+. |...|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v 313 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI 313 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCE
Confidence 7642 55677888888877 6789999999999999999999999998886 88899
Q ss_pred EEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceecc
Q psy9319 139 FTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK 218 (432)
Q Consensus 139 ~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~ 218 (432)
.+++|+|++.++++|+.|+. |++||+.++.++..+.+|....... .. .+. -++.+.
T Consensus 314 ~~~~~~~~~~~l~sg~~dg~--------i~vwd~~~~~~~~~~~~h~~~v~~~-----------~~--~~~---~l~s~s 369 (464)
T 3v7d_B 314 YSTIYDHERKRCISASMDTT--------IRIWDLENGELMYTLQGHTALVGLL-----------RL--SDK---FLVSAA 369 (464)
T ss_dssp EEEEEETTTTEEEEEETTSC--------EEEEETTTTEEEEEECCCSSCEEEE-----------EE--CSS---EEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCc--------EEEEECCCCcEEEEEeCCCCcEEEE-----------EE--cCC---EEEEEe
Confidence 99999999999999999999 7777777888888887775321110 00 112 278889
Q ss_pred Ccceeecccchh
Q psy9319 219 KDYRVRADHFNK 230 (432)
Q Consensus 219 ~D~~lR~~d~~~ 230 (432)
.|..+++||...
T Consensus 370 ~dg~v~vwd~~~ 381 (464)
T 3v7d_B 370 ADGSIRGWDAND 381 (464)
T ss_dssp TTSEEEEEETTT
T ss_pred CCCcEEEEECCC
Confidence 999999999875
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.5e-19 Score=170.19 Aligned_cols=170 Identities=18% Similarity=0.218 Sum_probs=139.2
Q ss_pred EEEeecCcceeeEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeEEEEee-CCCCEEEEEEeeCCCEEEE
Q psy9319 34 FKFKEHHKLEEQNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDAAELTCIRTFQR-LDWPVRAISFSHDGALIAS 111 (432)
Q Consensus 34 i~~~d~~~~~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~~~~~~~~~~~~-h~~~V~~i~~spdg~~l~s 111 (432)
+.+|| .+.....+.+|..++.+++|+| ++.+|++++.|+.|++|| .+.....+.. |...|.+++|+|++. +++
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 200 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FIS 200 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEE
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEE
Confidence 44555 5567778889999999999998 999999999999999999 4566777777 889999999999988 999
Q ss_pred EeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhh
Q psy9319 112 GSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWV 190 (432)
Q Consensus 112 gs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~ 190 (432)
++.|+.|++||+.+++++..+. |...|.+++|+|++ .|++++.|+. |++||+.++..+..+.+|.....
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~--------v~iwd~~~~~~~~~~~~~~~~i~- 270 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT--------VRIWSKENGSLKQVITLPAISIW- 270 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE--------EEEECTTTCCEEEEEECSSSCEE-
T ss_pred ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE--------EEEEECCCCceeEEEeccCceEE-
Confidence 9999999999999999998887 88999999999999 5889999999 77777777777777766642211
Q ss_pred HHhhhcccccccccCccccccccceeccCcceeecccchhHH
Q psy9319 191 KAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKKK 232 (432)
Q Consensus 191 ~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k~ 232 (432)
.....|.+. ++.+..|..+++||....+
T Consensus 271 ----------~~~~~~~~~----~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 271 ----------SVDCMSNGD----IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp ----------EEEECTTSC----EEEEETTSCEEEEESCGGG
T ss_pred ----------EEEEccCCC----EEEEeCCCcEEEEeCCCCc
Confidence 111223332 6778999999999988754
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.8e-20 Score=184.58 Aligned_cols=201 Identities=10% Similarity=0.118 Sum_probs=160.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce------ee---EEEccCCcCEEEEEEcCC-CCEEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE------EQ---NILKAHPVTCICIEFDPT-GKYFAVGSKDA 74 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~------~~---~~l~~h~~~V~~l~~spd-g~~L~sgs~dg 74 (432)
..|.++.|+|++..++++++.|+.+ .+||..++. .. ..+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v-----~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 188 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEI-----FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN 188 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCE-----EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeE-----EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC
Confidence 4678999999844455888888765 555555655 22 234689999999999998 78999999999
Q ss_pred eEEEEeCCCCeeEEEEeeC------CCCEEEEEEeeCC-CEEEEEeCCC---eEEEEeCCCC-cEEEEEe--cCCceEEE
Q psy9319 75 LVSLWDAAELTCIRTFQRL------DWPVRAISFSHDG-ALIASGSEDL---TIDIAHVESG-KKVYDIC--IQAATFTV 141 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~h------~~~V~~i~~spdg-~~l~sgs~dg---~V~vwd~~~~-~~~~~~~--~~~~V~~l 141 (432)
.|++||+.++..+..+..| ...|.+++|+|++ .++++++.|+ .|++||+.++ .++..+. |...|.++
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 268 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSL 268 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEE
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEE
Confidence 9999999999998888876 7889999999987 6899999998 9999999986 5555554 78899999
Q ss_pred EEcc-CCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccc-cccccceeccC
Q psy9319 142 AWHP-KQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPED-RRKLGLLEKKK 219 (432)
Q Consensus 142 ~fsp-dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~-r~~~glLe~~~ 219 (432)
+|+| ++.+|++++.|+. +++||+.++..+..+.+|...... ....|.+ .. ++.+..
T Consensus 269 ~~s~~~~~~l~s~~~dg~--------v~~wd~~~~~~~~~~~~~~~~v~~-----------~~~s~~~~~~---l~s~~~ 326 (416)
T 2pm9_A 269 DWCHQDEHLLLSSGRDNT--------VLLWNPESAEQLSQFPARGNWCFK-----------TKFAPEAPDL---FACASF 326 (416)
T ss_dssp EECSSCSSCEEEEESSSE--------EEEECSSSCCEEEEEECSSSCCCC-----------EEECTTCTTE---EEECCS
T ss_pred EeCCCCCCeEEEEeCCCC--------EEEeeCCCCccceeecCCCCceEE-----------EEECCCCCCE---EEEEec
Confidence 9999 9999999999999 777777788888887776432111 1223433 33 788899
Q ss_pred cceeecccchhHH
Q psy9319 220 DYRVRADHFNKKK 232 (432)
Q Consensus 220 D~~lR~~d~~~k~ 232 (432)
|..+++|+.....
T Consensus 327 d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 327 DNKIEVQTLQNLT 339 (416)
T ss_dssp SSEEEEEESCCCC
T ss_pred CCcEEEEEccCCC
Confidence 9999999987643
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.84 E-value=1.4e-19 Score=182.33 Aligned_cols=208 Identities=18% Similarity=0.190 Sum_probs=152.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc-------eeeEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL-------EEQNILKAHPVTCICIEFDP-TGKYFAVGSKDALV 76 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~-------~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I 76 (432)
..|.+++|+|++..++++++.|+.+..|++ .++ .....+.+|...|.+++|+| ++.+|++++.|+.|
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~-----~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDI-----NATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEET-----TSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeC-----CCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 346889999999855588888877655544 442 22567789999999999999 77899999999999
Q ss_pred EEEeCCCC---eeEEEEeeCCCCEEEEEEeeCCC-EEEEEeCCCeEEEEeCCC-CcEEEEEe-cCCceEEEEEccCC-cE
Q psy9319 77 SLWDAAEL---TCIRTFQRLDWPVRAISFSHDGA-LIASGSEDLTIDIAHVES-GKKVYDIC-IQAATFTVAWHPKQ-YL 149 (432)
Q Consensus 77 ~iwd~~~~---~~~~~~~~h~~~V~~i~~spdg~-~l~sgs~dg~V~vwd~~~-~~~~~~~~-~~~~V~~l~fspdg-~~ 149 (432)
++||+.++ ..+..+..|...|++++|+|++. ++++|+.||.|++||+++ +.++..+. |...|.+++|+|++ .+
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 99999976 57778889999999999999887 789999999999999998 55666665 88999999999998 57
Q ss_pred EEEEECCCeEEEEeCCceEEeec----C--CCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCccee
Q psy9319 150 LAYACDDKYDRKQDCGNLKVFGF----L--PEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRV 223 (432)
Q Consensus 150 l~s~s~d~~I~vwd~~~i~vwd~----~--~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~l 223 (432)
|++++.|+.|++||+.....-.. . ....+..+.+|.... ......|.+. .-++....|..|
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----------~~~~~~p~~~--~~l~s~s~dg~i 403 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI-----------SDFSWNPNEP--WIICSVSEDNIM 403 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE-----------EEEEECSSST--TEEEEEETTSEE
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc-----------eEEEECCCCC--CEEEEEECCCCE
Confidence 99999999955555433110000 0 023444444443111 1111123332 126788899999
Q ss_pred ecccchh
Q psy9319 224 RADHFNK 230 (432)
Q Consensus 224 R~~d~~~ 230 (432)
++|+...
T Consensus 404 ~iw~~~~ 410 (430)
T 2xyi_A 404 QVWQMAE 410 (430)
T ss_dssp EEEEECH
T ss_pred EEeEccc
Confidence 9998865
No 91
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.2e-20 Score=185.28 Aligned_cols=157 Identities=18% Similarity=0.160 Sum_probs=136.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccC------CcCEEEEEEcCCC-CEEEEEeCCC---
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH------PVTCICIEFDPTG-KYFAVGSKDA--- 74 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h------~~~V~~l~~spdg-~~L~sgs~dg--- 74 (432)
..|.++.|+|++..++++++.|+. +.+||..+++.+..+..| ...|.+++|+|++ .+|++++.|+
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~-----v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNF-----ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSC-----EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCC-----EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 457899999996555588777765 567777788888888877 7899999999987 6899999998
Q ss_pred eEEEEeCCCC-eeEEEEe-eCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCC-cE
Q psy9319 75 LVSLWDAAEL-TCIRTFQ-RLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQ-YL 149 (432)
Q Consensus 75 ~I~iwd~~~~-~~~~~~~-~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg-~~ 149 (432)
.|++||+.++ .++..+. +|...|.+++|+| ++.+|++++.|+.|++||+.+++++..+. |...|.+++|+|++ .+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 9999999986 5677777 8999999999999 99999999999999999999999998886 78899999999999 89
Q ss_pred EEEEECCCeEEEEeCCc
Q psy9319 150 LAYACDDKYDRKQDCGN 166 (432)
Q Consensus 150 l~s~s~d~~I~vwd~~~ 166 (432)
|++++.|+.|++||+..
T Consensus 321 l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEECCSSSEEEEEESCC
T ss_pred EEEEecCCcEEEEEccC
Confidence 99999999966666543
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.1e-19 Score=174.37 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=115.7
Q ss_pred eeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy9319 43 EEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAH 122 (432)
Q Consensus 43 ~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd 122 (432)
.....+.+|.+.|++++|+|+|.+|++|+.||.|++||+.++..+..+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 34556899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEecCCceEEEEEccCCcEEEEEECC-----CeEEEEeC
Q psy9319 123 VESGKKVYDICIQAATFTVAWHPKQYLLAYACDD-----KYDRKQDC 164 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d-----~~I~vwd~ 164 (432)
+.+++++..+.+...|.+++|+|++.++++++.+ +.|.+||+
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 9999999999999999999999999999999998 99999985
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.2e-20 Score=187.87 Aligned_cols=158 Identities=12% Similarity=0.018 Sum_probs=126.0
Q ss_pred CCcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCC--CCeeEEEEe--eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q psy9319 51 HPVTCICIEFDPTGKYF-AVGSKDALVSLWDAA--ELTCIRTFQ--RLDWPVRAISFSHDGALIASGSEDLTIDIAHVES 125 (432)
Q Consensus 51 h~~~V~~l~~spdg~~L-~sgs~dg~I~iwd~~--~~~~~~~~~--~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~ 125 (432)
|.+.|++++|+|+|.+| ++|+.|+.|+|||+. ++.++..+. .|...|.+++|+|++.+|++|+.+|.|++|++.+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 44479999999999996 899999999999999 888888876 5678999999999999999999999999999988
Q ss_pred CcEEE----EE-ecCCceEEEEEccC---CcEEEEEECCCeEEEEeCCceEEeecCCCceeee-ecCCCchhhhHHhhhc
Q psy9319 126 GKKVY----DI-CIQAATFTVAWHPK---QYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKR-KRGGTMSSWVKAAKVN 196 (432)
Q Consensus 126 ~~~~~----~~-~~~~~V~~l~fspd---g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~-~~g~~mss~~~a~~~~ 196 (432)
+.... .+ .|...|.+++|+|+ +.+|++|+.|+. |++||+.++.++.. +.+|......
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~--------i~vwd~~~~~~~~~~~~~h~~~v~~------ 246 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH--------IKISHYPQCFIVDKWLFGHKHFVSS------ 246 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC--------EEEEEESCTTCEEEECCCCSSCEEE------
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc--------EEEEECCCCceeeeeecCCCCceEE------
Confidence 76543 33 38889999999999 999999999999 67777777776666 3355321110
Q ss_pred ccccccccCccccccccceeccCcceeecccchhH
Q psy9319 197 QKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 197 ~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
.... .+.. ++.++.|..|++||+...
T Consensus 247 -----~~~s-d~~~---l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 247 -----ICCG-KDYL---LLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp -----EEEC-STTE---EEEEESSSEEEEEETTTC
T ss_pred -----EEEC-CCCE---EEEEeCCCeEEEEECCCC
Confidence 0011 2233 778889999999998764
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.84 E-value=8.1e-21 Score=183.42 Aligned_cols=200 Identities=16% Similarity=0.056 Sum_probs=145.6
Q ss_pred CcccccccCCC--CcceeeeeeecCCCceeEEEEeecCcc--eeeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPR--PSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~--~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~i 78 (432)
+.|.+++|+|. +. ++++|+.|+++.+| |..++ .....+.+|...|.+++|+|+ |.+|++|+.|++|++
T Consensus 58 ~~V~~v~~~~~~~~~-~l~s~s~D~~v~iW-----d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGN-ILASCSYDRKVIIW-----REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp SCEEEEEECCGGGSS-CEEEEETTSCEEEE-----CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred ccEEEEEeCCCCCCC-EEEEEECCCEEEEE-----ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 45788999763 44 45889999876555 55555 456778899999999999997 789999999999999
Q ss_pred EeCCCCee---EEEEeeCCCCEEEEEEeeC-----------------CCEEEEEeCCCeEEEEeCCCC---cEEEEEe-c
Q psy9319 79 WDAAELTC---IRTFQRLDWPVRAISFSHD-----------------GALIASGSEDLTIDIAHVESG---KKVYDIC-I 134 (432)
Q Consensus 79 wd~~~~~~---~~~~~~h~~~V~~i~~spd-----------------g~~l~sgs~dg~V~vwd~~~~---~~~~~~~-~ 134 (432)
||+..+.. ...+.+|...|.+++|+|+ +.+|++|+.|++|++||+..+ .++..+. |
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence 99986532 3455679999999999997 468999999999999999765 3444454 8
Q ss_pred CCceEEEEEccCC----cEEEEEECCCeEEEEeCCceEEeecCCCc-eeeeecCCCchhhhHHhhhcccccccccCcccc
Q psy9319 135 QAATFTVAWHPKQ----YLLAYACDDKYDRKQDCGNLKVFGFLPEP-IKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDR 209 (432)
Q Consensus 135 ~~~V~~l~fspdg----~~l~s~s~d~~I~vwd~~~i~vwd~~~~~-~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r 209 (432)
...|.+++|+|++ .+|++++.|++|++||+.... .+. ....+.+|.. ........|.+.
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~-----~~~~~~~~~~~~~~-----------~v~~v~~sp~g~ 275 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDAS-----SNTWSPKLLHKFND-----------VVWHVSWSITAN 275 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTT-----CCCCBCCEEEECSS-----------CEEEEEECTTTC
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcc-----ccchhhhhhhcCCC-----------cEEEEEEcCCCC
Confidence 8899999999986 899999999995555543200 011 0111122211 111222345554
Q ss_pred ccccceeccCcceeecccch
Q psy9319 210 RKLGLLEKKKDYRVRADHFN 229 (432)
Q Consensus 210 ~~~glLe~~~D~~lR~~d~~ 229 (432)
. ++.+..|..+|+|+..
T Consensus 276 ~---las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 276 I---LAVSGGDNKVTLWKES 292 (316)
T ss_dssp C---EEEEESSSCEEEEEEC
T ss_pred E---EEEEcCCCeEEEEEEC
Confidence 4 7888999999999754
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.3e-20 Score=191.49 Aligned_cols=161 Identities=13% Similarity=0.151 Sum_probs=127.9
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc-----CEEEEEEcCCCCEEEEEeCCCeEE
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV-----TCICIEFDPTGKYFAVGSKDALVS 77 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~-----~V~~l~~spdg~~L~sgs~dg~I~ 77 (432)
+...|.+++|+|+|..+ ++++.|+.+..|+ ... ++..+. |.. .|.+++|||||++|++|+.||+|+
T Consensus 84 ~~~~V~~vawSPdG~~L-As~s~dg~V~iwd-----~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWM-AVLSNNGNVSVFK-----DNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp CSCCEEEEEECSSSSCE-EEEETTSCEEEEE-----TTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCcEEEEEECCCCCEE-EEEeCCCcEEEEe-----CCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 35779999999999988 7888888776555 222 666666 665 499999999999999999999999
Q ss_pred EEeCCCCe-------eEEEE----eeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE---EEEE--ecCCceEEE
Q psy9319 78 LWDAAELT-------CIRTF----QRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK---VYDI--CIQAATFTV 141 (432)
Q Consensus 78 iwd~~~~~-------~~~~~----~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~---~~~~--~~~~~V~~l 141 (432)
|||+.++. .+.++ .+|...|.+++|+|+| +++++.|++|++||+.++.. ...+ .|...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 99999875 35676 5677899999999999 88899999999999988773 3455 366789999
Q ss_pred EEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCC
Q psy9319 142 AWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 142 ~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ 185 (432)
+|+ |..|++++ ++. |++|++.++.......||.
T Consensus 233 aFs--g~~LASa~-~~t--------IkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGY--------VHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp EEE--TTEEEEEC-SSE--------EEEEETTTTEEEEEECSCC
T ss_pred EEE--CCEEEEEe-CCe--------EEEEECCCCeEEEEEcCCC
Confidence 999 68888887 688 6777776655533332554
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.84 E-value=4.7e-20 Score=178.96 Aligned_cols=127 Identities=21% Similarity=0.309 Sum_probs=115.8
Q ss_pred cCcceeeEEEccCCcCEEEEEEcCC---CCEEEEEeCCCeEEEEeCCC-CeeE-EEEeeCCCCEEEEEEeeCCCEEEEEe
Q psy9319 39 HHKLEEQNILKAHPVTCICIEFDPT---GKYFAVGSKDALVSLWDAAE-LTCI-RTFQRLDWPVRAISFSHDGALIASGS 113 (432)
Q Consensus 39 ~~~~~~~~~l~~h~~~V~~l~~spd---g~~L~sgs~dg~I~iwd~~~-~~~~-~~~~~h~~~V~~i~~spdg~~l~sgs 113 (432)
......+..+.+|.+.|++++|+|+ |.+|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++.+|++|+
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 3455667778999999999999998 69999999999999999987 5554 78889999999999999999999999
Q ss_pred CCCeEEEEeCCCCcEEEEEecCCceEEEEE--ccCCcEEEEEECCCeEEEEeCC
Q psy9319 114 EDLTIDIAHVESGKKVYDICIQAATFTVAW--HPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 114 ~dg~V~vwd~~~~~~~~~~~~~~~V~~l~f--spdg~~l~s~s~d~~I~vwd~~ 165 (432)
.||.|++||+.++..+....|...|.+++| +|++.+|++++.|+.|++||+.
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 999999999999998888889999999999 8999999999999999999974
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2e-20 Score=187.83 Aligned_cols=201 Identities=11% Similarity=0.043 Sum_probs=148.7
Q ss_pred CcccccccCC-CCcceeeeeeecCCCceeEEEEeecCc---ce---eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEE
Q psy9319 5 NFIPLLGLNP-RPSLYQSSVLTDISPKQLDFKFKEHHK---LE---EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVS 77 (432)
Q Consensus 5 n~I~~l~~~p-~~~~l~~s~s~D~~~~~~~i~~~d~~~---~~---~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~ 77 (432)
..|.+++|+| ++..+ ++++.|+++..|++ .+ +. ....+ +|.+.|++++|+|++.+|++|+.||+|+
T Consensus 64 ~~V~~~~~s~~~~~~l-~s~s~dg~v~vwd~-----~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 64 NSITSSAVSPGETPYL-ITGSDQGVIKIWNL-----KEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp SCEEEEEEECSSSCEE-EEEETTSEEEEEEH-----HHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceEEEEECCCCCCEE-EEecCCceEEEeEC-----cccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 6789999999 77766 88888876655554 33 22 23333 5999999999999999999999999999
Q ss_pred EEeCC---CCeeEEEEee------------CCCCEEEEE--EeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe---cCCc
Q psy9319 78 LWDAA---ELTCIRTFQR------------LDWPVRAIS--FSHDGALIASGSEDLTIDIAHVESGKKVYDIC---IQAA 137 (432)
Q Consensus 78 iwd~~---~~~~~~~~~~------------h~~~V~~i~--~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~---~~~~ 137 (432)
+||+. ++.....+.+ +...+.++. ++|++.+|++|+.|+.|++||+.+++++..+. |...
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~ 216 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGA 216 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCc
Confidence 99994 4544443332 455677776 55789999999999999999999999988886 6789
Q ss_pred eEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec-CCCchhhhHHhhhcccccccccCcccccccccee
Q psy9319 138 TFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR-GGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLE 216 (432)
Q Consensus 138 V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~-g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe 216 (432)
|.+++|+|++.+|++|+.|+. |++||+.++.++..+. +|.......+. .....|.+.. ++.
T Consensus 217 v~~~~~s~~~~~l~s~~~dg~--------i~iwd~~~~~~~~~~~~~~~~~v~~~~~-------~~~~s~~~~~---l~s 278 (437)
T 3gre_A 217 VSSICIDEECCVLILGTTRGI--------IDIWDIRFNVLIRSWSFGDHAPITHVEV-------CQFYGKNSVI---VVG 278 (437)
T ss_dssp EEEEEECTTSCEEEEEETTSC--------EEEEETTTTEEEEEEBCTTCEEEEEEEE-------CTTTCTTEEE---EEE
T ss_pred eEEEEECCCCCEEEEEcCCCe--------EEEEEcCCccEEEEEecCCCCceEEEEe-------ccccCCCccE---EEE
Confidence 999999999999999999999 6666666666666553 33211000000 0011233334 788
Q ss_pred ccCcceeecccchh
Q psy9319 217 KKKDYRVRADHFNK 230 (432)
Q Consensus 217 ~~~D~~lR~~d~~~ 230 (432)
+..|..+++||...
T Consensus 279 ~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 279 GSSKTFLTIWNFVK 292 (437)
T ss_dssp ESTTEEEEEEETTT
T ss_pred EcCCCcEEEEEcCC
Confidence 99999999999864
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3e-19 Score=169.68 Aligned_cols=201 Identities=15% Similarity=0.102 Sum_probs=160.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
+.|.+++| |++..+ ++++.|+. +.+||..++.....+..|...|.+++|+|++.+|++|+.|+.|++|++...
T Consensus 19 ~~v~~~~~-~~~~~l-~s~~~dg~-----v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 19 QDVRDVVA-VDDSKV-ASVSRDGT-----VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp SCEEEEEE-EETTEE-EEEETTSE-----EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred CCcEEEEe-cCCCEE-EEEEcCCc-----EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 46788999 888776 77777765 456666788888999999999999999999999999999999999998753
Q ss_pred ---eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEcc-CCcEEEEEECCCeE
Q psy9319 85 ---TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHP-KQYLLAYACDDKYD 159 (432)
Q Consensus 85 ---~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fsp-dg~~l~s~s~d~~I 159 (432)
..+..+.+|...|.+++| ++.++++++.|+.|++|| .+..+..+. |...|.+++|+| ++.++++++.|+.|
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 567788899999999999 577999999999999999 666666665 888999999998 89999999999999
Q ss_pred EEEeCC--------------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCcc
Q psy9319 160 RKQDCG--------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPE 207 (432)
Q Consensus 160 ~vwd~~--------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~ 207 (432)
++||.. .+++||+.++..+..+.+|..... .....|.
T Consensus 168 ~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~-----------~~~~~~~ 236 (313)
T 3odt_A 168 KLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVY-----------CIKLLPN 236 (313)
T ss_dssp EEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-----------EEEECTT
T ss_pred EEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEE-----------EEEEecC
Confidence 999853 267777777777766665542111 1112233
Q ss_pred ccccccceeccCcceeecccchhH
Q psy9319 208 DRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 208 ~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
+ . ++.+..|..+++||....
T Consensus 237 ~-~---l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 237 G-D---IVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp S-C---EEEEETTSEEEEECTTTC
T ss_pred C-C---EEEEecCCEEEEEECCCC
Confidence 3 2 788899999999997653
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.83 E-value=6e-20 Score=177.86 Aligned_cols=202 Identities=12% Similarity=0.122 Sum_probs=149.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEE-ccCCcCEEEEEEcCC---CCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNIL-KAHPVTCICIEFDPT---GKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l-~~h~~~V~~l~~spd---g~~L~sgs~dg~I~iwd 80 (432)
+.|.+++|+|++..++++++.+. ....+.+|+..+++..... .+|..+|.+++|+|+ |.+|++|+.|+.|++||
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CceEEEEEcCCCceEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 46899999999987877776521 1345666776677665443 378999999999998 79999999999999999
Q ss_pred CCCCe-eEEEEeeCCCCEEEEEE------eeCCCEEEEEeCCCeEEEEeCCCCc-EEEEEe-cC----CceEEEE----E
Q psy9319 81 AAELT-CIRTFQRLDWPVRAISF------SHDGALIASGSEDLTIDIAHVESGK-KVYDIC-IQ----AATFTVA----W 143 (432)
Q Consensus 81 ~~~~~-~~~~~~~h~~~V~~i~~------spdg~~l~sgs~dg~V~vwd~~~~~-~~~~~~-~~----~~V~~l~----f 143 (432)
+.++. .+..+.+|...|.++.| +|++.+|++|+.|+.|++||+.++. .+..+. +. ..|.+++ |
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 99888 88899999999999955 6889999999999999999999887 566664 33 3788888 7
Q ss_pred ccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCc---cccccccceeccCc
Q psy9319 144 HPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQP---EDRRKLGLLEKKKD 220 (432)
Q Consensus 144 spdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp---~~r~~~glLe~~~D 220 (432)
+|++.++++++.|+. +++||+.++...... ++.. ........| .+.. ++.+..|
T Consensus 177 ~~~~~~l~~~~~d~~--------i~i~d~~~~~~~~~~-~~~~-----------~v~~~~~~~~~~~~~~---l~~~~~d 233 (357)
T 3i2n_A 177 NQEERVVCAGYDNGD--------IKLFDLRNMALRWET-NIKN-----------GVCSLEFDRKDISMNK---LVATSLE 233 (357)
T ss_dssp C-CCCEEEEEETTSE--------EEEEETTTTEEEEEE-ECSS-----------CEEEEEESCSSSSCCE---EEEEEST
T ss_pred CCCCCEEEEEccCCe--------EEEEECccCceeeec-CCCC-----------ceEEEEcCCCCCCCCE---EEEECCC
Confidence 899999999999999 555555554443221 1111 011111223 3333 7788889
Q ss_pred ceeecccchhH
Q psy9319 221 YRVRADHFNKK 231 (432)
Q Consensus 221 ~~lR~~d~~~k 231 (432)
..+++||....
T Consensus 234 g~i~i~d~~~~ 244 (357)
T 3i2n_A 234 GKFHVFDMRTQ 244 (357)
T ss_dssp TEEEEEEEEEE
T ss_pred CeEEEEeCcCC
Confidence 99999998764
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.7e-20 Score=191.02 Aligned_cols=158 Identities=14% Similarity=0.150 Sum_probs=123.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCc--------------eeEEE--------EeecCcceeeEEEc-cCCcCEEEEEEc
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPK--------------QLDFK--------FKEHHKLEEQNILK-AHPVTCICIEFD 61 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~--------------~~~i~--------~~d~~~~~~~~~l~-~h~~~V~~l~~s 61 (432)
.-|.+++|+|+|.++ ++++.|.+++ .|.+. .|+..+++....+. +|...|.+++||
T Consensus 16 ~~v~sv~~SpDG~~i-ASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawS 94 (588)
T 2j04_A 16 DWKNNLTWARDGTLY-LTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPS 94 (588)
T ss_dssp SSSCCEEECTTSCEE-EECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEEC
T ss_pred ccEEEEEECCCCCEE-EEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEEC
Confidence 346889999999987 8888888872 12222 12233333333333 567889999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCC-----CEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc-------EE
Q psy9319 62 PTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDW-----PVRAISFSHDGALIASGSEDLTIDIAHVESGK-------KV 129 (432)
Q Consensus 62 pdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~-----~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~-------~~ 129 (432)
|+|.+||+++.||.|++||..+ ++..+. |.. .|.+++|||||++|++|+.||+|++||+.++. .+
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceee
Confidence 9999999999999999999654 666666 665 49999999999999999999999999999885 25
Q ss_pred EEEe-----cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 130 YDIC-----IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 130 ~~~~-----~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
..+. |...|.+++|+|+| +++++.|++ +++|++.++.
T Consensus 172 ~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t--------VrlWd~~~~~ 213 (588)
T 2j04_A 172 SSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS--------VFSMTVSASS 213 (588)
T ss_dssp EEEECSCTTCCCCEEEEEEETTE--EEEEETTCC--------EEEECCCSSS
T ss_pred eeeecccccccccEEEEEEcCCc--EEEEeCCCe--------EEEEECCCCc
Confidence 5652 55689999999999 888899999 6677766655
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.83 E-value=7e-19 Score=175.15 Aligned_cols=192 Identities=15% Similarity=0.179 Sum_probs=149.0
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA-HPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~ 86 (432)
.++.|++ ..+ ++++.|+ .+.+|+..++.....+.. |...|++++|+|+|.+|++|+.||.|++||+.++..
T Consensus 97 ~~~~~s~--~~l-~~~~~d~-----~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 97 NLLDWSN--LNV-VAVALER-----NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK 168 (401)
T ss_dssp BCEEECT--TSE-EEEEETT-----EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEeecC--CCE-EEEECCC-----eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE
Confidence 4455655 334 4555665 467788888888877776 889999999999999999999999999999999999
Q ss_pred EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC-CCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 87 IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVE-SGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 87 ~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~-~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
+..+.+|...|.+++| ++.+|++|+.||.|++||+. .+..+..+. |.+.|.+++|+|++.+|++|+.|+.
T Consensus 169 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~------ 240 (401)
T 4aez_A 169 LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV------ 240 (401)
T ss_dssp EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe------
Confidence 9999999999999999 46799999999999999998 455566665 8899999999999999999999999
Q ss_pred CceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCcccccccccee--ccCcceeecccchh
Q psy9319 165 GNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLE--KKKDYRVRADHFNK 230 (432)
Q Consensus 165 ~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe--~~~D~~lR~~d~~~ 230 (432)
|++||+.++..+..+.+|..... .....|.+... +.. +..|..+++||...
T Consensus 241 --v~iwd~~~~~~~~~~~~~~~~v~-----------~~~~~p~~~~l--l~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 241 --VQIWDARSSIPKFTKTNHNAAVK-----------AVAWCPWQSNL--LATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp --EEEEETTCSSEEEEECCCSSCCC-----------EEEECTTSTTE--EEEECCTTTCEEEEEETTT
T ss_pred --EEEccCCCCCccEEecCCcceEE-----------EEEECCCCCCE--EEEecCCCCCEEEEEECCC
Confidence 66666666776666655532111 11122333331 233 34799999999865
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.83 E-value=1.6e-19 Score=188.12 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=160.0
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcc----eeeEEEccCCcC-EEEEEEcC--CCCEEEEEeCCCeE
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL----EEQNILKAHPVT-CICIEFDP--TGKYFAVGSKDALV 76 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~----~~~~~l~~h~~~-V~~l~~sp--dg~~L~sgs~dg~I 76 (432)
.+.|.+++|+|++..++++ + |+ .+.+|+..++ .....+.+|... |++++|+| ++.+|++|+.||.|
T Consensus 18 ~~~v~~~~~spdg~~l~~~-~-~~-----~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYP-C-GK-----SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp TTCCCCCEEETTTTEEEEE-E-TT-----EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred cCceeEEEECCCCCEEEEe-c-CC-----eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 3568999999999987444 3 33 5778888888 899999999999 99999999 99999999999999
Q ss_pred EEEeCCCC--------eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----CeEEEEeCCCCcEEEEEe-cCCceEEEEE
Q psy9319 77 SLWDAAEL--------TCIRTFQRLDWPVRAISFSHDGALIASGSED----LTIDIAHVESGKKVYDIC-IQAATFTVAW 143 (432)
Q Consensus 77 ~iwd~~~~--------~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----g~V~vwd~~~~~~~~~~~-~~~~V~~l~f 143 (432)
++||+.++ .....+..|...|.+++|+|++.+|++++.+ +.|++|| .+..+..+. |...|.+++|
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~ 168 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHL 168 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEE
Confidence 99999754 6677888899999999999999999999987 7888888 566777665 8889999999
Q ss_pred ccCCc-EEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCcc-ccccccceeccCcc
Q psy9319 144 HPKQY-LLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPE-DRRKLGLLEKKKDY 221 (432)
Q Consensus 144 spdg~-~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~-~r~~~glLe~~~D~ 221 (432)
+|++. .+++++.|+. +++||+.++..+..+.+|..... ........|. +.. ++.+..|.
T Consensus 169 ~~~~~~~l~~~~~d~~--------v~vwd~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~---l~~~~~dg 229 (615)
T 1pgu_A 169 KQSRPMRSMTVGDDGS--------VVFYQGPPFKFSASDRTHHKQGS--------FVRDVEFSPDSGEF---VITVGSDR 229 (615)
T ss_dssp CSSSSCEEEEEETTTE--------EEEEETTTBEEEEEECSSSCTTC--------CEEEEEECSTTCCE---EEEEETTC
T ss_pred CCCCCcEEEEEeCCCc--------EEEEeCCCcceeeeecccCCCCc--------eEEEEEECCCCCCE---EEEEeCCC
Confidence 99997 8999999999 66666777777777766543100 0111122344 444 77888899
Q ss_pred eeecccchh
Q psy9319 222 RVRADHFNK 230 (432)
Q Consensus 222 ~lR~~d~~~ 230 (432)
.+++||...
T Consensus 230 ~i~vwd~~~ 238 (615)
T 1pgu_A 230 KISCFDGKS 238 (615)
T ss_dssp CEEEEETTT
T ss_pred eEEEEECCC
Confidence 999999764
No 103
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.6e-20 Score=202.96 Aligned_cols=166 Identities=13% Similarity=0.001 Sum_probs=131.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee----EE--Ec-----cCCcCEEEEEEcCCCCEEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ----NI--LK-----AHPVTCICIEFDPTGKYFAVGSKD 73 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~----~~--l~-----~h~~~V~~l~~spdg~~L~sgs~d 73 (432)
..+..++|+|++..+ ++++.|++++.|++ .++... .. +. +|...|++++|+|||++||+|+.|
T Consensus 436 ~~v~sv~~spdg~~l-aSgs~DgtVrlWd~-----~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 436 RTKRQKLPAEYGTAF-ITGHSNGSVRIYDA-----SHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp CCCCCCCCCSEEEEE-EEEETTSEEEEEES-----SCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred CCCCcccccccCcEE-EEecCCCcEEEEEC-----CCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 445678899988866 88898887655554 444211 11 12 899999999999999999999999
Q ss_pred CeEEEEeCCCC---------------------------------------------eeEEEEeeCCCCEEEEEEeeCCCE
Q psy9319 74 ALVSLWDAAEL---------------------------------------------TCIRTFQRLDWPVRAISFSHDGAL 108 (432)
Q Consensus 74 g~I~iwd~~~~---------------------------------------------~~~~~~~~h~~~V~~i~~spdg~~ 108 (432)
|+|+|||+.++ .++..+.+|.+.|++++||||| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 99999998765 2467788899999999999999 9
Q ss_pred EEEEeCCCeEEEEeCCCCcEEEE--E-----ecCCceEEEEEc-----cCC---cEEEEEECCCeEEEEeCCceEEeec-
Q psy9319 109 IASGSEDLTIDIAHVESGKKVYD--I-----CIQAATFTVAWH-----PKQ---YLLAYACDDKYDRKQDCGNLKVFGF- 172 (432)
Q Consensus 109 l~sgs~dg~V~vwd~~~~~~~~~--~-----~~~~~V~~l~fs-----pdg---~~l~s~s~d~~I~vwd~~~i~vwd~- 172 (432)
||+|+.|++|++||+.++..+.. + .|...|++++|+ ||| .+|++|+.|++ |++|++
T Consensus 589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~t--------v~~wd~~ 660 (902)
T 2oaj_A 589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGE--------VITYKIL 660 (902)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSE--------EEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCc--------EEEEEEe
Confidence 99999999999999988776542 1 366779999999 885 89999999999 555555
Q ss_pred --CCCceeeeecCCC
Q psy9319 173 --LPEPIKKRKRGGT 185 (432)
Q Consensus 173 --~~~~~~~~~~g~~ 185 (432)
.+|.++..+.+|.
T Consensus 661 p~~~g~~~~~~~~~~ 675 (902)
T 2oaj_A 661 PASGGKFDVQLMDIT 675 (902)
T ss_dssp ECGGGCEEEEEEEEE
T ss_pred cCCCCcEEEEecCce
Confidence 4566666666553
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.83 E-value=2.5e-19 Score=202.88 Aligned_cols=206 Identities=18% Similarity=0.203 Sum_probs=158.5
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC--CCCEEEEEeCCCeEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP--TGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp--dg~~L~sgs~dg~I~iwd~ 81 (432)
...|.+++|+|++..+ ++++.|+ .+.+||..+++.+..+.+|...|.+++|+| ++.++++|+.|+.|++||+
T Consensus 657 ~~~v~~~~~s~~~~~l-~s~~~d~-----~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~ 730 (1249)
T 3sfz_A 657 EDEVLCCAFSSDDSYI-ATCSADK-----KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDL 730 (1249)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTS-----EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEET
T ss_pred CCCEEEEEEecCCCEE-EEEeCCC-----eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEEC
Confidence 3568899999999877 6766665 467788889999999999999999999999 5568999999999999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec--------------CCceEEEEEccCC
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI--------------QAATFTVAWHPKQ 147 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~--------------~~~V~~l~fspdg 147 (432)
.++.++..+.+|.+.|++++|+|++.+|++|+.||+|++||+.++.....+.. ...+.+++|+|+|
T Consensus 731 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg 810 (1249)
T 3sfz_A 731 NQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG 810 (1249)
T ss_dssp TSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTS
T ss_pred CCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCC
Confidence 99999999999999999999999999999999999999999988776555421 1134445555555
Q ss_pred cEEEEEECCCeEEEEeCC-----------------------------------ceEEeecCCCceeeeecCCCchhhhHH
Q psy9319 148 YLLAYACDDKYDRKQDCG-----------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKA 192 (432)
Q Consensus 148 ~~l~s~s~d~~I~vwd~~-----------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a 192 (432)
..+++++ ++.+.+||+. .+.+|++.++..+..+.+|.....
T Consensus 811 ~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~--- 886 (1249)
T 3sfz_A 811 DKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVH--- 886 (1249)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEE---
T ss_pred CEEEEEc-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceE---
Confidence 5555444 3445555431 277788888888777777653211
Q ss_pred hhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 193 AKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 193 ~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
.....|.+.. ++.++.|..+++|+...
T Consensus 887 --------~v~~spdg~~---l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 887 --------GVMFSPDGSS---FLTASDDQTIRVWETKK 913 (1249)
T ss_dssp --------EEEECTTSSE---EEEEETTSCEEEEEHHH
T ss_pred --------EEEECCCCCE---EEEEeCCCeEEEEEccc
Confidence 1222344444 88899999999998653
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.82 E-value=9.9e-20 Score=176.26 Aligned_cols=138 Identities=9% Similarity=-0.046 Sum_probs=108.5
Q ss_pred eeeeeecCCCceeEEEEeecCcceeeEEEccCC---cCEEEEEEcCCCCEE------------EEEeCCCeEEEEeCCCC
Q psy9319 20 QSSVLTDISPKQLDFKFKEHHKLEEQNILKAHP---VTCICIEFDPTGKYF------------AVGSKDALVSLWDAAEL 84 (432)
Q Consensus 20 ~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~---~~V~~l~~spdg~~L------------~sgs~dg~I~iwd~~~~ 84 (432)
+++++.|++ |++||..+++++.++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..++
T Consensus 196 LaSgS~D~T-----IkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 196 LLGTTIMNN-----IVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp EEEEETTSE-----EEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred EEEecCCCc-----EEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 477777765 4677778999999998754 467788999999876 56888999999999999
Q ss_pred eeEEEE-----eeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceE-EEEEccCCcEEEEEECCC
Q psy9319 85 TCIRTF-----QRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATF-TVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 85 ~~~~~~-----~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~-~l~fspdg~~l~s~s~d~ 157 (432)
.++..+ .+|...+.+..+ ++.++++|+.|++|+|||+.+++++.++. |...+. +++|+|||.+|++|+.|+
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred EEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 987766 366666554444 48899999999999999999999999996 655554 689999999999999999
Q ss_pred eEEEEeC
Q psy9319 158 YDRKQDC 164 (432)
Q Consensus 158 ~I~vwd~ 164 (432)
+|++||+
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9666653
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.2e-19 Score=176.81 Aligned_cols=153 Identities=10% Similarity=0.018 Sum_probs=124.5
Q ss_pred CcccccccCC--CCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNP--RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA-HPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p--~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~-h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
..|.++.++| ++..+ ++++.|+++ .+||..+++....+.. |...|++++|+|+|.+|++|+.||.|++||+
T Consensus 126 ~~v~~~~~~~~~~~~~l-~s~s~dg~i-----~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYF-IWADNRGTI-----GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp SCEEEEECCC---CCEE-EEEETTCCE-----EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred CCEEEEEcCCCCCCCEE-EEEeCCCcE-----EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 5688999999 88766 788888765 5566667887766644 5568999999999999999999999999999
Q ss_pred CCCeeE-EEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe----cCCce--EEEEEccCCcEEEEE
Q psy9319 82 AELTCI-RTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC----IQAAT--FTVAWHPKQYLLAYA 153 (432)
Q Consensus 82 ~~~~~~-~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~----~~~~V--~~l~fspdg~~l~s~ 153 (432)
.++..+ ..+.. |.++|++++|+|+|.+|++++ |+.|++||++++.++..+. +...+ .+++|+|+|.+|+++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 999887 78888 999999999999999999999 4599999999987654432 22333 369999999999999
Q ss_pred EC-CCeEEEEeC
Q psy9319 154 CD-DKYDRKQDC 164 (432)
Q Consensus 154 s~-d~~I~vwd~ 164 (432)
+. |+.|++|+.
T Consensus 279 s~~d~~i~v~~~ 290 (343)
T 3lrv_A 279 SNESNSLTIYKF 290 (343)
T ss_dssp ETTTTEEEEEEE
T ss_pred cCCCCcEEEEEE
Confidence 98 999666655
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=7.8e-20 Score=201.11 Aligned_cols=206 Identities=10% Similarity=0.054 Sum_probs=156.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.+++|+|++.++ ++++.|++ |++|+..+......+ .|..+|.+++|+| |.+|++++.|++|+|||+.++
T Consensus 18 ~~V~~lafspdg~~l-Asgs~Dg~-----I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLL-AIATVTGE-----VHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp SCEEEEEEETTTTEE-EEEETTSE-----EEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred CCcEEEEECCCCCEE-EEEeCCCE-----EEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 468999999999876 78887764 566676666665544 5788999999999 889999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEE-----------E-ecCCceEEEEEccC-CcEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYD-----------I-CIQAATFTVAWHPK-QYLLA 151 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~-----------~-~~~~~V~~l~fspd-g~~l~ 151 (432)
.++..+. |...|++++|+|++.+|++|+.||.|++||+.++.+... + .|.+.|.+++|+|+ +..++
T Consensus 90 ~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 90 KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 9988886 778999999999999999999999999999998876411 1 26788999999996 57899
Q ss_pred EEECCCeEEEEeCCceEEeecCCCceeeeecCCCch----hh---hHHhhhcccccccccCccccccccceeccCcceee
Q psy9319 152 YACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMS----SW---VKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVR 224 (432)
Q Consensus 152 s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ms----s~---~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR 224 (432)
+|+.|+. + +||+.++.++..+.++.-. .. .....+..........|.+.. ++.++.|..++
T Consensus 169 ~g~~dg~--------v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~---lasgs~Dg~i~ 236 (902)
T 2oaj_A 169 ISYEYVT--------L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH---IITIHEDNSLV 236 (902)
T ss_dssp EECSSCE--------E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE---EEEEETTCCEE
T ss_pred EEeCCCc--------E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE---EEEEECCCeEE
Confidence 9999999 6 6777777766666554100 00 000000011222333455554 88999999999
Q ss_pred cccchhH
Q psy9319 225 ADHFNKK 231 (432)
Q Consensus 225 ~~d~~~k 231 (432)
+||....
T Consensus 237 lWd~~~g 243 (902)
T 2oaj_A 237 FWDANSG 243 (902)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998764
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.82 E-value=6.6e-19 Score=178.08 Aligned_cols=191 Identities=17% Similarity=0.175 Sum_probs=150.9
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeE
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCI 87 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~ 87 (432)
.++.+ ++.. +++++.|+++ ++||..+++.+..+.+|.+.|++++|+|++ .|++|+.||+|++||+.++.++
T Consensus 126 ~~~~~--~~~~-l~sgs~dg~i-----~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 126 TCLQF--EDNY-VITGADDKMI-----RVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp EEEEE--ETTE-EEEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEE--CCCE-EEEEcCCCcE-----EEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE
Confidence 44444 3444 4888887765 666778999999999999999999999988 9999999999999999999999
Q ss_pred EEEeeCCCCEEEEEEee--CCCEEEEEeCCCeEEEEeCCCCcEE-----------------------EEEe-cCCceEEE
Q psy9319 88 RTFQRLDWPVRAISFSH--DGALIASGSEDLTIDIAHVESGKKV-----------------------YDIC-IQAATFTV 141 (432)
Q Consensus 88 ~~~~~h~~~V~~i~~sp--dg~~l~sgs~dg~V~vwd~~~~~~~-----------------------~~~~-~~~~V~~l 141 (432)
..+.+|...|.+++|+| ++.++++|+.|++|++||+.++... ..+. |...|.++
T Consensus 197 ~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 276 (464)
T 3v7d_B 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 276 (464)
T ss_dssp EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE
T ss_pred EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE
Confidence 99999999999999995 7789999999999999999877532 2222 66667665
Q ss_pred EEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcc
Q psy9319 142 AWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDY 221 (432)
Q Consensus 142 ~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~ 221 (432)
+|++.++++|+.|+. |++||+.++..+..+.+|...... ....|.+.. ++.+..|.
T Consensus 277 --~~~~~~l~~~~~d~~--------i~vwd~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~---l~sg~~dg 332 (464)
T 3v7d_B 277 --SGHGNIVVSGSYDNT--------LIVWDVAQMKCLYILSGHTDRIYS-----------TIYDHERKR---CISASMDT 332 (464)
T ss_dssp --EEETTEEEEEETTSC--------EEEEETTTTEEEEEECCCSSCEEE-----------EEEETTTTE---EEEEETTS
T ss_pred --cCCCCEEEEEeCCCe--------EEEEECCCCcEEEEecCCCCCEEE-----------EEEcCCCCE---EEEEeCCC
Confidence 678999999999999 667777777777777766432111 111233334 78899999
Q ss_pred eeecccchhH
Q psy9319 222 RVRADHFNKK 231 (432)
Q Consensus 222 ~lR~~d~~~k 231 (432)
.+++||....
T Consensus 333 ~i~vwd~~~~ 342 (464)
T 3v7d_B 333 TIRIWDLENG 342 (464)
T ss_dssp CEEEEETTTT
T ss_pred cEEEEECCCC
Confidence 9999998754
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.82 E-value=6.8e-19 Score=177.17 Aligned_cols=195 Identities=16% Similarity=0.228 Sum_probs=154.8
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~ 86 (432)
|.++.+ ++..+ ++++.|+.+ .+||..+++....+.+|.+.|++++| ++.+|++|+.||+|++||+.++.+
T Consensus 136 v~~~~~--d~~~l-~~g~~dg~i-----~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 136 VYCLQY--DDQKI-VSGLRDNTI-----KIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp EEEEEC--CSSEE-EEEESSSCE-----EEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred EEEEEE--CCCEE-EEEeCCCeE-----EEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 455544 56555 777777654 56677789999999999999999988 788999999999999999999999
Q ss_pred EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEE---EEE-ecCCceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 87 IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKV---YDI-CIQAATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 87 ~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~---~~~-~~~~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
+..+.+|...|.+++|++ .++++|+.||.|++||+.++..+ ..+ .|...|.+++| ++.++++|+.|+.|++|
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 999999999999999974 59999999999999999988765 333 38888999999 68899999999999999
Q ss_pred eCC--------------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccc
Q psy9319 163 DCG--------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRR 210 (432)
Q Consensus 163 d~~--------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~ 210 (432)
|+. .|++||+.++.++..+.+|....... . ..+.
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~-----------~--~~~~- 347 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-----------R--FDNK- 347 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-----------E--CCSS-
T ss_pred ECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEE-----------E--ecCC-
Confidence 863 36777777777777666654221100 0 0112
Q ss_pred cccceeccCcceeecccchhH
Q psy9319 211 KLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 211 ~~glLe~~~D~~lR~~d~~~k 231 (432)
-++.+..|..+++||....
T Consensus 348 --~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 348 --RIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp --EEEEEETTSCEEEEEHHHH
T ss_pred --EEEEEeCCCcEEEEECCCC
Confidence 2788899999999998653
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.6e-19 Score=193.30 Aligned_cols=198 Identities=16% Similarity=0.080 Sum_probs=152.2
Q ss_pred CcccccccCCC--CcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCC--CCEEEEEeCCCeEEE
Q psy9319 5 NFIPLLGLNPR--PSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPT--GKYFAVGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~--~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spd--g~~L~sgs~dg~I~i 78 (432)
..|.++.|+|+ +..+ ++++.|+.+..|++. ++. .+..+.+|..+|++++|+|+ |.+|++|+.||.|++
T Consensus 54 ~~V~~l~~s~~~~~~~l-~s~s~Dg~I~vwd~~-----~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEE-----NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp SCEEEEEECCTTSCSEE-EEEETTSCEEEEEEE-----TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CceEEEEecCCCCCCEE-EEEeCCCeEEEEECC-----CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 46889999987 6555 888889887666654 554 77888999999999999999 999999999999999
Q ss_pred EeCCCC--eeEEEEeeCCCCEEEEEEee-------------CCCEEEEEeCCCeEEEEeCCCCc----EEEEEe-cCCce
Q psy9319 79 WDAAEL--TCIRTFQRLDWPVRAISFSH-------------DGALIASGSEDLTIDIAHVESGK----KVYDIC-IQAAT 138 (432)
Q Consensus 79 wd~~~~--~~~~~~~~h~~~V~~i~~sp-------------dg~~l~sgs~dg~V~vwd~~~~~----~~~~~~-~~~~V 138 (432)
||+.++ .....+.+|...|.+++|+| ++.++++|+.||.|++||+.++. +...+. |...|
T Consensus 128 wdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp EECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE
Confidence 999876 34566778999999999999 58999999999999999998874 334444 88899
Q ss_pred EEEEEccC---CcEEEEEECCCeEEEEeCCceEEeecCCCce-----eeeecCCCchhhhHHhhhcccccccccCccccc
Q psy9319 139 FTVAWHPK---QYLLAYACDDKYDRKQDCGNLKVFGFLPEPI-----KKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRR 210 (432)
Q Consensus 139 ~~l~fspd---g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~-----~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~ 210 (432)
.+++|+|+ +.+|++|+.||. |++||+.++.. +....++.. ........|.+..
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~--------I~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~l~~spdg~~ 268 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRT--------CIIWTQDNEQGPWKKTLLKEEKFPD-----------VLWRASWSLSGNV 268 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSC--------EEEEEESSSSSCCBCCBSSSSCCSS-----------CCCCEEECTTTCC
T ss_pred EEEEeccCCCCCCEEEEEecCCE--------EEEecCCCCCCcceeEEeccCCCCC-----------ceEEEEEcCCCCE
Confidence 99999999 999999999999 55555554321 111111111 1111222345444
Q ss_pred cccceeccCcceeecccchh
Q psy9319 211 KLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 211 ~~glLe~~~D~~lR~~d~~~ 230 (432)
++.+..|..+++|++..
T Consensus 269 ---l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 269 ---LALSGGDNKVTLWKENL 285 (753)
T ss_dssp ---EEEECSSSCEECCBCCS
T ss_pred ---EEEEcCCCEEEEEecCC
Confidence 78888999999999873
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.81 E-value=2.1e-18 Score=172.87 Aligned_cols=196 Identities=17% Similarity=0.202 Sum_probs=145.8
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK--AHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
+++.++|++++ ++ +.+ .|. .|++||..+++....+. +|...|+|++|+|+|.+|++|+.||+|+|||+.+
T Consensus 107 y~~~l~wS~~n-~l-Avg-ld~-----tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSGN-VL-AVA-LDN-----SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTTS-EE-EEE-ETT-----EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cceeEEECCCC-EE-EEE-eCC-----EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 35778999754 44 444 355 56888888998877665 6778899999999999999999999999999999
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc-EEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGK-KVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRK 161 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~-~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~v 161 (432)
+.++..+.+|...+.+++| ++.+|++|+.|+.+++||..... .+..+. |...+..+.|+|+|.++++++.|+.
T Consensus 179 ~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~--- 253 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL--- 253 (420)
T ss_dssp TEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC---
T ss_pred CcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecccc---
Confidence 9999999999999998876 46799999999999999998754 444554 8889999999999999999999999
Q ss_pred EeCCceEEeecCCCce----eeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 162 QDCGNLKVFGFLPEPI----KKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 162 wd~~~i~vwd~~~~~~----~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
+.+|+..++.. +....+|..... .....|.....+-...+..|..||+||...
T Consensus 254 -----v~i~~~~~~~~~~~~~~~~~~~~~~V~-----------~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 254 -----VNVWPSAPGEGGWVPLQTFTQHQGAVK-----------AVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp -----EEEEESSCCSSCSCCSEEECCCSSCEE-----------EEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred -----ceEEeeccccccceeeeeecccCCcee-----------eeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 45555444331 222222221110 011123333322234567899999999865
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=8e-19 Score=172.38 Aligned_cols=132 Identities=12% Similarity=0.059 Sum_probs=112.1
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCC-----------------------------------CEEEE--EeCCCe
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTG-----------------------------------KYFAV--GSKDAL 75 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg-----------------------------------~~L~s--gs~dg~ 75 (432)
.+.+||..+++++..+. |...|.+++|++++ .++++ |+.||.
T Consensus 82 ~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 67789988998888886 56689999888753 23333 577889
Q ss_pred EEEEeCCCCe----------------eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCe-EEEEeCCCCcEEEEEe---cC
Q psy9319 76 VSLWDAAELT----------------CIRTFQRLDWPVRAISFSHDGALIASGSEDLT-IDIAHVESGKKVYDIC---IQ 135 (432)
Q Consensus 76 I~iwd~~~~~----------------~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~-V~vwd~~~~~~~~~~~---~~ 135 (432)
|++||+.++. ++..+.+|.+.|++++|+|+|.+|++|+.|++ |++||+.+++++..+. |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999998765 26788999999999999999999999999998 9999999999999987 88
Q ss_pred CceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 136 AATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 136 ~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
..|.+++|+|+|.+|++++.|++|++||+.
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 899999999999999999999996666653
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.81 E-value=1.1e-18 Score=171.83 Aligned_cols=210 Identities=18% Similarity=0.189 Sum_probs=151.4
Q ss_pred CcccccccCC-CCcceeeeeeecCCCceeEEEEeecCcceeeEEE-------------ccCCcCEEEEEEcC-CCCEEEE
Q psy9319 5 NFIPLLGLNP-RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNIL-------------KAHPVTCICIEFDP-TGKYFAV 69 (432)
Q Consensus 5 n~I~~l~~~p-~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l-------------~~h~~~V~~l~~sp-dg~~L~s 69 (432)
..|.+++|+| ++..+ ++++.|+.+..| +..++.....+ .+|...|.+++|+| ++.+|++
T Consensus 44 ~~v~~~~~s~~~~~~l-~~~~~dg~i~iw-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 44 GGINTLDIEPVEGRYM-LSGGSDGVIVLY-----DLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp SCEEEEEECTTTCCEE-EEEETTSCEEEE-----ECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred CcEEEEEEecCCCCEE-EEEcCCCeEEEE-----ECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 5689999999 77766 777878766544 44455444333 25999999999999 7889999
Q ss_pred EeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeC---CCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEcc
Q psy9319 70 GSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHD---GALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHP 145 (432)
Q Consensus 70 gs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spd---g~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fsp 145 (432)
++.|+.|++||+.++.....+. +...+.++.|+|. +.++++|+.|+.|.+||+.++..+..+. |...|.+++|+|
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 9999999999999998887776 7889999999994 4599999999999999999999888886 888999999999
Q ss_pred CCc-EEEEEECCCeEEEEeCCceEEeecCCCc-eeeeecCCCch---hhhHH-hhhcccccccccCccccccccceeccC
Q psy9319 146 KQY-LLAYACDDKYDRKQDCGNLKVFGFLPEP-IKKRKRGGTMS---SWVKA-AKVNQKTHRERHQPEDRRKLGLLEKKK 219 (432)
Q Consensus 146 dg~-~l~s~s~d~~I~vwd~~~i~vwd~~~~~-~~~~~~g~~ms---s~~~a-~~~~~~~h~er~qp~~r~~~glLe~~~ 219 (432)
++. ++++++.|+.|++||++ ++. .+..+..+... ..... .............|.+.. ++.+..
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~ 265 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVR--------RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH---LLTVGT 265 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETT--------CSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE---EEEEET
T ss_pred CCCcEEEEEcCCCcEEEEECC--------CCCcccccccccccccceeeccccccccCceeEEEEcCCCCE---EEEecC
Confidence 998 58999999996666553 322 12221111000 00000 000001111122344444 788889
Q ss_pred cceeecccchhHH
Q psy9319 220 DYRVRADHFNKKK 232 (432)
Q Consensus 220 D~~lR~~d~~~k~ 232 (432)
|..+++||....+
T Consensus 266 dg~i~vwd~~~~~ 278 (408)
T 4a11_B 266 DNRMRLWNSSNGE 278 (408)
T ss_dssp TSCEEEEETTTCC
T ss_pred CCeEEEEECCCCc
Confidence 9999999987643
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.81 E-value=8.5e-20 Score=176.16 Aligned_cols=195 Identities=14% Similarity=0.097 Sum_probs=148.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce---eeEEEccCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE---EQNILKAHPVTCICIEFDPTGK-YFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~---~~~~l~~h~~~V~~l~~spdg~-~L~sgs~dg~I~iwd 80 (432)
+.|.+++|+|++..+ ++++.|+.+..|++. ++. ....+.+|...|++++|+|++. +|++|+.||.|++||
T Consensus 12 ~~v~~~~~s~~~~~l-~~~~~d~~v~iw~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 12 DYISDIKIIPSKSLL-LITSWDGSLTVYKFD-----IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SCEEEEEEEGGGTEE-EEEETTSEEEEEEEE-----TTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CcEEEEEEcCCCCEE-EEEcCCCeEEEEEeC-----CCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 568999999998876 777777766555543 444 3556669999999999999999 999999999999999
Q ss_pred C-CCCeeEEEEee--CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC---------CcEEEEEecCCceEEEEEccCCc
Q psy9319 81 A-AELTCIRTFQR--LDWPVRAISFSHDGALIASGSEDLTIDIAHVES---------GKKVYDICIQAATFTVAWHPKQY 148 (432)
Q Consensus 81 ~-~~~~~~~~~~~--h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~---------~~~~~~~~~~~~V~~l~fspdg~ 148 (432)
+ .++.. ..+.+ |...|.+++|+| +.+|++++.|+.|++||+.+ ++++..+.+...|.+++|+|++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 9 77654 77788 999999999999 99999999999999999987 7766666788899999999987
Q ss_pred EEEEEECCCeEEEEeCCceEEeecCC-Cce--eeeecCCCchhhhHHhhhcccccccccCc-cccccccceeccCcceee
Q psy9319 149 LLAYACDDKYDRKQDCGNLKVFGFLP-EPI--KKRKRGGTMSSWVKAAKVNQKTHRERHQP-EDRRKLGLLEKKKDYRVR 224 (432)
Q Consensus 149 ~l~s~s~d~~I~vwd~~~i~vwd~~~-~~~--~~~~~g~~mss~~~a~~~~~~~h~er~qp-~~r~~~glLe~~~D~~lR 224 (432)
+++++.|+.|++|| +.+ +.. ......+... .......| .+.. ++.+..|..++
T Consensus 163 -l~~~~~d~~i~i~d--------~~~~~~~~~~~~~~~~~~~-----------i~~i~~~~~~~~~---l~~~~~dg~i~ 219 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFR--------LPLCEDDNGTIEESGLKYQ-----------IRDVALLPKEQEG---YACSSIDGRVA 219 (342)
T ss_dssp -EEEEESTTEEEEEE--------SSCCTTCCCEEEECSCSSC-----------EEEEEECSGGGCE---EEEEETTSEEE
T ss_pred -EEEEeCCCeEEEEE--------CCccccccceeeecCCCCc-----------eeEEEECCCCCCE---EEEEecCCcEE
Confidence 89999999955554 444 221 1111111110 00111223 3333 77788899999
Q ss_pred cccchhH
Q psy9319 225 ADHFNKK 231 (432)
Q Consensus 225 ~~d~~~k 231 (432)
+|++...
T Consensus 220 i~~~~~~ 226 (342)
T 1yfq_A 220 VEFFDDQ 226 (342)
T ss_dssp EEECCTT
T ss_pred EEEEcCC
Confidence 9998764
No 115
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.81 E-value=8.4e-19 Score=189.45 Aligned_cols=174 Identities=21% Similarity=0.225 Sum_probs=148.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.++.|+|++..+ ++++.|+ .+.+|+..+++.+..+.+|.+.|++++|+|+|.+|++|+.||.|++||+.++
T Consensus 56 ~~v~~~~~s~~~~~l-~~~~~dg-----~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 56 TPVRAGKFIARKNWI-IVGSDDF-----RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp SCEEEEEEEGGGTEE-EEEETTS-----EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CcEEEEEEeCCCCEE-EEEeCCC-----eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 568899999999877 6665554 5678888899999999999999999999999999999999999999999876
Q ss_pred -eeEEEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEcc--CCcEEEEEECCCe
Q psy9319 85 -TCIRTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWHP--KQYLLAYACDDKY 158 (432)
Q Consensus 85 -~~~~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fsp--dg~~l~s~s~d~~ 158 (432)
.....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+. +...+.+++|+| ++.+|++++.|+.
T Consensus 130 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 209 (814)
T 3mkq_A 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT 209 (814)
T ss_dssp SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE
T ss_pred ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE
Confidence 67788889999999999999 89999999999999999998877766664 347788889988 8888999999999
Q ss_pred EEEEeCC----------------------------------ceEEeecCCCceeeeecCC
Q psy9319 159 DRKQDCG----------------------------------NLKVFGFLPEPIKKRKRGG 184 (432)
Q Consensus 159 I~vwd~~----------------------------------~i~vwd~~~~~~~~~~~g~ 184 (432)
|++||+. .|++||+.++..+..+..+
T Consensus 210 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 210 IKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 8888852 3778888877776665544
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.81 E-value=1.9e-18 Score=174.08 Aligned_cols=191 Identities=18% Similarity=0.138 Sum_probs=152.9
Q ss_pred cCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe
Q psy9319 12 LNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ 91 (432)
Q Consensus 12 ~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~ 91 (432)
+++++..+ ++++.|+.+ .+||..+++.+..+.+|.+.|.+++|+ +.+|++|+.||+|++||+.++.++..+.
T Consensus 125 ~~~~g~~l-~sg~~dg~i-----~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 125 LQFCGNRI-VSGSDDNTL-----KVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp EEEETTEE-EEEETTSCE-----EEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEcCCEE-EEEECCCcE-----EEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC
Confidence 44456555 777777654 667777899999999999999999998 5699999999999999999999999999
Q ss_pred eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCC-----
Q psy9319 92 RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCG----- 165 (432)
Q Consensus 92 ~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~----- 165 (432)
+|...|.+++|+ +..+++|+.||+|++||+.+++++..+. |...|.+++| ++.++++|+.|+.|++||+.
T Consensus 197 ~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 197 GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEe
Confidence 999999999995 5689999999999999999999988886 8889999998 68899999999998888853
Q ss_pred ---------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceecc
Q psy9319 166 ---------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK 218 (432)
Q Consensus 166 ---------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~ 218 (432)
.+++||+.++..+..+.+|...... ..+.+. -++.+.
T Consensus 273 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-------------~~~~~~---~l~~~~ 336 (445)
T 2ovr_B 273 HTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-------------MELKDN---ILVSGN 336 (445)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE-------------EEEETT---EEEEEE
T ss_pred EEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE-------------EEEeCC---EEEEEe
Confidence 2566666666666655554321100 001122 267888
Q ss_pred Ccceeecccchh
Q psy9319 219 KDYRVRADHFNK 230 (432)
Q Consensus 219 ~D~~lR~~d~~~ 230 (432)
.|..+++||...
T Consensus 337 ~dg~i~vwd~~~ 348 (445)
T 2ovr_B 337 ADSTVKIWDIKT 348 (445)
T ss_dssp TTSCEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 999999999864
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.80 E-value=3e-18 Score=172.74 Aligned_cols=200 Identities=16% Similarity=0.176 Sum_probs=158.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|.++.+++ . ++++++.|+++ .+||..+++.+..+.+|...|.+++|+ +..|++|+.||.|++||+.++
T Consensus 160 ~~v~~~~~~~--~-~l~s~~~dg~i-----~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 160 GGVWSSQMRD--N-IIISGSTDRTL-----KVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp SCEEEEEEET--T-EEEEEETTSCE-----EEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC
T ss_pred CCEEEEEecC--C-EEEEEeCCCeE-----EEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC
Confidence 3456677763 3 44777777754 666777899999999999999999996 568999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
.++..+.+|...|.+++| ++.++++|+.||.|++||+.++.++..+. |...|.+++| ++.++++++.|+.|++||
T Consensus 230 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d 305 (445)
T 2ovr_B 230 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 305 (445)
T ss_dssp CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEE
Confidence 999999999999999998 78899999999999999999999988886 8888999999 789999999999999999
Q ss_pred CC--------------------------------ceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCcccccc
Q psy9319 164 CG--------------------------------NLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRK 211 (432)
Q Consensus 164 ~~--------------------------------~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~ 211 (432)
+. .|++||+.++..+..+.++...... + .... ..+.
T Consensus 306 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--v------~~~~--~~~~-- 373 (445)
T 2ovr_B 306 VETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA--V------TCLQ--FNKN-- 373 (445)
T ss_dssp TTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC--E------EEEE--ECSS--
T ss_pred CCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCC--E------EEEE--ECCC--
Confidence 73 3677777777766666542100000 0 0000 0112
Q ss_pred ccceeccCcceeecccchhH
Q psy9319 212 LGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 212 ~glLe~~~D~~lR~~d~~~k 231 (432)
-++.+..|..+++||....
T Consensus 374 -~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 374 -FVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp -EEEEEETTSEEEEEETTTC
T ss_pred -EEEEEeCCCeEEEEECCCC
Confidence 2788899999999998754
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.79 E-value=5.5e-18 Score=170.53 Aligned_cols=192 Identities=15% Similarity=0.209 Sum_probs=145.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee---EEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ---NILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~---~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
..|.++.|+++ ++++++.|+.+. +||..++... ..+.+|...|.+++| ++.+|++|+.||.|++||+
T Consensus 214 ~~v~~l~~~~~---~l~s~s~dg~i~-----vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 214 EAVLHLRFNNG---MMVTCSKDRSIA-----VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp SCEEEEECCTT---EEEEEETTSCEE-----EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred CcEEEEEEcCC---EEEEeeCCCcEE-----EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 44677777643 457888887664 4555555544 678899999999999 6889999999999999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEE
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDR 160 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~ 160 (432)
.++.++..+.+|...|.++.| ++.++++|+.||.|++||+.++.++..+. |...|.+++| ++.+|++|+.||.
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-- 357 (435)
T 1p22_A 284 STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-- 357 (435)
T ss_dssp TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC--
T ss_pred CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc--
Confidence 999999999999999999988 46899999999999999999999998887 8889999999 6889999999999
Q ss_pred EEeCCceEEeecCCCc---------eeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchhH
Q psy9319 161 KQDCGNLKVFGFLPEP---------IKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNKK 231 (432)
Q Consensus 161 vwd~~~i~vwd~~~~~---------~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~k 231 (432)
|++||+.++. ++..+.+|....... . ..+.. ++.+..|..+++||+...
T Consensus 358 ------i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-----------~--~~~~~---l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 358 ------IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL-----------Q--FDEFQ---IVSSSHDDTILIWDFLND 415 (435)
T ss_dssp ------EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE-----------E--ECSSC---EEECCSSSEEEEEC----
T ss_pred ------EEEEECCCCCCccccccchheeeccCCCCCeEEE-----------E--eCCCE---EEEEeCCCEEEEEECCCC
Confidence 4555544333 555565554321110 0 12222 789999999999999875
Q ss_pred HHH
Q psy9319 232 KKT 234 (432)
Q Consensus 232 ~~~ 234 (432)
...
T Consensus 416 ~~~ 418 (435)
T 1p22_A 416 PAA 418 (435)
T ss_dssp ---
T ss_pred CCc
Confidence 443
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.78 E-value=1.1e-18 Score=168.31 Aligned_cols=203 Identities=9% Similarity=-0.028 Sum_probs=150.1
Q ss_pred CcccccccCCCCc-ceeeeeeecCCCceeEEEEeec-CcceeeEEEcc--CCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy9319 5 NFIPLLGLNPRPS-LYQSSVLTDISPKQLDFKFKEH-HKLEEQNILKA--HPVTCICIEFDPTGKYFAVGSKDALVSLWD 80 (432)
Q Consensus 5 n~I~~l~~~p~~~-~l~~s~s~D~~~~~~~i~~~d~-~~~~~~~~l~~--h~~~V~~l~~spdg~~L~sgs~dg~I~iwd 80 (432)
..|.+++|+|++. .+ ++++.|+. +.+|+. .++. ...+.+ |...|.+++|+| +.+|++++.|+.|++||
T Consensus 57 ~~v~~~~~~~~~~~~l-~~~~~dg~-----i~~wd~~~~~~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQI-YVGTVQGE-----ILKVDLIGSPS-FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVID 128 (342)
T ss_dssp SCEEEEEEEESSSEEE-EEEETTSC-----EEEECSSSSSS-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEEC
T ss_pred CceEEEEECCCCCcEE-EEEcCCCe-----EEEEEeccCCc-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEc
Confidence 4678999999988 65 67777765 566666 5554 477888 999999999999 99999999999999999
Q ss_pred CCC---------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC-CcEE---EEEecCCceEEEEEcc-C
Q psy9319 81 AAE---------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVES-GKKV---YDICIQAATFTVAWHP-K 146 (432)
Q Consensus 81 ~~~---------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~-~~~~---~~~~~~~~V~~l~fsp-d 146 (432)
+.+ +.++..+. |...|.+++|+|++ +++++.|+.|++||+.+ +... ....+...|.+++|+| +
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred ccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 987 66666666 88999999999987 99999999999999998 5532 2224788899999999 9
Q ss_pred CcEEEEEECCCeEEEEeCCceEEeecCCC------ceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCc
Q psy9319 147 QYLLAYACDDKYDRKQDCGNLKVFGFLPE------PIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKD 220 (432)
Q Consensus 147 g~~l~s~s~d~~I~vwd~~~i~vwd~~~~------~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D 220 (432)
+.++++++.|+. +.+|++..+ .....+.+|....-. .............|.+.. ++.+..|
T Consensus 206 ~~~l~~~~~dg~--------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~---l~~~~~d 272 (342)
T 1yfq_A 206 QEGYACSSIDGR--------VAVEFFDDQGDDYNSSKRFAFRCHRLNLKD--TNLAYPVNSIEFSPRHKF---LYTAGSD 272 (342)
T ss_dssp GCEEEEEETTSE--------EEEEECCTTCCSTTCTTCEEEECCCCCTTC--CSSCCCEEEEEECTTTCC---EEEEETT
T ss_pred CCEEEEEecCCc--------EEEEEEcCCCcccccccceeeecccccccc--cccceeEEEEEEcCCCCE---EEEecCC
Confidence 999999999999 555555544 455555555320000 000001111122344444 7888899
Q ss_pred ceeecccchhH
Q psy9319 221 YRVRADHFNKK 231 (432)
Q Consensus 221 ~~lR~~d~~~k 231 (432)
..+++||....
T Consensus 273 g~i~vwd~~~~ 283 (342)
T 1yfq_A 273 GIISCWNLQTR 283 (342)
T ss_dssp SCEEEEETTTT
T ss_pred ceEEEEcCccH
Confidence 99999998653
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=5.4e-18 Score=166.43 Aligned_cols=120 Identities=15% Similarity=0.220 Sum_probs=102.5
Q ss_pred eEEEccCCcCEEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCeeEEEEe-e-CCCCEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy9319 45 QNILKAHPVTCICIEFDPTGKYFAVGSKDAL-VSLWDAAELTCIRTFQ-R-LDWPVRAISFSHDGALIASGSEDLTIDIA 121 (432)
Q Consensus 45 ~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~-I~iwd~~~~~~~~~~~-~-h~~~V~~i~~spdg~~l~sgs~dg~V~vw 121 (432)
+..+.+|.++|++++|+|+|.+|++|+.|++ |+|||+.++.++..+. + |...|++++|+|+|.+|++++.|++|++|
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 7889999999999999999999999999998 9999999999999998 5 99999999999999999999999999999
Q ss_pred eCCCCcEE--EE--------------------Ee--cCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 122 HVESGKKV--YD--------------------IC--IQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 122 d~~~~~~~--~~--------------------~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
|+..+... .. +. .......++|+|+|..|++++.||.+++|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 268 EIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp ESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 99765311 00 11 1122367999999999999999999555543
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=5.9e-17 Score=159.66 Aligned_cols=199 Identities=11% Similarity=0.066 Sum_probs=150.7
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEE-EEeCCCeEEEEeC
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFA-VGSKDALVSLWDA 81 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~-sgs~dg~I~iwd~ 81 (432)
+...+.+++|+|++..++++++.|+ .+.+||..+++.+..+..+. .+.+++|+|+|++|+ +++.++.|++||+
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~-----~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSN-----DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGT-----EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cCCCcceEEECCCCCEEEEECCCCC-----eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 3445789999999998767776665 56778888999988888765 899999999999875 4556799999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEE-EEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEE-EEEECCCeE
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALI-ASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLL-AYACDDKYD 159 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l-~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l-~s~s~d~~I 159 (432)
.++..+..+.. ...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.....+.+++|+|+|..+ ++++.++.
T Consensus 104 ~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~- 181 (391)
T 1l0q_A 104 TSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMS- 181 (391)
T ss_dssp TTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTE-
T ss_pred CCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCE-
Confidence 99998877774 4578999999999977 67778999999999999999888877788999999999887 56677888
Q ss_pred EEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceecc---CcceeecccchhH
Q psy9319 160 RKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK---KDYRVRADHFNKK 231 (432)
Q Consensus 160 ~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~---~D~~lR~~d~~~k 231 (432)
+.+||+.++..+..+..+.. .......|.+.. ++... .+..+++||....
T Consensus 182 -------v~~~d~~~~~~~~~~~~~~~------------~~~~~~~~~g~~---l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 182 -------ISVIDTVTNSVIDTVKVEAA------------PSGIAVNPEGTK---AYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp -------EEEEETTTTEEEEEEECSSE------------EEEEEECTTSSE---EEEEEECSSCCEEEEEETTTT
T ss_pred -------EEEEECCCCeEEEEEecCCC------------ccceEECCCCCE---EEEEecCcCCCcEEEEECCCC
Confidence 66666666665555433211 001112234333 33333 6889999987653
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.76 E-value=6.3e-17 Score=159.45 Aligned_cols=196 Identities=12% Similarity=0.119 Sum_probs=154.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYF-AVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L-~sgs~dg~I~iwd~~~ 83 (432)
..+.+++|+|++..++++++.|+ .+.+||..+++.+..+..| ..+.+++|+|+|+.| ++++.++.|++||+.+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~-----~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASS-----TLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTT-----EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEECCCC-----EEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 46788999999998767765554 5678888899888888765 467999999999977 6888899999999999
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEE-EEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE---CCCeE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALI-ASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC---DDKYD 159 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l-~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s---~d~~I 159 (432)
+..+..+..+ ..+.+++|+|++.++ ++++.++.|++||+.++..+..+.+...+.+++|+|+|.+|++++ .++.
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~- 225 (391)
T 1l0q_A 148 KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT- 225 (391)
T ss_dssp TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-
T ss_pred CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-
Confidence 9988888755 567999999999887 567789999999999999988888888899999999999999887 6788
Q ss_pred EEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccc-eeccCcceeecccchh
Q psy9319 160 RKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGL-LEKKKDYRVRADHFNK 230 (432)
Q Consensus 160 ~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~gl-Le~~~D~~lR~~d~~~ 230 (432)
+.+||+.++..+..+..+... ......|.+.. + +....|..+++||...
T Consensus 226 -------v~~~d~~~~~~~~~~~~~~~~------------~~~~~s~dg~~---l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 226 -------VSMIDTGTNKITARIPVGPDP------------AGIAVTPDGKK---VYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp -------EEEEETTTTEEEEEEECCSSE------------EEEEECTTSSE---EEEEETTTTEEEEEETTT
T ss_pred -------EEEEECCCCeEEEEEecCCCc------------cEEEEccCCCE---EEEEcCCCCEEEEEECCC
Confidence 667777777666666554311 01112244333 3 5667899999998865
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.76 E-value=4.5e-18 Score=169.38 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=116.2
Q ss_pred CcccccccCC--------CCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCC-CEEEEEeCCCe
Q psy9319 5 NFIPLLGLNP--------RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTG-KYFAVGSKDAL 75 (432)
Q Consensus 5 n~I~~l~~~p--------~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg-~~L~sgs~dg~ 75 (432)
+.|.+++|+| ++. ++++++.|+++++|++. ++.++..+.+|..+|.+++|+|++ .+|++|+.|++
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~-----~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLT-----DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEE-----TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECC-----CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 5688999987 444 55999999887666654 677888888999999999999987 58999999999
Q ss_pred EEEEeCCCCeeEEE-------------------------EeeCCCCEEEEEEe-eCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy9319 76 VSLWDAAELTCIRT-------------------------FQRLDWPVRAISFS-HDGALIASGSEDLTIDIAHVESGKKV 129 (432)
Q Consensus 76 I~iwd~~~~~~~~~-------------------------~~~h~~~V~~i~~s-pdg~~l~sgs~dg~V~vwd~~~~~~~ 129 (432)
|++||+.++..... ..+|...|.++.|+ |++..|++++.|+++++||+.++...
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 99999987654322 23577788999998 69999999999999999999877655
Q ss_pred EEEe-cCCceE------------------EEEEcc--CCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeecCCC
Q psy9319 130 YDIC-IQAATF------------------TVAWHP--KQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 130 ~~~~-~~~~V~------------------~l~fsp--dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ 185 (432)
..+. +...+. .+.|+| ++.++++|+.|+. |++||+.++..+..+.+|.
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~--------V~lwd~~~~~~~~~~~~~~ 359 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGL--------IQLINTYEKDSNSIPIQLG 359 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTE--------EEEEETTCTTCCEEEEECS
T ss_pred ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCE--------EEEEECCCCcEEEEecCCC
Confidence 4442 222222 233444 3456778888999 7777777777666555543
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.74 E-value=5.1e-17 Score=154.76 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=124.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce----eeEEEccCCcCEEEEEEcCCCCEE---EEEeCCCeEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE----EQNILKAHPVTCICIEFDPTGKYF---AVGSKDALVS 77 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~----~~~~l~~h~~~V~~l~~spdg~~L---~sgs~dg~I~ 77 (432)
..+..+.+++++..+ ++++.|+.+..| |..+++ .......|.+.|.+++++|++..+ ++++.++.|+
T Consensus 151 ~~~~~~~~~~~~~~l-~s~~~d~~i~iw-----d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHL-ASGGNDNLVNVW-----PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp SCEEEEEECTTSSEE-EEEETTSCEEEE-----ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred CceEEEEEcCCCCEE-EEEecCcceeEE-----ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 446777888988876 788888876555 444443 355667888999999999966433 4667889999
Q ss_pred EEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe--CCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEE
Q psy9319 78 LWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS--EDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 78 iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs--~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s 154 (432)
+||.......... .+...+..+.|+|++..+++++ .|+.|++||+.+++++..+. |.+.|.+++|+|+|.+|++|+
T Consensus 225 lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 225 IWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp EEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9999987766554 4778899999999999888765 68999999999999999987 899999999999999999999
Q ss_pred CCCeEEEEeC
Q psy9319 155 DDKYDRKQDC 164 (432)
Q Consensus 155 ~d~~I~vwd~ 164 (432)
.|++|++||+
T Consensus 304 ~D~~v~iWd~ 313 (318)
T 4ggc_A 304 ADETLRLWRC 313 (318)
T ss_dssp TTTEEEEECC
T ss_pred cCCeEEEEEC
Confidence 9999655554
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.74 E-value=6.3e-17 Score=161.64 Aligned_cols=198 Identities=7% Similarity=-0.033 Sum_probs=150.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeE-----EEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQN-----ILKAHPVTCICIEFDPTGKYFAVGSKDALVSLW 79 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~-----~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iw 79 (432)
..+.+++|+|++ .++++++.|+. +.+||..+++... .+.+|.+.|.+++|+|++.++++++.|+.|++|
T Consensus 123 ~~~~~~~~s~~~-~~~~~~~~~~~-----i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 123 FQPKSVRFIDNT-RLAIPLLEDEG-----MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp SCBCCCEESSSS-EEEEEBTTSSS-----EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred CCceEEEEeCCC-eEEEEeCCCCe-----EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 445688999944 45466655543 6777888888776 455889999999999999999999999999999
Q ss_pred eCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE-eCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE----
Q psy9319 80 DAAELTCIRTFQRLDWPVRAISFSHDGALIASG-SEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC---- 154 (432)
Q Consensus 80 d~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s---- 154 (432)
|+.++..+..+..|...+.+++|+|++..++++ +.|+.|++||+.++..+..+.....+.+++|+|+|.++++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESC
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCC
Confidence 999999999998899999999999999988554 479999999999999988887777799999999999999888
Q ss_pred ----CCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccchh
Q psy9319 155 ----DDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHFNK 230 (432)
Q Consensus 155 ----~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~~~ 230 (432)
.|+. |.+||+.++..+..+.... ........|.+.. -++....|..+++||...
T Consensus 277 ~~~~~dg~--------i~~~d~~~~~~~~~~~~~~------------~~~~~~~~~~g~~--l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 277 NQESGGGR--------LGIYSMDKEKLIDTIGPPG------------NKRHIVSGNTENK--IYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp TTCSCCEE--------EEEEETTTTEEEEEEEEEE------------CEEEEEECSSTTE--EEEEETTTTEEEEEETTT
T ss_pred ccccCCCe--------EEEEECCCCcEEeeccCCC------------CcceEEECCCCCE--EEEEecCCCEEEEEECCC
Confidence 4777 5566666655544331100 0000111233322 135557788999998864
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=2.2e-17 Score=167.06 Aligned_cols=147 Identities=16% Similarity=0.109 Sum_probs=118.0
Q ss_pred CcccccccCCCCcceee---eeeecCCCceeEEEEeecCcc--------e---eeEEEccCCcCEEEEEEcCC-CCEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQS---SVLTDISPKQLDFKFKEHHKL--------E---EQNILKAHPVTCICIEFDPT-GKYFAV 69 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~---s~s~D~~~~~~~i~~~d~~~~--------~---~~~~l~~h~~~V~~l~~spd-g~~L~s 69 (432)
..|.+++|+|++..+++ +++.|++ +++||..++ + ....+.+|...|.+++|+|+ +.+|++
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~-----v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSI-----IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEE-----EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCce-----EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 45889999999998854 5655654 455554443 1 24566789999999999997 899999
Q ss_pred EeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-c-------CCceEEE
Q psy9319 70 GSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-I-------QAATFTV 141 (432)
Q Consensus 70 gs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~-------~~~V~~l 141 (432)
++.||+|++||+.++..+....+|...|++++|+|+|.+|++|+.||.|++||++ +.....+. + ...|.++
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred EECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 9999999999999987777777889999999999999999999999999999998 66655553 2 1278999
Q ss_pred EEccCCcEEEEE-ECCC
Q psy9319 142 AWHPKQYLLAYA-CDDK 157 (432)
Q Consensus 142 ~fspdg~~l~s~-s~d~ 157 (432)
+|++++.++++. +.+|
T Consensus 247 ~w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADG 263 (434)
T ss_dssp EEEETTEEEEEEEETTC
T ss_pred EEecCceEEEEEccCCC
Confidence 999998877654 3443
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.72 E-value=7.1e-16 Score=153.99 Aligned_cols=195 Identities=15% Similarity=0.103 Sum_probs=150.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe--------CCCeE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS--------KDALV 76 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs--------~dg~I 76 (432)
..+.+++|+|++..++++++.|+ .+.+||..+++.+..+..+ ..+.+++|+|+|..|++++ .|+.|
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 45688999999988867765554 5678888888888888765 4589999999999999888 58899
Q ss_pred EEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEE-EEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEEC
Q psy9319 77 SLWDAAELTCIRTFQRLDWPVRAISFSHDGALI-ASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 77 ~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l-~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~ 155 (432)
++||+.++..+..+ .|...+.+++|+|++..+ ++++.|+.|.+||+.+++.+..+.+...+.+++|+|+|.++++++.
T Consensus 286 ~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 286 GIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEC
T ss_pred EEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEec
Confidence 99999998877665 466689999999999755 5668899999999999999988888888999999999999988876
Q ss_pred ---------------CCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceec-cC
Q psy9319 156 ---------------DKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEK-KK 219 (432)
Q Consensus 156 ---------------d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~-~~ 219 (432)
||. +.+||+.++..+..+.++.. .......|.+.. ++.. ..
T Consensus 365 ~~~~~~~~~~~~g~~dg~--------v~~~d~~~~~~~~~~~~~~~------------~~~~~~s~dg~~---l~~~~~~ 421 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGK--------VYVIDTTTDTVKEFWEAGNQ------------PTGLDVSPDNRY---LVISDFL 421 (433)
T ss_dssp CCCCTTTCTTSCCSSCCE--------EEEEETTTTEEEEEEECSSS------------EEEEEECTTSCE---EEEEETT
T ss_pred CCCccccccccccccceE--------EEEEECCCCcEEEEecCCCC------------CceEEEcCCCCE---EEEEECC
Confidence 357 77777777777666654321 011122344443 4444 45
Q ss_pred cceeecccch
Q psy9319 220 DYRVRADHFN 229 (432)
Q Consensus 220 D~~lR~~d~~ 229 (432)
|..+++|+..
T Consensus 422 d~~i~v~~~~ 431 (433)
T 3bws_A 422 DHQIRVYRRD 431 (433)
T ss_dssp TTEEEEEEET
T ss_pred CCeEEEEEec
Confidence 9999999875
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.70 E-value=4.9e-17 Score=164.47 Aligned_cols=152 Identities=13% Similarity=0.086 Sum_probs=115.9
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcc----------------eeeEEEccCCcCEEEEEEcCCCCEEE-
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKL----------------EEQNILKAHPVTCICIEFDPTGKYFA- 68 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~----------------~~~~~l~~h~~~V~~l~~spdg~~L~- 68 (432)
.++.++++|.+.+++ +++.|+ +.+|+.... ..... -.|.+.|.+++|+|+|.+|+
T Consensus 38 ~~n~lavs~~~~~l~-~~~~dg------v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav 109 (434)
T 2oit_A 38 RSSLLAVSNKYGLVF-AGGASG------LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSA 109 (434)
T ss_dssp CCBCEEEETTTTEEE-EEETTE------EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEE
T ss_pred CccEEEEecCCCEEE-EECCCE------EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEE
Confidence 468888999888774 444443 333322110 01111 23567899999999999999
Q ss_pred ---EEeCCCeEEEEeCCCC--------ee---EEEEeeCCCCEEEEEEeeC-CCEEEEEeCCCeEEEEeCCCCcEEEEE-
Q psy9319 69 ---VGSKDALVSLWDAAEL--------TC---IRTFQRLDWPVRAISFSHD-GALIASGSEDLTIDIAHVESGKKVYDI- 132 (432)
Q Consensus 69 ---sgs~dg~I~iwd~~~~--------~~---~~~~~~h~~~V~~i~~spd-g~~l~sgs~dg~V~vwd~~~~~~~~~~- 132 (432)
+|+.|+.|+|||+.++ .. +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+...
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc
Confidence 7888999999998654 22 4555679999999999997 889999999999999999998665444
Q ss_pred ecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 133 CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 133 ~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
.|...|.+++|+|+|.+|++|+.|+.|++||++
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 378889999999999999999999995555543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.69 E-value=1.7e-15 Score=151.94 Aligned_cols=160 Identities=11% Similarity=0.020 Sum_probs=126.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEE-EEeCCCe--EEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFA-VGSKDAL--VSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~-sgs~dg~--I~iwd~ 81 (432)
..+.+++|+|++..+ ++++.|. ....+.+||..+++.. .+..|.+.+.+++|+|||+.|+ +++.++. |++||+
T Consensus 179 ~~v~~~~~Spdg~~l-a~~s~~~--~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKL-AYVTFES--GRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp SCEEEEEECTTSSEE-EEEECTT--SSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CcceeeEEcCCCCEE-EEEEecC--CCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEEC
Confidence 457889999999977 5555553 2357889999888765 5778888999999999999887 6666654 999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC-CC--eEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECC--
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSE-DL--TIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDD-- 156 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~-dg--~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d-- 156 (432)
.++.. ..+..|...+.+++|+|||++|++++. ++ .|++||+.++.......+...+.+++|+|+|.+|++++.+
T Consensus 255 ~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 255 ASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp TTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCC
Confidence 98775 567778889999999999999998886 44 7888899888754433466778999999999999988764
Q ss_pred -CeEEEEeCCceEEeecCCCce
Q psy9319 157 -KYDRKQDCGNLKVFGFLPEPI 177 (432)
Q Consensus 157 -~~I~vwd~~~i~vwd~~~~~~ 177 (432)
.. |.+||+.++..
T Consensus 334 ~~~--------i~~~d~~~~~~ 347 (415)
T 2hqs_A 334 QQH--------IAKQDLATGGV 347 (415)
T ss_dssp CEE--------EEEEETTTCCE
T ss_pred ceE--------EEEEECCCCCE
Confidence 35 66777776655
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.66 E-value=1.1e-14 Score=146.01 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=112.7
Q ss_pred eEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCE
Q psy9319 32 LDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDA---LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGAL 108 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg---~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~ 108 (432)
..+.+||.. +.....+.+|...|.+++|||+|+.|++++.++ .|++||+.++.+. .+..|...+.+++|+|||+.
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSE
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCE
Confidence 688899986 566788889999999999999999999999885 9999999988765 56678889999999999998
Q ss_pred EE-EEeCCC--eEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEEC-CCeEEEEeCCceEEeecCCCce
Q psy9319 109 IA-SGSEDL--TIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACD-DKYDRKQDCGNLKVFGFLPEPI 177 (432)
Q Consensus 109 l~-sgs~dg--~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~-d~~I~vwd~~~i~vwd~~~~~~ 177 (432)
|+ +++.++ .|++||+.+++......+...+.+++|+|+|..|++++. ++. ..+.+||+.++..
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~------~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR------PQVYKVNINGGAP 303 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSS------CEEEEEETTSSCC
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCC------cEEEEEECCCCCE
Confidence 88 666555 499999999887544457788999999999999998886 443 1255566666553
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.61 E-value=1e-14 Score=156.24 Aligned_cols=150 Identities=14% Similarity=0.138 Sum_probs=118.1
Q ss_pred CcccccccCCCCcceeeeeee-cCCCceeEEEEeecCcceeeEEEccCCc------------------------CEEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLT-DISPKQLDFKFKEHHKLEEQNILKAHPV------------------------TCICIE 59 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~-D~~~~~~~i~~~d~~~~~~~~~l~~h~~------------------------~V~~l~ 59 (432)
..+..++|+|++..+ ++++. |+......+.+||..+++....+..+.. .|.+++
T Consensus 37 ~~~~~~~~SpdG~~l-a~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRV-TFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEE-EEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCceEecCCCEE-EEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346789999999987 44444 6544456888999999888777765543 378999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCe--eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCc
Q psy9319 60 FDPTGKYFAVGSKDALVSLWDAAELT--CIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAA 137 (432)
Q Consensus 60 ~spdg~~L~sgs~dg~I~iwd~~~~~--~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~ 137 (432)
|||||++|++++. +.|.+||+.++. ....+..|...+.+++|||||++|++++. +.|++||+.++...........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCcc
Confidence 9999999999886 899999999872 34556778889999999999999999884 5899999998876654432221
Q ss_pred -----------------eEEEEEccCCcEEEEEECCC
Q psy9319 138 -----------------TFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 138 -----------------V~~l~fspdg~~l~s~s~d~ 157 (432)
+.+++|||||++|++++.|+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 47799999999999987665
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.55 E-value=4.4e-13 Score=129.39 Aligned_cols=164 Identities=7% Similarity=-0.040 Sum_probs=130.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcC---------EEEEEEcCCCCEEEEEe--CCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVT---------CICIEFDPTGKYFAVGS--KDA 74 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~---------V~~l~~spdg~~L~sgs--~dg 74 (432)
.+..+.++|++..+++++..+. .+.+||..+++.+..+..+... +.+++|+|+|..+++++ .++
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 164 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNS-----AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKES 164 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTT-----EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSC
T ss_pred CcceEEECCCCCEEEEEecCCC-----EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCc
Confidence 3567889999986656654443 6778888899888888765432 78999999999877765 478
Q ss_pred eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec-----CCceEEEEEccCCcE
Q psy9319 75 LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI-----QAATFTVAWHPKQYL 149 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~-----~~~V~~l~fspdg~~ 149 (432)
.|.+||+.++..+..+..+...+.+++|+|+|.++++++.++.|.+||+.+++.+..+.. ...+..++|+|+|.+
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 999999999998888875666788999999999999999999999999999998877753 345778999999998
Q ss_pred EEEEECC-CeEEEEeCCceEEeecCCCceeeeec
Q psy9319 150 LAYACDD-KYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 150 l~s~s~d-~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
+++++.+ +. +.+||+.++..+..+.
T Consensus 245 l~~~~~~~~~--------v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 245 AFITDSKAAE--------VLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEEEESSSSE--------EEEEETTTCCEEEEEE
T ss_pred EEEEeCCCCE--------EEEEECCCCcEEEEEE
Confidence 7777654 67 6677777776666554
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=6.7e-13 Score=128.10 Aligned_cols=163 Identities=9% Similarity=0.033 Sum_probs=127.6
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~ 86 (432)
+..+.|+|++..+++++..+ ...+.+||..+++.+..+..+...+.+++|+|+|+.|++++.++.|.+||+.++..
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp EEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred CceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 56789999998775554221 23577888889999888886666688999999999999999999999999999988
Q ss_pred EEEEee----CCCCEEEEEEeeCCCEEEEEeC-CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE-CCCeEE
Q psy9319 87 IRTFQR----LDWPVRAISFSHDGALIASGSE-DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC-DDKYDR 160 (432)
Q Consensus 87 ~~~~~~----h~~~V~~i~~spdg~~l~sgs~-dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s-~d~~I~ 160 (432)
...+.. +...+.+++|+|+|.++++++. ++.|.+||+.+++.+..+....+ ..++|+|+|.++++++ .++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~-- 295 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGK-- 295 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTE--
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCe--
Confidence 877764 4556889999999998777664 59999999999999888874443 5699999999766665 6788
Q ss_pred EEeCCceEEeecCCCceeeeec
Q psy9319 161 KQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 161 vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
+.+||+.++..+..+.
T Consensus 296 ------v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 296 ------VSVIDAKSYKVVKTFD 311 (353)
T ss_dssp ------EEEEETTTTEEEEEEE
T ss_pred ------EEEEECCCCeEEEEEe
Confidence 5555555555554443
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=5.5e-14 Score=150.00 Aligned_cols=148 Identities=10% Similarity=0.051 Sum_probs=115.5
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc---CEEEEEEcCCCCEEEEEeCC---------C
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV---TCICIEFDPTGKYFAVGSKD---------A 74 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~---~V~~l~~spdg~~L~sgs~d---------g 74 (432)
+..++|+|++.++ ++ +.|+ .+.+||..+++....+.+|.. .|.+++|||||++|++++.+ +
T Consensus 19 ~~~~~~spdg~~~-~~-~~dg-----~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR-EQKG-----TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCBSSSSCBC-CC-CSSS-----CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccEEcCCCcEE-EE-eCCC-----CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 5788999999854 44 4444 678889889988888888765 48999999999999999875 7
Q ss_pred eEEEEeCCCCeeEEEEe---eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCce------------
Q psy9319 75 LVSLWDAAELTCIRTFQ---RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAAT------------ 138 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~---~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V------------ 138 (432)
.|.+||+.++.. ..+. +|...+.+++|||||+.|++++. +.|++||+.++....... +...+
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 888999998876 3343 34445889999999999999886 789999999988766554 23323
Q ss_pred ------EEEEEccCCcEEEEEECCC-eEEEEe
Q psy9319 139 ------FTVAWHPKQYLLAYACDDK-YDRKQD 163 (432)
Q Consensus 139 ------~~l~fspdg~~l~s~s~d~-~I~vwd 163 (432)
.+++|||||+.|++++.++ .+.+|+
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~ 201 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEE
Confidence 7899999999999887553 344554
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.52 E-value=6.1e-13 Score=127.24 Aligned_cols=164 Identities=8% Similarity=-0.029 Sum_probs=124.7
Q ss_pred cccccccCCCCcceeeeeeec----CCC--ceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTD----ISP--KQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLW 79 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D----~~~--~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iw 79 (432)
.+..+.|+|++..++++.... ... ....+.+||..+++.+..+.. ...+.+++|+|+|++|+++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 467789999998775553211 000 235778899888888877765 3457789999999988887 6889999
Q ss_pred eCCCCeeEEEEeeC------------------------------------------------------------------
Q psy9319 80 DAAELTCIRTFQRL------------------------------------------------------------------ 93 (432)
Q Consensus 80 d~~~~~~~~~~~~h------------------------------------------------------------------ 93 (432)
|+.++.....+..+
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 99877665444322
Q ss_pred CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecC
Q psy9319 94 DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFL 173 (432)
Q Consensus 94 ~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~ 173 (432)
...+.+++|+|+|++++++ ++.|.+||+.+++.+..+.....+.+++|+|+|++|++++.++. |.+||+.
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--------i~v~d~~ 309 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD--------LAAYDAE 309 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSE--------EEEEETT
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCc--------EEEEECc
Confidence 1234568999999999888 78999999999998888877777899999999999998888888 6677777
Q ss_pred CCceeeeec
Q psy9319 174 PEPIKKRKR 182 (432)
Q Consensus 174 ~~~~~~~~~ 182 (432)
++..+..+.
T Consensus 310 ~~~~~~~~~ 318 (337)
T 1pby_B 310 TLEKKGQVD 318 (337)
T ss_dssp TCCEEEEEE
T ss_pred CCcEEEEEE
Confidence 776666554
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=3.8e-13 Score=125.57 Aligned_cols=148 Identities=13% Similarity=0.084 Sum_probs=108.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCc-ceeeEEEccCC-cCEEEEEEcCCCCEEEEEeC--CC--eEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHK-LEEQNILKAHP-VTCICIEFDPTGKYFAVGSK--DA--LVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~-~~~~~~l~~h~-~~V~~l~~spdg~~L~sgs~--dg--~I~i 78 (432)
..|.++.|+|++..+++ ++ + ..+.+||..+ ++....+.+|. ..+.+++|+|+|++|++++. ++ .|.+
T Consensus 42 ~~v~~~~~spdg~~l~~-~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLL-NS-E-----GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp SCCEEEEECTTSSEEEE-EE-T-----TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred cceEeeEECCCCCEEEE-Ec-C-----CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 45788999999997744 32 3 2678888888 77776666663 67889999999999999983 33 4555
Q ss_pred EeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEE-EEeCCCeEEEEeC--CCCcEEEEEecCCceEEEEEccCCcEEEEEE-
Q psy9319 79 WDAAELTCIRTFQRLDWPVRAISFSHDGALIA-SGSEDLTIDIAHV--ESGKKVYDICIQAATFTVAWHPKQYLLAYAC- 154 (432)
Q Consensus 79 wd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~-sgs~dg~V~vwd~--~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s- 154 (432)
|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+|++ .++.......+...+.+++|+|+|.+|++++
T Consensus 115 ~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 115 LPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp EETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred EECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec
Confidence 5555554 3444433 4589999999999887 6778998888885 4455444344777899999999999888776
Q ss_pred CCCeEEE
Q psy9319 155 DDKYDRK 161 (432)
Q Consensus 155 ~d~~I~v 161 (432)
.++.+.+
T Consensus 193 ~~~~~~i 199 (297)
T 2ojh_A 193 RTGQMQI 199 (297)
T ss_dssp TTSSCEE
T ss_pred CCCCccE
Confidence 4777333
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.50 E-value=1.9e-13 Score=141.95 Aligned_cols=167 Identities=9% Similarity=0.065 Sum_probs=132.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc----CCcCEEEEEEcCC-CCEEEEEe-CCCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA----HPVTCICIEFDPT-GKYFAVGS-KDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~----h~~~V~~l~~spd-g~~L~sgs-~dg~I~i 78 (432)
.++..+.|+|++..+++++..+. .+.+||..+++++..+.. |.+....+ ++|+ |..+++++ .|++|.+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~-----~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v 397 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSN-----KVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISL 397 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGT-----EEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEE
T ss_pred cCccCceECCCCCEEEEEecCCC-----eEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEE
Confidence 45667899999998767765554 457788889999888874 65544444 5776 66667765 5899999
Q ss_pred EeCCC-------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-------CCCeEEEEeCCCCcEE-EEE---------ec
Q psy9319 79 WDAAE-------LTCIRTFQRLDWPVRAISFSHDGALIASGS-------EDLTIDIAHVESGKKV-YDI---------CI 134 (432)
Q Consensus 79 wd~~~-------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-------~dg~V~vwd~~~~~~~-~~~---------~~ 134 (432)
||+.+ ++++.++.+|.+.+..++++|+|++|++++ .+++|.+||+.+++.. ..+ .+
T Consensus 398 ~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 398 IGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp EECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred EEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 99998 899999999998899999999999999987 2679999999999877 444 23
Q ss_pred CCceEEEEEccCCcEEEEEE-----CCCeEEEEeCCceEEeecCCCceeeeecCCC
Q psy9319 135 QAATFTVAWHPKQYLLAYAC-----DDKYDRKQDCGNLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 135 ~~~V~~l~fspdg~~l~s~s-----~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ 185 (432)
...+..+.|+|+|..++++. .++. |.+||..+++++..+.+..
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~--------i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSA--------LVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCE--------EEEEETTTTEEEEEECCTT
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCe--------EEEEECCCceEEEeecCCC
Confidence 56799999999999988774 3577 7888888888887776543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1.3e-13 Score=128.72 Aligned_cols=148 Identities=12% Similarity=0.125 Sum_probs=116.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEeCC-C
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS-KDALVSLWDAA-E 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs-~dg~I~iwd~~-~ 83 (432)
.+..+.|+|++..++.++..|+.+.+|.+. ..+ .....+..|...+.+++|+|+|..|++++ .++.+.||++. .
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~---~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMD---IDS-GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEE---TTT-CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEE---CCC-CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC
Confidence 367788999999887677777765555443 333 34566778888999999999999887766 58899999876 4
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC-----------CeEEEEeCCCCcEEEEE---ecCCceEEEEEccCCcE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSED-----------LTIDIAHVESGKKVYDI---CIQAATFTVAWHPKQYL 149 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d-----------g~V~vwd~~~~~~~~~~---~~~~~V~~l~fspdg~~ 149 (432)
+.....+..|...+.+++|+|+|.+|++++.+ +.|.+||+.+++..... .+...+.+++|+|+|..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 206 GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCE
Confidence 55677777788889999999999999988765 56999999988764333 36778999999999999
Q ss_pred EEEEECCC
Q psy9319 150 LAYACDDK 157 (432)
Q Consensus 150 l~s~s~d~ 157 (432)
|++++.+.
T Consensus 286 l~~~~~~~ 293 (297)
T 2ojh_A 286 FAYVRYFP 293 (297)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 98887664
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.50 E-value=8.2e-14 Score=148.43 Aligned_cols=157 Identities=14% Similarity=0.076 Sum_probs=116.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE-- 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~-- 83 (432)
.|.+++|+|+ ..+++++ | ..+.+||..+++.. .+..+...+.+++|||||+.|+++ .++.|++||+.+
T Consensus 83 ~v~~~~~spd-~~~~~~~--~-----~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT--Q-----GGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCEEEEETTT-TEEEEEE--T-----TEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT
T ss_pred CceeEEECCC-CeEEEEE--C-----CEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccc
Confidence 4788999999 5554442 2 57788888877654 445567778899999999999985 579999999998
Q ss_pred ---CeeEEEEeeCCCC--------------EEEEEEeeCCCEEEEEe---------------------------------
Q psy9319 84 ---LTCIRTFQRLDWP--------------VRAISFSHDGALIASGS--------------------------------- 113 (432)
Q Consensus 84 ---~~~~~~~~~h~~~--------------V~~i~~spdg~~l~sgs--------------------------------- 113 (432)
+........+... +.+++|||||++|++++
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 7765444433333 48899999999999987
Q ss_pred CCCeEEEEeCCCCcEEEEE---ecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCC
Q psy9319 114 EDLTIDIAHVESGKKVYDI---CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 114 ~dg~V~vwd~~~~~~~~~~---~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
.+..|++||+.++...... .+...+.+++|+|||+.|++++.++.- ....+.+||+.++
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g 294 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETG 294 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCC
Confidence 4468999999988765544 245668999999999999988766510 0011666776666
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=1e-13 Score=147.88 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=116.3
Q ss_pred ccccccCCCCcceeeeeeecCCCc----eeEEEEeecCcceeeEEEc---cCCcCEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPK----QLDFKFKEHHKLEEQNILK---AHPVTCICIEFDPTGKYFAVGSKDALVSLW 79 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~----~~~i~~~d~~~~~~~~~l~---~h~~~V~~l~~spdg~~L~sgs~dg~I~iw 79 (432)
|..++|+|++..+ ++++.+.... ...+.+||..+++. ..+. +|...+.+++|||||+.|++++. +.|++|
T Consensus 63 v~~~~~SpDg~~l-~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 63 AIRYEISPDREYA-LFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp CSEEEECTTSSEE-EEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred cceEEECCCCCEE-EEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 7889999999987 5555554443 36788999888865 3343 44455889999999999999886 799999
Q ss_pred eCCCCeeEEEEeeCCCCE------------------EEEEEeeCCCEEEEEeCCC-------------------------
Q psy9319 80 DAAELTCIRTFQRLDWPV------------------RAISFSHDGALIASGSEDL------------------------- 116 (432)
Q Consensus 80 d~~~~~~~~~~~~h~~~V------------------~~i~~spdg~~l~sgs~dg------------------------- 116 (432)
|+.++........+...+ .+++|||||+.|++++.|+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999888766555444333 7899999999999887543
Q ss_pred ---------eEEEEeCCCCcEEEEEe-c------CCceEEEEEccCCcEEEEEECC----CeEEEEeC
Q psy9319 117 ---------TIDIAHVESGKKVYDIC-I------QAATFTVAWHPKQYLLAYACDD----KYDRKQDC 164 (432)
Q Consensus 117 ---------~V~vwd~~~~~~~~~~~-~------~~~V~~l~fspdg~~l~s~s~d----~~I~vwd~ 164 (432)
.|++||+.++.+...+. + ...+.+++|+|||+++++.+.. ..|++||+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 79999999888655554 2 4568899999999988776533 34455554
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.48 E-value=8.9e-13 Score=126.08 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=92.7
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccC-----CcCEEEEEEcCCCCEEEEEe---------
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH-----PVTCICIEFDPTGKYFAVGS--------- 71 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h-----~~~V~~l~~spdg~~L~sgs--------- 71 (432)
.+..++|+|++..+++++..+ ..+.+||..+++.+..+... ...+.+++|+|+|++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 109 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH 109 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccc
Confidence 367889999998775665443 35778888888887766532 12567899999999988886
Q ss_pred ---CCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE
Q psy9319 72 ---KDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI 132 (432)
Q Consensus 72 ---~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~ 132 (432)
.++.|.+||+.++..+..+.. ...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+
T Consensus 110 ~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 110 FEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEE
T ss_pred ccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeee
Confidence 579999999999888777764 4567889999999988887 678999999887766544
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.48 E-value=2.1e-12 Score=123.85 Aligned_cols=149 Identities=10% Similarity=-0.037 Sum_probs=116.0
Q ss_pred ccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCee-EE
Q psy9319 11 GLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSK-DALVSLWDAAELTC-IR 88 (432)
Q Consensus 11 ~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~-dg~I~iwd~~~~~~-~~ 88 (432)
.|.+++..++++++.++ .+.+||..+++....+..+...+ +++|+|+|+++++++. ++.|.+||+.++.. ..
T Consensus 4 ~~~~~~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLR-----RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp ---CCCCEEEEEEGGGT-----EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEE
T ss_pred eEcCCCCEEEEEecCCC-----eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEE
Confidence 45666666667776655 56778888898888888777777 9999999997766665 88999999999887 77
Q ss_pred EEeeCCCCEEEEEEeeCCCEEEEEeCCC---eEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEE-ECCCe-EEEEe
Q psy9319 89 TFQRLDWPVRAISFSHDGALIASGSEDL---TIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYA-CDDKY-DRKQD 163 (432)
Q Consensus 89 ~~~~h~~~V~~i~~spdg~~l~sgs~dg---~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~-s~d~~-I~vwd 163 (432)
.+..+..+..+++|+|+|++++++..++ .|.+||+.+++.+..+.....+.+++|+|+|++++++ ..++. |.+|+
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 7777776666699999999999555553 8999999999998888877778999999999855555 55566 77766
Q ss_pred CC
Q psy9319 164 CG 165 (432)
Q Consensus 164 ~~ 165 (432)
+.
T Consensus 158 ~~ 159 (331)
T 3u4y_A 158 ID 159 (331)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.48 E-value=1.7e-12 Score=134.91 Aligned_cols=199 Identities=11% Similarity=0.067 Sum_probs=143.3
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeec--CcceeeEEEccCCcCEEEEEEcC----CCCEEEEEeC-CCeEEEE
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEH--HKLEEQNILKAHPVTCICIEFDP----TGKYFAVGSK-DALVSLW 79 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~--~~~~~~~~l~~h~~~V~~l~~sp----dg~~L~sgs~-dg~I~iw 79 (432)
+..+.|+|++..+++ ++.| ..+.+||. .+++.+..+..+ ..+..++||| ||++|++++. +++|.+|
T Consensus 181 ~~~v~~spdg~~l~v-~~~d-----~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 181 VHISRMSASGRYLLV-IGRD-----ARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp EEEEEECTTSCEEEE-EETT-----SEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred cceEEECCCCCEEEE-ECCC-----CeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence 678889999998744 4444 45778888 788888888754 5578999999 9999998884 8999999
Q ss_pred eCCCCeeEEEEeeC-----------CCCEEEEEEeeCCCE-EEEEeCCCeEEEEeCCCCcEEE--EEecCCceEEEEEcc
Q psy9319 80 DAAELTCIRTFQRL-----------DWPVRAISFSHDGAL-IASGSEDLTIDIAHVESGKKVY--DICIQAATFTVAWHP 145 (432)
Q Consensus 80 d~~~~~~~~~~~~h-----------~~~V~~i~~spdg~~-l~sgs~dg~V~vwd~~~~~~~~--~~~~~~~V~~l~fsp 145 (432)
|..+++++.++..+ ...+.++.++|++.. +++...++.|.+||+.++..+. .+.+...+.++.|+|
T Consensus 254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~sp 333 (543)
T 1nir_A 254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDS 333 (543)
T ss_dssp ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECT
T ss_pred eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECC
Confidence 99999998887642 237899999997664 5566788999999998876544 555666788999999
Q ss_pred CCcEEEEEE-CCCeEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceecc-Cccee
Q psy9319 146 KQYLLAYAC-DDKYDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKK-KDYRV 223 (432)
Q Consensus 146 dg~~l~s~s-~d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~-~D~~l 223 (432)
+|+++++++ .+++ |.+||+.+++++..+..+.+..-. +.-.+ ..|.... + +.+.+ .|.+|
T Consensus 334 dg~~l~va~~~~~~--------v~v~D~~tg~l~~~i~~g~~ph~g-------~g~~~-~~p~~g~-~-~~s~~~~d~~V 395 (543)
T 1nir_A 334 SHRYFMTAANNSNK--------VAVIDSKDRRLSALVDVGKTPHPG-------RGANF-VHPKYGP-V-WSTSHLGDGSI 395 (543)
T ss_dssp TSCEEEEEEGGGTE--------EEEEETTTTEEEEEEECSSSBCCT-------TCEEE-EETTTEE-E-EEEEBSSSSEE
T ss_pred CCCEEEEEecCCCe--------EEEEECCCCeEEEeeccCCCCCCC-------CCccc-CCCCCcc-E-EEeccCCCceE
Confidence 999877665 4777 777888888877776543221100 00000 1132222 1 34444 57899
Q ss_pred ecccchh
Q psy9319 224 RADHFNK 230 (432)
Q Consensus 224 R~~d~~~ 230 (432)
++||...
T Consensus 396 ~v~d~~~ 402 (543)
T 1nir_A 396 SLIGTDP 402 (543)
T ss_dssp EEEECCT
T ss_pred EEEEeCC
Confidence 9999876
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.47 E-value=2.6e-12 Score=123.18 Aligned_cols=160 Identities=8% Similarity=-0.018 Sum_probs=118.7
Q ss_pred ccccCCCCcceeeeeeecCCCceeEEEEeecCccee-eEEEccCCcCEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCC
Q psy9319 9 LLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE-QNILKAHPVTCICIEFDPTGKYFAVGSKDA---LVSLWDAAEL 84 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~-~~~l~~h~~~V~~l~~spdg~~L~sgs~dg---~I~iwd~~~~ 84 (432)
.++|+|++..+++++..+. .+.+||..+++. ...+..+..+..+++|+|+|++|+++..++ .|.+||+.++
T Consensus 44 ~~~~s~dg~~l~~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQ-----TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EEEECSSSCEEEEEESTTC-----EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT
T ss_pred eEEEcCCCCEEEEEeCCCC-----eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC
Confidence 7899999986656654343 667788888887 777777777776699999999999655553 8999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEE-eCCCe-EEEEeCCCCcEE-----EEEecCCceEEEEEccCCcEEEEEE-CC
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASG-SEDLT-IDIAHVESGKKV-----YDICIQAATFTVAWHPKQYLLAYAC-DD 156 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sg-s~dg~-V~vwd~~~~~~~-----~~~~~~~~V~~l~fspdg~~l~s~s-~d 156 (432)
..+..+.. ...+.+++|+|+|++++++ ..++. |.+|++.....+ ..+.....+..++|+|+|+++++++ .+
T Consensus 119 ~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 119 KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence 88877764 4567999999999865554 56678 999998764433 2223456689999999999666555 57
Q ss_pred CeEEEEeCCceEEeecCCCce---eeeec
Q psy9319 157 KYDRKQDCGNLKVFGFLPEPI---KKRKR 182 (432)
Q Consensus 157 ~~I~vwd~~~i~vwd~~~~~~---~~~~~ 182 (432)
+. +.+||+.++.. +..+.
T Consensus 198 ~~--------v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 198 NS--------IGILETQNPENITLLNAVG 218 (331)
T ss_dssp TE--------EEEEECSSTTSCEEEEEEE
T ss_pred Ce--------EEEEECCCCcccceeeecc
Confidence 77 66666666665 55444
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.46 E-value=9.6e-13 Score=126.15 Aligned_cols=153 Identities=12% Similarity=0.038 Sum_probs=108.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecC--cce--eeEEEccCCcCEEEEEEcCCCCEEEEEeC-CCeEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHH--KLE--EQNILKAHPVTCICIEFDPTGKYFAVGSK-DALVSLW 79 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~--~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~-dg~I~iw 79 (432)
..+.+++|+|++..+++++..++ .+.+|+.. ++. .+..+..+. .+.+++|+|+|++|++++. ++.|.+|
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEF-----RVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTT-----EEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCC-----eEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 45678899999997755544334 45555554 333 444555544 7789999999998876665 8899999
Q ss_pred eCC---CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCC-CcEEE----EEe--cCCceEEEEEccCCc
Q psy9319 80 DAA---ELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVES-GKKVY----DIC--IQAATFTVAWHPKQY 148 (432)
Q Consensus 80 d~~---~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~-~~~~~----~~~--~~~~V~~l~fspdg~ 148 (432)
|+. .+.....+. ....+.+++|+|+|.++++++ .++.|.+||+.+ +.... .+. ....+..++|+|+|.
T Consensus 112 d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 334444444 334688999999999888887 899999999987 65432 222 345788999999999
Q ss_pred EEEEEE-CCCeEEEEeC
Q psy9319 149 LLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 149 ~l~s~s-~d~~I~vwd~ 164 (432)
++++++ .++.|.+||+
T Consensus 191 ~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWEL 207 (343)
T ss_dssp EEEEEETTTTEEEEEES
T ss_pred EEEEEeCCCCEEEEEEe
Confidence 776665 7788555554
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=5.5e-13 Score=142.71 Aligned_cols=150 Identities=9% Similarity=-0.015 Sum_probs=115.8
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
.|..++|+|++..+++++ . ..+.+||..++. ....+..|...+.+++|||||++|++++ ++.|++||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~-~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL-G------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEE-T------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEe-C------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence 378899999999875543 2 578888887773 4556778888999999999999999988 46999999998
Q ss_pred CeeEEEEeeCCCC----------------EEEEEEeeCCCEEEEEeCCC-------------------------------
Q psy9319 84 LTCIRTFQRLDWP----------------VRAISFSHDGALIASGSEDL------------------------------- 116 (432)
Q Consensus 84 ~~~~~~~~~h~~~----------------V~~i~~spdg~~l~sgs~dg------------------------------- 116 (432)
+........+... +.+++|||||++|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 8766544444332 47899999999999987665
Q ss_pred --eEEEEeCCC-CcEEEEE---ecCCceEEEEEccCCcEEEEEEC-----CCeEEEEeC
Q psy9319 117 --TIDIAHVES-GKKVYDI---CIQAATFTVAWHPKQYLLAYACD-----DKYDRKQDC 164 (432)
Q Consensus 117 --~V~vwd~~~-~~~~~~~---~~~~~V~~l~fspdg~~l~s~s~-----d~~I~vwd~ 164 (432)
.|++||+.+ ++..... .+...+.+++| |||++|++++. +..|++||+
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~ 319 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTL 319 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEET
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEEC
Confidence 899999998 8765543 25567899999 99999987764 345555554
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.43 E-value=4.6e-13 Score=139.63 Aligned_cols=145 Identities=10% Similarity=-0.085 Sum_probs=112.1
Q ss_pred ccccCCCCccee-eeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC----CeEEEEeCCC
Q psy9319 9 LLGLNPRPSLYQ-SSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD----ALVSLWDAAE 83 (432)
Q Consensus 9 ~l~~~p~~~~l~-~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d----g~I~iwd~~~ 83 (432)
...|+|++..++ ++++.|.. .+||..+++.......+. .+++|||||++|++++.+ +.|++||+.+
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~------~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRV------ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCE------EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred eeeeCCCCCeEEEEecCCCCc------eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 457788876543 44333322 256766776655544433 789999999999988877 7899999998
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCC--eEEEEeCCCCcEEEEEe-cCCceEEEE--------EccCCcEEEE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSEDL--TIDIAHVESGKKVYDIC-IQAATFTVA--------WHPKQYLLAY 152 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg--~V~vwd~~~~~~~~~~~-~~~~V~~l~--------fspdg~~l~s 152 (432)
+... .+..|.+.+.+++|||||+.|++++.++ .|++||+.+++.. .+. +...+..++ |+|||.++++
T Consensus 185 g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 185 GGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVV 262 (582)
T ss_dssp CCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEE
T ss_pred CCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEE
Confidence 8754 6778888999999999999999888888 8999999999887 444 555566666 9999999999
Q ss_pred EECCCeEEEEeC
Q psy9319 153 ACDDKYDRKQDC 164 (432)
Q Consensus 153 ~s~d~~I~vwd~ 164 (432)
++.++.+++|++
T Consensus 263 ~~~~g~~~l~~~ 274 (582)
T 3o4h_A 263 ARREGRSAVFID 274 (582)
T ss_dssp EEETTEEEEEET
T ss_pred EEcCCcEEEEEE
Confidence 999999777776
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=6e-12 Score=121.03 Aligned_cols=161 Identities=12% Similarity=-0.046 Sum_probs=116.3
Q ss_pred ccccccCCCCcceeeeeee-----c-CCCceeEEEEeecCcce---eeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEE
Q psy9319 7 IPLLGLNPRPSLYQSSVLT-----D-ISPKQLDFKFKEHHKLE---EQNILKAHPVTCICIEFDPTGKYFAVGSKDALVS 77 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~-----D-~~~~~~~i~~~d~~~~~---~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~ 77 (432)
+..+.|+|++..++++... + -......+.+||..+++ .+..+..+ ..+.+++|+|+|+ +++++. .|.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~~--~i~ 169 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAGP--DIY 169 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEESS--SEE
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEccC--cEE
Confidence 6788999999887555422 0 00001367888887743 33444433 4688999999999 555543 499
Q ss_pred EEeCCCCeeEEEEeeCC---------------------------------------------------------------
Q psy9319 78 LWDAAELTCIRTFQRLD--------------------------------------------------------------- 94 (432)
Q Consensus 78 iwd~~~~~~~~~~~~h~--------------------------------------------------------------- 94 (432)
+||+.++..+..+..+.
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 99999887766554321
Q ss_pred -----CCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceE
Q psy9319 95 -----WPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLK 168 (432)
Q Consensus 95 -----~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~ 168 (432)
..+.+++|+| +|.+++++ ++.|.+||+.+++.+..+.....+.+++|+|+|.+|++++.++. +.
T Consensus 250 ~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--------v~ 319 (349)
T 1jmx_B 250 FADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFND--------LA 319 (349)
T ss_dssp EEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSE--------EE
T ss_pred cccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCe--------EE
Confidence 1355677889 99999888 88999999999998888876677889999999998888888888 66
Q ss_pred EeecCCCceeeee
Q psy9319 169 VFGFLPEPIKKRK 181 (432)
Q Consensus 169 vwd~~~~~~~~~~ 181 (432)
+||+.+++.+..+
T Consensus 320 v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 320 VFNPDTLEKVKNI 332 (349)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeccccceeeee
Confidence 6666666655554
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=2.9e-12 Score=123.21 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=88.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCC------cCEEEEEEcCCCCEEEEEeCC------
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHP------VTCICIEFDPTGKYFAVGSKD------ 73 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~------~~V~~l~~spdg~~L~sgs~d------ 73 (432)
.+..++|+|++..+++++..+ ..+.+||..+++....+..+. ..+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 118 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 118 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccc
Confidence 456788999998665554333 357788888888887776432 236789999999999988865
Q ss_pred ------CeEEEEeCCCCe---eEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe
Q psy9319 74 ------ALVSLWDAAELT---CIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 74 ------g~I~iwd~~~~~---~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~ 133 (432)
+.|.+||+.++. .+..+. +...+.+++|+|+|+ +++++. .|.+||+.+++.+..+.
T Consensus 119 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 119 HYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp CEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred ccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccc
Confidence 899999998743 334444 444688999999999 555544 49999999988776654
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.42 E-value=7.2e-12 Score=130.57 Aligned_cols=201 Identities=12% Similarity=-0.076 Sum_probs=127.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeec-CcceeeEEEccCCcCEEEEEEcCCCC--EEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEH-HKLEEQNILKAHPVTCICIEFDPTGK--YFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~-~~~~~~~~l~~h~~~V~~l~~spdg~--~L~sgs~dg~I~iwd~ 81 (432)
+.+..+.|+|+ . ++.++..+.....+.+..++. ..+... .+..+. .+...+|+|+|+ .+++++.+ .+.+||+
T Consensus 65 ~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~ 139 (582)
T 3o4h_A 65 NSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATED-RVALYAL 139 (582)
T ss_dssp SEECEECTTCS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSS-CEEEEEE
T ss_pred cccccccCCCC-e-EEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCC-CceEEEc
Confidence 35778899998 4 445544423334455554554 122222 443332 234668888875 34444444 4559999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----CeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCC
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSED----LTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----g~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
.++........+ . .+++|||||++|++++.+ +.|++||+.+++......+...+..++|||||+.|+++..++
T Consensus 140 ~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 140 DGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp ETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSS
T ss_pred cCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCC
Confidence 988765544433 3 789999999999988876 789999999988765555778899999999999999888888
Q ss_pred --eEEEEeCCceEEeecCCCceeeeecCCCchhhhHHhhhcccccccccCccccccccceeccCcceeecccc
Q psy9319 158 --YDRKQDCGNLKVFGFLPEPIKKRKRGGTMSSWVKAAKVNQKTHRERHQPEDRRKLGLLEKKKDYRVRADHF 228 (432)
Q Consensus 158 --~I~vwd~~~i~vwd~~~~~~~~~~~g~~mss~~~a~~~~~~~h~er~qp~~r~~~glLe~~~D~~lR~~d~ 228 (432)
. |.+||+.++... .+.++.......+... ...-...|++.. ++....|..+++|+.
T Consensus 217 ~~~--------i~~~d~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~spdg~~---~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 217 EAR--------LVTVDPRDGSVE-DLELPSKDFSSYRPTA---ITWLGYLPDGRL---AVVARREGRSAVFID 274 (582)
T ss_dssp CEE--------EEEECTTTCCEE-ECCCSCSHHHHHCCSE---EEEEEECTTSCE---EEEEEETTEEEEEET
T ss_pred eeE--------EEEEcCCCCcEE-EccCCCcChhhhhhcc---ccceeEcCCCcE---EEEEEcCCcEEEEEE
Confidence 5 677787777766 5555443222111000 000002344422 455666777777776
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.41 E-value=9e-12 Score=121.43 Aligned_cols=151 Identities=16% Similarity=0.078 Sum_probs=103.9
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcce-------e------eEEEccCCcCEEEEEEcCCCCEEEEEe-
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE-------E------QNILKAHPVTCICIEFDPTGKYFAVGS- 71 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~-------~------~~~l~~h~~~V~~l~~spdg~~L~sgs- 71 (432)
++.++.|+|++..+++++..+..+ .+|+..... . ......+...+.+++|+|+|+++++++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v-----~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQI-----HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEE-----EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred cceEEEECCCCCEEEEEeCCCCEE-----EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC
Confidence 346789999998776665444443 444333222 1 112223445678999999999887777
Q ss_pred CCCeEEEEeCCCCee--EEEEe---eCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCC--CCc--EEEEEecCCceEE
Q psy9319 72 KDALVSLWDAAELTC--IRTFQ---RLDWPVRAISFSHDGALIASGSE--DLTIDIAHVE--SGK--KVYDICIQAATFT 140 (432)
Q Consensus 72 ~dg~I~iwd~~~~~~--~~~~~---~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~--~~~--~~~~~~~~~~V~~ 140 (432)
.++.|.+||+.++.. +..+. .+...+.+++|+|||++|++++. ++.|.+|++. ++. .+..+.....+.+
T Consensus 231 ~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~ 310 (361)
T 3scy_A 231 IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRN 310 (361)
T ss_dssp TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCE
T ss_pred CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCce
Confidence 689999999987754 23332 23345789999999999877665 4899999985 455 3333444456889
Q ss_pred EEEccCCcEEEEEE-CCCeEEE
Q psy9319 141 VAWHPKQYLLAYAC-DDKYDRK 161 (432)
Q Consensus 141 l~fspdg~~l~s~s-~d~~I~v 161 (432)
++|+|+|++|++++ .++.|.+
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v 332 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQI 332 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEE
Confidence 99999999988887 5677333
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.41 E-value=1.9e-12 Score=144.49 Aligned_cols=150 Identities=13% Similarity=0.009 Sum_probs=123.3
Q ss_pred cccccccC-CCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc-CEEEEEEcCCCCEEEEEeCCCeEE-EEeCC
Q psy9319 6 FIPLLGLN-PRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV-TCICIEFDPTGKYFAVGSKDALVS-LWDAA 82 (432)
Q Consensus 6 ~I~~l~~~-p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~-~V~~l~~spdg~~L~sgs~dg~I~-iwd~~ 82 (432)
.+..+.|+ |++..+++++ ...+.+|+..++.. ..+..|.+ .+.+++|+ ||..|++++.++.+. +||+.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-------~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-------RGQAFIQDVSGTYV-LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-------TTEEEEECTTSSBE-EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT
T ss_pred ccceeeecCCCCCEEEEEE-------cCEEEEEcCCCCce-EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC
Confidence 57889999 9998774443 23567777766654 34677777 89999999 999999999888898 99998
Q ss_pred CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE-ecCCceEEEEEccCCcEEEEEECCC----
Q psy9319 83 ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI-CIQAATFTVAWHPKQYLLAYACDDK---- 157 (432)
Q Consensus 83 ~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~-~~~~~V~~l~fspdg~~l~s~s~d~---- 157 (432)
++... .+.+|...+.+++|||||++|++++.++.|++||+.+++....+ .+...+.+++|+|||++|++++.++
T Consensus 368 ~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~ 446 (1045)
T 1k32_A 368 TGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGET 446 (1045)
T ss_dssp TCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred CCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccc
Confidence 77654 44478889999999999999999999999999999999988777 4778889999999999999887654
Q ss_pred ------eEEEEeCC
Q psy9319 158 ------YDRKQDCG 165 (432)
Q Consensus 158 ------~I~vwd~~ 165 (432)
.|++||+.
T Consensus 447 ~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 447 DGYVMQAIHVYDME 460 (1045)
T ss_dssp CSCCEEEEEEEETT
T ss_pred cCCCCCeEEEEECC
Confidence 77777764
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.41 E-value=1.9e-12 Score=137.86 Aligned_cols=153 Identities=11% Similarity=0.097 Sum_probs=114.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCc-----ceeeEEEccCCcC--------------EEEEEEcCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHK-----LEEQNILKAHPVT--------------CICIEFDPTGK 65 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~-----~~~~~~l~~h~~~--------------V~~l~~spdg~ 65 (432)
..+..+.|+|++..++.+ .| ..+.+|+..+ ++.......+... +.+++|||||+
T Consensus 121 ~~~~~~~~SpdG~~la~~--~~-----~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAYV--RN-----HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp TCCTTCEECTTSSEEEEE--ET-----TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred ccccCCcCCCCCCEEEEE--EC-----CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 456789999999887443 33 4678888877 7665544444333 47899999999
Q ss_pred EEEEEe---------------------------------CCCeEEEEeCCCCeeEEEEe--eCCCCEEEEEEeeCCCEEE
Q psy9319 66 YFAVGS---------------------------------KDALVSLWDAAELTCIRTFQ--RLDWPVRAISFSHDGALIA 110 (432)
Q Consensus 66 ~L~sgs---------------------------------~dg~I~iwd~~~~~~~~~~~--~h~~~V~~i~~spdg~~l~ 110 (432)
+|++++ .+..|.+||+.++....... .|...+.+++|+|||++|+
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 999987 44679999999887654432 4667899999999999999
Q ss_pred EEeCCC-----eEEEEeCCCCcEEEEE-e--cCC---ceEEEEEcc--CCcEEEEEECCCeEEEEeC
Q psy9319 111 SGSEDL-----TIDIAHVESGKKVYDI-C--IQA---ATFTVAWHP--KQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 111 sgs~dg-----~V~vwd~~~~~~~~~~-~--~~~---~V~~l~fsp--dg~~l~s~s~d~~I~vwd~ 164 (432)
+++.++ .|++||+.++.....+ . ... .+.+++|+| +|.++++++.|+.+++|++
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEE
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEE
Confidence 887765 8999999999444333 2 222 246789999 9999999989988666653
No 154
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.40 E-value=1.4e-11 Score=118.05 Aligned_cols=155 Identities=11% Similarity=0.013 Sum_probs=106.7
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCc-ceeeE----EEcc-CCcCEEEEEEcCCCCEEEEEe-CCCe
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHK-LEEQN----ILKA-HPVTCICIEFDPTGKYFAVGS-KDAL 75 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~-~~~~~----~l~~-h~~~V~~l~~spdg~~L~sgs-~dg~ 75 (432)
+...+.++.|+|++..+++++..|.. +.+|+..+ ++... .+.. ....+.+++|+|+|.++++++ .++.
T Consensus 127 ~~~~~~~~~~s~dg~~l~~~~~~~~~-----v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 127 GLDGCHSANISPDNRTLWVPALKQDR-----ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp CCTTBCCCEECTTSSEEEEEEGGGTE-----EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCceEEEECCCCCEEEEecCCCCE-----EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 34457889999999877666545654 45555555 43322 2333 345788999999999776554 7899
Q ss_pred EEEEeCCC--Cee--EEEEee---C---CCCEEEEEEeeCCCEEEEE-eCCCeEEEEeCC--CC--cEEEEEecCCceEE
Q psy9319 76 VSLWDAAE--LTC--IRTFQR---L---DWPVRAISFSHDGALIASG-SEDLTIDIAHVE--SG--KKVYDICIQAATFT 140 (432)
Q Consensus 76 I~iwd~~~--~~~--~~~~~~---h---~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~~--~~--~~~~~~~~~~~V~~ 140 (432)
|.+|++.. +.. ...+.. . ...+.+++|+|+|++|+.+ ..++.|.+||+. ++ ..+..+.....+.+
T Consensus 202 i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 281 (343)
T 1ri6_A 202 VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRG 281 (343)
T ss_dssp EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCC
T ss_pred EEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccce
Confidence 99999953 433 222221 1 2357789999999888754 478999999998 33 34444554455889
Q ss_pred EEEccCCcEEEEEE-CCCeEEEE
Q psy9319 141 VAWHPKQYLLAYAC-DDKYDRKQ 162 (432)
Q Consensus 141 l~fspdg~~l~s~s-~d~~I~vw 162 (432)
++|+|+|.+|++++ .++.|.+|
T Consensus 282 ~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 282 FNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp EEECTTSSEEEEECTTTCEEEEE
T ss_pred EEECCCCCEEEEecCCCCeEEEE
Confidence 99999999888887 57885554
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.39 E-value=3.9e-12 Score=141.93 Aligned_cols=153 Identities=13% Similarity=0.065 Sum_probs=121.7
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEE-EeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFK-FKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~-~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
.+..+.|+ ++..+ ++++.+ ..+. +|+..++.. ..+.+|...+.+++|||||++|++++.++.|++||+.++
T Consensus 339 ~~~~~~~s-dg~~l-~~~s~~-----~~l~~~~d~~~~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 339 RYVRRGGD-TKVAF-IHGTRE-----GDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECSS-SEEEE-EEEETT-----EEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred eEEeeeEc-CCCeE-EEEECC-----CceEEEEECCCCCc-eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 45667788 77665 443332 2444 667766554 345588889999999999999999999999999999999
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCC----------eEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDL----------TIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg----------~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s 154 (432)
.....+.+|.+.+.+++|||||++|++++.++ .|++||+.++.......+...+.+++|+|+|.+|++++
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 88877778999999999999999999887643 89999999887433334777789999999999999999
Q ss_pred CCCeEEEEeCCc
Q psy9319 155 DDKYDRKQDCGN 166 (432)
Q Consensus 155 ~d~~I~vwd~~~ 166 (432)
.++...+|+...
T Consensus 491 ~~~~~~~~~~~~ 502 (1045)
T 1k32_A 491 YRSLDPSPDRVV 502 (1045)
T ss_dssp SCCCCCEECSSS
T ss_pred cccCCcCcchhc
Confidence 988877776543
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.38 E-value=1.1e-11 Score=120.08 Aligned_cols=155 Identities=10% Similarity=0.015 Sum_probs=105.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGS-KDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs-~dg~I~iwd~ 81 (432)
.....++|+|++. +++++..+ ....+.+|+..++. .+..+..+...+.+++|+|+|++|++++ .++.|.+|++
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCcceEEEccCCe-EEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456789999998 53444321 12455666655544 4555556777888999999999888887 6799999999
Q ss_pred C-CCe--eEEEEeeC---------CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC-CCcEEEE--Ee--cCCceEEEEEc
Q psy9319 82 A-ELT--CIRTFQRL---------DWPVRAISFSHDGALIASGSEDLTIDIAHVE-SGKKVYD--IC--IQAATFTVAWH 144 (432)
Q Consensus 82 ~-~~~--~~~~~~~h---------~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~-~~~~~~~--~~--~~~~V~~l~fs 144 (432)
. .+. .+..+... ...+.+++|+|+|++++++..++.|.+||+. ++..... +. ....+..++|+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 6 332 23333211 1248899999999966666678999999998 5543322 22 33467889999
Q ss_pred cCCcEEEEE-ECCCeEEEEe
Q psy9319 145 PKQYLLAYA-CDDKYDRKQD 163 (432)
Q Consensus 145 pdg~~l~s~-s~d~~I~vwd 163 (432)
|+|++++++ ..++.|.+|+
T Consensus 196 pdg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 196 PDGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEE
Confidence 999976665 4567744444
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.37 E-value=3.1e-11 Score=116.82 Aligned_cols=151 Identities=15% Similarity=0.142 Sum_probs=102.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecC-cceee--EEEccC-CcCEEEEEEcCCCCEEEE-EeCCCeEEEEe
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHH-KLEEQ--NILKAH-PVTCICIEFDPTGKYFAV-GSKDALVSLWD 80 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~-~~~~~--~~l~~h-~~~V~~l~~spdg~~L~s-gs~dg~I~iwd 80 (432)
.+.++.|+|++. ++++...+. .+.+|+.. ++... ..+..+ ...+..++|+|||++|++ +..++.|.+|+
T Consensus 142 ~~~~~~~spdg~-l~v~~~~~~-----~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVIDLGSD-----KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp CEEEEEECTTSC-EEEEETTTT-----EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CceEEEECCCCc-EEEEeCCCC-----EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 467799999999 546654444 34555554 34322 222332 236788999999996655 56688999999
Q ss_pred CCC--Cee--EEEEeeCC------CCEEEEEEeeCCCEEE-EEeCCCeEEEEeCCC-C--cEEEEEe-cCCceEEEEEcc
Q psy9319 81 AAE--LTC--IRTFQRLD------WPVRAISFSHDGALIA-SGSEDLTIDIAHVES-G--KKVYDIC-IQAATFTVAWHP 145 (432)
Q Consensus 81 ~~~--~~~--~~~~~~h~------~~V~~i~~spdg~~l~-sgs~dg~V~vwd~~~-~--~~~~~~~-~~~~V~~l~fsp 145 (432)
+.. +.. +..+.... ..+..++|+|||++|+ ++..++.|.+||+.. + ..+..+. +...+..++|+|
T Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 216 YDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp EETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT
T ss_pred ecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC
Confidence 874 543 22333222 3488999999999875 555789999999973 2 3344444 355688999999
Q ss_pred CCcEEEEEECC-CeEEEE
Q psy9319 146 KQYLLAYACDD-KYDRKQ 162 (432)
Q Consensus 146 dg~~l~s~s~d-~~I~vw 162 (432)
+|++|++++.+ +.|.+|
T Consensus 296 dg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp TSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEcCCCcEEEE
Confidence 99998888765 774444
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=138.31 Aligned_cols=140 Identities=14% Similarity=0.171 Sum_probs=106.4
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc---CEEEEEEcCCCCEEEEEeC---------CCe
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV---TCICIEFDPTGKYFAVGSK---------DAL 75 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~---~V~~l~~spdg~~L~sgs~---------dg~ 75 (432)
..+.|+|++.++ +++ .|+ .+.+||..+++....+.+|.. .+.+++|||||++|++++. ++.
T Consensus 19 ~~~~~s~dg~~~-~~~-~d~-----~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 19 FFPNWISGQEYL-HQS-ADN-----NIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCCEESSSSEEE-EEC-TTS-----CEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred CccEECCCCeEE-EEc-CCC-----CEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 578899999533 433 343 577888888888877776654 4889999999999998876 789
Q ss_pred EEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCce---------------
Q psy9319 76 VSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAAT--------------- 138 (432)
Q Consensus 76 I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V--------------- 138 (432)
|++||+.++..+... .....+.+++|||||+.|++++ ++.|++||+.++.+..... +...|
T Consensus 92 i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 92 YYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 999999988762101 1135688999999999999886 7799999999888765332 22222
Q ss_pred --EEEEEccCCcEEEEEECC
Q psy9319 139 --FTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 139 --~~l~fspdg~~l~s~s~d 156 (432)
.+++|||||+.|++++.|
T Consensus 170 ~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEE
T ss_pred CcccEEECCCCCEEEEEEEC
Confidence 489999999999998765
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.32 E-value=8.4e-11 Score=115.19 Aligned_cols=146 Identities=8% Similarity=-0.067 Sum_probs=113.9
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeE
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCI 87 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~ 87 (432)
....|+|++..++.++..++. +.+.+||..+++......++...+.+++|||||+.|+.++.++.|++||+.++...
T Consensus 39 ~~~~~SpDg~~l~~~~~~~g~---~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAFDGP---WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp TSCCBCTTSCEEEEEECTTSS---CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred cCccCCCCCCEEEEEEcCCCC---ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 347899999988555443543 35667888888877777777666667789999999999999999999999999877
Q ss_pred EEEeeCCCCEEEEE--EeeCCCEEEEEe----------------------CCCeEEEEeCCCCcEEEEEecCCceEEEEE
Q psy9319 88 RTFQRLDWPVRAIS--FSHDGALIASGS----------------------EDLTIDIAHVESGKKVYDICIQAATFTVAW 143 (432)
Q Consensus 88 ~~~~~h~~~V~~i~--~spdg~~l~sgs----------------------~dg~V~vwd~~~~~~~~~~~~~~~V~~l~f 143 (432)
..+..+...+.... ++|++.+++... .+..|.+||+.+++......+...+..++|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIY 195 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEE
Confidence 66666666555444 488999887432 346899999999987766667778999999
Q ss_pred cc-CCcEEEEEECC
Q psy9319 144 HP-KQYLLAYACDD 156 (432)
Q Consensus 144 sp-dg~~l~s~s~d 156 (432)
+| +|..|++++.+
T Consensus 196 sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 196 RPYDDSTVAFCHEG 209 (388)
T ss_dssp ETTEEEEEEEEECS
T ss_pred CCCCCCEEEEEEec
Confidence 99 99999888764
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.30 E-value=1.3e-11 Score=132.76 Aligned_cols=148 Identities=13% Similarity=0.062 Sum_probs=112.8
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcC-----EEEEEEcCCCCEEEEEeCC--------
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVT-----CICIEFDPTGKYFAVGSKD-------- 73 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~-----V~~l~~spdg~~L~sgs~d-------- 73 (432)
...+.|+|++..+ +++ |+ .|.+|+..++++...+.+|... ...++|||||++|++++.+
T Consensus 19 ~~~~~w~~dg~~~-~~~--~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 19 LYSLRWISDHEYL-YKQ--EN-----NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCEEECSSSEEE-EEE--TT-----EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccccEECCCCcEE-EEc--CC-----cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 5678999999755 443 43 6788898899988888887643 2347899999999998876
Q ss_pred -CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCce------------
Q psy9319 74 -ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAAT------------ 138 (432)
Q Consensus 74 -g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V------------ 138 (432)
+.+.+||+.++.+. .+..|.+.+..++|||||+.||.++ ++.|++||+.++....... +...+
T Consensus 91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred ceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 56779999998754 4666788899999999999999885 6799999999887654322 21112
Q ss_pred -----EEEEEccCCcEEEEEECCCe-EEEEeC
Q psy9319 139 -----FTVAWHPKQYLLAYACDDKY-DRKQDC 164 (432)
Q Consensus 139 -----~~l~fspdg~~l~s~s~d~~-I~vwd~ 164 (432)
..+.|||||+.|++++.|.+ +.+|++
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEE
Confidence 34899999999998875544 666643
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=8.2e-11 Score=115.33 Aligned_cols=152 Identities=9% Similarity=-0.043 Sum_probs=104.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecC-cceeeEEEccC-CcCEEEEEEcCCCCE--EEEEe---------
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHH-KLEEQNILKAH-PVTCICIEFDPTGKY--FAVGS--------- 71 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~-~~~~~~~l~~h-~~~V~~l~~spdg~~--L~sgs--------- 71 (432)
..+..++++|++..++ +++.+ .+.+|+.. +++........ .+.+.+++|+|+|++ +++++
T Consensus 40 ~~~~~~a~spdg~~l~-~~~~~------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIY-GAAMK------KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEE-EEEBT------EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEE-EEccc------eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 3567889999998663 44443 56666654 66554332211 123456899999984 44543
Q ss_pred ----CCCeEEEEeCC-CCeeEEEEe----eCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCC-CCcEE--EEEe---cC
Q psy9319 72 ----KDALVSLWDAA-ELTCIRTFQ----RLDWPVRAISFSHDGALIASGS-EDLTIDIAHVE-SGKKV--YDIC---IQ 135 (432)
Q Consensus 72 ----~dg~I~iwd~~-~~~~~~~~~----~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~-~~~~~--~~~~---~~ 135 (432)
.++++.+|++. .+.....+. .+...+.+++|+|||++|++++ .++.|.+||+. +++.. ..+. +.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 68999999997 465543333 2456799999999999888776 46899999998 77653 2333 25
Q ss_pred CceEEEEEccCCcEEEEEEC-CCeEEEEe
Q psy9319 136 AATFTVAWHPKQYLLAYACD-DKYDRKQD 163 (432)
Q Consensus 136 ~~V~~l~fspdg~~l~s~s~-d~~I~vwd 163 (432)
..+..++|+|+|+++++++. ++.|.+|+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 56899999999999888775 67744443
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.26 E-value=7e-11 Score=124.76 Aligned_cols=155 Identities=8% Similarity=-0.093 Sum_probs=114.3
Q ss_pred CcccccccCCCCcceeeeeeecCC-----CceeEEEEeecCc------ceeeEEEc-cCCcCEEEEEEcCCCCEEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDIS-----PKQLDFKFKEHHK------LEEQNILK-AHPVTCICIEFDPTGKYFAVGSK 72 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~-----~~~~~i~~~d~~~------~~~~~~l~-~h~~~V~~l~~spdg~~L~sgs~ 72 (432)
..+..+.|+|++..++++ +.|.. .....+.+|+..+ +. ...+. .+...+.+++|||||++|+.++.
T Consensus 130 ~~~~~~~~spDg~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCM-AEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp EEEEEEEEETTTTEEEEE-EEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred ccccCcEECCCCCEEEEE-EecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 345788999999987444 44421 2346788899877 44 45566 66677889999999999988775
Q ss_pred C--------CeEEEEeCC-CC---eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCC--eEEEEeCCCCcEEEEEecCCc-
Q psy9319 73 D--------ALVSLWDAA-EL---TCIRTFQRLDWPVRAISFSHDGALIASGSEDL--TIDIAHVESGKKVYDICIQAA- 137 (432)
Q Consensus 73 d--------g~I~iwd~~-~~---~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg--~V~vwd~~~~~~~~~~~~~~~- 137 (432)
+ ..|.+||+. ++ .......+|...+.+++|+|||+++++++.++ .|++||+.+++......+...
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBS
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccc
Confidence 5 379999998 56 44444455678899999999999777877787 777888777776544432221
Q ss_pred --------eEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 138 --------TFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 138 --------V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
+.+++|+|++.++++++. +.+++|
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred cCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 457899999999999988 886666
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.23 E-value=7.9e-10 Score=106.80 Aligned_cols=168 Identities=13% Similarity=0.033 Sum_probs=124.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCce-------------------eEEEEeecCcceeeEEEc-cCCcCEEEEEEcCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQ-------------------LDFKFKEHHKLEEQNILK-AHPVTCICIEFDPTG 64 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~-------------------~~i~~~d~~~~~~~~~l~-~h~~~V~~l~~spdg 64 (432)
+.+..++++|++.++ ++...+..+.. ..+.+||..+++.+..+. ++......++++|+|
T Consensus 24 ~~v~~va~d~~G~l~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 24 GQVSGVALDSKNNLV-IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp SCEEEEEECTTCCEE-EEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CCceEEEECCCCCEE-EEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 457889999999877 55555533221 358889988888776664 445678999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCe-eEEEEe---------eCCCCEEEEEEee-CCCEEEEEe-CCCeEEEEeCCCCcEEEEE
Q psy9319 65 KYFAVGSKDALVSLWDAAELT-CIRTFQ---------RLDWPVRAISFSH-DGALIASGS-EDLTIDIAHVESGKKVYDI 132 (432)
Q Consensus 65 ~~L~sgs~dg~I~iwd~~~~~-~~~~~~---------~h~~~V~~i~~sp-dg~~l~sgs-~dg~V~vwd~~~~~~~~~~ 132 (432)
.++++.+.++.|.+||..... .+..+. ++.....+++++| ++.++++.+ .++.|.+|| .++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986442 455552 3445789999999 788888886 699999999 577777776
Q ss_pred ec-C----------CceEEEEEccC-CcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 133 CI-Q----------AATFTVAWHPK-QYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 133 ~~-~----------~~V~~l~fspd-g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
.. . ..+..++++|+ +.++++...++. |.+|+..+|..+..+.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~--------I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR--------IQCFKTDTKEFVREIK 235 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE--------EEEEETTTCCEEEEEC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE--------EEEEECCCCcEEEEEe
Confidence 42 1 22789999998 777777777888 6666666666666553
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.23 E-value=1e-10 Score=125.77 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=102.6
Q ss_pred cccCCCCcceeeeeeecCCCc----eeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Q psy9319 10 LGLNPRPSLYQSSVLTDISPK----QLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELT 85 (432)
Q Consensus 10 l~~~p~~~~l~~s~s~D~~~~----~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~ 85 (432)
+.|||++..+ +.++.+..+. ..++.+||..+++.. .+..|.+.+..++|||||+.||.++ ++.|++||+.++.
T Consensus 67 ~~~Spdg~~l-~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 67 YSISPDGQFI-LLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp EEECTTSSEE-EEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred eEECCCCCEE-EEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc
Confidence 6779999987 4445543332 367889999888755 4777888999999999999999886 6899999998877
Q ss_pred eEEE-EeeCCCCE-----------------EEEEEeeCCCEEEEEeCCC-------------------------------
Q psy9319 86 CIRT-FQRLDWPV-----------------RAISFSHDGALIASGSEDL------------------------------- 116 (432)
Q Consensus 86 ~~~~-~~~h~~~V-----------------~~i~~spdg~~l~sgs~dg------------------------------- 116 (432)
.... ..++...+ .++.|||||+.|+.++.|.
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 5432 22333223 3489999999999875321
Q ss_pred -----eEEEEeCCC---C---cEEEEEe------cCCceEEEEEccCCcEEEEEE
Q psy9319 117 -----TIDIAHVES---G---KKVYDIC------IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 117 -----~V~vwd~~~---~---~~~~~~~------~~~~V~~l~fspdg~~l~s~s 154 (432)
.|++||+.+ + ....... +...+..++|+|||+.++...
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEE
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEe
Confidence 588899988 7 3333221 445588999999999766654
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.23 E-value=1.9e-11 Score=130.47 Aligned_cols=153 Identities=13% Similarity=0.031 Sum_probs=107.6
Q ss_pred ccccccCCCCcceeeeeeecCC---CceeEEEEeecCcceee--EEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDIS---PKQLDFKFKEHHKLEEQ--NILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~---~~~~~i~~~d~~~~~~~--~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
+.+++|||++..++.+...+.. .....+.+||..+++.+ ..+ ...+.+++|||||+.|++++ ++.|++||+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 6788999999987444332211 12467889998888762 222 25688899999999999986 789999999
Q ss_pred CCCeeEEEE-eeCCCCE-----------------EEEEEeeCCCEEEEEeCCC---------------------------
Q psy9319 82 AELTCIRTF-QRLDWPV-----------------RAISFSHDGALIASGSEDL--------------------------- 116 (432)
Q Consensus 82 ~~~~~~~~~-~~h~~~V-----------------~~i~~spdg~~l~sgs~dg--------------------------- 116 (432)
.++...... .++...| .+++|||||++|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 888765322 2232222 4899999999999988552
Q ss_pred -------eEEEEeCCCCcEE--EEE-------ecCCceEEEEEccCCcEEEEEECCC----eEEEEe
Q psy9319 117 -------TIDIAHVESGKKV--YDI-------CIQAATFTVAWHPKQYLLAYACDDK----YDRKQD 163 (432)
Q Consensus 117 -------~V~vwd~~~~~~~--~~~-------~~~~~V~~l~fspdg~~l~s~s~d~----~I~vwd 163 (432)
.|++||+.++... ..+ .+...+.+++|+||+.++++....+ .|.+||
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 7889999888652 111 1455689999999988777754322 355566
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.21 E-value=1.4e-10 Score=122.54 Aligned_cols=140 Identities=12% Similarity=0.013 Sum_probs=102.2
Q ss_pred CCCCcc-eeeeeeecCCCceeEEEEeecC-cc-eeeEEEcc-----CCcCEEEEEEcCCCCEEEEEeCC----------C
Q psy9319 13 NPRPSL-YQSSVLTDISPKQLDFKFKEHH-KL-EEQNILKA-----HPVTCICIEFDPTGKYFAVGSKD----------A 74 (432)
Q Consensus 13 ~p~~~~-l~~s~s~D~~~~~~~i~~~d~~-~~-~~~~~l~~-----h~~~V~~l~~spdg~~L~sgs~d----------g 74 (432)
||++.. ++.+ .+... .|.+++.. ++ .....+.. |...+.+++|||||+.|++++.+ .
T Consensus 87 SPDg~~~la~~--~~~~~---~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 87 RPAGGPLLVFT--HFGDQ---RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp CSSSSCEEEEE--BTTTC---CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred ecCCCeEEEEE--ECCCC---eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 499987 5333 23333 34445543 12 44556666 67788999999999999998877 5
Q ss_pred eEEEEeCCC------CeeEEEEe-eCCCCEEEEEEeeCCCEEEEEeCC--------CeEEEEeCC-CC---cEEEEEe-c
Q psy9319 75 LVSLWDAAE------LTCIRTFQ-RLDWPVRAISFSHDGALIASGSED--------LTIDIAHVE-SG---KKVYDIC-I 134 (432)
Q Consensus 75 ~I~iwd~~~------~~~~~~~~-~h~~~V~~i~~spdg~~l~sgs~d--------g~V~vwd~~-~~---~~~~~~~-~ 134 (432)
.|++||+.+ +.. ..+. .+...+.+++|||||++|+.++.+ ..|++||+. ++ ....... +
T Consensus 162 ~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred EEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 899999987 544 4555 566778889999999999988754 479999998 56 3333333 4
Q ss_pred CCceEEEEEccCCcEEEEEECCCe
Q psy9319 135 QAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 135 ~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
...+..++|+|||+++++++.++.
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSS
T ss_pred CceEcceEECCCCeEEEEECCCCC
Confidence 678999999999998777777773
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.20 E-value=3.2e-10 Score=111.04 Aligned_cols=154 Identities=13% Similarity=0.057 Sum_probs=105.3
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecC-cceee--EEEc--cCCcCEEEEEEcCCCCEEEEEeC-CCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHH-KLEEQ--NILK--AHPVTCICIEFDPTGKYFAVGSK-DALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~-~~~~~--~~l~--~h~~~V~~l~~spdg~~L~sgs~-dg~I~i 78 (432)
..+..+.|+|++..++++...+ ..+.+|+.. +++.. ..+. .|...+..++|+|+|++|++++. ++.|.+
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTA-----NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCC-----CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 4677899999998764443222 246667765 55542 3343 24567899999999999888775 689999
Q ss_pred EeCC--CCeeE---EEEee-------CCC------CEEEEE-EeeCCCEEEEEeCC-C-----eEEEEeCC-CCcEEEE-
Q psy9319 79 WDAA--ELTCI---RTFQR-------LDW------PVRAIS-FSHDGALIASGSED-L-----TIDIAHVE-SGKKVYD- 131 (432)
Q Consensus 79 wd~~--~~~~~---~~~~~-------h~~------~V~~i~-~spdg~~l~sgs~d-g-----~V~vwd~~-~~~~~~~- 131 (432)
|++. ++... ..+.. |.. .+.+++ |+|||++|++++.+ + .|.+|++. ++.....
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~ 299 (365)
T 1jof_A 220 YVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL 299 (365)
T ss_dssp EEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE
T ss_pred EEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee
Confidence 9765 55542 12221 122 488999 99999988876643 2 89999996 5665432
Q ss_pred --Ee-cCCceEEEEEcc---CCcEEEEEECC-CeEEEEe
Q psy9319 132 --IC-IQAATFTVAWHP---KQYLLAYACDD-KYDRKQD 163 (432)
Q Consensus 132 --~~-~~~~V~~l~fsp---dg~~l~s~s~d-~~I~vwd 163 (432)
.. +...+..++|+| +|.+|++++.+ +.|.+|+
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 32 344577899999 89999998765 7744444
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.17 E-value=2.6e-09 Score=100.31 Aligned_cols=149 Identities=8% Similarity=0.031 Sum_probs=108.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK--AHPVTCICIEFDPTGKYFAVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~ 82 (432)
+.+..++++|++.++ ++...+ ..+.+|+. ++..+..+. ++...+.+++++|+|.++++.+.++.|.+||..
T Consensus 121 ~~~~~i~~~~~g~l~-v~~~~~-----~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 121 QHPRGVTVDNKGRII-VVECKV-----MRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp SCEEEEEECTTSCEE-EEETTT-----TEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeCCCCEE-EEECCC-----CEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 456778889988765 443322 24566664 455555554 455678999999999988888889999999985
Q ss_pred CCeeEEEEeeC--CCCEEEEEEeeCCCEEEEEeCCC-eEEEEeCCCCcEEEEEe-cC--CceEEEEEccCCcEEEEEECC
Q psy9319 83 ELTCIRTFQRL--DWPVRAISFSHDGALIASGSEDL-TIDIAHVESGKKVYDIC-IQ--AATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 83 ~~~~~~~~~~h--~~~V~~i~~spdg~~l~sgs~dg-~V~vwd~~~~~~~~~~~-~~--~~V~~l~fspdg~~l~s~s~d 156 (432)
+..+..+..+ ...+.+++++|+|.++++...++ .|.+||. ++..+..+. +. ..+.+++|+|+|.++++ +.+
T Consensus 194 -g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~ 270 (286)
T 1q7f_A 194 -GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKD 270 (286)
T ss_dssp -CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT
T ss_pred -CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCC
Confidence 5566666543 35789999999999888888776 9999995 566666665 22 23778999999987776 678
Q ss_pred CeEEEEe
Q psy9319 157 KYDRKQD 163 (432)
Q Consensus 157 ~~I~vwd 163 (432)
+.|++|+
T Consensus 271 ~~v~v~~ 277 (286)
T 1q7f_A 271 YRLYIYR 277 (286)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 8854444
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.15 E-value=1.2e-09 Score=105.30 Aligned_cols=140 Identities=11% Similarity=0.123 Sum_probs=96.6
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC-------------
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD------------- 73 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d------------- 73 (432)
+..+.|+|++..++.. +.+..-....+.+++..+++.......+ . +.+++|+|||+.|+.++.+
T Consensus 61 ~~~~~~SpDg~~la~~-~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 61 ATMPRISPDGKKIAFM-RANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp CEEEEECTTSSEEEEE-EEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred CCCeEECCCCCEEEEE-EeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 4567899999987443 4432223456777888777665554443 4 9999999999998887642
Q ss_pred --------------CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCC---------eEEEEeCCCCcEEE
Q psy9319 74 --------------ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDL---------TIDIAHVESGKKVY 130 (432)
Q Consensus 74 --------------g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg---------~V~vwd~~~~~~~~ 130 (432)
..|.+||+.++..+..+.. . .+..++|+||| ++++++.++ .|+++| +++...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEE
Confidence 5799999998877455555 3 78899999999 777776542 455556 555433
Q ss_pred EEecCCceEEEEEccCCcEEEEEECCC
Q psy9319 131 DICIQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 131 ~~~~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
...+ ..+..+ +|+|+.|++++.++
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred eccC-cceeeE--CCCCCEEEEEEccc
Confidence 3334 445444 99999888887553
No 170
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.13 E-value=1.2e-09 Score=107.96 Aligned_cols=139 Identities=16% Similarity=0.113 Sum_probs=104.4
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcce---------e-eEEEccCCcCEEEEEEcCCCCEEEEEeCCCe
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE---------E-QNILKAHPVTCICIEFDPTGKYFAVGSKDAL 75 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~---------~-~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~ 75 (432)
.++.+++++...++ ++++.| .+.+|+..+.. . ......+.+ |+.++| |+.+|+++ .++.
T Consensus 39 ~~nlLais~~~gll-~a~~~~------~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLF-VAASGS------KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEE-EEEETT------EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSE
T ss_pred cccEEEEcCCCCEE-EEeCCC------EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCc
Confidence 47889999999887 454444 23345433322 1 112234566 999999 89999998 7899
Q ss_pred EEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEEC
Q psy9319 76 VSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 76 I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~ 155 (432)
|.+||+.+.........|...+.++.+.+. .+++++.||.|.+||+.++.... +...|.+++|||+| ++.|..
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEET
T ss_pred EEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEc
Confidence 999999876666667778888988877654 38889999999999999887653 45679999999999 678999
Q ss_pred CCeEEEE
Q psy9319 156 DKYDRKQ 162 (432)
Q Consensus 156 d~~I~vw 162 (432)
||.+++|
T Consensus 181 dg~i~~~ 187 (388)
T 1xip_A 181 DRSFQSF 187 (388)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9994444
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.13 E-value=2.8e-09 Score=104.60 Aligned_cols=163 Identities=8% Similarity=0.013 Sum_probs=116.9
Q ss_pred ccccCCCCcceeeeeeecCCC----ceeEEEEeecCcceeeEEEccC------CcCEEEEEEcCCCCEEEEEeC--CCeE
Q psy9319 9 LLGLNPRPSLYQSSVLTDISP----KQLDFKFKEHHKLEEQNILKAH------PVTCICIEFDPTGKYFAVGSK--DALV 76 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~D~~~----~~~~i~~~d~~~~~~~~~l~~h------~~~V~~l~~spdg~~L~sgs~--dg~I 76 (432)
.++++|++..+.++...+... ....+.+||..+++.+..+... ......++|+|||++|++++. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 689999999886765433221 2345788998888888877642 234567899999999988864 5789
Q ss_pred EEEeCCCCeeEEE-Eee-------------------------------CCCCE---------------------------
Q psy9319 77 SLWDAAELTCIRT-FQR-------------------------------LDWPV--------------------------- 97 (432)
Q Consensus 77 ~iwd~~~~~~~~~-~~~-------------------------------h~~~V--------------------------- 97 (432)
.+||+.+++.+.. +.. ..+.+
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999887665544 100 00000
Q ss_pred ----------E---------------------------------EEEEeeCCCEEEEEeC-----------CCeEEEEeC
Q psy9319 98 ----------R---------------------------------AISFSHDGALIASGSE-----------DLTIDIAHV 123 (432)
Q Consensus 98 ----------~---------------------------------~i~~spdg~~l~sgs~-----------dg~V~vwd~ 123 (432)
. .++|+|++..++.+.. .+.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 0 1567888777766543 358999999
Q ss_pred CCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCC--ceeeee
Q psy9319 124 ESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPE--PIKKRK 181 (432)
Q Consensus 124 ~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~--~~~~~~ 181 (432)
.+++.+..+.... +.+++|+|+|++|++++. +. |.+||..++ +.+..+
T Consensus 294 ~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~--------v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 294 KTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GN--------VNVYDISQPEPKLLRTI 343 (361)
T ss_dssp TTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SC--------EEEEECSSSSCEEEEEE
T ss_pred CCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-Ce--------EEEEECCCCcceeeEEe
Confidence 9999999998555 999999999999998876 77 777777777 666654
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.13 E-value=5e-09 Score=98.34 Aligned_cols=150 Identities=8% Similarity=0.027 Sum_probs=108.1
Q ss_pred ccccccc-CCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc-cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 6 FIPLLGL-NPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK-AHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 6 ~I~~l~~-~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~-~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
.+..+++ .+++.++++....+ ..+.+|+ .++..+..+. .+...+.+++++|+|.++++.+.++.|.+||..
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~-----~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 150 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPT-----HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN- 150 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGG-----CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CceEEEEEcCCCeEEEEcCCCC-----CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-
Confidence 4566777 46666553331112 3466777 4666666664 344678999999999988888888999999975
Q ss_pred CeeEEEEe--eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecC---CceEEEEEccCCcEEEEEECCC-
Q psy9319 84 LTCIRTFQ--RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQ---AATFTVAWHPKQYLLAYACDDK- 157 (432)
Q Consensus 84 ~~~~~~~~--~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~---~~V~~l~fspdg~~l~s~s~d~- 157 (432)
+..+..+. .+...+.+++++|+|.++++.+.++.|.+||. ++..+..+... ..+..++++|+|.++++...++
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF 229 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCE
Confidence 55555554 34457899999999998888788999999997 56666666532 5688999999999888887775
Q ss_pred eEEEEe
Q psy9319 158 YDRKQD 163 (432)
Q Consensus 158 ~I~vwd 163 (432)
.|.+||
T Consensus 230 ~i~~~~ 235 (286)
T 1q7f_A 230 NLTIFT 235 (286)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 844443
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.11 E-value=3.1e-10 Score=111.03 Aligned_cols=147 Identities=5% Similarity=-0.112 Sum_probs=104.5
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~ 86 (432)
+..++|+|++..++.++..++. ..+.+++..+++......++.....++.|||||+.|+.++.++.|.+||+.++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~---~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN---RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS---CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCC---ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6778999999987555444333 3456778777765444333333333478999999999999999999999998876
Q ss_pred EEEEeeCCCCEEE-------------------EEEeeCCCEEEEE-----eCCCeEEEEeCCCCcEEEEEecCCceEEEE
Q psy9319 87 IRTFQRLDWPVRA-------------------ISFSHDGALIASG-----SEDLTIDIAHVESGKKVYDICIQAATFTVA 142 (432)
Q Consensus 87 ~~~~~~h~~~V~~-------------------i~~spdg~~l~sg-----s~dg~V~vwd~~~~~~~~~~~~~~~V~~l~ 142 (432)
...+..+...... +.|+|++..++.+ ..+..|++||+.+++......+...+..+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 194 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPI 194 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccce
Confidence 6555544442222 3456777665544 356789999999988776666777899999
Q ss_pred Ecc-CCcEEEEEECC
Q psy9319 143 WHP-KQYLLAYACDD 156 (432)
Q Consensus 143 fsp-dg~~l~s~s~d 156 (432)
|+| ++..|+.++.+
T Consensus 195 ~sp~dg~~l~~~~~~ 209 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEG 209 (396)
T ss_dssp EETTEEEEEEEEECS
T ss_pred ECCCCCCEEEEEecC
Confidence 999 88877777643
No 174
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=7.9e-09 Score=100.41 Aligned_cols=154 Identities=7% Similarity=-0.015 Sum_probs=98.3
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCc--ce--eeEEEccCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHK--LE--EQNILKAHPVTCICIEFDPTGKYFAVGS-KDALVSLWD 80 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~--~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs-~dg~I~iwd 80 (432)
....++|+|++..+++++ .+.. ....+.+|+... +. .+..+..+......+++ +|++|++++ .++.|.+|+
T Consensus 51 ~p~~l~~spdg~~l~~~~-~~~~-~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVN-EFSK-DQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CCCSEEECTTSSEEEEEE-CCSS-TTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCceEEECCCCCEEEEEE-ccCC-CCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 346789999998774443 3310 123444444332 43 34445555566777887 788777766 578999999
Q ss_pred CCCCeeEE----EEe--e--------CCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCcE--------------EEE
Q psy9319 81 AAELTCIR----TFQ--R--------LDWPVRAISFSHDGALIASGS-EDLTIDIAHVESGKK--------------VYD 131 (432)
Q Consensus 81 ~~~~~~~~----~~~--~--------h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~~~--------------~~~ 131 (432)
+.....+. .+. + +...+.+++|+|+|+++++++ .++.|.+|++..... ...
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 87432221 111 1 123468899999999776655 588999998875431 112
Q ss_pred EecCCceEEEEEccCCcEEEEEE-CCCeEEEEe
Q psy9319 132 ICIQAATFTVAWHPKQYLLAYAC-DDKYDRKQD 163 (432)
Q Consensus 132 ~~~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd 163 (432)
......+..++|+|+|+++++++ .++.|.+||
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 23556688999999999888777 578844444
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.08 E-value=6.8e-09 Score=99.59 Aligned_cols=142 Identities=13% Similarity=0.064 Sum_probs=109.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..|..+.|+|++..+ +..+.+..+..| .+.....+.++...+.+++|+|+|.+++++..++.|.+||..++
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~ 76 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSA-VPIISESELQTI--------TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK 76 (333)
T ss_dssp CCCCBCCSCGGGGCS-SCCCCGGGSCEE--------ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred cccceeeecCCccce-eEEeecccCccc--------ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 457889999988766 444566666655 23455667777777899999999998888888999999999988
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----CeEEEEeCCCCcEEEEEe---cCCceEEEEEccCCcEEEEEEC
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSED----LTIDIAHVESGKKVYDIC---IQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----g~V~vwd~~~~~~~~~~~---~~~~V~~l~fspdg~~l~s~s~ 155 (432)
........+...+.+++|+|+|.+++++..+ +.|.+||..++.....+. ....+.+++++|+|.++++...
T Consensus 77 ~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 77 EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 7655444567789999999999988877766 689999998887653332 3456889999999988876653
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.08 E-value=2.1e-09 Score=114.85 Aligned_cols=156 Identities=9% Similarity=0.033 Sum_probs=110.4
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCe-----------
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDAL----------- 75 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~----------- 75 (432)
+..+.|||++..++.+.+ +.......|++||+.+++.......+ ..+.+++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~-~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLS-ASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEECTTSSEEEEEEE-ETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEECCCCCEEEEEEc-CCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 567889999998854444 33334568899999998876543222 22567999999999999888766
Q ss_pred -----EEEEeCCCCee--EEEEee--CCCCEEEEEEeeCCCEEEEEeC-----CCeEEEEeCCC------Cc-EEEEEe-
Q psy9319 76 -----VSLWDAAELTC--IRTFQR--LDWPVRAISFSHDGALIASGSE-----DLTIDIAHVES------GK-KVYDIC- 133 (432)
Q Consensus 76 -----I~iwd~~~~~~--~~~~~~--h~~~V~~i~~spdg~~l~sgs~-----dg~V~vwd~~~------~~-~~~~~~- 133 (432)
|++|++.++.. ...+.. |...+.++.|||||++|+.++. +..|++||+.+ +. ....+.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 99999987763 233332 4556889999999999987764 56899999986 53 234443
Q ss_pred cCCceEEEEEccCCcEEEEEECCC----eEEEEeCC
Q psy9319 134 IQAATFTVAWHPKQYLLAYACDDK----YDRKQDCG 165 (432)
Q Consensus 134 ~~~~V~~l~fspdg~~l~s~s~d~----~I~vwd~~ 165 (432)
+...+.. .|+|+|..|+..+..+ .|.+||+.
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 4444544 5889998877776533 46677664
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.06 E-value=3e-09 Score=102.67 Aligned_cols=151 Identities=10% Similarity=0.005 Sum_probs=110.0
Q ss_pred cccccccCC-CCcceeeeeeecCCCceeEEEEeecCcceeeEEEccC----------CcCEEEEEEcCC-CCEEEEEeCC
Q psy9319 6 FIPLLGLNP-RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH----------PVTCICIEFDPT-GKYFAVGSKD 73 (432)
Q Consensus 6 ~I~~l~~~p-~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h----------~~~V~~l~~spd-g~~L~sgs~d 73 (432)
....++++| ++.++ ++.+. ....|.+|+ .++..+..+... ......++++|+ |.++++...+
T Consensus 144 ~P~~ia~~~~~g~ly-v~d~~----~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVF-VSDGY----CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp SEEEEEECTTTCCEE-EEECS----SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEeCCCCeEE-EEeCC----CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 456789999 66665 44321 123456666 466777666432 234889999998 7777888889
Q ss_pred CeEEEEeCCCCeeEEEEe--eCCCCEEEEEEeeCCCEEEE-------EeCCCeEEEEeCCCCcEEEEEe----cCCceEE
Q psy9319 74 ALVSLWDAAELTCIRTFQ--RLDWPVRAISFSHDGALIAS-------GSEDLTIDIAHVESGKKVYDIC----IQAATFT 140 (432)
Q Consensus 74 g~I~iwd~~~~~~~~~~~--~h~~~V~~i~~spdg~~l~s-------gs~dg~V~vwd~~~~~~~~~~~----~~~~V~~ 140 (432)
+.|++||..++..+..+. .+...+.+++|+| +..+++ .+.+..|.+||+.+++.+..+. +...+..
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEE
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeE
Confidence 999999999888888774 3556789999999 333333 2334589999999999988873 4556899
Q ss_pred EEEccCCcEEEEEECCCeEEEEe
Q psy9319 141 VAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 141 l~fspdg~~l~s~s~d~~I~vwd 163 (432)
++++|+|.++++...++.|++|+
T Consensus 297 ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEECTTSEEEEEESSSCCEEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEEe
Confidence 99999998888888888844444
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.06 E-value=7.1e-09 Score=99.84 Aligned_cols=140 Identities=11% Similarity=0.132 Sum_probs=97.8
Q ss_pred cccccccCCCCcceeeeee-ecC--CCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC---C--eEE
Q psy9319 6 FIPLLGLNPRPSLYQSSVL-TDI--SPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD---A--LVS 77 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s-~D~--~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d---g--~I~ 77 (432)
.+....+ ++..++.+.. .+. ......+.+|+..+++.. .+ ..+.+++|||||+.|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 3455555 6666533322 221 112566778888777543 33 567899999999999887754 3 488
Q ss_pred EEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC---------------------------CeEEEEeCCCCcEEE
Q psy9319 78 LWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSED---------------------------LTIDIAHVESGKKVY 130 (432)
Q Consensus 78 iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d---------------------------g~V~vwd~~~~~~~~ 130 (432)
+||+.++........ .. +.+++|+|||+.|+.++.+ ..|++||+.+++.+.
T Consensus 89 ~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 889988776554443 34 9999999999999887632 579999999888744
Q ss_pred EEecCCceEEEEEccCCcEEEEEECC
Q psy9319 131 DICIQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 131 ~~~~~~~V~~l~fspdg~~l~s~s~d 156 (432)
.+... .+..++|+|+| ++++++.+
T Consensus 167 ~l~~~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 167 EFEKP-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp EEEEE-TTCEEEEETTE-EEEEEECC
T ss_pred eecCC-CcccccCCCCe-EEEEEecc
Confidence 44434 78899999999 77777654
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.05 E-value=1.4e-08 Score=97.40 Aligned_cols=153 Identities=8% Similarity=-0.009 Sum_probs=107.7
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC----CeEEEEeC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD----ALVSLWDA 81 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d----g~I~iwd~ 81 (432)
.+..+.|+|++.++ +++..+ ..+.+|+..+++.......+...+.+++|+|+|.+++++..+ +.|.+||.
T Consensus 46 ~~~~~~~~~~g~l~-~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 46 QLEGLNFDRQGQLF-LLDVFE-----GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CEEEEEECTTSCEE-EEETTT-----CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred cccCcEECCCCCEE-EEECCC-----CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 34677888888855 443332 356778877776655554567789999999999988877766 68999999
Q ss_pred CCCeeEEEEe--eCCCCEEEEEEeeCCCEEEEEeC------CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEE
Q psy9319 82 AELTCIRTFQ--RLDWPVRAISFSHDGALIASGSE------DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYA 153 (432)
Q Consensus 82 ~~~~~~~~~~--~h~~~V~~i~~spdg~~l~sgs~------dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~ 153 (432)
.++.....+. .+...+.+++++|+|.++++... .+.|..+|..++...........+..++|+|+|..|+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEE
Confidence 8776543333 23457999999999988877654 356777887666654443444557889999999866554
Q ss_pred -ECCCeEEEEeC
Q psy9319 154 -CDDKYDRKQDC 164 (432)
Q Consensus 154 -s~d~~I~vwd~ 164 (432)
+.++.|.+||+
T Consensus 200 ~~~~~~i~~~d~ 211 (333)
T 2dg1_A 200 ETTANRLHRIAL 211 (333)
T ss_dssp EGGGTEEEEEEE
T ss_pred eCCCCeEEEEEe
Confidence 45677544443
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.01 E-value=3.6e-09 Score=112.82 Aligned_cols=155 Identities=8% Similarity=-0.098 Sum_probs=108.9
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee-E-EEccCCcCEEEEEEcCCCCEEEEEeCCCe--------
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ-N-ILKAHPVTCICIEFDPTGKYFAVGSKDAL-------- 75 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~-~-~l~~h~~~V~~l~~spdg~~L~sgs~dg~-------- 75 (432)
.+..+.|||++..++.+.+.++ .....|++||+.+++.+ . .+... ....++|+|||+.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G-~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNA-ADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETT-CSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCC-CceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccC
Confidence 3577899999998855554443 34568999999888764 2 12111 1267899999999999988776
Q ss_pred -----EEEEeCCCCee--EEEE--eeCCCCEEEEEEeeCCCEEEEEeCCC----eEEEEeCCCCcEEEEEecCCceEEEE
Q psy9319 76 -----VSLWDAAELTC--IRTF--QRLDWPVRAISFSHDGALIASGSEDL----TIDIAHVESGKKVYDICIQAATFTVA 142 (432)
Q Consensus 76 -----I~iwd~~~~~~--~~~~--~~h~~~V~~i~~spdg~~l~sgs~dg----~V~vwd~~~~~~~~~~~~~~~V~~l~ 142 (432)
|++|++.++.. ...+ ..|...+.++.|||||++|+.++.++ .|++||..++.......+...+....
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 99999987762 2233 34556789999999999998877665 78888776666555455555666666
Q ss_pred EccCCcEEEEEEC----CCeEEEEeCC
Q psy9319 143 WHPKQYLLAYACD----DKYDRKQDCG 165 (432)
Q Consensus 143 fspdg~~l~s~s~----d~~I~vwd~~ 165 (432)
| |+|. ++..+. ++.|.+||+.
T Consensus 279 ~-~~g~-l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 279 A-WKDR-FYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp E-ETTE-EEEEECTTCTTCEEEEEBTT
T ss_pred e-cCCc-EEEEECCCCCCCEEEEEeCC
Confidence 7 6666 554443 4677777763
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.00 E-value=1.3e-08 Score=96.09 Aligned_cols=152 Identities=11% Similarity=-0.083 Sum_probs=107.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
.....+.|+|++..++.+...++ .+..|+..++ ...+..+...+.+++++|+|.++++...++.|.+||..++
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~-----~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQN-----RTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGT-----EEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred ccccCCeEeCCCCEEEEEeCCCC-----EEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 44567888998874435544433 4567777666 6667777888999999999998888777789999999877
Q ss_pred eeEEEEeeC----CCCEEEEEEeeCCCEEEEEe-----------------CCCeEEEEeCCCCcEEEEEecCCceEEEEE
Q psy9319 85 TCIRTFQRL----DWPVRAISFSHDGALIASGS-----------------EDLTIDIAHVESGKKVYDICIQAATFTVAW 143 (432)
Q Consensus 85 ~~~~~~~~h----~~~V~~i~~spdg~~l~sgs-----------------~dg~V~vwd~~~~~~~~~~~~~~~V~~l~f 143 (432)
......... ...+.+++++|+|+++++.+ ..+.|..++.. +...........+..++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAF 179 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEE
Confidence 754433222 23466899999999888732 13467777765 554444445666789999
Q ss_pred ccCCcEEEEEECCCeEEEEeC
Q psy9319 144 HPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 144 spdg~~l~s~s~d~~I~vwd~ 164 (432)
+|+|..+++.+.++.|.+||+
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCL 200 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEEE
Confidence 999998876677788554443
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.99 E-value=6.6e-09 Score=101.57 Aligned_cols=117 Identities=11% Similarity=-0.044 Sum_probs=92.5
Q ss_pred eecCcceeeEEEccCCcCEEE-----EEEcCCCCEEEEEeC-CC--eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCE
Q psy9319 37 KEHHKLEEQNILKAHPVTCIC-----IEFDPTGKYFAVGSK-DA--LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGAL 108 (432)
Q Consensus 37 ~d~~~~~~~~~l~~h~~~V~~-----l~~spdg~~L~sgs~-dg--~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~ 108 (432)
.+..++..+..+..|...+.. .+|||||+.|+.++. ++ .|.+||+.++.......++...+.++.|||||+.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 367788888889888876666 889999999998887 66 4888999988877666666655657789999999
Q ss_pred EEEEeCCCeEEEEeCCCCcEEEEEec-CCceEEE--EEccCCcEEEEE
Q psy9319 109 IASGSEDLTIDIAHVESGKKVYDICI-QAATFTV--AWHPKQYLLAYA 153 (432)
Q Consensus 109 l~sgs~dg~V~vwd~~~~~~~~~~~~-~~~V~~l--~fspdg~~l~s~ 153 (432)
|+.++.++.|++||+.+++....... ...+... .++|++.+++..
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccc
Confidence 99999999999999999988766653 3334333 348999988753
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.98 E-value=1.9e-08 Score=94.89 Aligned_cols=149 Identities=9% Similarity=-0.001 Sum_probs=116.7
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCC-cCEEEEEEcCCCCEEEEEeC-CCeEEEEeCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHP-VTCICIEFDPTGKYFAVGSK-DALVSLWDAAE 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~-~~V~~l~~spdg~~L~sgs~-dg~I~iwd~~~ 83 (432)
.+.++.++|++.+++ + .+ ..+..+|. +++.+..+..+. ..+.++.+.|+|.++++.+. ++.|..+|. .
T Consensus 38 ~~~~~~~~pdG~ilv-s--~~-----~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~ 107 (276)
T 3no2_A 38 ECNSVAATKAGEILF-S--YS-----KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-K 107 (276)
T ss_dssp CCCEEEECTTSCEEE-E--CB-----SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-T
T ss_pred CCcCeEECCCCCEEE-e--CC-----CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-C
Confidence 467788999998774 3 22 24677887 889998888753 57889999999999999887 778888886 5
Q ss_pred CeeEEEEee------CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCC
Q psy9319 84 LTCIRTFQR------LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 84 ~~~~~~~~~------h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
|+.+..+.. +......+++.++|.++++.+.++.|.+||.. |+.+..+.....+.++.+.++|.++++++.++
T Consensus 108 Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 108 GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTS
T ss_pred CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCC
Confidence 777666642 11245566788999999999999999999998 99999988666777888899999999988888
Q ss_pred eEEEEeCC
Q psy9319 158 YDRKQDCG 165 (432)
Q Consensus 158 ~I~vwd~~ 165 (432)
.|..+|..
T Consensus 187 ~v~~~d~~ 194 (276)
T 3no2_A 187 CFVQLNLE 194 (276)
T ss_dssp EEEEECTT
T ss_pred eEEEEeCc
Confidence 84444443
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.95 E-value=2e-08 Score=94.82 Aligned_cols=148 Identities=13% Similarity=0.058 Sum_probs=102.6
Q ss_pred CcccccccCCCCcceeee---eeec--------CCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSS---VLTD--------ISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD 73 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s---~s~D--------~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d 73 (432)
+.+..+.++|++.++++. ++.+ .......+..++.. + .+..+..+......++|+|+|+.|++.+.+
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAPIRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence 345678899999877432 1110 00011234444443 3 344555666778999999999988777888
Q ss_pred CeEEEEeCC-CCee---EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEE-ccCCc
Q psy9319 74 ALVSLWDAA-ELTC---IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAW-HPKQY 148 (432)
Q Consensus 74 g~I~iwd~~-~~~~---~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~f-spdg~ 148 (432)
+.|.+|++. ++.. ...+..+.+.+.+++++++|+++++. ++.|.+||.. ++.+..+.....+.+++| +|++.
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~ 269 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGR 269 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSC
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCC
Confidence 999999986 4544 23333345567789999999976666 7889999986 777777763333899999 58999
Q ss_pred EEEEEECCC
Q psy9319 149 LLAYACDDK 157 (432)
Q Consensus 149 ~l~s~s~d~ 157 (432)
.|++++.++
T Consensus 270 ~L~v~t~~~ 278 (296)
T 3e5z_A 270 TLYMTVSTE 278 (296)
T ss_dssp EEEEEETTE
T ss_pred EEEEEcCCe
Confidence 888888765
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.95 E-value=1.1e-08 Score=100.40 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=108.5
Q ss_pred CCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCC
Q psy9319 15 RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSK----------DALVSLWDAAEL 84 (432)
Q Consensus 15 ~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~----------dg~I~iwd~~~~ 84 (432)
++..++++......+....+.+||..+++.+..+..+..+ .++|+|||+++++++. +++|.+||+.++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4444434433222234457888999999988888877665 8999999999998863 668999999998
Q ss_pred eeEEEEeeC------CCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEE-EecCCceEEEEEccCC-cEEEEEE
Q psy9319 85 TCIRTFQRL------DWPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYD-ICIQAATFTVAWHPKQ-YLLAYAC 154 (432)
Q Consensus 85 ~~~~~~~~h------~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~-~~~~~~V~~l~fspdg-~~l~s~s 154 (432)
+.+..+... ......++|+|||++|++++. +++|.+||+.+++.+.. +...+. ..+.+.|++ ..+++.+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEEC
Confidence 888877643 245678999999999998873 68999999999988887 654433 335667766 6777888
Q ss_pred CCCeEEEEe
Q psy9319 155 DDKYDRKQD 163 (432)
Q Consensus 155 ~d~~I~vwd 163 (432)
.||.+.+|+
T Consensus 171 ~dg~~~~v~ 179 (361)
T 2oiz_A 171 GDGGLLTIN 179 (361)
T ss_dssp TTSSEEEEE
T ss_pred CCCcEEEEE
Confidence 899844444
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.93 E-value=1.2e-08 Score=100.94 Aligned_cols=131 Identities=11% Similarity=0.036 Sum_probs=102.9
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~ 86 (432)
|..++| ++..+ +.+ .+ ..+.+||+.+......+..|..++.++.+.+. .+++++.||.|.+||+..+..
T Consensus 90 V~~l~f--d~~~L-~v~-~~-----~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 90 VIFVCF--HGDQV-LVS-TR-----NALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST 158 (388)
T ss_dssp EEEEEE--ETTEE-EEE-ES-----SEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE
T ss_pred eeEEEE--CCCEE-EEE-cC-----CcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc
Confidence 777888 66666 443 33 46778887777766677788888988887764 388899999999999997776
Q ss_pred EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE--EEEE------e----cCCceEEEEEccCCcEEEEEE
Q psy9319 87 IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK--VYDI------C----IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 87 ~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~--~~~~------~----~~~~V~~l~fspdg~~l~s~s 154 (432)
.. +...|+|++|||+| ++.|..||++.+|+..++.. ...+ . +...|.++.|.+++.++++=+
T Consensus 159 ~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 159 KQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 43 44589999999999 78899999999999887775 5566 2 467799999999999888643
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.93 E-value=5.8e-09 Score=111.21 Aligned_cols=149 Identities=9% Similarity=-0.076 Sum_probs=98.2
Q ss_pred CCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc------cCCcCEEEEEEcCCCCEEEE-----EeCCCeEEEEeC
Q psy9319 13 NPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK------AHPVTCICIEFDPTGKYFAV-----GSKDALVSLWDA 81 (432)
Q Consensus 13 ~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~------~h~~~V~~l~~spdg~~L~s-----gs~dg~I~iwd~ 81 (432)
+|+|..++.+ ..+..-....+...+...+.....+. +|...+.+++|||||++|+. |+.+..|++||+
T Consensus 76 ~~dG~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYV-RTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEE-EECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEE-EEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 4677766333 33332122333333433443333332 45567899999999999983 444568999999
Q ss_pred CCCeeEEEEeeCCCCE--EEEEEeeCCCEEEEEeCCCe-------------EEEEeCCCCcE--EEEEe---cCCceEEE
Q psy9319 82 AELTCIRTFQRLDWPV--RAISFSHDGALIASGSEDLT-------------IDIAHVESGKK--VYDIC---IQAATFTV 141 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V--~~i~~spdg~~l~sgs~dg~-------------V~vwd~~~~~~--~~~~~---~~~~V~~l 141 (432)
.++..+. ..+...+ .+++|+|||+.|+.++.|.. |++|++.++.. ...+. +...+.++
T Consensus 155 ~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 155 DSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 9987641 1121222 67999999999999988766 99999988762 22232 34578899
Q ss_pred EEccCCcEEEEEECCC----eEEEEeC
Q psy9319 142 AWHPKQYLLAYACDDK----YDRKQDC 164 (432)
Q Consensus 142 ~fspdg~~l~s~s~d~----~I~vwd~ 164 (432)
.|+|||++|++++.++ .|++||.
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 9999999988877665 4555544
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.93 E-value=4.2e-08 Score=104.72 Aligned_cols=150 Identities=7% Similarity=-0.072 Sum_probs=106.4
Q ss_pred ccccccCCCCcceeeeeeecCC-----------CceeEEEEeecCcceee--EEEcc--CCcCEEEEEEcCCCCEEEEEe
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDIS-----------PKQLDFKFKEHHKLEEQ--NILKA--HPVTCICIEFDPTGKYFAVGS 71 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~-----------~~~~~i~~~d~~~~~~~--~~l~~--h~~~V~~l~~spdg~~L~sgs 71 (432)
+..+.|+|++..++.+ +.|.. .....+.+|+..++... ..+.. |...+..+.|||||++|+.++
T Consensus 173 ~~~~~wspDg~~l~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYN-AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECTTSSEEEEE-ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEeCCCEEEEE-EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 4568899999887444 44443 23456888888776532 33333 556688999999999998776
Q ss_pred C-----CCeEEEEeCCC------Ce-eEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----CeEEEEeCCCCcE---EEEE
Q psy9319 72 K-----DALVSLWDAAE------LT-CIRTFQRLDWPVRAISFSHDGALIASGSED----LTIDIAHVESGKK---VYDI 132 (432)
Q Consensus 72 ~-----dg~I~iwd~~~------~~-~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----g~V~vwd~~~~~~---~~~~ 132 (432)
. +..|.+||+.+ +. ....+..+...+.. .|+|+|..|+..+.. +.|.+||+.++.. ...+
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 5 56899999976 43 45667767666655 589999988877653 3699999988742 3333
Q ss_pred ecCC--ceEEEEEccCCcEEEEEECCCe
Q psy9319 133 CIQA--ATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 133 ~~~~--~V~~l~fspdg~~l~s~s~d~~ 158 (432)
.+.. .+..++|++++.+++++..++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 4433 5788999988888888888886
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.90 E-value=1.6e-08 Score=98.80 Aligned_cols=141 Identities=11% Similarity=-0.081 Sum_probs=94.7
Q ss_pred cccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC-CCCEEEEEeCC------CeEEEEeCC
Q psy9319 10 LGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP-TGKYFAVGSKD------ALVSLWDAA 82 (432)
Q Consensus 10 l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp-dg~~L~sgs~d------g~I~iwd~~ 82 (432)
+.++|++..++..... .......+.+||..+++..... .+...+..+.|+| +|..|+.++.+ ..|.+||+.
T Consensus 147 ~~~spdg~~~~~~~~~-~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (396)
T 3c5m_A 147 RDWQPLTSWEKFAEFY-HTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED 224 (396)
T ss_dssp GGCCCCCSHHHHHHHH-HTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT
T ss_pred cccCCCCcceeeeeec-cCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC
Confidence 5677777765332210 0013356778888777655444 5667889999999 88877766543 368889987
Q ss_pred CCeeEEEEeeC--CCCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEEEEecCCceEEEEEcc-CCcEEEEEE
Q psy9319 83 ELTCIRTFQRL--DWPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKVYDICIQAATFTVAWHP-KQYLLAYAC 154 (432)
Q Consensus 83 ~~~~~~~~~~h--~~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~~~~~~~~V~~l~fsp-dg~~l~s~s 154 (432)
++... .+..+ ...+..++|+|||++|+.++.+ +.|++||+.+++......... .. +.|+| +|.++++++
T Consensus 225 ~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 225 GSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp SCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEE
T ss_pred CCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEec
Confidence 65433 33333 2358889999999988777543 459999999887654433332 33 89999 999888765
Q ss_pred C
Q psy9319 155 D 155 (432)
Q Consensus 155 ~ 155 (432)
.
T Consensus 302 ~ 302 (396)
T 3c5m_A 302 C 302 (396)
T ss_dssp C
T ss_pred C
Confidence 3
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.89 E-value=3.3e-08 Score=91.53 Aligned_cols=153 Identities=8% Similarity=-0.038 Sum_probs=104.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
..+..+.++|++.++ ++...+. .+..++..+.........+...+.+++++|+|.++++...++.|.+||..+.
T Consensus 108 ~~p~~i~~~~~g~l~-v~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVY-VADRGNN-----RVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp SSEEEEEECTTCCEE-EEEGGGT-----EEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCCcceEECCCCCEE-EEECCCC-----EEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 456778888888755 4433222 3444554433332222233345788999999997777777889999999876
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
........+...+.+++++++|.++++...++.|.+||..+........ +...+.+++++|+|.++++.+.++.|++++
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 5443333344678999999999877777778899999987654433222 235688999999999888888888844433
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.85 E-value=9.1e-08 Score=88.52 Aligned_cols=152 Identities=11% Similarity=-0.017 Sum_probs=104.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc-cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK-AHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~-~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
+.+..++++|++.++ ++.. + ..+..++..... ...+. .....+.+++++|+|.++++...++.|.+|+..+
T Consensus 67 ~~p~~i~~~~~g~l~-v~~~-~-----~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVY-VTDF-N-----NRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTTCCEE-EEET-T-----TEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred CCcceeEECCCCCEE-EEcC-C-----CEEEEEeCCCce-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 456778888888855 4432 2 245666655443 33333 2335689999999999888877788999998765
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
.............+.+++++|+|.++++...++.|.+||..++....... ....+..++++|+|.++++...++.|.+|
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 54332222333467889999999977777778899999988766543322 33568899999999777776667774444
Q ss_pred eC
Q psy9319 163 DC 164 (432)
Q Consensus 163 d~ 164 (432)
|.
T Consensus 219 ~~ 220 (270)
T 1rwi_B 219 LA 220 (270)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.84 E-value=1.1e-07 Score=89.67 Aligned_cols=129 Identities=10% Similarity=-0.004 Sum_probs=103.5
Q ss_pred eEEEEeecCcceeeEEEccCC-cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCC-CCEEEEEEeeCCCEE
Q psy9319 32 LDFKFKEHHKLEEQNILKAHP-VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLD-WPVRAISFSHDGALI 109 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~h~-~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~-~~V~~i~~spdg~~l 109 (432)
..+.+||..+++.+..+..+. ..+.+++++|+|++|+ +.++.|..||. +|+.+..+..+. ..+.++.+.|+|.++
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~l 91 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNAL 91 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEE
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEE
Confidence 456788888999999998876 4678999999999888 45778999999 798888888653 478899999999999
Q ss_pred EEEeC-CCeEEEEeCCCCcEEEEEecC-------CceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 110 ASGSE-DLTIDIAHVESGKKVYDICIQ-------AATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 110 ~sgs~-dg~V~vwd~~~~~~~~~~~~~-------~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
++.+. ++.|..+|. +|+.+..+... .....+++.++|.++++.+.++.|..||.
T Consensus 92 v~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 92 VAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp EEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 99887 888888886 78877776521 23445678999999999999999544444
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.84 E-value=1.7e-07 Score=97.45 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=81.8
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCeeEEEEeeCCCCEEEEEEe----eCC
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAA--ELTCIRTFQRLDWPVRAISFS----HDG 106 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~--~~~~~~~~~~h~~~V~~i~~s----pdg 106 (432)
.+.++|..+++.+..+.... .+.++.|||||+++++++.|+.|.+||+. +++.+..+... .....++|| |||
T Consensus 178 ~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWED 255 (567)
T ss_dssp EEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTT
T ss_pred eEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCC
Confidence 56778888998888887543 45689999999999999999999999996 77777777643 346899999 799
Q ss_pred CEEEEEe-CCCeEEEEeCCCCcEEEEEe
Q psy9319 107 ALIASGS-EDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 107 ~~l~sgs-~dg~V~vwd~~~~~~~~~~~ 133 (432)
+++++++ .+++|.++|..+.+.+..+.
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 9988777 56999999999888877664
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.84 E-value=4.2e-08 Score=105.31 Aligned_cols=156 Identities=17% Similarity=0.043 Sum_probs=106.1
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCe-----------
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDAL----------- 75 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~----------- 75 (432)
+....|||++..++.+. .+.......|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.
T Consensus 165 ~~~~~~SPDG~~la~~~-~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSV-QDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEECTTSSEEEEEE-EETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEeEEECCCCCEEEEEE-cCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 56788999999885444 44333456899999998877543 112222357899999 99988877654
Q ss_pred ---EEEEeCCCCee--EEEEee--CCCCEEEEEEeeCCCEEEEEeCCC-----eEEEEeCCCC--c-EEEEEecCCceEE
Q psy9319 76 ---VSLWDAAELTC--IRTFQR--LDWPVRAISFSHDGALIASGSEDL-----TIDIAHVESG--K-KVYDICIQAATFT 140 (432)
Q Consensus 76 ---I~iwd~~~~~~--~~~~~~--h~~~V~~i~~spdg~~l~sgs~dg-----~V~vwd~~~~--~-~~~~~~~~~~V~~ 140 (432)
|++|++.++.. ...+.. +...+.++.|||||++|+..+.++ .|++||+.++ . ......+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 89999987652 233332 334588999999999988877543 8999999887 4 3333334444544
Q ss_pred EEEccCCcEEEEEECC----CeEEEEeCCc
Q psy9319 141 VAWHPKQYLLAYACDD----KYDRKQDCGN 166 (432)
Q Consensus 141 l~fspdg~~l~s~s~d----~~I~vwd~~~ 166 (432)
.. +|+|..|+..+.+ +.|.+||+..
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 43 4889888887764 3477777643
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.77 E-value=7.5e-07 Score=87.75 Aligned_cols=163 Identities=6% Similarity=-0.133 Sum_probs=111.9
Q ss_pred ccccCCCCcceeeeeeecCCC----ceeEEEEeecCcceeeEEEccC-------CcCEEEEEEcCCCCEEEEEeC--CCe
Q psy9319 9 LLGLNPRPSLYQSSVLTDISP----KQLDFKFKEHHKLEEQNILKAH-------PVTCICIEFDPTGKYFAVGSK--DAL 75 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~D~~~----~~~~i~~~d~~~~~~~~~l~~h-------~~~V~~l~~spdg~~L~sgs~--dg~ 75 (432)
.+.++|++..+.++....... ....+.++|..+++.+..+.-. ......++|+|||++|+.++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 788999999886765432211 1235677788888777766432 123457899999999998874 478
Q ss_pred EEEEeCCCCeeEEE-EeeC--------------------------------------------------C----------
Q psy9319 76 VSLWDAAELTCIRT-FQRL--------------------------------------------------D---------- 94 (432)
Q Consensus 76 I~iwd~~~~~~~~~-~~~h--------------------------------------------------~---------- 94 (432)
|.++| .+++.+.. +... .
T Consensus 150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 99999 87766554 2100 0
Q ss_pred --------------------------------------CCEEEEEEeeCCCEEEEEeC----------CCeEEEEeCCCC
Q psy9319 95 --------------------------------------WPVRAISFSHDGALIASGSE----------DLTIDIAHVESG 126 (432)
Q Consensus 95 --------------------------------------~~V~~i~~spdg~~l~sgs~----------dg~V~vwd~~~~ 126 (432)
.....+.++|++..++.+.. ++.|.++|+.++
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 00011456666676666543 357999999999
Q ss_pred cEEEEEecCCceEEEEEccCCc-EEEEEE-CCCeEEEEeCCceEEeecCCCceeee
Q psy9319 127 KKVYDICIQAATFTVAWHPKQY-LLAYAC-DDKYDRKQDCGNLKVFGFLPEPIKKR 180 (432)
Q Consensus 127 ~~~~~~~~~~~V~~l~fspdg~-~l~s~s-~d~~I~vwd~~~i~vwd~~~~~~~~~ 180 (432)
+.+..+.......+++|+|||+ .++++. .++. +.++|+.+++.+..
T Consensus 309 ~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~--------V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 309 QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV--------LHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe--------EEEEECCCCCEEee
Confidence 9999998777789999999999 677766 4777 66777777666655
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.74 E-value=4e-07 Score=86.00 Aligned_cols=154 Identities=8% Similarity=-0.013 Sum_probs=102.0
Q ss_pred CcccccccCCCCcceeeeeeecC----------CCceeEEEEeecCcceeeEEEccCCcCEEEEEEc----CCCCEEEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDI----------SPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFD----PTGKYFAVG 70 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~----------~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~s----pdg~~L~sg 70 (432)
+.+..+.++|++.+++++ ..+. ......+..++.. ++... +..+......++|+ |+|..|+.+
T Consensus 117 ~~~~~i~~d~~g~l~v~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITA-PAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp BCCCEEEECTTSCEEEEE-CBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEe-cCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEE
Confidence 346788899998876443 2221 0011345555554 44332 22333456889999 999765544
Q ss_pred -eCCCeEEEEeCC-CCee-----EEEEeeCC-CCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEE
Q psy9319 71 -SKDALVSLWDAA-ELTC-----IRTFQRLD-WPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTV 141 (432)
Q Consensus 71 -s~dg~I~iwd~~-~~~~-----~~~~~~h~-~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l 141 (432)
+.++.|.+||+. ++.. ...+..+. ..+..++++++|.++++...++.|.+||..+++.+..+. +...+.++
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i 273 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNL 273 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEE
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeE
Confidence 567899999976 4432 22233333 568899999999988888888999999998777666665 44678999
Q ss_pred EEccCCcEEEEEE-CCCeEEE
Q psy9319 142 AWHPKQYLLAYAC-DDKYDRK 161 (432)
Q Consensus 142 ~fspdg~~l~s~s-~d~~I~v 161 (432)
+|+|+|..|++++ .++.|..
T Consensus 274 ~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 274 HFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EECTTSSEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEE
Confidence 9999999555554 4566333
No 197
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.71 E-value=3.9e-07 Score=87.80 Aligned_cols=122 Identities=9% Similarity=-0.014 Sum_probs=92.5
Q ss_pred eEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCC-----CCEEEEEEeeCC
Q psy9319 32 LDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLD-----WPVRAISFSHDG 106 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~-----~~V~~i~~spdg 106 (432)
..+.++|..+++.+..+.. ......+++++++..+++...++.|.+||+.++.....+.... .....+++ .+
T Consensus 64 ~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~- 140 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YG- 140 (328)
T ss_dssp TEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ET-
T ss_pred CEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-EC-
Confidence 4577889999999888854 4667899999998555554489999999999998877766433 14556777 44
Q ss_pred CEEEEEe--CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECC
Q psy9319 107 ALIASGS--EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 107 ~~l~sgs--~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d 156 (432)
..++.++ .++.|.++|+.+++.+..+........++++|+|++++++..+
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCB
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCC
Confidence 4455444 4889999999999988888766667789999999977776554
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.68 E-value=2.7e-06 Score=79.32 Aligned_cols=149 Identities=7% Similarity=-0.030 Sum_probs=104.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeE-EEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQN-ILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~-~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
+.+.++.++|++.+++++ .. ...+..++.. +.... .+..+...+.+++++++|.++++...++.|..||..
T Consensus 15 ~~~~~i~~d~~g~l~v~~-~~-----~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQ-HK-----ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCEEEEEECTTSCEEEEE-TT-----TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCccceEECCCCCEEEEe-cC-----CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 567888999999877443 21 2345666765 43322 223345678999999999988887778899999986
Q ss_pred CeeEEEEe--eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE-e-cCCceEEEEEccCCcEEEEEECCCeE
Q psy9319 84 LTCIRTFQ--RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI-C-IQAATFTVAWHPKQYLLAYACDDKYD 159 (432)
Q Consensus 84 ~~~~~~~~--~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~-~-~~~~V~~l~fspdg~~l~s~s~d~~I 159 (432)
+.. ..+. .....+.+++++|+|.++++...++.|.+||. ++...... . ....+..++++|+|.++++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 432 2332 24557899999999998888777889999998 66544322 1 34568899999999887776666774
Q ss_pred EEEe
Q psy9319 160 RKQD 163 (432)
Q Consensus 160 ~vwd 163 (432)
..||
T Consensus 165 ~~~~ 168 (299)
T 2z2n_A 165 GRIT 168 (299)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 4444
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.67 E-value=3.1e-07 Score=88.50 Aligned_cols=155 Identities=5% Similarity=-0.085 Sum_probs=108.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCC-----cCEEEEEEcCCCCEEEEEe-CCCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHP-----VTCICIEFDPTGKYFAVGS-KDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~-----~~V~~l~~spdg~~L~sgs-~dg~I~i 78 (432)
.....++++|++.++ ++...+ ..+.++|..+++....+.... .....+++ .++.++++.. .++.|.+
T Consensus 84 ~~p~~i~~~~~g~ly-v~~~~~-----~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAY-VTQIWD-----YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILK 156 (328)
T ss_dssp SSEEEEEEEETTEEE-EEEBSC-----SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEE
T ss_pred CCCcEEEEeCCCeEE-EEECCC-----CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEE
Confidence 344567777777544 443332 456778888888877766433 13456677 3444444443 4889999
Q ss_pred EeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----------CeEEEEeCCCCcEEEEEec--CCceEEEEEccC
Q psy9319 79 WDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSED----------LTIDIAHVESGKKVYDICI--QAATFTVAWHPK 146 (432)
Q Consensus 79 wd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----------g~V~vwd~~~~~~~~~~~~--~~~V~~l~fspd 146 (432)
+|+.++..+..+... .....+.++|+|++++++..+ +.|.++|..+++....+.. ...+..++|+|+
T Consensus 157 iD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 157 IDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp EETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT
T ss_pred EECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC
Confidence 999999888777643 345788999999877776654 7899999999988777753 346889999999
Q ss_pred CcEEEEEECCCeEEEEeCCceEEeecCCCce
Q psy9319 147 QYLLAYACDDKYDRKQDCGNLKVFGFLPEPI 177 (432)
Q Consensus 147 g~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~ 177 (432)
+..|+++.. . +.+||..++..
T Consensus 236 ~~~lyv~~~--~--------v~~~d~~t~~~ 256 (328)
T 3dsm_A 236 RDTLYWINN--D--------IWRMPVEADRV 256 (328)
T ss_dssp SCEEEEESS--S--------EEEEETTCSSC
T ss_pred CCEEEEEcc--E--------EEEEECCCCce
Confidence 998887754 5 56666665554
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.64 E-value=9.5e-07 Score=83.66 Aligned_cols=149 Identities=9% Similarity=0.059 Sum_probs=100.4
Q ss_pred CcccccccCCCCcceeeeeeecCC-----CceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEE-EEeCCCeEEE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDIS-----PKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFA-VGSKDALVSL 78 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~-----~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~-sgs~dg~I~i 78 (432)
+.++.+.++|++.+++.+...+.. .....+..++.. +... .+..+......++|+|+++.|+ +.+.++.|.+
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEE
Confidence 446778899999866433222111 122334444432 3332 2333334568899999998764 5566789999
Q ss_pred EeC--CCCee-----EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecC-CceEEEEEc-cCCcE
Q psy9319 79 WDA--AELTC-----IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQ-AATFTVAWH-PKQYL 149 (432)
Q Consensus 79 wd~--~~~~~-----~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~-~~V~~l~fs-pdg~~ 149 (432)
||+ .++.. ...+..+.+.+..++++++|+++++...++.|.+||..+|+.+..+... ..+.+++|. |++..
T Consensus 176 ~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 176 FDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp EEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred EeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 987 45543 1222233456889999999998888888889999999999998888744 679999998 88877
Q ss_pred EEEEEC
Q psy9319 150 LAYACD 155 (432)
Q Consensus 150 l~s~s~ 155 (432)
|+.++.
T Consensus 256 L~vt~~ 261 (297)
T 3g4e_A 256 MYVTCA 261 (297)
T ss_dssp EEEEEB
T ss_pred EEEEcC
Confidence 665554
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.62 E-value=2.2e-06 Score=84.34 Aligned_cols=125 Identities=11% Similarity=0.019 Sum_probs=93.9
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCeeEEEEeeC-------CC
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS----------KDALVSLWDAAELTCIRTFQRL-------DW 95 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs----------~dg~I~iwd~~~~~~~~~~~~h-------~~ 95 (432)
.+.++|..+++.+..+.....+ .+++||||++++.+. .++.|.+||..+++.+..+... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 6788899999988888765555 899999999998876 3678999999988877766432 12
Q ss_pred CEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEE-EecCCceEEEEEccCC-cEEEEEECCCeEEEEe
Q psy9319 96 PVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYD-ICIQAATFTVAWHPKQ-YLLAYACDDKYDRKQD 163 (432)
Q Consensus 96 ~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~-~~~~~~V~~l~fspdg-~~l~s~s~d~~I~vwd 163 (432)
....+.|+|||++|+.++. ++.|.++| .+++.+.. +..... +.+.|++ ..+++.+.||.+.++|
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEE
Confidence 3568999999999998874 57899999 99998887 654443 4455655 4556667788833333
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.59 E-value=6e-06 Score=76.87 Aligned_cols=151 Identities=9% Similarity=-0.047 Sum_probs=101.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee-eEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE-QNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~-~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
+.+..+.++|++.++++. ..+ ..+..++.. +.. ...+......+.+++++|+|.++++...++.|.+||. +
T Consensus 57 ~~~~~i~~~~~g~l~v~~-~~~-----~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTE-NAA-----NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp CCEEEEEECTTSCEEEEE-TTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred CceeeEEECCCCCEEEeC-CCC-----CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 456677888888766332 212 234555654 322 1222234567899999999988888777889999998 5
Q ss_pred CeeEEE-EeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEE-Ee-cCCceEEEEEccCCcEEEEEECCCeEE
Q psy9319 84 LTCIRT-FQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYD-IC-IQAATFTVAWHPKQYLLAYACDDKYDR 160 (432)
Q Consensus 84 ~~~~~~-~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~-~~-~~~~V~~l~fspdg~~l~s~s~d~~I~ 160 (432)
+..... ...+...+.+++++|+|.++++...++.|..||. ++..... .. ....+..++++++|.++++...++.|.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 544322 2234467899999999988887777889999999 7665443 22 345588999999999777666677744
Q ss_pred EEeC
Q psy9319 161 KQDC 164 (432)
Q Consensus 161 vwd~ 164 (432)
+||.
T Consensus 208 ~~~~ 211 (299)
T 2z2n_A 208 RITT 211 (299)
T ss_dssp EECT
T ss_pred EECC
Confidence 4443
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.58 E-value=1.9e-06 Score=84.94 Aligned_cols=149 Identities=10% Similarity=0.018 Sum_probs=108.0
Q ss_pred ccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe----------CCCeEEEEe
Q psy9319 11 GLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS----------KDALVSLWD 80 (432)
Q Consensus 11 ~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs----------~dg~I~iwd 80 (432)
...|++..++++...... ....+.+.|..+++.+..+.....+ . +++||||++++.++ .++.|.+||
T Consensus 39 ~~~pd~~~vyV~~~~~~~-~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFA-AVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCTTEEEEEECGGGC-SSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCCCCCEEEEEcCcccC-CCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 446888777666432110 1247788899999999998876666 3 99999999887765 367899999
Q ss_pred CCCCeeEEEEeeCC-------CCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEE
Q psy9319 81 AAELTCIRTFQRLD-------WPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLA 151 (432)
Q Consensus 81 ~~~~~~~~~~~~h~-------~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~ 151 (432)
..+++.+..+.-.. .....+.|+|||++++.++. ++.|.++|+.+++.+..+...+. ...+......++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 99999888775322 24567999999999988864 68999999999999998865442 223333445667
Q ss_pred EEECCCeEEEEeC
Q psy9319 152 YACDDKYDRKQDC 164 (432)
Q Consensus 152 s~s~d~~I~vwd~ 164 (432)
+.+.||.+.+.++
T Consensus 194 ~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 194 MHCRDGSLAKVAF 206 (386)
T ss_dssp EEETTSCEEEEEC
T ss_pred EECCCCCEEEEEC
Confidence 7788888444444
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.57 E-value=5.2e-06 Score=78.51 Aligned_cols=159 Identities=9% Similarity=0.023 Sum_probs=100.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc----CCcCEEEEEEcCCCCEEEEEeC--------
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA----HPVTCICIEFDPTGKYFAVGSK-------- 72 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~----h~~~V~~l~~spdg~~L~sgs~-------- 72 (432)
+.+.++.++|++.++ ++. + ..+..+|..+++....... ....+.+++++|+|+++++...
T Consensus 54 ~~~~~i~~~~dG~l~-v~~--~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~ 125 (297)
T 3g4e_A 54 APVSSVALRQSGGYV-ATI--G-----TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVL 125 (297)
T ss_dssp SCEEEEEEBTTSSEE-EEE--T-----TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBC
T ss_pred CceEEEEECCCCCEE-EEE--C-----CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccc
Confidence 456778889998855 332 1 1456677766654333221 1245789999999997765432
Q ss_pred ---CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE-eCCCeEEEEeC--CCCcEE--EEE---e-cCCceEE
Q psy9319 73 ---DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG-SEDLTIDIAHV--ESGKKV--YDI---C-IQAATFT 140 (432)
Q Consensus 73 ---dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~--~~~~~~--~~~---~-~~~~V~~ 140 (432)
.+.|..++.. +.. ..+..+....+.++|+|+++.|+.+ +.++.|.+||+ .+|... ..+ . ....+..
T Consensus 126 ~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 126 ERHQGALYSLFPD-HHV-KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp CTTCEEEEEECTT-SCE-EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred cCCCcEEEEEECC-CCE-EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 2344445543 333 3333344567899999999877554 56789999987 455432 112 2 2356788
Q ss_pred EEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 141 VAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 141 l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
++++++|.+.++...++. |.+|+..+|..+..+
T Consensus 204 ~~~d~~G~lwva~~~~~~--------v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 204 MCIDAEGKLWVACYNGGR--------VIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEBTTSCEEEEEETTTE--------EEEECTTTCCEEEEE
T ss_pred eEECCCCCEEEEEcCCCE--------EEEEcCCCceEEEEE
Confidence 999999988888777788 555555555555444
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.55 E-value=2e-06 Score=91.57 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=101.1
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEE-EccCCcCEEEEEEcCCCCEEEEEeCCC----------
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNI-LKAHPVTCICIEFDPTGKYFAVGSKDA---------- 74 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~-l~~h~~~V~~l~~spdg~~L~sgs~dg---------- 74 (432)
.+..+.|||++..++.+.+ ........|+++|+.+++.+.. +.+. ....++|+ ||+.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~-~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLS-LAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp EEEEEEECTTSSEEEEEEE-CSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred EEEEEEECCCCCEEEEEEe-cCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 3566789999998754433 3334457899999999886543 2221 12567899 999999888774
Q ss_pred ---eEEEEeCCCCee--EEEEe--e-CCCCEEEEEEeeCCCEEEEEeC----CCeEEEEeCCCCc-EEEEEe-cCCceEE
Q psy9319 75 ---LVSLWDAAELTC--IRTFQ--R-LDWPVRAISFSHDGALIASGSE----DLTIDIAHVESGK-KVYDIC-IQAATFT 140 (432)
Q Consensus 75 ---~I~iwd~~~~~~--~~~~~--~-h~~~V~~i~~spdg~~l~sgs~----dg~V~vwd~~~~~-~~~~~~-~~~~V~~ 140 (432)
.|++|++.++.. ...+. . |...+.++.|||||++|+..+. ++.|+++|+.++. ....+. +......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 399999987543 22332 3 4456788999999998865432 2589999998763 333343 4444544
Q ss_pred EEEccCCcEEEEEEC-C---CeEEEEeCC
Q psy9319 141 VAWHPKQYLLAYACD-D---KYDRKQDCG 165 (432)
Q Consensus 141 l~fspdg~~l~s~s~-d---~~I~vwd~~ 165 (432)
. |+++|..|+..+. + +.|..+|+.
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 4 6676665555443 3 455566553
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.55 E-value=4.4e-06 Score=80.32 Aligned_cols=148 Identities=12% Similarity=-0.018 Sum_probs=96.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCC-
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVG-SKDALVSLWDAA- 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sg-s~dg~I~iwd~~- 82 (432)
+.+..+.++|++.+++.+...+.......+..++ +++.. .+..+......++|+|+|+.|+.+ +.++.|.+||+.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 4567888999998664332211111123344444 34433 232333456789999999876554 557899999986
Q ss_pred -CC-ee-----EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEc-cCCcEEEEE
Q psy9319 83 -EL-TC-----IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWH-PKQYLLAYA 153 (432)
Q Consensus 83 -~~-~~-----~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fs-pdg~~l~s~ 153 (432)
++ .. ...+......+..++++++|.++++...++.|.+||. +++.+..+. ....+.+++|+ |++..|+++
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 55 32 2222223456788999999998887777789999998 677777776 34469999998 888766655
Q ss_pred ECC
Q psy9319 154 CDD 156 (432)
Q Consensus 154 s~d 156 (432)
+..
T Consensus 290 ~~~ 292 (326)
T 2ghs_A 290 SAR 292 (326)
T ss_dssp EBC
T ss_pred ecC
Confidence 443
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.54 E-value=1.5e-06 Score=87.02 Aligned_cols=165 Identities=9% Similarity=0.002 Sum_probs=115.0
Q ss_pred ccccCCCCcceeeeeeecCC----CceeEEEEeecCcceeeEEEccC-------CcCEEEEEEcCCCCEEEEEeC--CCe
Q psy9319 9 LLGLNPRPSLYQSSVLTDIS----PKQLDFKFKEHHKLEEQNILKAH-------PVTCICIEFDPTGKYFAVGSK--DAL 75 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~D~~----~~~~~i~~~d~~~~~~~~~l~~h-------~~~V~~l~~spdg~~L~sgs~--dg~ 75 (432)
.+.++|++..++++...... -....+.++|..+++.+..+.-. ......++|+|||++++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 68899999988676542111 02346788899999888877521 122356789999999988764 578
Q ss_pred EEEEeCCCCeeEEEEeeC----------------------------CCC-------------------------------
Q psy9319 76 VSLWDAAELTCIRTFQRL----------------------------DWP------------------------------- 96 (432)
Q Consensus 76 I~iwd~~~~~~~~~~~~h----------------------------~~~------------------------------- 96 (432)
|.+.|+.+++.+.++... .+.
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~ 281 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVW 281 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEE
Confidence 999999887654333210 000
Q ss_pred ------E---------------------------------EEEEEeeCCCEEEEEeC----------CCeEEEEeCCCCc
Q psy9319 97 ------V---------------------------------RAISFSHDGALIASGSE----------DLTIDIAHVESGK 127 (432)
Q Consensus 97 ------V---------------------------------~~i~~spdg~~l~sgs~----------dg~V~vwd~~~~~ 127 (432)
| ..++++|++..++.... ++.|.+.|+.+.+
T Consensus 282 ~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k 361 (426)
T 3c75_H 282 PTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE 361 (426)
T ss_dssp EBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred EeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe
Confidence 0 01566777776665532 3579999999999
Q ss_pred EEEEEecCCceEEEEEccCCc-EEEEEE-CCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 128 KVYDICIQAATFTVAWHPKQY-LLAYAC-DDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 128 ~~~~~~~~~~V~~l~fspdg~-~l~s~s-~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
.+..+........+.|+|||+ +++++. .++. |.++|+.+++.+.++
T Consensus 362 vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~--------VsVID~~t~kvv~tI 409 (426)
T 3c75_H 362 RINKIELGHEIDSINVSQDAEPLLYALSAGTQT--------LHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE--------EEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe--------EEEEECCCCCEEEEe
Confidence 999988666788999999998 888887 4788 667777777766654
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.53 E-value=1.3e-06 Score=90.92 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=85.9
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC--CCcEEEEEecCCce
Q psy9319 61 DPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVE--SGKKVYDICIQAAT 138 (432)
Q Consensus 61 spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~--~~~~~~~~~~~~~V 138 (432)
+|.+.++++...+++|.++|..+++.+.++.. ...+..+.|||||+++++++.|+.|.+||+. +++.+..+......
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P 242 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA 242 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC
Confidence 34456677888899999999999998888863 4467899999999999999999999999996 88888888766678
Q ss_pred EEEEEc----cCCcEEEEEEC-CCeEEEEeCCc
Q psy9319 139 FTVAWH----PKQYLLAYACD-DKYDRKQDCGN 166 (432)
Q Consensus 139 ~~l~fs----pdg~~l~s~s~-d~~I~vwd~~~ 166 (432)
..++|+ |||+++++++. ++.|.++|..+
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 899999 69998887764 47766666544
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.49 E-value=3.6e-06 Score=79.87 Aligned_cols=151 Identities=9% Similarity=-0.092 Sum_probs=100.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAEL 84 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~ 84 (432)
.......|+|++..++.+...+ ..+..|+. ++. ...+..+...+.+++++++|+++++...++.|.+|+.. +
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~-----~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVG-----RRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTT-----TEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCccCCeEeCCCCEEEEEECCC-----CEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 3345567888887444554333 24555665 443 44555667788999999999977766666889999986 5
Q ss_pred eeEEEEeeC----CCCEEEEEEeeCCCEEEE----EeC-------------CCeEEEEeCCCCcEEEEEecCCceEEEEE
Q psy9319 85 TCIRTFQRL----DWPVRAISFSHDGALIAS----GSE-------------DLTIDIAHVESGKKVYDICIQAATFTVAW 143 (432)
Q Consensus 85 ~~~~~~~~h----~~~V~~i~~spdg~~l~s----gs~-------------dg~V~vwd~~~~~~~~~~~~~~~V~~l~f 143 (432)
......... ...+.+++++|+|.++++ |.. .+.|..||..+++..... .......++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~ 195 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAF 195 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEE
Confidence 533222111 134678999999998886 332 356888888777655444 4455678999
Q ss_pred ccCCcEEEEEECC------CeEEEEeC
Q psy9319 144 HPKQYLLAYACDD------KYDRKQDC 164 (432)
Q Consensus 144 spdg~~l~s~s~d------~~I~vwd~ 164 (432)
+|++..|+.+... +.|.+||+
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 9999988777665 56444443
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.49 E-value=5.8e-06 Score=88.59 Aligned_cols=151 Identities=10% Similarity=-0.046 Sum_probs=100.6
Q ss_pred cccccCCCCcceeeeeeecCCC---------ceeEEEEeecCccee--eEEEcc--CCcCEEEEEEcCCCCEEEEEeCCC
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISP---------KQLDFKFKEHHKLEE--QNILKA--HPVTCICIEFDPTGKYFAVGSKDA 74 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~---------~~~~i~~~d~~~~~~--~~~l~~--h~~~V~~l~~spdg~~L~sgs~dg 74 (432)
..+.|+|+ ..++.+ +.|... ....+.+|+..++.. ...+.. +...+..+.|||||++|+.++.++
T Consensus 212 ~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 212 SGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCCEESTT-SEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred ccEEEECC-CEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 46789999 766444 444432 145677888766652 233333 334688999999999988877544
Q ss_pred -----eEEEEeCCCC--eeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC----CeEEEEeCCCC--cEEEEEe-cCCceEE
Q psy9319 75 -----LVSLWDAAEL--TCIRTFQRLDWPVRAISFSHDGALIASGSED----LTIDIAHVESG--KKVYDIC-IQAATFT 140 (432)
Q Consensus 75 -----~I~iwd~~~~--~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d----g~V~vwd~~~~--~~~~~~~-~~~~V~~ 140 (432)
.|.+||+.++ .+...+..+...+... ++|+|..|+..+.+ +.|.+||+.++ .....+. +...+..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999876 3145566666555555 45899988887753 45999999875 2333333 3344667
Q ss_pred EEEccCCcEEEEEECCCeEEEE
Q psy9319 141 VAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 141 l~fspdg~~l~s~s~d~~I~vw 162 (432)
++|+ ++.++++...|+..++|
T Consensus 369 ~~~~-~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp EEEE-BTEEEEEEEETTEEEEE
T ss_pred EEEE-CCEEEEEEEECCEEEEE
Confidence 7887 66778888888885544
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.47 E-value=2.5e-06 Score=84.96 Aligned_cols=151 Identities=3% Similarity=-0.102 Sum_probs=100.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCC--eEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDA--LVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg--~I~iwd~~ 82 (432)
+....++++|++.++ ++... ...|+.+|..++...........+ . ++|+|++..|+++..++ .|.+|+..
T Consensus 131 ~~P~~la~d~~g~ly-v~d~~-----~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVL-AYQRD-----DPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEE-EEETT-----TTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEE-EEecC-----CCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 456788899998866 44322 235677787777665555543333 3 89999999998888766 79999987
Q ss_pred CCeeEEEE----eeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEE----Ee-cCCce-E-EEEEccC-CcEE
Q psy9319 83 ELTCIRTF----QRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYD----IC-IQAAT-F-TVAWHPK-QYLL 150 (432)
Q Consensus 83 ~~~~~~~~----~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~----~~-~~~~V-~-~l~fspd-g~~l 150 (432)
.+.....+ ......+.+++++|++..|+.+..++.|..||..++..... .. ....- . .++|+|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 65543343 21445678999999555566677788999999988764332 11 11111 3 8999995 5666
Q ss_pred EEEECCCeEEEEe
Q psy9319 151 AYACDDKYDRKQD 163 (432)
Q Consensus 151 ~s~s~d~~I~vwd 163 (432)
++-..++.|+.|+
T Consensus 283 v~d~~~~~I~~~~ 295 (409)
T 3hrp_A 283 MSDQNLSSVYKIT 295 (409)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEeCCCCEEEEEe
Confidence 6556677744444
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.45 E-value=1.8e-06 Score=85.00 Aligned_cols=106 Identities=14% Similarity=0.045 Sum_probs=83.5
Q ss_pred EEEcCCCCEEEEEeC-----CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe----------CCCeEEEEe
Q psy9319 58 IEFDPTGKYFAVGSK-----DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS----------EDLTIDIAH 122 (432)
Q Consensus 58 l~~spdg~~L~sgs~-----dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs----------~dg~V~vwd 122 (432)
....|++..++.... ++.|.++|..+++.+.++.....+ . +.+||||++++.++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345789988887765 679999999999999888866665 4 99999999888775 367899999
Q ss_pred CCCCcEEEEEecC--------CceEEEEEccCCcEEEEEEC--CCeEEEEeCC
Q psy9319 123 VESGKKVYDICIQ--------AATFTVAWHPKQYLLAYACD--DKYDRKQDCG 165 (432)
Q Consensus 123 ~~~~~~~~~~~~~--------~~V~~l~fspdg~~l~s~s~--d~~I~vwd~~ 165 (432)
..+++.+..+... .....++|+|||++++++.. ++.|.++|+.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 9999999888632 24567999999999988864 5774444443
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.44 E-value=1.1e-05 Score=80.20 Aligned_cols=151 Identities=11% Similarity=0.014 Sum_probs=101.0
Q ss_pred CCcccccccCC-CCcceeeeeeecCCCceeEEEEeecCcceeeEE----EccCCcCE--EEEEEcCC-CCEEEEEeCCCe
Q psy9319 4 QNFIPLLGLNP-RPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNI----LKAHPVTC--ICIEFDPT-GKYFAVGSKDAL 75 (432)
Q Consensus 4 ~n~I~~l~~~p-~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~----l~~h~~~V--~~l~~spd-g~~L~sgs~dg~ 75 (432)
.+....++++| ++.++ ++ ..+ ..+..++..++..... ..++.+.. ..++|+|+ +.++++.+..+.
T Consensus 218 ~~~p~~iav~p~~g~ly-v~-d~~-----~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLY-FV-DSN-----KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp CSCCCBCEECTTSSEEE-EE-CTT-----CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred cCCcEEEEEeCCCCeEE-EE-ECC-----CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 45567889999 45544 42 222 2566677665543222 22222222 38999995 666667677889
Q ss_pred EEEEeCCCCeeEEEEeeCC---------------CCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCcEEEEEec-----
Q psy9319 76 VSLWDAAELTCIRTFQRLD---------------WPVRAISFSHDGALIASGS-EDLTIDIAHVESGKKVYDICI----- 134 (432)
Q Consensus 76 I~iwd~~~~~~~~~~~~h~---------------~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~~~~~~~~~----- 134 (432)
|..|+.... +..+.++. .....++++|+|.++++-+ .++.|+.||+.++.......+
T Consensus 291 I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g 368 (409)
T 3hrp_A 291 VYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVAS 368 (409)
T ss_dssp EEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBS
T ss_pred EEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCC
Confidence 999998743 34444442 3588999999999777777 889999999878765443333
Q ss_pred ----------CCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 135 ----------QAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 135 ----------~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
-.....++++|+|.++++-..++.|+.++
T Consensus 369 ~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp CCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred cCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 13578899999988888777777754443
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.41 E-value=3.5e-05 Score=71.61 Aligned_cols=150 Identities=5% Similarity=-0.044 Sum_probs=103.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeE-EEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQN-ILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~-~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
..+.++.+++++.++++. .. ...+..++.. +.... .+..+...+.+++++++|.++++...++.|..||..
T Consensus 20 ~~p~~i~~d~~g~l~v~~-~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQ-HK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp CCEEEEEECTTSCEEEEE-TT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCcceeeECCCCCEEEEc-CC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 456778888888876433 21 2345566655 43332 233344678999999999988877778899999988
Q ss_pred CeeEEEEe--eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEE-Ee-cCCceEEEEEccCCcEEEEEECCCeE
Q psy9319 84 LTCIRTFQ--RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYD-IC-IQAATFTVAWHPKQYLLAYACDDKYD 159 (432)
Q Consensus 84 ~~~~~~~~--~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~-~~-~~~~V~~l~fspdg~~l~s~s~d~~I 159 (432)
+... .+. .....+.++++.++|.++++...++.|..+|.. +..... +. ....+..++++|+|.++++...++.|
T Consensus 92 g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 92 GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 5543 232 234678999999999988877778899999987 655422 22 34568899999999976666556774
Q ss_pred EEEeC
Q psy9319 160 RKQDC 164 (432)
Q Consensus 160 ~vwd~ 164 (432)
..+|.
T Consensus 170 ~~~~~ 174 (300)
T 2qc5_A 170 GRITN 174 (300)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 44443
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.41 E-value=1.1e-05 Score=76.08 Aligned_cols=152 Identities=11% Similarity=-0.052 Sum_probs=99.3
Q ss_pred CCcccccccCCCCcceeee------eeecCCCceeEEEEeecCcceeeEEEc----cCCcCEEEEEEcCC-CCEEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSS------VLTDISPKQLDFKFKEHHKLEEQNILK----AHPVTCICIEFDPT-GKYFAVGSK 72 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s------~s~D~~~~~~~i~~~d~~~~~~~~~l~----~h~~~V~~l~~spd-g~~L~sgs~ 72 (432)
......++|+|++.+++++ ...+ ..+..|+..+++...... ++...+.+++++++ |.++++..
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPA-----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEEC-----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCC-----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 3445678889888766441 2222 346677766665543222 24567899999999 76555544
Q ss_pred CCeEEEEeCCCCeeEEE-Eee----CCCCEEEEEEeeCCCEEEEEeCC---------------CeEEEEeCCCCcEEEEE
Q psy9319 73 DALVSLWDAAELTCIRT-FQR----LDWPVRAISFSHDGALIASGSED---------------LTIDIAHVESGKKVYDI 132 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~-~~~----h~~~V~~i~~spdg~~l~sgs~d---------------g~V~vwd~~~~~~~~~~ 132 (432)
...|.+||.. +..... ... ....+.+++++|+|.++++...+ +.|..||.. ++.....
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 4579999998 665332 221 12358899999999988777655 578888876 6654444
Q ss_pred ecCCceEEEEEc----cCCcEEEEE-ECCCeEEEEe
Q psy9319 133 CIQAATFTVAWH----PKQYLLAYA-CDDKYDRKQD 163 (432)
Q Consensus 133 ~~~~~V~~l~fs----pdg~~l~s~-s~d~~I~vwd 163 (432)
........++|+ |+|..++.+ ..++.|.+||
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEE
Confidence 445567889999 999766555 4567755554
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.40 E-value=6.1e-06 Score=78.28 Aligned_cols=148 Identities=12% Similarity=0.007 Sum_probs=98.4
Q ss_pred CcccccccCCCCcceeee---eeec---C-----CCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSS---VLTD---I-----SPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD 73 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s---~s~D---~-----~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d 73 (432)
|.+..+.++|++.++++. +..+ + ......+..++..+++..... .......++|+|||+.|+.+...
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECC
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecC
Confidence 456788899999877421 1110 0 011245666776666554433 33556789999999988777665
Q ss_pred ------CeEEEEeCCCCee--EEEEe-eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEc
Q psy9319 74 ------ALVSLWDAAELTC--IRTFQ-RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWH 144 (432)
Q Consensus 74 ------g~I~iwd~~~~~~--~~~~~-~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fs 144 (432)
+.|.+|++..+.. ...+. ...+....++++++|+++++ +.+ .|.+||. .+..+..+.....+.+++|+
T Consensus 209 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~ 285 (305)
T 3dr2_A 209 EQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGHIPTPGTASNCTFD 285 (305)
T ss_dssp C---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEEEECSSCCCEEEEC
T ss_pred CcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEEEECCCceeEEEEe
Confidence 6899999875431 11111 12344567889999995544 444 4999998 67777777755578999999
Q ss_pred cCCcEEEEEECCC
Q psy9319 145 PKQYLLAYACDDK 157 (432)
Q Consensus 145 pdg~~l~s~s~d~ 157 (432)
|++..|+.++.++
T Consensus 286 ~d~~~L~it~~~~ 298 (305)
T 3dr2_A 286 QAQQRLFITGGPC 298 (305)
T ss_dssp TTSCEEEEEETTE
T ss_pred CCCCEEEEEcCCe
Confidence 9998888887764
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.40 E-value=6.5e-06 Score=82.28 Aligned_cols=141 Identities=9% Similarity=0.015 Sum_probs=101.0
Q ss_pred CCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe----------CCCeEEEEeCCC
Q psy9319 14 PRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS----------KDALVSLWDAAE 83 (432)
Q Consensus 14 p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs----------~dg~I~iwd~~~ 83 (432)
|++..++++...+.... ..+.+.|..+++.+..+.....+ .+++||||++|+.++ .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 44554545543322222 67888999999999998866666 899999999888775 367899999999
Q ss_pred CeeEEEEeeC-------CCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEEEecCCceEEEEEccCC-cEEEEE
Q psy9319 84 LTCIRTFQRL-------DWPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQ-YLLAYA 153 (432)
Q Consensus 84 ~~~~~~~~~h-------~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg-~~l~s~ 153 (432)
++.+..+.-. ......+.|+|||++++.+.. ++.|.+.|+.+++.+..+...+. ....|+| ..+++.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMN 235 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEE
Confidence 9988777532 223567899999999998874 57899999999999888874432 2233433 445555
Q ss_pred ECCCeEE
Q psy9319 154 CDDKYDR 160 (432)
Q Consensus 154 s~d~~I~ 160 (432)
+.||.+.
T Consensus 236 ~~dG~~~ 242 (426)
T 3c75_H 236 CRDGSLA 242 (426)
T ss_dssp ETTSSEE
T ss_pred cCCCCEE
Confidence 6666633
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.40 E-value=4e-05 Score=71.24 Aligned_cols=151 Identities=11% Similarity=-0.086 Sum_probs=101.5
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee-EEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ-NILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~-~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
+.+..+.+++++.++++. .. ...+..++.. +... ..+......+.+++++++|.++++...++.|..||..
T Consensus 62 ~~~~~i~~~~~g~l~v~~-~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTE-NG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CCEEEEEECTTSCEEEEE-TT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-
T ss_pred CcceeEEECCCCCEEEEe-cC-----CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-
Confidence 455677777877766332 11 1235556655 4432 2223344678999999999988887778899999987
Q ss_pred CeeEEE-EeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEECCCeEE
Q psy9319 84 LTCIRT-FQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYACDDKYDR 160 (432)
Q Consensus 84 ~~~~~~-~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~ 160 (432)
+..... +......+.+++++|+|.++++...++.|..+|. ++....... ....+..++++++|.++++....+.|.
T Consensus 134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 134 GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 554422 2223467899999999997777666889999998 665543221 334588999999998777666667755
Q ss_pred EEeC
Q psy9319 161 KQDC 164 (432)
Q Consensus 161 vwd~ 164 (432)
+||.
T Consensus 213 ~~~~ 216 (300)
T 2qc5_A 213 RITT 216 (300)
T ss_dssp EECT
T ss_pred EEcC
Confidence 5543
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.39 E-value=5.6e-06 Score=81.23 Aligned_cols=166 Identities=8% Similarity=-0.091 Sum_probs=111.5
Q ss_pred ccccCCCCcceeeeeee-cCC---CceeEEEEeecCcceeeEEEccC-------CcCEEEEEEcCCCCEEEEEeC--CCe
Q psy9319 9 LLGLNPRPSLYQSSVLT-DIS---PKQLDFKFKEHHKLEEQNILKAH-------PVTCICIEFDPTGKYFAVGSK--DAL 75 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~-D~~---~~~~~i~~~d~~~~~~~~~l~~h-------~~~V~~l~~spdg~~L~sgs~--dg~ 75 (432)
.+.++|++..+.++.+. ++. -....+.++|..+++.+..+..+ ......++|||||++++.+.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 68899999888666532 111 13467899999999999988643 122457899999999988864 456
Q ss_pred EEE--EeCCC------Cee-------------------------------------------------------------
Q psy9319 76 VSL--WDAAE------LTC------------------------------------------------------------- 86 (432)
Q Consensus 76 I~i--wd~~~------~~~------------------------------------------------------------- 86 (432)
|.+ +|+.+ +.+
T Consensus 149 v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~v 228 (368)
T 1mda_H 149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA 228 (368)
T ss_dssp EEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC
T ss_pred EEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEE
Confidence 888 87733 000
Q ss_pred ----EEEEee--CC---------------------CCEEEEEEeeCCCEEEEEeC---------CCeEEEEeCCCCcEEE
Q psy9319 87 ----IRTFQR--LD---------------------WPVRAISFSHDGALIASGSE---------DLTIDIAHVESGKKVY 130 (432)
Q Consensus 87 ----~~~~~~--h~---------------------~~V~~i~~spdg~~l~sgs~---------dg~V~vwd~~~~~~~~ 130 (432)
+..+.. .. .....++++||+..++.+.. ++.+.++|+.+++.+.
T Consensus 229 s~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~ 308 (368)
T 1mda_H 229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred cCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence 000000 00 00001678999888876543 2356699999999999
Q ss_pred EEecCCceEEEEEccCCc-EEEEEE-CCCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 131 DICIQAATFTVAWHPKQY-LLAYAC-DDKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 131 ~~~~~~~V~~l~fspdg~-~l~s~s-~d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
.+........++|+|||+ .++++. .++. +.++|+.+++.+..+.
T Consensus 309 ~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~--------VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 309 PISNGHDSDAIIAAQDGASDNYANSAGTEV--------LDIYDAASDQDQSSVE 354 (368)
T ss_dssp CCEEEEEECEEEECCSSSCEEEEEETTTTE--------EEEEESSSCEEEEECC
T ss_pred EEECCCCcceEEECCCCCEEEEEccCCCCe--------EEEEECCCCcEEEEEE
Confidence 887666789999999997 566666 5888 6666677666666554
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.34 E-value=1.1e-05 Score=85.78 Aligned_cols=142 Identities=9% Similarity=-0.013 Sum_probs=102.7
Q ss_pred EEEEeecCcceeeEEEcc--CC-------cCEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCeeEEEEeeCC------
Q psy9319 33 DFKFKEHHKLEEQNILKA--HP-------VTCICIEFDPTG---KYFAVGSKDALVSLWDAAELTCIRTFQRLD------ 94 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~--h~-------~~V~~l~~spdg---~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~------ 94 (432)
.+..+|..+|+.+..++. |. .....+....+| ..++.++.+|.|+++|..+|+.+..+....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 477889999998877664 21 122233344477 688999999999999999999876654211
Q ss_pred -----CCE------------------------EEEEEeeCCCEEEEEeC-------------------------------
Q psy9319 95 -----WPV------------------------RAISFSHDGALIASGSE------------------------------- 114 (432)
Q Consensus 95 -----~~V------------------------~~i~~spdg~~l~sgs~------------------------------- 114 (432)
.++ ..++++|++.++++.+.
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 011 14688998888877543
Q ss_pred ------------CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 115 ------------DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 115 ------------dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
.+.|..||+.+|+.+..+.+..++....+.+.+..+++++.|+. +++||..+|+.+..+.
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~--------l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGR--------LVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE--------EEEEETTTCCEEEEEE
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCc--------EEEEECCCCceeeeee
Confidence 27899999999999998887766666677778888888999999 5666666666655543
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.34 E-value=3.6e-05 Score=73.85 Aligned_cols=149 Identities=9% Similarity=-0.055 Sum_probs=95.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc---C-CcCEEEEEEcCCCCEEEEEeC------CC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA---H-PVTCICIEFDPTGKYFAVGSK------DA 74 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~---h-~~~V~~l~~spdg~~L~sgs~------dg 74 (432)
+.+.++.++|++.+++++ .+ .+.++|..+++....... . ...+.+++++|+|.++++... .+
T Consensus 90 ~~v~~i~~~~dg~l~v~~--~~------gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~ 161 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS--DD------GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAG 161 (326)
T ss_dssp SCEEEEEEEETTEEEEEE--TT------EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCE
T ss_pred CcceEEEEeCCCeEEEEE--CC------CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCce
Confidence 356777888888766433 11 266777766664332221 1 245889999999997765542 24
Q ss_pred eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE-eCCCeEEEEeCC--CC-cE-----EEEEe-cCCceEEEEEc
Q psy9319 75 LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG-SEDLTIDIAHVE--SG-KK-----VYDIC-IQAATFTVAWH 144 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~~--~~-~~-----~~~~~-~~~~V~~l~fs 144 (432)
.|..++ ++... .+..+......++|+|+++.++.+ +.++.|.+||+. +| .. +..+. ....+..++++
T Consensus 162 ~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d 238 (326)
T 2ghs_A 162 SIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 238 (326)
T ss_dssp EEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred EEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC
Confidence 566666 45543 333344567899999999877655 457899999986 55 31 22222 23456789999
Q ss_pred cCCcEEEEEECCCeEEEEeC
Q psy9319 145 PKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 145 pdg~~l~s~s~d~~I~vwd~ 164 (432)
++|.++++...++.|..||.
T Consensus 239 ~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 239 AEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp TTSCEEEEEETTTEEEEECT
T ss_pred CCCCEEEEEeCCCEEEEECC
Confidence 99988777766777544443
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.31 E-value=4.2e-05 Score=71.40 Aligned_cols=161 Identities=10% Similarity=0.015 Sum_probs=109.2
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCc-CEEEEEEcCCCCEE-EEEeCCCeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPV-TCICIEFDPTGKYF-AVGSKDALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~-~V~~l~~spdg~~L-~sgs~dg~I~iwd~~ 82 (432)
.+.+-+.|+|++.++ ++.+.. ....+.+.|..+++.+..+.-... ....++++ |..| ++.-.++.+.++|..
T Consensus 21 ~f~~Gl~~~~dg~Ly-vstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 21 AFTQGLVYAENDTLF-ESTGLY---GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CCEEEEEECSTTEEE-EEECST---TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred CCcccEEEeCCCeEE-EECCCC---CCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 455778899987655 443221 223577889999998888753222 22345554 4445 445567899999999
Q ss_pred CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecC---C---ceEEEEEccCCcEEEEEECC
Q psy9319 83 ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQ---A---ATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 83 ~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~---~---~V~~l~fspdg~~l~s~s~d 156 (432)
+++.+.++..... ..+.+++||..++++..++.|.++|..+.+.+..+... . .+..+.|. +|..++....+
T Consensus 95 t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 95 TLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp TTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred CCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 9999888863311 12446778888887778899999999999988887622 1 35678887 67554444345
Q ss_pred CeEEEEeCCceEEeecCCCceeeeec
Q psy9319 157 KYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 157 ~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
+. |.+.|..+++++..+.
T Consensus 172 ~~--------V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 172 DC--------IARISAKDGTLLGWIL 189 (266)
T ss_dssp SE--------EEEEETTTCCEEEEEE
T ss_pred Ce--------EEEEECCCCcEEEEEE
Confidence 56 7778888888777664
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.30 E-value=4.1e-05 Score=73.91 Aligned_cols=146 Identities=10% Similarity=0.010 Sum_probs=98.0
Q ss_pred cccccccCCCCcceeeeeeec-CCCceeEEEEeecCcceeeEEE-------ccCCcCEEEEEEcCCCCEEEEEeC-----
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTD-ISPKQLDFKFKEHHKLEEQNIL-------KAHPVTCICIEFDPTGKYFAVGSK----- 72 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D-~~~~~~~i~~~d~~~~~~~~~l-------~~h~~~V~~l~~spdg~~L~sgs~----- 72 (432)
....++++|++.++++...++ +....|.+. +++. ..+ .+|...+.+++++++|+++++-+.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-----~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELT-----QDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEE-----TTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEEC-----CCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 456788999998774432232 224455543 3332 222 235578999999999987666543
Q ss_pred CCeEEEEeCCCCeeEEEEeeC------CCCEEEEEEeeCCCEE-EEEe---CCCeEEEEeCCCCcEEEEEec--------
Q psy9319 73 DALVSLWDAAELTCIRTFQRL------DWPVRAISFSHDGALI-ASGS---EDLTIDIAHVESGKKVYDICI-------- 134 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~~~~h------~~~V~~i~~spdg~~l-~sgs---~dg~V~vwd~~~~~~~~~~~~-------- 134 (432)
++.|.+||+.+++.+..+... ...+..++++|++..+ ++.+ .++.|.+||+.++.....+..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 578999999999877666532 2356899999865444 4444 578999999988876554421
Q ss_pred ----------------------CCceEEEEEccCCcEEEEEECCC
Q psy9319 135 ----------------------QAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 135 ----------------------~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
...+..++|+|+|..|+++..++
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 02357799999998888877665
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.21 E-value=4.1e-05 Score=81.38 Aligned_cols=152 Identities=9% Similarity=-0.025 Sum_probs=98.5
Q ss_pred cccccCCCCcceeeeeeecCC--------CceeEEEEeecCccee--eEEEc--c-CCcCEEEEEEcCCCCEEEEEeC--
Q psy9319 8 PLLGLNPRPSLYQSSVLTDIS--------PKQLDFKFKEHHKLEE--QNILK--A-HPVTCICIEFDPTGKYFAVGSK-- 72 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~--------~~~~~i~~~d~~~~~~--~~~l~--~-h~~~V~~l~~spdg~~L~sgs~-- 72 (432)
..+.|+ ++..++.+ +.|.. .....+.+|+..+... ...+. . |...+..+.|||||++|+..+.
T Consensus 178 ~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYS-SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEE-ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEE-EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 456788 88776443 44432 3446678887766543 23333 3 4456788999999998865432
Q ss_pred --CCeEEEEeCCCCe-eEEEEeeCCCCEEEEEEeeCCCEEEEEeC----CCeEEEEeCCCCcE---EEEEecCCceEEEE
Q psy9319 73 --DALVSLWDAAELT-CIRTFQRLDWPVRAISFSHDGALIASGSE----DLTIDIAHVESGKK---VYDICIQAATFTVA 142 (432)
Q Consensus 73 --dg~I~iwd~~~~~-~~~~~~~h~~~V~~i~~spdg~~l~sgs~----dg~V~vwd~~~~~~---~~~~~~~~~V~~l~ 142 (432)
+..|.++|+.++. ....+..+....... |+++|..|+..+. .+.|..+|+.++.. ...+.+...+. .
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T 332 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence 2489999998763 455666676666665 7777776665543 36799999988765 33344555554 8
Q ss_pred EccCCcEEEEEECCC---eEEEEeC
Q psy9319 143 WHPKQYLLAYACDDK---YDRKQDC 164 (432)
Q Consensus 143 fspdg~~l~s~s~d~---~I~vwd~ 164 (432)
|+|++..|+.+..++ .|.+||+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEEECCEEEEEEEECCeeEEEEEEC
Confidence 999998887766543 4555554
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.20 E-value=3.8e-05 Score=74.20 Aligned_cols=159 Identities=6% Similarity=-0.059 Sum_probs=102.6
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccC------CcCEEEEEEcCCCCE-EEEEe---CCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH------PVTCICIEFDPTGKY-FAVGS---KDA 74 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h------~~~V~~l~~spdg~~-L~sgs---~dg 74 (432)
..+..++++|++.++++.... .......+..||..+++.+..+... ...+..++++|++.. +++.+ .++
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~-~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGN-QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHH-HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eEeeEEEEcCCCcEEEEcCCC-CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 456788899988766443211 0001235677888888877666532 235688999986544 45554 678
Q ss_pred eEEEEeCCCCeeEEEEeeCC-----------------------------CCEEEEEEeeCCCEEEEEeCCC-eEEEEeCC
Q psy9319 75 LVSLWDAAELTCIRTFQRLD-----------------------------WPVRAISFSHDGALIASGSEDL-TIDIAHVE 124 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~h~-----------------------------~~V~~i~~spdg~~l~sgs~dg-~V~vwd~~ 124 (432)
.|.+||+.++.....+.+|. ..+..++|+|+|+.|+.++.++ .+..++..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 99999998877655443321 2368899999999888887655 56555532
Q ss_pred ---CCc--------EEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 125 ---SGK--------KVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 125 ---~~~--------~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
.+. .+....+.+....++++++|.++++...++.|.+||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred HhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 111 0122233445667999999998888888888555554
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.19 E-value=1.2e-07 Score=93.24 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=68.4
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCC-CEE-EEEEeeCCCEEE
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDW-PVR-AISFSHDGALIA 110 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~-~V~-~i~~spdg~~l~ 110 (432)
.+..||..+|+.+..+.. +.+.+..+.+++..+++++.|+.|+.||..+|+.+..+..+.. .+. +..+. ++..++
T Consensus 20 ~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~ 96 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILY 96 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CC
T ss_pred EEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEE
Confidence 578889899999888876 4555555667787888888999999999998887665543311 110 01111 345678
Q ss_pred EEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCcee
Q psy9319 111 SGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIK 178 (432)
Q Consensus 111 sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~ 178 (432)
+|+.|+.|..||..+|+.+..+..... ..++|++..+++++.|+. +..||..+|..+
T Consensus 97 ~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~--------v~a~d~~tG~~~ 153 (369)
T 2hz6_A 97 MGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYT--------ITMYDTKTRELR 153 (369)
T ss_dssp CCEEEEEEEEECCC-------------------------EEEEEEEEE--------EECCCSSSSSCC
T ss_pred EEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCE--------EEEEECCCCCEE
Confidence 888899999999999998887764332 345678888999998888 555555555544
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.19 E-value=7.7e-06 Score=80.25 Aligned_cols=139 Identities=9% Similarity=-0.076 Sum_probs=98.8
Q ss_pred cceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCee
Q psy9319 17 SLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS----------KDALVSLWDAAELTC 86 (432)
Q Consensus 17 ~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs----------~dg~I~iwd~~~~~~ 86 (432)
..++++...+.++.. .+.+.|..+++.+.++.....+ .+.++|||+.++.++ .++.|.+||+.+++.
T Consensus 32 ~~~yV~~~~~~~~~d-~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLPAYFAGTT-ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEECTTTCSSE-EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECCccCCccc-eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 334466555666666 8888999999999999876666 799999999988876 367899999999999
Q ss_pred EEEEeeC-------CCCEEEEEEeeCCCEEEEEeC--CCeEEE--EeCCCCcEEEEEecCCceEEEEEccCC-cEEEEEE
Q psy9319 87 IRTFQRL-------DWPVRAISFSHDGALIASGSE--DLTIDI--AHVESGKKVYDICIQAATFTVAWHPKQ-YLLAYAC 154 (432)
Q Consensus 87 ~~~~~~h-------~~~V~~i~~spdg~~l~sgs~--dg~V~v--wd~~~~~~~~~~~~~~~V~~l~fspdg-~~l~s~s 154 (432)
+.++..+ ......+++||||++++.+.. +..|.+ +|+.+ +..+...+. +.+.|+| ..+++.+
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGS 182 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCC
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEc
Confidence 9888643 123568999999999998874 467888 99877 455543322 2234544 3344456
Q ss_pred CCCeEEEEeC
Q psy9319 155 DDKYDRKQDC 164 (432)
Q Consensus 155 ~d~~I~vwd~ 164 (432)
.|+.+.+.|+
T Consensus 183 ~dg~~~~vd~ 192 (368)
T 1mda_H 183 CPASLAASDL 192 (368)
T ss_dssp CTTSCEEEEC
T ss_pred CCCCEEEEEC
Confidence 6777433333
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.17 E-value=1.8e-05 Score=81.45 Aligned_cols=132 Identities=13% Similarity=0.002 Sum_probs=93.8
Q ss_pred eeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCC------------------------------------
Q psy9319 31 QLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDA------------------------------------ 74 (432)
Q Consensus 31 ~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg------------------------------------ 74 (432)
...+.+.|..+++....+.-.. ....++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 3467788998888877766322 335677899999999888553
Q ss_pred --eEEEEeCCC--Cee-EEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCc------------EEEEEecCC
Q psy9319 75 --LVSLWDAAE--LTC-IRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESGK------------KVYDICIQA 136 (432)
Q Consensus 75 --~I~iwd~~~--~~~-~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~~------------~~~~~~~~~ 136 (432)
.|.+.|..+ +.. +..+.. .....++.++|||++++.++ .+.+|.++|+.+.. .+..+....
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 367777776 444 444432 23567899999999887776 68899999998653 345555667
Q ss_pred ceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 137 ATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 137 ~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
....++|+|+|...++...|+.|.+||+
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 7899999999954455567888555554
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.16 E-value=6.5e-05 Score=79.89 Aligned_cols=141 Identities=9% Similarity=-0.039 Sum_probs=98.4
Q ss_pred EEEEeecCcceeeEEEcc--CC-------cCEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCeeEEEEeeCC-CC---
Q psy9319 33 DFKFKEHHKLEEQNILKA--HP-------VTCICIEFDPTGK---YFAVGSKDALVSLWDAAELTCIRTFQRLD-WP--- 96 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~--h~-------~~V~~l~~spdg~---~L~sgs~dg~I~iwd~~~~~~~~~~~~h~-~~--- 96 (432)
.+..+|..+|+.+..++. |. .++.......+|. .++.++.+|.++++|..+|+.+....-.. ..
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 478889999999887764 21 2222223333565 78899999999999999998874332110 00
Q ss_pred -----------------------------------EEEEEEeeCCCEEEEEeC---------------------------
Q psy9319 97 -----------------------------------VRAISFSHDGALIASGSE--------------------------- 114 (432)
Q Consensus 97 -----------------------------------V~~i~~spdg~~l~sgs~--------------------------- 114 (432)
-..++++|+..++++.+.
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 012688888777776532
Q ss_pred ------------------CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 115 ------------------DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 115 ------------------dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
+|.|..||+.+|+.+..+.+..++....++..+.++++++.|+. ++.||..+|+
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~--------l~a~D~~tG~ 507 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGR--------VIAYAADTGE 507 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE--------EEEEETTTCC
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCc--------EEEEECCCCc
Confidence 37899999999999998886666555566777889999999999 5555556665
Q ss_pred eeeee
Q psy9319 177 IKKRK 181 (432)
Q Consensus 177 ~~~~~ 181 (432)
.+-.+
T Consensus 508 ~lw~~ 512 (689)
T 1yiq_A 508 KLWEQ 512 (689)
T ss_dssp EEEEE
T ss_pred cceee
Confidence 55444
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.13 E-value=8.9e-05 Score=73.94 Aligned_cols=154 Identities=11% Similarity=0.010 Sum_probs=103.7
Q ss_pred ccccCCCCcceeeeeeecC-CCceeEEEEeecCcceeeEEEccCCc---CEEEEEEcCCCCEEEEEe-------------
Q psy9319 9 LLGLNPRPSLYQSSVLTDI-SPKQLDFKFKEHHKLEEQNILKAHPV---TCICIEFDPTGKYFAVGS------------- 71 (432)
Q Consensus 9 ~l~~~p~~~~l~~s~s~D~-~~~~~~i~~~d~~~~~~~~~l~~h~~---~V~~l~~spdg~~L~sgs------------- 71 (432)
.+.+.|++ ++ +++..+. ......+.+.|..+++.+..+....+ .-..+.|+|+++.++++.
T Consensus 142 ~~~~~pdG-i~-Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 142 TVHCGPDA-IY-ISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEECSSC-EE-EEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred ceeECCCe-EE-EEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 34567888 44 4554442 12335678889999999988863322 234578899999888874
Q ss_pred ------CCCeEEEEeCCCCeeEEEEeeC-C-CCEEEEEE--eeCCCEEEEEe------CCCeEEEEeCCCCcE--EEEE-
Q psy9319 72 ------KDALVSLWDAAELTCIRTFQRL-D-WPVRAISF--SHDGALIASGS------EDLTIDIAHVESGKK--VYDI- 132 (432)
Q Consensus 72 ------~dg~I~iwd~~~~~~~~~~~~h-~-~~V~~i~~--spdg~~l~sgs------~dg~V~vwd~~~~~~--~~~~- 132 (432)
...+|.+||+.+++.+.++... . .....+.| +|++++++.++ .+++|.+|....|.. ...+
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 3679999999998888877643 1 24556656 99999888776 567888877655431 1111
Q ss_pred -ec-----------------CCceEEEEEccCCcEEEEEEC-CCeEEEEeC
Q psy9319 133 -CI-----------------QAATFTVAWHPKQYLLAYACD-DKYDRKQDC 164 (432)
Q Consensus 133 -~~-----------------~~~V~~l~fspdg~~l~s~s~-d~~I~vwd~ 164 (432)
.. ...+..+.+||||++|+++.. .+.|.+||+
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 10 234678999999999998875 456555443
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=0.00014 Score=67.42 Aligned_cols=157 Identities=6% Similarity=-0.038 Sum_probs=103.9
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcC-EEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVT-CICIEFDPTGKYFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~-V~~l~~spdg~~L~sgs~dg~I~iwd~~~ 83 (432)
.+.+.+.|+. +.++ .+.+.++. ++..|..+++.+..+ -.... .-.+++.. +.+.++.-.++.+.+||..+
T Consensus 55 ~ftqGL~~~~-~~Ly-~stG~~g~-----v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFF-ESTGHQGT-----LRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp CCEEEEEEET-TEEE-EEETTTTE-----EEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTT
T ss_pred cccceEEEEC-CEEE-EEcCCCCE-----EEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCc
Confidence 4556666763 3444 55444433 788899999888877 32221 12344432 24444555688999999999
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec---CC---ceEEEEEccCCcEEEEEECCC
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI---QA---ATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~---~~---~V~~l~fspdg~~l~s~s~d~ 157 (432)
++.+.++... .. ...+++|+..|+.+..++.|.++|..+.+.+..+.. .. .+..+.|. +|.+++..-.++
T Consensus 126 l~~~~ti~~~-~e--GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 126 PQRERTTRYS-GE--GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp TEEEEEEECS-SC--CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred CcEEEEEeCC-Cc--eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 9999888743 22 234456788888888899999999999999888852 21 34567776 675444333455
Q ss_pred eEEEEeCCceEEeecCCCceeeeec
Q psy9319 158 YDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 158 ~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
. |.+.|..+|+++..+.
T Consensus 202 ~--------I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 202 D--------VLEIDPATGTVVGVID 218 (268)
T ss_dssp E--------EEEECTTTCBEEEEEE
T ss_pred e--------EEEEeCCCCcEEEEEE
Confidence 5 7888888888877664
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.03 E-value=0.00067 Score=62.18 Aligned_cols=162 Identities=12% Similarity=0.010 Sum_probs=106.3
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCE-EEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTC-ICIEFDPTGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V-~~l~~spdg~~L~sgs~dg~I~iwd~ 81 (432)
...+.+-+.|++ +.++ .+...++. -.++..|..+++.+..+.-..... -.+++. .+++....-.++.+.+||.
T Consensus 19 ~~~ftqGL~~~~-~~Ly-estG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLY-ESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp TTCCEEEEEEET-TEEE-EEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEET
T ss_pred CccccccEEEEC-CEEE-EECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEEC
Confidence 445667788876 4455 44444332 256778899999988876433321 233333 2334444556889999999
Q ss_pred CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecC------CceEEEEEccCCcEEEEEEC
Q psy9319 82 AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQ------AATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 82 ~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~------~~V~~l~fspdg~~l~s~s~ 155 (432)
.+.+.+.++.... . ...+++++..|+.+..++.|.++|..+.+.+..+... ..+..+.|. +|..++..-.
T Consensus 93 ~tl~~~~ti~~~~-~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 93 ATLTPRARFRYPG-E--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TTTEEEEEEECSS-C--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcCcEEEEEeCCC-C--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 9999999887432 2 2344567877777778899999999999998888621 234556665 5654443334
Q ss_pred CCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 156 DKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 156 d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
+.. |.+.|..+|.++..+.
T Consensus 169 s~~--------I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 169 TSR--------IARIDPASGKVVAWID 187 (243)
T ss_dssp TTE--------EEEECTTTCBEEEEEE
T ss_pred CCe--------EEEEECCCCCEEEEEE
Confidence 445 7777888887777654
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.02 E-value=0.00021 Score=66.17 Aligned_cols=160 Identities=10% Similarity=0.051 Sum_probs=106.1
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVG-SKDALVSLWDAAE 83 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sg-s~dg~I~iwd~~~ 83 (432)
.+.+-+.|+ ++.++ .+.+.++ .-.++..|..+++.+..+.-.... ......+++..|+.. -.++.+.+||..+
T Consensus 43 ~ftqGL~~~-~~~Ly-estG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 43 AFTEGFFYR-NGYFY-ESTGLNG---RSSIRKVDIESGKTLQQIELGKRY-FGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp CEEEEEEEE-TTEEE-EEEEETT---EEEEEEECTTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred cccceEEEE-CCEEE-EECCCCC---CceEEEEECCCCcEEEEEecCCcc-ceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 455667777 45544 5544443 235778899999988887654332 222233345555544 4588999999999
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEec---C---CceEEEEEccCCcEEEEEECCC
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICI---Q---AATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~---~---~~V~~l~fspdg~~l~s~s~d~ 157 (432)
++.+.++.... ....+++|+..|+.+..++.|.++|..+.+.+..+.. . ..+..+.|. +|...+..-.++
T Consensus 117 ~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 117 LRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp CCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred CcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCC
Confidence 99998887432 2244557888787777788999999999999888762 2 224457776 676544333455
Q ss_pred eEEEEeCCceEEeecCCCceeeeec
Q psy9319 158 YDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 158 ~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
. |.+.|..+|+++..+.
T Consensus 193 ~--------I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 193 K--------IVRIDPETGKVTGIID 209 (262)
T ss_dssp E--------EEEECTTTCBEEEEEE
T ss_pred e--------EEEEECCCCcEEEEEE
Confidence 5 7777888887777664
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.98 E-value=5.9e-07 Score=88.24 Aligned_cols=141 Identities=11% Similarity=-0.036 Sum_probs=66.1
Q ss_pred cCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcC-EE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEE
Q psy9319 12 LNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVT-CI-CIEFDPTGKYFAVGSKDALVSLWDAAELTCIRT 89 (432)
Q Consensus 12 ~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~-V~-~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~ 89 (432)
+.+++..+ ++++.|+ .+..||..+|+.+..+..+... +. +..++ ++..+++|+.++.|..||..+|+.+..
T Consensus 45 ~~~~g~~~-v~~s~dg-----~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~ 117 (369)
T 2hz6_A 45 THVEEPAF-LPDPNDG-----SLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT 117 (369)
T ss_dssp -----CCE-EECTTTC-----CEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-------
T ss_pred eEcCCCEE-EEeCCCC-----EEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 33444444 4434444 3566676677776665543211 10 01111 345677888899999999999998877
Q ss_pred EeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEEEEEccCC---cEEEEEECCCeEEEEeC
Q psy9319 90 FQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQ---YLLAYACDDKYDRKQDC 164 (432)
Q Consensus 90 ~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg---~~l~s~s~d~~I~vwd~ 164 (432)
+..+. ...++|++..+++++.|+.|..||..+|+.+..+.... ....+++++. ..+++++.++.|..||.
T Consensus 118 ~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 118 LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp -------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEEC
Confidence 76543 24567788899999999999999999998776654211 1223344432 45677888999555554
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.98 E-value=0.00019 Score=71.62 Aligned_cols=143 Identities=5% Similarity=0.003 Sum_probs=99.0
Q ss_pred CCCcceeeeeeecCCCceeEEEEeecCcc----eeeEEEc------c-CCcCEEEEEEcCCCCEEEEEeCC------CeE
Q psy9319 14 PRPSLYQSSVLTDISPKQLDFKFKEHHKL----EEQNILK------A-HPVTCICIEFDPTGKYFAVGSKD------ALV 76 (432)
Q Consensus 14 p~~~~l~~s~s~D~~~~~~~i~~~d~~~~----~~~~~l~------~-h~~~V~~l~~spdg~~L~sgs~d------g~I 76 (432)
++...+++++..+..+ ++.|..+. +...++. . ....-..+..+|+| +++++..+ +.|
T Consensus 93 ~~r~~l~v~~l~s~~I-----~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRI-----YIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCE-----EEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeE-----EEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 7777777777665544 44444333 6666663 1 11234466778999 76666555 789
Q ss_pred EEEeCCCCeeEEEEeeCC---CCEEEEEEeeCCCEEEEEe-------------------CCCeEEEEeCCCCcEEEEEec
Q psy9319 77 SLWDAAELTCIRTFQRLD---WPVRAISFSHDGALIASGS-------------------EDLTIDIAHVESGKKVYDICI 134 (432)
Q Consensus 77 ~iwd~~~~~~~~~~~~h~---~~V~~i~~spdg~~l~sgs-------------------~dg~V~vwd~~~~~~~~~~~~ 134 (432)
.++|..+++.+.++.... ..-+.+.|+|+++.+++.. .+.+|.+||+.+++.+..+..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999999999988886332 2345688999999888885 368999999999988888864
Q ss_pred C---CceEEEEE--ccCCcEEEEEEC------CCeEEEE
Q psy9319 135 Q---AATFTVAW--HPKQYLLAYACD------DKYDRKQ 162 (432)
Q Consensus 135 ~---~~V~~l~f--spdg~~l~s~s~------d~~I~vw 162 (432)
. .....+.| +|+|+++++++. ++.|.+|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~ 285 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW 285 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence 3 23455655 999998887774 5565443
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.92 E-value=0.0025 Score=58.59 Aligned_cols=162 Identities=7% Similarity=-0.114 Sum_probs=91.0
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeC---CCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSK---DALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~---dg~I~iwd~ 81 (432)
.....++++|.+..+.++.... ..|.+++.........+.........++++|++..|+.+.. .+.|..+++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQL-----DRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CCccEEEEEecCCeEEEEECCC-----CEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 3445667777544443443222 23444444322221222222245689999996655554443 368888888
Q ss_pred CCCeeEEEEe-eCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE-CCCe
Q psy9319 82 AELTCIRTFQ-RLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC-DDKY 158 (432)
Q Consensus 82 ~~~~~~~~~~-~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s-~d~~ 158 (432)
... ....+. ........++++|++..|+.+. ..+.|.++|+........+........++.. +..|+.+. ..+.
T Consensus 154 dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~ 230 (267)
T 1npe_A 154 DGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNS 230 (267)
T ss_dssp TSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTE
T ss_pred CCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCe
Confidence 643 333332 2335688999999877666555 5689999999765433333333334566654 44444444 4566
Q ss_pred EEEEeCCceEEeecCCCceeeeec
Q psy9319 159 DRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 159 I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
|.+++..++..+..+.
T Consensus 231 --------v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 231 --------VIAMDLAISKEMDTFH 246 (267)
T ss_dssp --------EEEEETTTTEEEEEEC
T ss_pred --------EEEEeCCCCCceEEEc
Confidence 6666766666665543
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.89 E-value=0.00042 Score=64.58 Aligned_cols=117 Identities=9% Similarity=-0.095 Sum_probs=78.1
Q ss_pred eeeEEEccCCc--CEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCeeEEEEeeCC-CCEEEEEEeeCCCEEEEEe-CCC
Q psy9319 43 EEQNILKAHPV--TCICIEFDPTGKYFAVGSK--DALVSLWDAAELTCIRTFQRLD-WPVRAISFSHDGALIASGS-EDL 116 (432)
Q Consensus 43 ~~~~~l~~h~~--~V~~l~~spdg~~L~sgs~--dg~I~iwd~~~~~~~~~~~~h~-~~V~~i~~spdg~~l~sgs-~dg 116 (432)
+.+.++. |.. ....++|+|++.++++.+. ++.|.++|+.+++.+..+.-.. .....+++ ++..|+.+. .++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCC
Confidence 4455553 332 3578999998755555543 5799999999999888775322 12234444 455666655 578
Q ss_pred eEEEEeCCCCcEEEEEecC-CceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 117 TIDIAHVESGKKVYDICIQ-AATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 117 ~V~vwd~~~~~~~~~~~~~-~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
.+.++|..+.+.+..+... .. ...+++||..++++..++.|.++|.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~ 133 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDP 133 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECT
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEEC
Confidence 9999999999999988754 22 2345667877777666777444443
No 238
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.75 E-value=0.00018 Score=77.18 Aligned_cols=154 Identities=13% Similarity=0.062 Sum_probs=93.8
Q ss_pred ccccccC-CCCcceeeeeeecCCCceeEEEEeecCcc-eeeE-EEccCCcCEEEEEEcCCCCEEEEEeCC-----CeEEE
Q psy9319 7 IPLLGLN-PRPSLYQSSVLTDISPKQLDFKFKEHHKL-EEQN-ILKAHPVTCICIEFDPTGKYFAVGSKD-----ALVSL 78 (432)
Q Consensus 7 I~~l~~~-p~~~~l~~s~s~D~~~~~~~i~~~d~~~~-~~~~-~l~~h~~~V~~l~~spdg~~L~sgs~d-----g~I~i 78 (432)
+....|| |++..++.+...++. ....|+++|+.++ +.+. .+.. ....++|+|||+.|+..+.+ ..|.+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~-~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGN-EVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSS-SCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCC-ceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 4567899 999987544433332 3457888898887 5321 1211 13467899999888777665 26888
Q ss_pred EeCCCCee--EEEEe-eCCCCEEEEEEeeCCCEEEEEeC---CCeEEEEeCCCCc-EE--EEEe--cCCceEEEEEccCC
Q psy9319 79 WDAAELTC--IRTFQ-RLDWPVRAISFSHDGALIASGSE---DLTIDIAHVESGK-KV--YDIC--IQAATFTVAWHPKQ 147 (432)
Q Consensus 79 wd~~~~~~--~~~~~-~h~~~V~~i~~spdg~~l~sgs~---dg~V~vwd~~~~~-~~--~~~~--~~~~V~~l~fspdg 147 (432)
+++.++.. ...+. .......++.|||||++|+..+. ...|+++|+.++. .. ..+. ......++.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88877642 23333 23345678899999998887653 3468899998762 22 3332 33445666665444
Q ss_pred cEEEEEECC--C--eEEEEeC
Q psy9319 148 YLLAYACDD--K--YDRKQDC 164 (432)
Q Consensus 148 ~~l~s~s~d--~--~I~vwd~ 164 (432)
.+++.+..+ + .|..+|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEET
T ss_pred EEEEEeCCCCCCCcEEEEEcC
Confidence 444444433 2 4445554
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.71 E-value=0.00079 Score=62.30 Aligned_cols=117 Identities=8% Similarity=-0.039 Sum_probs=80.9
Q ss_pred eeEEEccCCc--CEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeE
Q psy9319 44 EQNILKAHPV--TCICIEFDPTGKYFAVGSKDA--LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTI 118 (432)
Q Consensus 44 ~~~~l~~h~~--~V~~l~~spdg~~L~sgs~dg--~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V 118 (432)
.+..+ .|.. ....+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.-. .........+++..|+... .++.+
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEE
Confidence 44455 3433 24688888 677777777776 8999999999988877643 3444444555666777666 57899
Q ss_pred EEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 119 DIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 119 ~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
.++|..+.+.+..+.....-..++ +++..|+.+..++.|.++|..
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp EEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTT
T ss_pred EEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCC
Confidence 999999999999998554333444 567777766656775555543
No 240
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.69 E-value=0.0019 Score=67.00 Aligned_cols=140 Identities=15% Similarity=0.055 Sum_probs=93.2
Q ss_pred EEEEeecCcceeeEEEcc--C--------CcCEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCeeEEEEeeCC-----
Q psy9319 33 DFKFKEHHKLEEQNILKA--H--------PVTCICIEFDPTGK---YFAVGSKDALVSLWDAAELTCIRTFQRLD----- 94 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~--h--------~~~V~~l~~spdg~---~L~sgs~dg~I~iwd~~~~~~~~~~~~h~----- 94 (432)
.+...|..+|+.+..++. | ..++. +...++|+ .++.++.+|.+.++|..+|+.+..+....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 467778889988877653 2 12222 22234674 57788999999999999998876654221
Q ss_pred --------CCE--------------------------EEEEEeeCCCEEEEEe---------------------------
Q psy9319 95 --------WPV--------------------------RAISFSHDGALIASGS--------------------------- 113 (432)
Q Consensus 95 --------~~V--------------------------~~i~~spdg~~l~sgs--------------------------- 113 (432)
.++ ..++++|+..+++..+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 2357888777776653
Q ss_pred ----------CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 114 ----------EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 114 ----------~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
.++.|..||+.+|+.+..+.....+....+...+..+++++.|+. +..+|..+|+.+-.+
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~--------l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGY--------LKALDNKDGKELWNF 501 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSE--------EEEEETTTCCEEEEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCe--------EEEEECCCCCEEEEE
Confidence 357899999999999888876555444444445667777889999 555555555555444
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.68 E-value=0.0054 Score=56.34 Aligned_cols=151 Identities=9% Similarity=-0.037 Sum_probs=89.7
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCee
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYF-AVGSKDALVSLWDAAELTC 86 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L-~sgs~dg~I~iwd~~~~~~ 86 (432)
..++++|.+..+..+.... ..|..++.........+.........++++|++..| ++....+.|.++++.....
T Consensus 39 ~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 4666777554443443222 244555554443333333333567899999975555 4555567999999874332
Q ss_pred EEEEeeCCCCEEEEEEeeCCCEEEEEeC---CCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEE-CCCeEE
Q psy9319 87 IRTFQRLDWPVRAISFSHDGALIASGSE---DLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYAC-DDKYDR 160 (432)
Q Consensus 87 ~~~~~~h~~~V~~i~~spdg~~l~sgs~---dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s-~d~~I~ 160 (432)
.............++++|++..|+.+.. .+.|..+++.... ...+. .......++|+|++..|+.+. ..+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 2222222256789999997666655553 4688888876433 22232 234578899999876665554 456755
Q ss_pred EEeC
Q psy9319 161 KQDC 164 (432)
Q Consensus 161 vwd~ 164 (432)
++|.
T Consensus 193 ~~~~ 196 (267)
T 1npe_A 193 CLNP 196 (267)
T ss_dssp EEET
T ss_pred EEec
Confidence 5554
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.64 E-value=0.00066 Score=71.85 Aligned_cols=141 Identities=9% Similarity=-0.037 Sum_probs=95.0
Q ss_pred EEEEeecCcceeeEEEcc--CC-------cCEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCeeEEEEeeCC------
Q psy9319 33 DFKFKEHHKLEEQNILKA--HP-------VTCICIEFDPTGK---YFAVGSKDALVSLWDAAELTCIRTFQRLD------ 94 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~--h~-------~~V~~l~~spdg~---~L~sgs~dg~I~iwd~~~~~~~~~~~~h~------ 94 (432)
.+..+|..+|+.+..++. |. .+.....+..+|. .++.++.+|.++++|..+|+.+..+....
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 477889999999887764 32 2333333444665 68899999999999999998874433111
Q ss_pred ------CCE------------------------EEEEEeeCCCEEEEEe-------------------------------
Q psy9319 95 ------WPV------------------------RAISFSHDGALIASGS------------------------------- 113 (432)
Q Consensus 95 ------~~V------------------------~~i~~spdg~~l~sgs------------------------------- 113 (432)
.++ ..++++|+..+++...
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 000 1267788766655421
Q ss_pred -----CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 114 -----EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 114 -----~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
.+|.|..||+.+|+.+.......++....+...+.++++++.|+. +++||..+|+.+..+
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~--------l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQ--------MHAYSADKGEALWQF 495 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSE--------EEEEETTTCCEEEEE
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCccc--------chhhhhhcChhheEe
Confidence 237899999999999988876655555555667888899999999 555555555554443
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.64 E-value=0.0025 Score=67.65 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=73.2
Q ss_pred eeEEEEeecCcceeeEEEccC-------------------------------CcCEEEEEEcCCCCEEEEEeCCCe----
Q psy9319 31 QLDFKFKEHHKLEEQNILKAH-------------------------------PVTCICIEFDPTGKYFAVGSKDAL---- 75 (432)
Q Consensus 31 ~~~i~~~d~~~~~~~~~l~~h-------------------------------~~~V~~l~~spdg~~L~sgs~dg~---- 75 (432)
...+..+|..+|+.+..+... ......++++|++..++.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 356778899999888776421 011125788998889998887763
Q ss_pred ---------------EEEEeCCCCeeEEEEee--CC-------CCEEEEEEeeCCC---EEEEEeCCCeEEEEeCCCCcE
Q psy9319 76 ---------------VSLWDAAELTCIRTFQR--LD-------WPVRAISFSHDGA---LIASGSEDLTIDIAHVESGKK 128 (432)
Q Consensus 76 ---------------I~iwd~~~~~~~~~~~~--h~-------~~V~~i~~spdg~---~l~sgs~dg~V~vwd~~~~~~ 128 (432)
|..||..+|+.+-.+.. |. .++.......+|. .++.++.+|.++++|..+|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999998877764 21 2222333334665 788899999999999999998
Q ss_pred EEEE
Q psy9319 129 VYDI 132 (432)
Q Consensus 129 ~~~~ 132 (432)
+...
T Consensus 342 l~~~ 345 (689)
T 1yiq_A 342 LSAK 345 (689)
T ss_dssp EEEE
T ss_pred eccc
Confidence 8554
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.60 E-value=0.0012 Score=61.21 Aligned_cols=117 Identities=9% Similarity=-0.019 Sum_probs=79.5
Q ss_pred eeeEEEccCC--cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEE
Q psy9319 43 EEQNILKAHP--VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTID 119 (432)
Q Consensus 43 ~~~~~l~~h~--~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~ 119 (432)
+.+..+ .|. .....+.|+. +.++.+.+.+|.|+++|+.+++.+..+ -. .........+++..|+... .++.+.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEE
Confidence 344455 343 2346888874 667778888899999999999988777 22 3333333445555555554 688999
Q ss_pred EEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 120 IAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 120 vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
++|..+.+.+..+.....-..++ +++..|+.+..++.|.++|..
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~ 163 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPD 163 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTT
T ss_pred EEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCC
Confidence 99999999999998554444454 567777777667774444443
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.59 E-value=0.00072 Score=69.65 Aligned_cols=133 Identities=11% Similarity=0.008 Sum_probs=96.7
Q ss_pred EEEEeecCcceeeEEEccC-CcCEEEEEE-c-CCCCEEEEEe------------------CCCeEEEEeCCCCeeEEEEe
Q psy9319 33 DFKFKEHHKLEEQNILKAH-PVTCICIEF-D-PTGKYFAVGS------------------KDALVSLWDAAELTCIRTFQ 91 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h-~~~V~~l~~-s-pdg~~L~sgs------------------~dg~I~iwd~~~~~~~~~~~ 91 (432)
.+.+-|..+.++...+.-- ......+++ + |++.++++++ .++.+.+.|..+.+.+.++.
T Consensus 113 rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~ 192 (595)
T 1fwx_A 113 RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL 192 (595)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence 3555677888887755421 244678887 5 9999998885 23579999999988887776
Q ss_pred eCCCCEEEEEEeeCCCEEEEEeCCC--------------------------------------eEEEEeCCC--CcE-EE
Q psy9319 92 RLDWPVRAISFSHDGALIASGSEDL--------------------------------------TIDIAHVES--GKK-VY 130 (432)
Q Consensus 92 ~h~~~V~~i~~spdg~~l~sgs~dg--------------------------------------~V~vwd~~~--~~~-~~ 130 (432)
-.. ....++++|+|.++++.+.+. .|.|.|..+ +.. +.
T Consensus 193 Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~ 271 (595)
T 1fwx_A 193 VSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTR 271 (595)
T ss_dssp ESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEE
T ss_pred eCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEE
Confidence 433 446788999999999888543 477788877 555 66
Q ss_pred EEecCCceEEEEEccCCcEEEEEE-CCCeEEEEeCCc
Q psy9319 131 DICIQAATFTVAWHPKQYLLAYAC-DDKYDRKQDCGN 166 (432)
Q Consensus 131 ~~~~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~~~ 166 (432)
.+.......++.++|||+++++++ .+.+|.++|+..
T Consensus 272 ~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 272 YIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp EEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred EEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcc
Confidence 776666778899999999877765 566766666654
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.58 E-value=0.0052 Score=58.20 Aligned_cols=151 Identities=5% Similarity=-0.162 Sum_probs=90.4
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc--------------------CCcCEEEEEEcC-C
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA--------------------HPVTCICIEFDP-T 63 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~--------------------h~~~V~~l~~sp-d 63 (432)
+....++++|++.++.+. .. ...+..++..++.. ..+.. ....+.++++++ +
T Consensus 19 ~~p~~i~~d~~g~~l~v~-~~-----~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTS-VQ-----DGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp SCCCCEECCTTCSSEEEE-CT-----TSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEE-cC-----CCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 345667888888755343 22 23455556554332 22210 013578899998 6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEEee-----CCCCEEEEEEee-CCCEEEEEeC-----------------CCeEEE
Q psy9319 64 GKYFAVGSKDALVSLWDAAELTCIRTFQR-----LDWPVRAISFSH-DGALIASGSE-----------------DLTIDI 120 (432)
Q Consensus 64 g~~L~sgs~dg~I~iwd~~~~~~~~~~~~-----h~~~V~~i~~sp-dg~~l~sgs~-----------------dg~V~v 120 (432)
|. |+.+...+.|..+|..++.. ..+.. .......+++.| +|.++++... ++.|..
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 65 44454455688899876543 22221 123578899999 9987766432 367999
Q ss_pred EeCCCCcEEEEEecCCceEEEEEccCCcEEEEE-ECCCeEEEEeC
Q psy9319 121 AHVESGKKVYDICIQAATFTVAWHPKQYLLAYA-CDDKYDRKQDC 164 (432)
Q Consensus 121 wd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~-s~d~~I~vwd~ 164 (432)
||..++..............++|+|+|.+|+.+ +..+.|..|++
T Consensus 170 ~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 170 YDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp EETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred EeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 998777654333333445679999999866655 44567544443
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.53 E-value=0.0039 Score=57.06 Aligned_cols=117 Identities=8% Similarity=-0.062 Sum_probs=79.3
Q ss_pred eeEEEccCC--cCEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeE
Q psy9319 44 EQNILKAHP--VTCICIEFDPTGKYFAVGSKDA--LVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTI 118 (432)
Q Consensus 44 ~~~~l~~h~--~~V~~l~~spdg~~L~sgs~dg--~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V 118 (432)
.+..+ .|. .....+.|++ +.++.+.+.+| .|+.+|+.+++.+..+.-. .........+++..|+... .++.+
T Consensus 11 v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEE
Confidence 34444 444 3466888987 56666666654 8999999999988877633 2333344445556666555 58899
Q ss_pred EEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 119 DIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 119 ~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
.++|..+.+.+.++.....-..++ +++..|+.+..++.|.++|..
T Consensus 88 ~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTT
T ss_pred EEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCC
Confidence 999999999999998655445555 567666666667775555543
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.47 E-value=0.0015 Score=69.24 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=61.1
Q ss_pred CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCce--EEEEEccCCcEEE
Q psy9319 74 ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAAT--FTVAWHPKQYLLA 151 (432)
Q Consensus 74 g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V--~~l~fspdg~~l~ 151 (432)
+.|..||+.+++.+-.+. +..++.+..++.++.+++.++.||.+++||..+|+.+..+.....+ .-+.|.++|+.++
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 789999999999887776 4445556667788889999999999999999999999998744332 3366778886554
Q ss_pred EE
Q psy9319 152 YA 153 (432)
Q Consensus 152 s~ 153 (432)
..
T Consensus 536 ~~ 537 (677)
T 1kb0_A 536 SV 537 (677)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.004 Score=62.12 Aligned_cols=149 Identities=7% Similarity=0.007 Sum_probs=87.6
Q ss_pred cccccccCCC-CcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeC-CC----eEEEE
Q psy9319 6 FIPLLGLNPR-PSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSK-DA----LVSLW 79 (432)
Q Consensus 6 ~I~~l~~~p~-~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~-dg----~I~iw 79 (432)
....++++|. ...+.++-.. ..|..+|...+... .+.........++|+++|..|+.+.. .+ .+.++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~------~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ------HPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT------EEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCC------CcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 3456777762 3333233211 45666676655433 33334556789999999996665554 22 34444
Q ss_pred eCCCCeeE--EEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEE
Q psy9319 80 DAAELTCI--RTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 80 d~~~~~~~--~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s 154 (432)
+.. +... ..+.. ......++++| +|.++++-..++.|..++..++....... .......++|+|+|++|+.+.
T Consensus 211 ~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 211 TRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp EGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred eCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 433 2221 22322 23456788999 67766666678899999998765433332 224477899999999655554
Q ss_pred -CCCeEEEEe
Q psy9319 155 -DDKYDRKQD 163 (432)
Q Consensus 155 -~d~~I~vwd 163 (432)
..+.|..++
T Consensus 289 ~~~~~I~~~~ 298 (430)
T 3tc9_A 289 VNQHYILRSD 298 (430)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEe
Confidence 556644443
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.37 E-value=0.002 Score=60.62 Aligned_cols=132 Identities=15% Similarity=0.066 Sum_probs=89.1
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG 112 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg 112 (432)
.+..+|.. ++....+..+...+.++...++|. +..++.++.|..||.. +.....+......+.++.+.+++.+++ +
T Consensus 118 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~ 193 (330)
T 3hxj_A 118 HLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-G 193 (330)
T ss_dssp EEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-E
T ss_pred EEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-E
Confidence 34555665 666655555555566677777776 5567778999999998 777766665556677777777877554 4
Q ss_pred eCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeec
Q psy9319 113 SEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGF 172 (432)
Q Consensus 113 s~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~ 172 (432)
+ +.|..+| .++..+.... ....+.++..+++|.+. .++.++.|..+|...-.+|..
T Consensus 194 t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 194 S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECTTSCEEEEE
T ss_pred e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECCCCCEeEEe
Confidence 4 7799999 7777776665 34557788888887644 466677765555433344443
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.36 E-value=0.0026 Score=59.82 Aligned_cols=123 Identities=15% Similarity=0.068 Sum_probs=81.6
Q ss_pred EEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE
Q psy9319 33 DFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG 112 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg 112 (432)
.+..++.. +.....+......+.++.+.++|.+++ ++ +.|..+| .++.....+......+.++...++|. |..+
T Consensus 158 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~ 231 (330)
T 3hxj_A 158 YLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVT 231 (330)
T ss_dssp EEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEE
T ss_pred EEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEE
Confidence 45666766 666666665556677777878887554 44 7899999 67777666665556688888888876 4556
Q ss_pred eCCCeEEEEeCCCCcEEEEEecC-CceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 113 SEDLTIDIAHVESGKKVYDICIQ-AATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 113 s~dg~V~vwd~~~~~~~~~~~~~-~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
+.++.|..+|. ++..+..+... ..+.++.+.+++. |+.++.++.|..+|
T Consensus 232 t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 232 SLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp ETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred cCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 66778888884 66666666533 3344566666665 55577777744444
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.33 E-value=0.016 Score=60.02 Aligned_cols=141 Identities=15% Similarity=0.131 Sum_probs=90.6
Q ss_pred eEEEEeecCcceeeEEEcc--CC--------cCEEEEEEc-CCCC---EEEEEeCCCeEEEEeCCCCeeEEEEeeCC---
Q psy9319 32 LDFKFKEHHKLEEQNILKA--HP--------VTCICIEFD-PTGK---YFAVGSKDALVSLWDAAELTCIRTFQRLD--- 94 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~--h~--------~~V~~l~~s-pdg~---~L~sgs~dg~I~iwd~~~~~~~~~~~~h~--- 94 (432)
..+..+|..+|+.+..++. |. .++. +... .+|+ .++.++.+|.++++|..+|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 4577789999999887753 32 2222 2222 4674 78889999999999999998876654321
Q ss_pred ----------CCE--------------------------------EEEEEeeCCCEEEEEe-------------------
Q psy9319 95 ----------WPV--------------------------------RAISFSHDGALIASGS------------------- 113 (432)
Q Consensus 95 ----------~~V--------------------------------~~i~~spdg~~l~sgs------------------- 113 (432)
.++ ..++++|+..++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 1245666544444332
Q ss_pred --------------CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceee
Q psy9319 114 --------------EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKK 179 (432)
Q Consensus 114 --------------~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~ 179 (432)
.+|.|..||+.+|+.+.......++..-.....+.++++++.|+. ++.||..+|+.+-
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~--------l~A~D~~tG~~lW 521 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGY--------FKAFDAKSGKELW 521 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSE--------EEEEETTTCCEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCc--------EEEEECCCCCEEE
Confidence 258899999999999888875544433222334667888999999 5555555555554
Q ss_pred ee
Q psy9319 180 RK 181 (432)
Q Consensus 180 ~~ 181 (432)
.+
T Consensus 522 ~~ 523 (582)
T 1flg_A 522 KF 523 (582)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.31 E-value=0.021 Score=52.58 Aligned_cols=153 Identities=10% Similarity=0.076 Sum_probs=91.2
Q ss_pred CCCC-CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc-cCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy9319 1 MEGQ-NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK-AHPVTCICIEFDPTGKYFAVGSKDALVSL 78 (432)
Q Consensus 1 ~~g~-n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~-~h~~~V~~l~~spdg~~L~sgs~dg~I~i 78 (432)
|||. +.+..++++|++..+.+. .+ . ...|...|.. ++.+..+. +.....-.+++.+++.++++.-.++.+.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV-~d-~---~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFST-IN-K---PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEE-EE-T---TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEE-EC-C---CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 3455 457889999987655332 22 2 2334455665 77777764 22356788899998887777656788999
Q ss_pred EeCCCCee---EEEEe------eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC---CCcEEEEEe--------cCCce
Q psy9319 79 WDAAELTC---IRTFQ------RLDWPVRAISFSHDGALIASGSEDLTIDIAHVE---SGKKVYDIC--------IQAAT 138 (432)
Q Consensus 79 wd~~~~~~---~~~~~------~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~---~~~~~~~~~--------~~~~V 138 (432)
+++..... +.... ........++|+|.+..|+++.......+|.+. .+..+..+. ....+
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 98764332 22221 123456899999988777777654444444432 122222221 22347
Q ss_pred EEEEEccCCc-EEEEEECCCeE
Q psy9319 139 FTVAWHPKQY-LLAYACDDKYD 159 (432)
Q Consensus 139 ~~l~fspdg~-~l~s~s~d~~I 159 (432)
.+++++|... +++.+..+..+
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L 197 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRAL 197 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEE
T ss_pred eeEEEcCCCCeEEEEECCCCeE
Confidence 8899999654 45555555553
No 254
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.30 E-value=0.009 Score=57.64 Aligned_cols=127 Identities=9% Similarity=-0.024 Sum_probs=80.9
Q ss_pred EEEEeecCcceeeEEEccC---------CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEe
Q psy9319 33 DFKFKEHHKLEEQNILKAH---------PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFS 103 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h---------~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~s 103 (432)
.+..+|..+++.+...... ...+.+. ...++..++.++.++.|..+|..+|+.+-.+............
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~- 141 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV- 141 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-
Confidence 5667788888887665542 1223222 1224567888889999999999999887666543322111222
Q ss_pred eCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceE------EEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 104 HDGALIASGSEDLTIDIAHVESGKKVYDICIQAATF------TVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 104 pdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~------~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
.+..++.++.++.|..+|..+|+.+........+. ..... +..+++++.++.+..+|.
T Consensus 142 -~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 142 -SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp -ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred -ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 24578888899999999999999988876443332 22222 345677777888444444
No 255
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.28 E-value=0.016 Score=55.33 Aligned_cols=152 Identities=10% Similarity=0.064 Sum_probs=100.4
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEE-Ecc----CC--cCEEEEEE---cCCCCEEEEEe------
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNI-LKA----HP--VTCICIEF---DPTGKYFAVGS------ 71 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~-l~~----h~--~~V~~l~~---spdg~~L~sgs------ 71 (432)
.+..|++....+.++.... ..|..|+...+..... +.+ .. ..+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~-----g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYK-----GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp SCEEEETTTTEEEEEETTT-----TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cCccCcCCCCEEEEEeccC-----CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 6677887666665664333 4556667654433322 222 11 13679999 68888877543
Q ss_pred -------CCCeEEEEeCC---CCeeEEEEe--eC-----------CCCEEEEEEeeCCCEEEEEeCC-CeEEEEeCCCCc
Q psy9319 72 -------KDALVSLWDAA---ELTCIRTFQ--RL-----------DWPVRAISFSHDGALIASGSED-LTIDIAHVESGK 127 (432)
Q Consensus 72 -------~dg~I~iwd~~---~~~~~~~~~--~h-----------~~~V~~i~~spdg~~l~sgs~d-g~V~vwd~~~~~ 127 (432)
.+..|..||+. +++.+.... .. ......++..++|+..++++.. +.|...+.....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE
Confidence 25779999999 777655443 11 1248899999999999999888 888888876443
Q ss_pred EEEEEe--c-----CCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 128 KVYDIC--I-----QAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 128 ~~~~~~--~-----~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
+..+. . ......|+++|+|..|++....+.+.-+|+.
T Consensus 171 -~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 -VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp -EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred -EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 33221 1 1225689999999988888778886666654
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.26 E-value=0.014 Score=55.09 Aligned_cols=154 Identities=13% Similarity=-0.031 Sum_probs=91.5
Q ss_pred CcccccccCC-CCcceeeeeeecC-----------CCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEE-e
Q psy9319 5 NFIPLLGLNP-RPSLYQSSVLTDI-----------SPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVG-S 71 (432)
Q Consensus 5 n~I~~l~~~p-~~~~l~~s~s~D~-----------~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sg-s 71 (432)
+....+.+.| ++.++++...... ......+..++..++.......+ ......++|+|+|..|+.+ +
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEF 204 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEG
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeC
Confidence 3456788888 8876644322100 01124566667655544322222 1234578999999866555 5
Q ss_pred CCCeEEEEeCCCCe--eEEEEeeCCCCEEEEEEeeCCCEEEEEeC----------CCeEEEEeCCCCcEEEEEecC----
Q psy9319 72 KDALVSLWDAAELT--CIRTFQRLDWPVRAISFSHDGALIASGSE----------DLTIDIAHVESGKKVYDICIQ---- 135 (432)
Q Consensus 72 ~dg~I~iwd~~~~~--~~~~~~~h~~~V~~i~~spdg~~l~sgs~----------dg~V~vwd~~~~~~~~~~~~~---- 135 (432)
..+.|.+|++.... ....+....+ ...+++.++|.++++... .+.|..+|. .++.+..+...
T Consensus 205 ~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~ 282 (322)
T 2fp8_A 205 LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFA 282 (322)
T ss_dssp GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTT
T ss_pred CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCc
Confidence 56899999987421 1222222233 788999999987766544 467888887 47777766532
Q ss_pred -CceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 136 -AATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 136 -~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
..+.++++ .++.++++....+.|..+
T Consensus 283 ~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 283 GEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp TSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred cccceEEEE-eCCEEEEeecCCCceEEE
Confidence 34666666 466666655566673333
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.22 E-value=0.018 Score=59.93 Aligned_cols=131 Identities=17% Similarity=0.137 Sum_probs=84.7
Q ss_pred EEEEeecCcceeeEEEccCC----------cCEEEEEEc-CCC---CEEEEEeCCCeEEEEeCCCCeeEEEEeeCC----
Q psy9319 33 DFKFKEHHKLEEQNILKAHP----------VTCICIEFD-PTG---KYFAVGSKDALVSLWDAAELTCIRTFQRLD---- 94 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h~----------~~V~~l~~s-pdg---~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~---- 94 (432)
.+..+|..+|+....++... .++. +... .+| ..++.++.+|.+.++|..+|+.+.......
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 357 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNV 357 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccc
Confidence 56777888998887766422 2222 2222 567 567888999999999999998876554110
Q ss_pred ---------CCE--------------------------EEEEEeeCCCEEEEEe--------------------------
Q psy9319 95 ---------WPV--------------------------RAISFSHDGALIASGS-------------------------- 113 (432)
Q Consensus 95 ---------~~V--------------------------~~i~~spdg~~l~sgs-------------------------- 113 (432)
.++ ..++++|+..++++..
T Consensus 358 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 437 (599)
T 1w6s_A 358 FKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLN 437 (599)
T ss_dssp EEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccce
Confidence 111 1356677655554421
Q ss_pred -------------CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 114 -------------EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 114 -------------~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
.+|.|..||+.+|+.+.......++..-.....+.+++.++.|+.++.||.
T Consensus 438 ~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~ 501 (599)
T 1w6s_A 438 MYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDS 501 (599)
T ss_dssp EEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred eccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEEC
Confidence 347899999999999888865444332223335677777999999444444
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.16 E-value=0.06 Score=50.93 Aligned_cols=111 Identities=12% Similarity=-0.044 Sum_probs=71.5
Q ss_pred cCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC-C-CeEEEEeCCCCcEE
Q psy9319 53 VTCICIEFDPTG-KYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSE-D-LTIDIAHVESGKKV 129 (432)
Q Consensus 53 ~~V~~l~~spdg-~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~-d-g~V~vwd~~~~~~~ 129 (432)
.....+++++.+ .++++-...+.|.++++........+.........++++|.+..|+.+.. . +.|...++... ..
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~ 155 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DI 155 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-Ce
Confidence 345788998755 44455566789999998754433333334456889999997666655553 3 68888888543 33
Q ss_pred EEEe--cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 130 YDIC--IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 130 ~~~~--~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
..+. .-.....++|+|++..|+.+. ..+.|..+|+
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 3332 234577899998776666554 4456555554
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.10 E-value=0.039 Score=53.15 Aligned_cols=112 Identities=7% Similarity=-0.102 Sum_probs=71.1
Q ss_pred cCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CC-CeEEEEeCCCCcEE
Q psy9319 53 VTCICIEFDPTG-KYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-ED-LTIDIAHVESGKKV 129 (432)
Q Consensus 53 ~~V~~l~~spdg-~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~d-g~V~vwd~~~~~~~ 129 (432)
.....+++++.+ .++++-...+.|.+.++........+...-.....++++|.+..|+... .. +.|...++......
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 195 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 345678898854 4455556678999999875443333333445688999999666555544 44 78999988654333
Q ss_pred EEEe-cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 130 YDIC-IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 130 ~~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
..+. .-.....++|+|++..|+.+. ..+.|..+|+
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 2222 234467899998776666554 4556555543
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.09 E-value=0.015 Score=62.30 Aligned_cols=148 Identities=12% Similarity=0.017 Sum_probs=85.1
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCccee--eEEEc-cCCcCEEEEEEcCCCCEEEEEeC---CCeEEEEeC
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNILK-AHPVTCICIEFDPTGKYFAVGSK---DALVSLWDA 81 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l~-~h~~~V~~l~~spdg~~L~sgs~---dg~I~iwd~ 81 (432)
..+.|+|++..++.+ +.|.......|.++++.++.. ...+. .+......+.|||||++|+..+. ...|.++|+
T Consensus 224 ~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp SCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred eeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 467899999877444 445444445677777766542 23333 23345678899999998876653 346888998
Q ss_pred CCCe-eE--EEEe-eCCCCEEEEEEeeCCCEEEEEe-CC----CeEEEEeCCCC-cEEE-EEecCCc--eEEEEEccCCc
Q psy9319 82 AELT-CI--RTFQ-RLDWPVRAISFSHDGALIASGS-ED----LTIDIAHVESG-KKVY-DICIQAA--TFTVAWHPKQY 148 (432)
Q Consensus 82 ~~~~-~~--~~~~-~h~~~V~~i~~spdg~~l~sgs-~d----g~V~vwd~~~~-~~~~-~~~~~~~--V~~l~fspdg~ 148 (432)
.++. .. ..+. ...+...++.|+. |..|+..+ .+ ..|..+|+.++ .... .+.+... +..+.+. .+.
T Consensus 303 ~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~ 380 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNY 380 (751)
T ss_dssp SSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSE
T ss_pred CCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCE
Confidence 8652 12 3333 3344555665543 55554443 33 36788888653 2222 3444333 4445554 234
Q ss_pred EEEEEECCCe
Q psy9319 149 LLAYACDDKY 158 (432)
Q Consensus 149 ~l~s~s~d~~ 158 (432)
++++...++.
T Consensus 381 lv~~~~~~g~ 390 (751)
T 2xe4_A 381 LVVAGRRAGL 390 (751)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEeCCE
Confidence 5555666665
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.07 E-value=0.046 Score=53.40 Aligned_cols=131 Identities=6% Similarity=-0.097 Sum_probs=77.9
Q ss_pred EEEeecCcceeeEEEccCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE
Q psy9319 34 FKFKEHHKLEEQNILKAHPVTCICIEFDPTG-KYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG 112 (432)
Q Consensus 34 i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg-~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg 112 (432)
|..++.........+.........+++++.+ .++++-...+.|.+.++........+...-.....+++.|.+..|+.+
T Consensus 140 I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 140 ILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp EEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEe
Confidence 4444444333223333323344678888754 444555667789999987544333344344568999999976666655
Q ss_pred e-CC-CeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 113 S-ED-LTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 113 s-~d-g~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
. .. +.|...++.......... .......++|+|++..|+.+. ..+.|..+|+
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 4 44 789999886544333332 334478899998766666554 4556444443
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.03 E-value=0.047 Score=51.17 Aligned_cols=120 Identities=10% Similarity=0.016 Sum_probs=76.4
Q ss_pred eeeEEEccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC--CeEEE
Q psy9319 43 EEQNILKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSED--LTIDI 120 (432)
Q Consensus 43 ~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d--g~V~v 120 (432)
+.+..+... .....++|+|+|.++++....+.|..||.... ....+ .....+.+++++|+|+++++.... ..|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 444455433 45678999999997777778899999998753 33333 234578899999999966655433 24777
Q ss_pred EeCCCCcEEEEEec--CCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 121 AHVESGKKVYDICI--QAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 121 wd~~~~~~~~~~~~--~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
+|..+++....... ......++..+++..+++...++.|.++|..
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 78778775433322 2223445555555555554457776666653
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.01 E-value=0.015 Score=58.08 Aligned_cols=150 Identities=13% Similarity=0.162 Sum_probs=86.0
Q ss_pred CcccccccCCC---CcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC---C-eEE
Q psy9319 5 NFIPLLGLNPR---PSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD---A-LVS 77 (432)
Q Consensus 5 n~I~~l~~~p~---~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d---g-~I~ 77 (432)
+.-..++++|+ +.++++.. . ..|+.++..++... .+-+......+++|+++|.++++.... . .+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~-~------~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQ-R------DAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECB-T------SCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred CCCceEEEccccCCCEEEEEeC-C------CCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEE
Confidence 34467788884 55543221 1 34556666555544 333444568899999999944444311 1 233
Q ss_pred EEeCCCCee-EEEEeeCCCCEEEEEEee-CCCEEEEEeCCCeEEEEeCCCCcEEEEE-e--cCCceEEEEEccCCcEEEE
Q psy9319 78 LWDAAELTC-IRTFQRLDWPVRAISFSH-DGALIASGSEDLTIDIAHVESGKKVYDI-C--IQAATFTVAWHPKQYLLAY 152 (432)
Q Consensus 78 iwd~~~~~~-~~~~~~h~~~V~~i~~sp-dg~~l~sgs~dg~V~vwd~~~~~~~~~~-~--~~~~V~~l~fspdg~~l~s 152 (432)
.++...+.. ...+. .......++++| +|.++++-..++.|+.+|..++.....+ . .......++|+|+|..|+.
T Consensus 211 ~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 211 LFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp EECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred EEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 333322111 11222 234456788999 6766656567889999999878763333 2 2222346999999986655
Q ss_pred EE-CCCeEEEEe
Q psy9319 153 AC-DDKYDRKQD 163 (432)
Q Consensus 153 ~s-~d~~I~vwd 163 (432)
+. ..+.|+.++
T Consensus 290 ad~~~~~I~~~~ 301 (433)
T 4hw6_A 290 IYNGKHCIYRVD 301 (433)
T ss_dssp EETTTTEEEEEE
T ss_pred EeCCCCEEEEEe
Confidence 54 456644433
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.01 E-value=0.12 Score=50.79 Aligned_cols=117 Identities=10% Similarity=-0.096 Sum_probs=76.9
Q ss_pred EccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCC
Q psy9319 48 LKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSE--DLTIDIAHVE 124 (432)
Q Consensus 48 l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~ 124 (432)
+.........+++.+ .+.++++-...+.|.+.++........+.........+++.|.+..|+.... .+.|...++.
T Consensus 154 ~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 154 ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 333445677899998 4555556566789999999865544444434456899999997666665552 3789999986
Q ss_pred CCcEEEEEe-cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 125 SGKKVYDIC-IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 125 ~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
.......+. .-.....|+++|++..|+.+. ..+.|..+|+
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 544433333 235678899998777776664 4456554444
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.84 E-value=0.15 Score=49.65 Aligned_cols=124 Identities=7% Similarity=-0.077 Sum_probs=74.3
Q ss_pred ccCCcCEEEEEEcCCCCEEEEE-eCC-CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCC
Q psy9319 49 KAHPVTCICIEFDPTGKYFAVG-SKD-ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVES 125 (432)
Q Consensus 49 ~~h~~~V~~l~~spdg~~L~sg-s~d-g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~ 125 (432)
.........++++|.+..|+.+ ... +.|..+++............-.....++|+|++..|+.+. ..+.|..+|+..
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 3334567899999966555444 344 6888888874433333333345678999998777666654 567899999875
Q ss_pred CcEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 126 GKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 126 ~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
......+. .......+++ ..+.++++-...+. |..++..+|..+..+
T Consensus 278 ~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~--------V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 278 SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS--------INSANKFTGKNQEII 325 (386)
T ss_dssp CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE--------EEEEETTTCCSCEEE
T ss_pred CeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe--------EEEEECCCCcceEEE
Confidence 44333332 2334567777 34455555555566 444554444444433
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.81 E-value=0.058 Score=57.83 Aligned_cols=107 Identities=11% Similarity=-0.006 Sum_probs=73.2
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe-----eCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 52 PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ-----RLDWPVRAISFSHDGALIASGSEDLTIDIAHVESG 126 (432)
Q Consensus 52 ~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~-----~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~ 126 (432)
...|.+++..++|..|..|+.++-|.+||..++... .+. .....|.++...++|.+++.. .+ -|.+||..++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQR 481 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTT
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCC
Confidence 357899999888885667787778999999877643 332 124579999988888866554 34 4889998877
Q ss_pred cEEEEEe-------cCCceEEEEEccCCcEEEEEECCCeEEEEe
Q psy9319 127 KKVYDIC-------IQAATFTVAWHPKQYLLAYACDDKYDRKQD 163 (432)
Q Consensus 127 ~~~~~~~-------~~~~V~~l~fspdg~~l~s~s~d~~I~vwd 163 (432)
....... ....|.++..+++|.+.+.+ ..| +..||
T Consensus 482 ~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~G-l~~~~ 523 (795)
T 4a2l_A 482 SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-EEG-LSVFK 523 (795)
T ss_dssp EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-SSC-EEEEE
T ss_pred eEEEccccccccccCCceEEEEEECCCCCEEEEe-CCc-eEEEe
Confidence 5433221 12568899999988866644 444 34443
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.80 E-value=0.052 Score=49.95 Aligned_cols=111 Identities=11% Similarity=0.096 Sum_probs=79.3
Q ss_pred EEccCCcCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCeeEEEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q psy9319 47 ILKAHPVTCICIEFDPTGKYFA-VGSKDALVSLWDAAELTCIRTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVE 124 (432)
Q Consensus 47 ~l~~h~~~V~~l~~spdg~~L~-sgs~dg~I~iwd~~~~~~~~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~ 124 (432)
.+.+-...+..++|+|++..|+ +...++.|...|+. +..+..+.- .......|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4566667899999999766554 56778889999998 777776642 23568889999988877766677889999876
Q ss_pred CCcE---EEEEe-------cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 125 SGKK---VYDIC-------IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 125 ~~~~---~~~~~-------~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
.... +.... .......++|+|.+..|+++.....
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p 143 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP 143 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC
Confidence 5442 22221 2233689999999877777665544
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.71 E-value=0.22 Score=47.76 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=65.9
Q ss_pred cCCcCEEEEEEcCCCCEE-EEEeCC-CeEEEEeCCCCeeEEEE-eeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCC
Q psy9319 50 AHPVTCICIEFDPTGKYF-AVGSKD-ALVSLWDAAELTCIRTF-QRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVES 125 (432)
Q Consensus 50 ~h~~~V~~l~~spdg~~L-~sgs~d-g~I~iwd~~~~~~~~~~-~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~ 125 (432)
........++++|.+..| ++-... +.|..+++.... ...+ ...-.....++|+|++..|+.+. ..+.|..+|+..
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 334557899999955544 444444 789889887433 3333 22344678999999777666665 567899999875
Q ss_pred CcEEEEEe-cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 126 GKKVYDIC-IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 126 ~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
......+. .......+++ ..+.++++-...+.
T Consensus 235 ~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~ 267 (349)
T 3v64_C 235 SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS 267 (349)
T ss_dssp CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CceEEEEeCCCCCceEEEE-ECCEEEEecCCCCe
Confidence 44333332 2334566777 34455554445555
No 269
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.67 E-value=0.032 Score=53.73 Aligned_cols=99 Identities=10% Similarity=0.084 Sum_probs=68.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeeEEEEeeC---------CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe
Q psy9319 63 TGKYFAVGSKDALVSLWDAAELTCIRTFQRL---------DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 63 dg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h---------~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~ 133 (432)
++..++.++.++.|..+|..+|+.+-.+... ...+.+ ....++..++.++.++.|..+|..+|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 3567888888999999999999887666532 122322 222356678888999999999999999988776
Q ss_pred cCCceEE-EEEccCCcEEEEEECCCeEEEEeC
Q psy9319 134 IQAATFT-VAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 134 ~~~~V~~-l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
....+.+ .... +..+++++.++.|..+|.
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~ 160 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNE 160 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEET
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEEC
Confidence 4433322 2222 346777888888666665
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.66 E-value=0.14 Score=47.77 Aligned_cols=149 Identities=11% Similarity=0.007 Sum_probs=82.7
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC--CeEEEEeCC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD--ALVSLWDAA 82 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d--g~I~iwd~~ 82 (432)
.....++|+|++.++ ++... ...|..++... .....+. ....+.+++++++|+++++.... ..|..+|..
T Consensus 32 ~~pegia~~~~g~ly-v~d~~-----~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIF-VTNHE-----VGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEE-EEETT-----TTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEE-EEeCC-----CCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 445677888888755 43222 22355556543 3333332 23467899999999976665433 247777877
Q ss_pred CCeeEEEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE-EEEEe----------cCCceEEEEEccCCcEE
Q psy9319 83 ELTCIRTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK-VYDIC----------IQAATFTVAWHPKQYLL 150 (432)
Q Consensus 83 ~~~~~~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~-~~~~~----------~~~~V~~l~fspdg~~l 150 (432)
++........ .......++..+++..+++.+.++.|+++|..++.. +.... .......+ +|++..|
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 7765332221 223345555555555455544688999999876532 22111 11123445 7888766
Q ss_pred EEEE-CCCeEEEEe
Q psy9319 151 AYAC-DDKYDRKQD 163 (432)
Q Consensus 151 ~s~s-~d~~I~vwd 163 (432)
+.+. ..+.|..||
T Consensus 182 yv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 182 YVSNTEKMLLLRIP 195 (306)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 5554 455644443
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.57 E-value=0.16 Score=54.37 Aligned_cols=111 Identities=13% Similarity=0.088 Sum_probs=76.6
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEee--------CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeC
Q psy9319 52 PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQR--------LDWPVRAISFSHDGALIASGSEDLTIDIAHV 123 (432)
Q Consensus 52 ~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~--------h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~ 123 (432)
...|.++...++|.+ ..|+.++-|..||..++........ ....|.++...++|..|..|+.++-|.++|.
T Consensus 356 ~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 356999999888874 4577777799999887654332211 1357999998888885666777777999999
Q ss_pred CCCcEEEEEe-----cCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 124 ESGKKVYDIC-----IQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 124 ~~~~~~~~~~-----~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
.++....... ....|.++..+++|.+.+.+ .+| +.+||..
T Consensus 435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~ 479 (795)
T 4a2l_A 435 NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPE 479 (795)
T ss_dssp TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETT
T ss_pred CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCC
Confidence 8876543321 23468999998888866544 444 5666653
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.49 E-value=0.58 Score=43.99 Aligned_cols=110 Identities=11% Similarity=-0.054 Sum_probs=67.4
Q ss_pred CCcCEEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCeeEEEE-eeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCC
Q psy9319 51 HPVTCICIEFDPTGKYFAVGSK-D-ALVSLWDAAELTCIRTF-QRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESG 126 (432)
Q Consensus 51 h~~~V~~l~~spdg~~L~sgs~-d-g~I~iwd~~~~~~~~~~-~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~ 126 (432)
.......++++|.+..|+.+.. . +.|..+++.. .....+ ...-.....++|+|++..|+.+. ..+.|..+|+...
T Consensus 118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 3456789999996655544443 3 6888888863 333333 22345688999999877776665 5678999998754
Q ss_pred cEEEEEec---CCceEEEEEccCCcEEEEEECCCeEEEE
Q psy9319 127 KKVYDICI---QAATFTVAWHPKQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 127 ~~~~~~~~---~~~V~~l~fspdg~~l~s~s~d~~I~vw 162 (432)
........ ......+++. .+.++++-...+.|..+
T Consensus 197 ~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 197 NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSA 234 (316)
T ss_dssp SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEE
Confidence 33222221 2345677774 35555555555663333
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.47 E-value=0.046 Score=54.40 Aligned_cols=118 Identities=11% Similarity=-0.039 Sum_probs=68.8
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee-eEEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeC
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE-QNILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~-~~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~ 81 (432)
.+....++++|++.++ ++...........+.+ +...+.. ...+. .......++++| +|.++++-..++.|+.+|.
T Consensus 181 ~~~P~giavd~dG~ly-Vad~~~~~~~~gv~~~-~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMV-VVDDQSSDTNTGIYLF-TRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CSCEEEEEECTTCCEE-EEECCSCTTSEEEEEE-CGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred CCCccEEEECCCCCEE-EEcCCCCcccceEEEE-ECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 3456778899998844 5433222222222222 2111111 11222 123345688999 7776666667789999999
Q ss_pred CCCeeEEEEee--CCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCC
Q psy9319 82 AELTCIRTFQR--LDWPVRAISFSHDGALIASGS-EDLTIDIAHVE 124 (432)
Q Consensus 82 ~~~~~~~~~~~--h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~ 124 (432)
.++.....+.. .......++|+|++.+|+.+. ..+.|..+++.
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 87765333322 122345799999999665554 57889998865
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.43 E-value=0.1 Score=52.74 Aligned_cols=148 Identities=12% Similarity=0.108 Sum_probs=85.9
Q ss_pred cccccCCC-CcceeeeeeecCCCceeEEEEeecCcceeeEEEccC---CcCEEEEEE-------cCCCCEEEEEeCCC--
Q psy9319 8 PLLGLNPR-PSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAH---PVTCICIEF-------DPTGKYFAVGSKDA-- 74 (432)
Q Consensus 8 ~~l~~~p~-~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h---~~~V~~l~~-------spdg~~L~sgs~dg-- 74 (432)
..++++|. +..++++. .. ...+++.|..++.....+... ......++| +++|..|+++...+
T Consensus 142 ~~la~dp~~~~~Lyv~~-~~----~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICY-DG----HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp EEEEEETTEEEEEEEEE-ET----EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CEEEEccCCCCEEEEEE-CC----CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 56778883 44343332 11 234666666665554444332 234789999 99999666665543
Q ss_pred -----eEEEEeCCC-CeeE-----EEEeeCCCCEEEEEEeeC-CCEEEEEeCCCeEEEEeCC-------CCcE-------
Q psy9319 75 -----LVSLWDAAE-LTCI-----RTFQRLDWPVRAISFSHD-GALIASGSEDLTIDIAHVE-------SGKK------- 128 (432)
Q Consensus 75 -----~I~iwd~~~-~~~~-----~~~~~h~~~V~~i~~spd-g~~l~sgs~dg~V~vwd~~-------~~~~------- 128 (432)
.|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 366675443 2211 222221 23456788994 5555555678899999987 5543
Q ss_pred -------EEEEecCCceEEEEEccCCcEEEEEE-CCCeEEE
Q psy9319 129 -------VYDICIQAATFTVAWHPKQYLLAYAC-DDKYDRK 161 (432)
Q Consensus 129 -------~~~~~~~~~V~~l~fspdg~~l~s~s-~d~~I~v 161 (432)
+.........+.++|+|+|.+|+.+. ..+.|+.
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 22222334567899999999655554 4556444
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.43 E-value=0.12 Score=49.76 Aligned_cols=128 Identities=14% Similarity=0.080 Sum_probs=87.3
Q ss_pred eEEEEeecCcceeeEEEccCCcCEEEEEEcCC----CCE--E--EEEeC--CCeEEEEeC--CCCeeEEEEee------C
Q psy9319 32 LDFKFKEHHKLEEQNILKAHPVTCICIEFDPT----GKY--F--AVGSK--DALVSLWDA--AELTCIRTFQR------L 93 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spd----g~~--L--~sgs~--dg~I~iwd~--~~~~~~~~~~~------h 93 (432)
.-+.++|. +|+.++.+.. +.+..+..-|+ |.. + ++.-. +++|++|++ .++. +..+.. .
T Consensus 50 ~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t 125 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIAT 125 (355)
T ss_dssp TEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEEC
T ss_pred CCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCC
Confidence 46788898 8888888865 55666666652 322 2 33333 578999966 3433 333311 1
Q ss_pred C-CCEEEEEE--eeC-CC-EEEEEeCCCeEEEEeCC-------CCcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEE
Q psy9319 94 D-WPVRAISF--SHD-GA-LIASGSEDLTIDIAHVE-------SGKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRK 161 (432)
Q Consensus 94 ~-~~V~~i~~--spd-g~-~l~sgs~dg~V~vwd~~-------~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~v 161 (432)
. ..+..+++ +|. +. +++....+|.+..|++. +++.+..+...+.+..|..++....|+.+-.+..|..
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEE
Confidence 2 45667777 674 44 57777788999999883 3355777778889999999998889999999876544
Q ss_pred Ee
Q psy9319 162 QD 163 (432)
Q Consensus 162 wd 163 (432)
+|
T Consensus 206 ~d 207 (355)
T 3amr_A 206 FS 207 (355)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.34 E-value=0.76 Score=44.88 Aligned_cols=122 Identities=10% Similarity=-0.068 Sum_probs=73.1
Q ss_pred CCcCEEEEEEcCCCCEEEEEe-C-CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCc
Q psy9319 51 HPVTCICIEFDPTGKYFAVGS-K-DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESGK 127 (432)
Q Consensus 51 h~~~V~~l~~spdg~~L~sgs-~-dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~~ 127 (432)
.......++++|.+..|+... . .+.|...++........+...-.....++++|++..|+.+. ..+.|..+|+....
T Consensus 200 ~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 200 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 344578999999665555443 2 36899999875433333333345788999999877777765 56789999986554
Q ss_pred EEEEEec---CCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 128 KVYDICI---QAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 128 ~~~~~~~---~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
....+.. ......+++. .+.++++-...+. |..++..+|..+..+
T Consensus 280 ~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~--------V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 280 RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA--------IFSANRLTGSDVNLL 327 (400)
T ss_dssp CEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS--------EEEEESSSCCCCEEE
T ss_pred cEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe--------EEEEEcCCCCceEEE
Confidence 3333321 2335566663 3344444444455 555554455444443
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.31 E-value=0.027 Score=58.24 Aligned_cols=80 Identities=10% Similarity=0.079 Sum_probs=56.2
Q ss_pred CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceE--EEEEccCCcEE
Q psy9319 73 DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATF--TVAWHPKQYLL 150 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~--~l~fspdg~~l 150 (432)
++.|..||+.+++.+-.+... ..+.+..+...+..++.++.|+.|.+||..+|+.+..+.....+. -+.+..+|..+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~y 521 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQY 521 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEE
Confidence 478999999999887776532 233333344456778889999999999999999999887444332 24455777655
Q ss_pred EEE
Q psy9319 151 AYA 153 (432)
Q Consensus 151 ~s~ 153 (432)
+..
T Consensus 522 v~~ 524 (571)
T 2ad6_A 522 IGS 524 (571)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.27 E-value=0.43 Score=51.14 Aligned_cols=114 Identities=11% Similarity=-0.103 Sum_probs=74.4
Q ss_pred CCcCEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CC-CeEEEEeCCCCc
Q psy9319 51 HPVTCICIEFDPTGKY-FAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-ED-LTIDIAHVESGK 127 (432)
Q Consensus 51 h~~~V~~l~~spdg~~-L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~d-g~V~vwd~~~~~ 127 (432)
.......|++.+.+.. +++-...+.|.+.++........+.........|++.|.+..|+.+. .. +.|.+.++....
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 3455668999987654 45556678999999985544333333445689999999766666655 33 689999986554
Q ss_pred EEEEEe-cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 128 KVYDIC-IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 128 ~~~~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
....+. .-.....|++++.+..|+.+. ..+.|..+++
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 433333 335678899998776666664 3455444443
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.23 E-value=0.83 Score=43.11 Aligned_cols=122 Identities=5% Similarity=-0.039 Sum_probs=72.5
Q ss_pred cCCcCEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCC
Q psy9319 50 AHPVTCICIEFDPTGKYFAVGS--KDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESG 126 (432)
Q Consensus 50 ~h~~~V~~l~~spdg~~L~sgs--~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~ 126 (432)
........++++|.+..|+.+. ..+.|...++........+...-.....++|+|++..|+.+. ..+.|..+|+...
T Consensus 119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 3445578999999655555544 357888888874332222223334678999999777776665 5688999998654
Q ss_pred cEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeee
Q psy9319 127 KKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKR 180 (432)
Q Consensus 127 ~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~ 180 (432)
....... .......+++.. +.++++-...+. |..++..+|.....
T Consensus 199 ~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~--------V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 199 NRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS--------ILACNKYTGEGLRE 244 (318)
T ss_dssp SCEEEECSCCSCEEEEEEET-TEEEEEETTTTE--------EEEEETTTCCSCEE
T ss_pred ceEEEecCCCCCceEEEEeC-CEEEEEecCCCe--------EEEEECCCCCceEE
Confidence 3322222 234456677653 344444445556 55555555544333
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.22 E-value=0.15 Score=48.40 Aligned_cols=111 Identities=12% Similarity=-0.035 Sum_probs=71.0
Q ss_pred CEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEE
Q psy9319 54 TCICIEFDPT-GKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVY 130 (432)
Q Consensus 54 ~V~~l~~spd-g~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~ 130 (432)
....+++.+. +.++++-...+.|.++++........+.........+++.|.+..|+.+.. .+.|...++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 4457888874 455555566789999998754333333344456889999997666666552 5789888886443322
Q ss_pred EEe-cCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 131 DIC-IQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 131 ~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
... .-.....++|+|++..|+.+. ..+.|..+|+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 222 234467899999766666554 4566555554
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.19 E-value=0.16 Score=50.26 Aligned_cols=118 Identities=10% Similarity=0.004 Sum_probs=71.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceee--EEEccCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeC
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQ--NILKAHPVTCICIEFDP-TGKYFAVGSKDALVSLWDA 81 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~--~~l~~h~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~ 81 (432)
+....+++++++..++++......+....+.+ + ..+... ..+.. ......++++| +|.++++-...+.|..++.
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~-~-~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYIL-T-RESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEE-E-GGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEE-e-CCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 34467888898885546544333333322222 2 222221 23322 22345788999 7777777667889999999
Q ss_pred CCCeeEEEEee-CCCCEEEEEEeeCCCEEEEE-eCCCeEEEEeCCC
Q psy9319 82 AELTCIRTFQR-LDWPVRAISFSHDGALIASG-SEDLTIDIAHVES 125 (432)
Q Consensus 82 ~~~~~~~~~~~-h~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~~~ 125 (432)
.++.....+.. .....+.++|+|+|++|+.+ ...+.|..++...
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 87654222221 22457889999999965555 4678899987653
No 282
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.17 E-value=0.29 Score=47.28 Aligned_cols=155 Identities=10% Similarity=-0.078 Sum_probs=85.2
Q ss_pred cccccCCCCcceeeeeeecCCC------ceeEEEEeecCc--cee-eEEEcc-----CCcCEEEEEEcC--CCC--EEEE
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISP------KQLDFKFKEHHK--LEE-QNILKA-----HPVTCICIEFDP--TGK--YFAV 69 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~------~~~~i~~~d~~~--~~~-~~~l~~-----h~~~V~~l~~sp--dg~--~L~s 69 (432)
.++.+.|++..+++++.+.... ..+.|.++|..+ ++. ...+.+ .......+.+.+ +|. ++++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 5566778776654433333211 244566677652 221 112333 123556666655 454 4444
Q ss_pred EeC--CCeEEEEeCCCC--ee--EEEEeeC-CCCEEEEEEeeCCCEEEEEeC-----------------CCeEEEEeCCC
Q psy9319 70 GSK--DALVSLWDAAEL--TC--IRTFQRL-DWPVRAISFSHDGALIASGSE-----------------DLTIDIAHVES 125 (432)
Q Consensus 70 gs~--dg~I~iwd~~~~--~~--~~~~~~h-~~~V~~i~~spdg~~l~sgs~-----------------dg~V~vwd~~~ 125 (432)
... +.+|.+|++... .. +..+.+. -...+.+.+.++|.++++... .|.|..+|.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-- 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-- 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence 443 467888776543 22 2233322 245889999999987777541 245666665
Q ss_pred CcEEEEEecCCceEEEEEccCCcEEEEEE-CCCeEEEEeC
Q psy9319 126 GKKVYDICIQAATFTVAWHPKQYLLAYAC-DDKYDRKQDC 164 (432)
Q Consensus 126 ~~~~~~~~~~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~ 164 (432)
++.......-...+.++|+||++.|+.+. ..+.|..|++
T Consensus 211 ~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 211 NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 33333333445578899999998877765 4566555543
No 283
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.16 E-value=0.059 Score=56.78 Aligned_cols=133 Identities=12% Similarity=0.049 Sum_probs=83.3
Q ss_pred eEEEEeecCcceeeEEEccCCc-CEEEEEEcC--CCCEEEEEeC------CCeEEEEeCCCCeeEEEEeeCC--------
Q psy9319 32 LDFKFKEHHKLEEQNILKAHPV-TCICIEFDP--TGKYFAVGSK------DALVSLWDAAELTCIRTFQRLD-------- 94 (432)
Q Consensus 32 ~~i~~~d~~~~~~~~~l~~h~~-~V~~l~~sp--dg~~L~sgs~------dg~I~iwd~~~~~~~~~~~~h~-------- 94 (432)
..+..+|..+|+.+..+..... ....+..+| .+..++.++. ++.|..+|..+|+.+-.+....
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~ 206 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYE 206 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccc
Confidence 3566678888888777654210 000111122 1334555433 5899999999999887775210
Q ss_pred -----------------------CCEEEEEEeeCCCEEEEEeCCC-------------------eEEEEeCCCCcEEEEE
Q psy9319 95 -----------------------WPVRAISFSHDGALIASGSEDL-------------------TIDIAHVESGKKVYDI 132 (432)
Q Consensus 95 -----------------------~~V~~i~~spdg~~l~sgs~dg-------------------~V~vwd~~~~~~~~~~ 132 (432)
.....++++|+...++.++.++ .|..+|..+|+.+..+
T Consensus 207 ~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~ 286 (668)
T 1kv9_A 207 HPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY 286 (668)
T ss_dssp SHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred ccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe
Confidence 0112467888888888888776 4999999999999888
Q ss_pred ecC----------CceEEEEEccCCc---EEEEEECCCeEEEEeC
Q psy9319 133 CIQ----------AATFTVAWHPKQY---LLAYACDDKYDRKQDC 164 (432)
Q Consensus 133 ~~~----------~~V~~l~fspdg~---~l~s~s~d~~I~vwd~ 164 (432)
... .++....+..+|. .++.++.+|.+.++|.
T Consensus 287 ~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~ 331 (668)
T 1kv9_A 287 QVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDR 331 (668)
T ss_dssp ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred ecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEEC
Confidence 621 2232233334665 6888889999555544
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.03 E-value=0.054 Score=56.10 Aligned_cols=79 Identities=14% Similarity=0.210 Sum_probs=56.8
Q ss_pred CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceEE--EEEccCCcEE
Q psy9319 73 DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATFT--VAWHPKQYLL 150 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~~--l~fspdg~~l 150 (432)
+|.|.-||+.+|+.+-..... .++..-.....+.+++.|+.|+.++.||..+|+.+..+.....+.+ +.|..+|+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 578999999999887666533 2222222333567888899999999999999999999875555443 6677788644
Q ss_pred EE
Q psy9319 151 AY 152 (432)
Q Consensus 151 ~s 152 (432)
++
T Consensus 544 v~ 545 (582)
T 1flg_A 544 LG 545 (582)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.89 E-value=0.29 Score=52.18 Aligned_cols=108 Identities=13% Similarity=0.038 Sum_probs=70.0
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeC-----CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 52 PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRL-----DWPVRAISFSHDGALIASGSEDLTIDIAHVESG 126 (432)
Q Consensus 52 ~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h-----~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~ 126 (432)
...|.++...++|.+.+ |+. +-|.+||..++......... ...|.++...++|.+++....+| |..+|..++
T Consensus 449 ~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred CCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 46789998888886544 455 56889998876554332222 35799999988888665443344 778988766
Q ss_pred cEEEEEe-----cCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 127 KKVYDIC-----IQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 127 ~~~~~~~-----~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
... .+. ....|.++..+++|.+.++ +.+|.|..||.
T Consensus 526 ~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~ 566 (781)
T 3v9f_A 526 LVR-KFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSA 566 (781)
T ss_dssp EEE-EECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCT
T ss_pred eEE-EccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECC
Confidence 433 332 2345889999888886554 44664244443
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.82 E-value=0.66 Score=48.37 Aligned_cols=154 Identities=7% Similarity=-0.086 Sum_probs=87.7
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYF-AVGSKDALVSLWDAAEL 84 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L-~sgs~dg~I~iwd~~~~ 84 (432)
....++|++....+..+-..+ ..|..++.........+.........+++++.+..| ++-...+.|.+.++...
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~-----~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISL-----KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred ceEEEEEECCCCEEEEEECCC-----CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 345566666554443432211 233333433322223333333456688888765544 55556688999998754
Q ss_pred eeEEEEeeCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEE-CCCeEEE
Q psy9319 85 TCIRTFQRLDWPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYAC-DDKYDRK 161 (432)
Q Consensus 85 ~~~~~~~~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s-~d~~I~v 161 (432)
.....+...-.....+++.|....|+.... .+.|...++.................+++++++..|+.+. ..+.|..
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 433333334456789999996556665552 5678888886554443344445577888888765555553 3455555
Q ss_pred EeC
Q psy9319 162 QDC 164 (432)
Q Consensus 162 wd~ 164 (432)
+|+
T Consensus 193 ~d~ 195 (628)
T 4a0p_A 193 SNM 195 (628)
T ss_dssp EET
T ss_pred EcC
Confidence 554
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.77 E-value=0.27 Score=52.48 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=71.3
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEee---CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE
Q psy9319 52 PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQR---LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK 128 (432)
Q Consensus 52 ~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~---h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~ 128 (432)
...|.++...++|.+.+ |+.++-|..+|..++... .+.. ....|.++...++|.+++ |+. +-|.++|..++..
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSC
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeE
Confidence 46789998888887554 666677889998776543 2321 345799998888876554 444 4588999887664
Q ss_pred EEEEe-c-----CCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 129 VYDIC-I-----QAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 129 ~~~~~-~-----~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
..... . ...|.++..+++|.+.+ |+.++-+..||.
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~ 522 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTP 522 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECT
T ss_pred EecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeC
Confidence 43322 1 35688999999888665 444333444544
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.75 E-value=0.28 Score=48.34 Aligned_cols=103 Identities=10% Similarity=0.053 Sum_probs=73.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe------------eEEEEee------CCCCEEEEEEee---CCCEEEEE
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELT------------CIRTFQR------LDWPVRAISFSH---DGALIASG 112 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~------------~~~~~~~------h~~~V~~i~~sp---dg~~l~sg 112 (432)
.|..+..||+|.+||..+ +..|.|..+..+. ....+.- ...+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999998876 5588888876221 1223331 246799999999 56789999
Q ss_pred eCCCeEEEEeCCCCc--EEEEEe----------cCCceEEEEEccCCcEEEEEE--CCCe
Q psy9319 113 SEDLTIDIAHVESGK--KVYDIC----------IQAATFTVAWHPKQYLLAYAC--DDKY 158 (432)
Q Consensus 113 s~dg~V~vwd~~~~~--~~~~~~----------~~~~V~~l~fspdg~~l~s~s--~d~~ 158 (432)
..|++|++||+.... +. .+. ....|.+++|.++|-.|+..+ .+|.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GD 204 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGD 204 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCC
Confidence 999999999997532 22 221 114588899998876666655 5666
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.71 E-value=0.28 Score=46.73 Aligned_cols=125 Identities=10% Similarity=0.087 Sum_probs=83.2
Q ss_pred EccCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCeeEEEEeeC-----C--CCEEEEEE---eeCCCEEEEEe---
Q psy9319 48 LKAHPVTCICIEFDPTGKYFAVG-SKDALVSLWDAAELTCIRTFQRL-----D--WPVRAISF---SHDGALIASGS--- 113 (432)
Q Consensus 48 l~~h~~~V~~l~~spdg~~L~sg-s~dg~I~iwd~~~~~~~~~~~~h-----~--~~V~~i~~---spdg~~l~sgs--- 113 (432)
+.+......+++|++....|+.+ -..++|..||...+........+ . ..+..+.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 34444455688998854455444 47899999999865443332222 1 13678999 68887777543
Q ss_pred ----------CCCeEEEEeCC---CCcEEEEEec-------------C-CceEEEEEccCCcEEEEEECC-CeEEEEeCC
Q psy9319 114 ----------EDLTIDIAHVE---SGKKVYDICI-------------Q-AATFTVAWHPKQYLLAYACDD-KYDRKQDCG 165 (432)
Q Consensus 114 ----------~dg~V~vwd~~---~~~~~~~~~~-------------~-~~V~~l~fspdg~~l~s~s~d-~~I~vwd~~ 165 (432)
.+..|..+|+. +++.+..... . ..+..++.+++|+..++++.. +.|..++..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 26789999999 7877666541 1 247789999999999998887 775555542
Q ss_pred --ceEEeec
Q psy9319 166 --NLKVFGF 172 (432)
Q Consensus 166 --~i~vwd~ 172 (432)
.+..|.+
T Consensus 168 G~~~~~~~~ 176 (334)
T 2p9w_A 168 GKTVSTFAW 176 (334)
T ss_dssp SCCEEEEEE
T ss_pred CCEEeeeee
Confidence 2344543
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.71 E-value=1.2 Score=42.73 Aligned_cols=120 Identities=11% Similarity=0.094 Sum_probs=79.5
Q ss_pred cCEEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy9319 53 VTCICIEF--DPT-GK-YFAVGSKDALVSLWDAA-------ELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIA 121 (432)
Q Consensus 53 ~~V~~l~~--spd-g~-~L~sgs~dg~I~iwd~~-------~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vw 121 (432)
..+..+|+ +|. +. +++....+|.+..|++. +++.+.+|. ..+.+..|...+....|+.+-.+.-|+.+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence 34455666 774 44 57778888999998873 234566665 44678899999988899999998778888
Q ss_pred eCC-----CCcEEEEEe---cCCceEEEEE--ccCCc-EEEEEE-CCCeEEEEeCCceEEeecC-CCceeeee
Q psy9319 122 HVE-----SGKKVYDIC---IQAATFTVAW--HPKQY-LLAYAC-DDKYDRKQDCGNLKVFGFL-PEPIKKRK 181 (432)
Q Consensus 122 d~~-----~~~~~~~~~---~~~~V~~l~f--spdg~-~l~s~s-~d~~I~vwd~~~i~vwd~~-~~~~~~~~ 181 (432)
|.. ++..+..+. ....+..|++ .+++. +|++++ .+++ +.+||.. +...+..+
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s--------~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS--------YAIYDRQGKNKYVADF 271 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE--------EEEEESSTTCCEEEEE
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE--------EEEEECCCCCcEEEEE
Confidence 855 344555553 2246888887 45555 666666 4556 5555554 44444444
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.46 E-value=2 Score=46.03 Aligned_cols=122 Identities=10% Similarity=-0.063 Sum_probs=71.9
Q ss_pred cCCcCEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCCC
Q psy9319 50 AHPVTCICIEFDPTGKYFAVGS-KD-ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-EDLTIDIAHVESG 126 (432)
Q Consensus 50 ~h~~~V~~l~~spdg~~L~sgs-~d-g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~~ 126 (432)
........|+++|.+..|+.+. .. +.|.+.++........+...-.....|++++.+..|+.+. ..+.|...++...
T Consensus 511 ~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 511 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 3345578999999755555443 33 6899999875443333333345789999998777777665 4678999998655
Q ss_pred cEEEEEec---CCceEEEEEccCCcEEEEEE-CCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 127 KKVYDICI---QAATFTVAWHPKQYLLAYAC-DDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 127 ~~~~~~~~---~~~V~~l~fspdg~~l~s~s-~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
.....+.. ......|++. +..|+.+. ..+. |...+..+|..+..+
T Consensus 591 ~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~--------I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 591 NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA--------IFSANRLTGSDVNLL 639 (791)
T ss_dssp SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE--------EEEEETTTCCCCEEE
T ss_pred ceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCE--------EEEEeCCCCcceEEe
Confidence 44433332 1234456553 33444443 4444 444454455444443
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.21 E-value=0.75 Score=43.42 Aligned_cols=105 Identities=6% Similarity=0.073 Sum_probs=66.5
Q ss_pred CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe-e---CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 51 HPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ-R---LDWPVRAISFSHDGALIASGSEDLTIDIAHVESG 126 (432)
Q Consensus 51 h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~-~---h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~ 126 (432)
....+..+++++++..++ ++.+|.+.+.+.+.|..-..+. + +...+.++.+.|++..++++. ++.| ++....|
T Consensus 203 ~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT
T ss_pred CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC
Confidence 456788899999887654 4567888777533233222221 1 223588999998877666654 6666 4556666
Q ss_pred cEEEEEe----cCCceEEEEEccCCcEEEEEECCCeE
Q psy9319 127 KKVYDIC----IQAATFTVAWHPKQYLLAYACDDKYD 159 (432)
Q Consensus 127 ~~~~~~~----~~~~V~~l~fspdg~~l~s~s~d~~I 159 (432)
.....+. ....+.++.|.+++. +++++.+|.|
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i 315 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGIL 315 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEE
T ss_pred cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceE
Confidence 6555554 235688899986655 5556678873
No 293
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.06 E-value=0.26 Score=51.10 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=52.9
Q ss_pred CCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecCCceE--EEEEccCCcEE
Q psy9319 73 DALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDICIQAATF--TVAWHPKQYLL 150 (432)
Q Consensus 73 dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~~~V~--~l~fspdg~~l 150 (432)
+|.|.-||+.+|+.+-.... ..++..-.+...+.+++.++.|+.|+.||..+|+.+..+.....+. -+.|..+|+..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY 530 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEE
Confidence 46788899999887766542 2222222233456788889999999999999999999887443322 25566677643
Q ss_pred E
Q psy9319 151 A 151 (432)
Q Consensus 151 ~ 151 (432)
+
T Consensus 531 v 531 (599)
T 1w6s_A 531 V 531 (599)
T ss_dssp E
T ss_pred E
Confidence 3
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.06 E-value=0.032 Score=59.18 Aligned_cols=110 Identities=11% Similarity=-0.074 Sum_probs=64.6
Q ss_pred EEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe-CC-CeEEEEeCCCCcEEEE
Q psy9319 55 CICIEFDPT-GKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS-ED-LTIDIAHVESGKKVYD 131 (432)
Q Consensus 55 V~~l~~spd-g~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs-~d-g~V~vwd~~~~~~~~~ 131 (432)
...+++.+. +.++++-...+.|.++++........+.........++++|.+.+|+.+. .. +.|.++++........
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 456788764 45555555678899999875443333332234567889999665555444 22 6788887754332222
Q ss_pred Ee-cCCceEEEEEccCCcEEEEE-ECCCeEEEEeC
Q psy9319 132 IC-IQAATFTVAWHPKQYLLAYA-CDDKYDRKQDC 164 (432)
Q Consensus 132 ~~-~~~~V~~l~fspdg~~l~s~-s~d~~I~vwd~ 164 (432)
+. .......|+|+|++..|+.+ +..+.|..+|+
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 22 22345679999876555544 45566555444
No 295
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.04 E-value=0.091 Score=55.06 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=69.5
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEeCCCCee--EEEEee-CCCCEEEEEEeeCCCEEEEEe-CCCeEEE
Q psy9319 57 CIEFDP-TGKYFAVGSKDA-----------LVSLWDAAELTC--IRTFQR-LDWPVRAISFSHDGALIASGS-EDLTIDI 120 (432)
Q Consensus 57 ~l~~sp-dg~~L~sgs~dg-----------~I~iwd~~~~~~--~~~~~~-h~~~V~~i~~spdg~~l~sgs-~dg~V~v 120 (432)
+.++.| +|.+++.|+.+. .+.+||+.++.. +..+.. +.....++++.+++.+++.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456677 888888887543 588999887653 223322 333344577788999999988 4568999
Q ss_pred EeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEE-CC-----CeEEEEeCC
Q psy9319 121 AHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYAC-DD-----KYDRKQDCG 165 (432)
Q Consensus 121 wd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s-~d-----~~I~vwd~~ 165 (432)
||..++.-...-. ....-.+++..++|++++.|+ .+ ..+.+||..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 9998764332211 122223456667899999988 34 334555543
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.02 E-value=0.065 Score=56.78 Aligned_cols=120 Identities=11% Similarity=-0.067 Sum_probs=65.7
Q ss_pred cCEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEE-eCCCeEEEEeCCCCcEE
Q psy9319 53 VTCICIEFDPTGKYFAVGS-KD-ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASG-SEDLTIDIAHVESGKKV 129 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs-~d-g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sg-s~dg~V~vwd~~~~~~~ 129 (432)
.....++++|.+..|+.+. .. +.|.++++........+...-...+.|+|+|++..|+.+ +..+.|.++|+......
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 3456788998654444333 22 678888776332222222223456789999976655554 46678999998654333
Q ss_pred EEEec---CCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCceeeee
Q psy9319 130 YDICI---QAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRK 181 (432)
Q Consensus 130 ~~~~~---~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~ 181 (432)
..+.. ......|++..+ .++++....+. |..++..+|..+..+
T Consensus 576 ~~~~~~~~~~~P~glavd~~-~lywtd~~~~~--------V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 576 TILEDEKRLAHPFSLAVFED-KVFWTDIINEA--------IFSANRLTGSDVNLL 621 (699)
T ss_dssp EECCCSSSCSSCCCCEEETT-EEEEECSTTTC--------EEEEETTTEEEEECC
T ss_pred EEEecCCcCCCceEeEEECC-EEEEEeCCCCe--------EEEEEccCCCceEEe
Confidence 32221 122344555443 34444444455 555555555555544
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.01 E-value=0.079 Score=55.54 Aligned_cols=148 Identities=6% Similarity=-0.043 Sum_probs=79.0
Q ss_pred cccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEcc-----CCcCEEEEEEcCCCCEEEEEeCC---------
Q psy9319 8 PLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKA-----HPVTCICIEFDPTGKYFAVGSKD--------- 73 (432)
Q Consensus 8 ~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~-----h~~~V~~l~~spdg~~L~sgs~d--------- 73 (432)
..+.+.+++.++++.+..+.....-++.+||..+..-.. +.. ....-....+..++..++.|+.+
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~ 368 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPS 368 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCc
Confidence 344555778877666645544444567777776554221 110 00000001123445555555444
Q ss_pred CeEEEEeCCCCeeEEEEeeCC---------CCEEEEEEee-CCCEEEEEeCCC-----------eEEEEeCCCCcEEEEE
Q psy9319 74 ALVSLWDAAELTCIRTFQRLD---------WPVRAISFSH-DGALIASGSEDL-----------TIDIAHVESGKKVYDI 132 (432)
Q Consensus 74 g~I~iwd~~~~~~~~~~~~h~---------~~V~~i~~sp-dg~~l~sgs~dg-----------~V~vwd~~~~~~~~~~ 132 (432)
..+..||..+.........+. ..-.++.|.. ++.+++.|+.++ .|.+||..+..-....
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 356788887665433332221 1234455544 677777777432 6788888777654432
Q ss_pred --e--cCCceEEEEEccCCcEEEEEECC
Q psy9319 133 --C--IQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 133 --~--~~~~V~~l~fspdg~~l~s~s~d 156 (432)
. ....-.+++..|+|.++++|+.+
T Consensus 449 ~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 449 SNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred cCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 1 22222345667899999999864
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.93 E-value=1.8 Score=44.88 Aligned_cols=154 Identities=14% Similarity=0.022 Sum_probs=87.2
Q ss_pred cccccccCCCCcceeeeeeecCCCceeEEEEeecCcce-eeEEEccCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Q psy9319 6 FIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE-EQNILKAHPVTCICIEFDPTGK-YFAVGSKDALVSLWDAAE 83 (432)
Q Consensus 6 ~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~-~~~~l~~h~~~V~~l~~spdg~-~L~sgs~dg~I~iwd~~~ 83 (432)
....+++++.+..+..+ |. ....|..++..... ....+.........+++++.+. ++++-...+.|.+.++..
T Consensus 41 ~~~~ld~~~~~~~ly~s---D~--~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWS---DV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CEEEEEEETTTTEEEEE---ET--TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEEeCCCEEEEE---EC--CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 34556666655444333 11 11223333333222 1233443335678999999555 445556678999999985
Q ss_pred CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcEEEEEE-CCCeE
Q psy9319 84 LTCIRTFQRLDWPVRAISFSHDGALIASGSE--DLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYLLAYAC-DDKYD 159 (432)
Q Consensus 84 ~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s-~d~~I 159 (432)
......+...-.....|++.|.+..|+.+.. .+.|...++.......... .-.....+++++++..|+.+. ..+.|
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 4433333334456788999997666665553 4677777776443333332 334578899998766665554 44566
Q ss_pred EEEeC
Q psy9319 160 RKQDC 164 (432)
Q Consensus 160 ~vwd~ 164 (432)
..+|+
T Consensus 196 ~~~~~ 200 (619)
T 3s94_A 196 HKSNL 200 (619)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 66554
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.59 E-value=1 Score=44.38 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=71.4
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeC----CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc---------
Q psy9319 61 DPTGKYFAVGSKDALVSLWDAAELTCIRTFQRL----DWPVRAISFSHDGALIASGSEDLTIDIAHVESGK--------- 127 (432)
Q Consensus 61 spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h----~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~--------- 127 (432)
+.+|.-++.+- ++.||.-++......+.+... -..|..+..||+|.+||..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 44666666554 567887777744445555432 22688899999999998875 4578888776221
Q ss_pred ---EEEEEe-------cCCceEEEEEccC---CcEEEEEECCCeEEEEeCCc
Q psy9319 128 ---KVYDIC-------IQAATFTVAWHPK---QYLLAYACDDKYDRKQDCGN 166 (432)
Q Consensus 128 ---~~~~~~-------~~~~V~~l~fspd---g~~l~s~s~d~~I~vwd~~~ 166 (432)
....+. ...+|..+.|||- +..|++-..|+.|++||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 122332 2467999999995 46889899999988888754
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.56 E-value=0.52 Score=42.24 Aligned_cols=139 Identities=13% Similarity=0.024 Sum_probs=77.8
Q ss_pred CcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee------eEEEc--cCCcCEEEEEEcCCCCEEEEEeCCCeE
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE------QNILK--AHPVTCICIEFDPTGKYFAVGSKDALV 76 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~------~~~l~--~h~~~V~~l~~spdg~~L~sgs~dg~I 76 (432)
+.+.+++|+|++.++.+ .++ .+...+..+... -..+- +-.. ..++.|.|+|.+.++ .||.|
T Consensus 41 ~~~~~laf~P~G~LYaV---~~G-----~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV---LND-----KIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKL 109 (236)
T ss_dssp TTCSEEEECTTSCEEEE---ETT-----EEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEE
T ss_pred ccceeEEECCCccEEEE---eCC-----eEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEE
Confidence 45678999998887744 222 233333333111 11221 1112 468899999987777 56999
Q ss_pred EEEeCCCCeeE------EEEee-CCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcE------EEEEe--cCCceEEE
Q psy9319 77 SLWDAAELTCI------RTFQR-LDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKK------VYDIC--IQAATFTV 141 (432)
Q Consensus 77 ~iwd~~~~~~~------~~~~~-h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~------~~~~~--~~~~V~~l 141 (432)
.-++..+.... ..+-. .=..+..+.+.|+|.+.+.. |+.+.-+...++.. ...+. .......+
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l 187 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL 187 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence 88886431110 11111 11467999999999877666 77765444332221 11121 12224446
Q ss_pred EEccCCcEEEEEECCCe
Q psy9319 142 AWHPKQYLLAYACDDKY 158 (432)
Q Consensus 142 ~fspdg~~l~s~s~d~~ 158 (432)
.|+|+|.+.++. ++.
T Consensus 188 ~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 188 FFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EECTTSCEEEEE--TTE
T ss_pred EECCCCcEEEEe--CCe
Confidence 788988877765 654
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.47 E-value=1.1 Score=44.74 Aligned_cols=103 Identities=8% Similarity=0.014 Sum_probs=63.4
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeE--EEEee------CCCCEEEEEEeeC---CCEEEEEeC-------
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCI--RTFQR------LDWPVRAISFSHD---GALIASGSE------- 114 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~--~~~~~------h~~~V~~i~~spd---g~~l~sgs~------- 114 (432)
...+.++|.|+|+++++-...+.|.+++..++... ..+.. ..+....|+|+|+ +..|+.+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45679999999997777554457988887655432 22221 2456779999995 555554432
Q ss_pred ------CCeEEEEeCCCC--c-----EEE-EEe--cCCceEEEEEccCCcEEEEEEC
Q psy9319 115 ------DLTIDIAHVESG--K-----KVY-DIC--IQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 115 ------dg~V~vwd~~~~--~-----~~~-~~~--~~~~V~~l~fspdg~~l~s~s~ 155 (432)
...|.-+++..+ . .+. .+. ..+....|+|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665432 1 111 122 2234788999999987777554
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.43 E-value=1 Score=43.23 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=67.5
Q ss_pred EccCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeE--EEE----eeCCCCEEEEEEeeC---CCEEEEE---eCC
Q psy9319 48 LKAHPVTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCI--RTF----QRLDWPVRAISFSHD---GALIASG---SED 115 (432)
Q Consensus 48 l~~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~--~~~----~~h~~~V~~i~~spd---g~~l~sg---s~d 115 (432)
+-..-...+.++|.|+|.++++-...|.|++++...+... ..+ .........|+++|+ +..|+.. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3333455689999999998777666899999987655532 111 123467899999995 3444433 245
Q ss_pred CeEEEEeCCCC----------cEEE-EEe--cCCceEEEEEccCCcEEEEEEC
Q psy9319 116 LTIDIAHVESG----------KKVY-DIC--IQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 116 g~V~vwd~~~~----------~~~~-~~~--~~~~V~~l~fspdg~~l~s~s~ 155 (432)
+.|.-|.+..+ +.+. .+. .......|+|.|||.++++.+.
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 56666766541 1111 122 1223456999999987777554
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.43 E-value=0.81 Score=43.80 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=61.8
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee--EEEEe---eCCCCEEEEEEeeC---CCEEEEEeC-C-----CeE
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC--IRTFQ---RLDWPVRAISFSHD---GALIASGSE-D-----LTI 118 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~--~~~~~---~h~~~V~~i~~spd---g~~l~sgs~-d-----g~V 118 (432)
.....++|.|+|+++++ ..++.|.+++ .+.. +..+. ........++|+|+ +..|+.+.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999986555 5569999998 3432 11111 12356889999998 555554433 2 678
Q ss_pred EEEeCCCCcE-----EE-EEec-C---CceEEEEEccCCcEEEEEE
Q psy9319 119 DIAHVESGKK-----VY-DICI-Q---AATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 119 ~vwd~~~~~~-----~~-~~~~-~---~~V~~l~fspdg~~l~s~s 154 (432)
..++...+.. +. .+.. . .....++|+|+|.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8888765421 11 1221 1 1246799999997666544
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.23 E-value=0.65 Score=44.59 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=62.2
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-eEEEEe---eCCCCEEEEEEeeC---CCEEEEEeC----C----C
Q psy9319 52 PVTCICIEFDPTGKYFAVGSKDALVSLWDAAELT-CIRTFQ---RLDWPVRAISFSHD---GALIASGSE----D----L 116 (432)
Q Consensus 52 ~~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~-~~~~~~---~h~~~V~~i~~spd---g~~l~sgs~----d----g 116 (432)
-.....++|.|+|+++++ ..++.|.++|. .+. .+..+. ........|+|+|+ +..|+.+.. + +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 345679999999985555 55699999974 454 222111 12356889999997 455554432 3 5
Q ss_pred eEEEEeCCCC--c-----EE-EEEe--cCCceEEEEEccCCcEEEEEE
Q psy9319 117 TIDIAHVESG--K-----KV-YDIC--IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 117 ~V~vwd~~~~--~-----~~-~~~~--~~~~V~~l~fspdg~~l~s~s 154 (432)
.|..|+...+ . .+ ..+. .......++|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6888887654 1 11 1122 112346799999998777644
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.21 E-value=1.8 Score=40.67 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=65.6
Q ss_pred cCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC--CCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc
Q psy9319 50 AHPVTCICIEFDPTGKYFAVGSKDALVSLWDA--AELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGK 127 (432)
Q Consensus 50 ~h~~~V~~l~~spdg~~L~sgs~dg~I~iwd~--~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~ 127 (432)
++...+.+++++|++.+++.+...+..+-+|- .+...+ -......+..+.++|++..+ .++.+|.+.+.+...|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 44567889999999888776654433334453 233333 12345678899999988765 45567887776533344
Q ss_pred EEEEEec-----CCceEEEEEccCCcEEEEEECCCe
Q psy9319 128 KVYDICI-----QAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 128 ~~~~~~~-----~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
....+.. ...+.++.+.|++.+++++. ++.
T Consensus 237 tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~ 271 (327)
T 2xbg_A 237 NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA 271 (327)
T ss_dssp EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC
T ss_pred eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCe
Confidence 3333321 23488899998887766554 554
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.13 E-value=6.2 Score=40.83 Aligned_cols=117 Identities=9% Similarity=-0.109 Sum_probs=71.1
Q ss_pred EccCCcCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeC--CCeEEEEeCC
Q psy9319 48 LKAHPVTCICIEFDPT-GKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSE--DLTIDIAHVE 124 (432)
Q Consensus 48 l~~h~~~V~~l~~spd-g~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~--dg~V~vwd~~ 124 (432)
+.........+++.+. +++.++-+..+.|.+.++........+...-....++++.|....|+.+.. .+.|...++.
T Consensus 387 ~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 387 VTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC
Confidence 3333345678899874 445555566789999998754332223333456899999996555555442 3677777775
Q ss_pred CCcEEEEEe-cCCceEEEEEccCCcEEEEEEC-CCeEEEEeC
Q psy9319 125 SGKKVYDIC-IQAATFTVAWHPKQYLLAYACD-DKYDRKQDC 164 (432)
Q Consensus 125 ~~~~~~~~~-~~~~V~~l~fspdg~~l~s~s~-d~~I~vwd~ 164 (432)
......... .-.....+++++++..|+.+.. .+.|..+++
T Consensus 467 G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 467 GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 443332222 3445778999987766666643 455444443
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.09 E-value=6.1 Score=40.97 Aligned_cols=111 Identities=10% Similarity=0.046 Sum_probs=70.9
Q ss_pred cCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCeeEEEEe-eCCCCEEEEEEee-CCCEEEEEeCCC--eEEEEeCCCCc
Q psy9319 53 VTCICIEFDPTGKYF-AVGSKDALVSLWDAAELTCIRTFQ-RLDWPVRAISFSH-DGALIASGSEDL--TIDIAHVESGK 127 (432)
Q Consensus 53 ~~V~~l~~spdg~~L-~sgs~dg~I~iwd~~~~~~~~~~~-~h~~~V~~i~~sp-dg~~l~sgs~dg--~V~vwd~~~~~ 127 (432)
..+..+++.+.+..| .+-+..+.|.+.++. |.....+. ......+++++.| .|.++.+-.... .|...++....
T Consensus 389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE 467 (628)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred CCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence 457899999976655 466667889999987 44443443 3456789999999 555444433333 57777775443
Q ss_pred EEEEEe-cCCceEEEEEccCCcEEEEEEC-CCeEEEEeC
Q psy9319 128 KVYDIC-IQAATFTVAWHPKQYLLAYACD-DKYDRKQDC 164 (432)
Q Consensus 128 ~~~~~~-~~~~V~~l~fspdg~~l~s~s~-d~~I~vwd~ 164 (432)
...... .-.....+++++++..|+.+.. .+.|..+++
T Consensus 468 ~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~ 506 (628)
T 4a0p_A 468 REVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDL 506 (628)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 333333 3345688999998766766654 466544444
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.84 E-value=3.3 Score=39.73 Aligned_cols=109 Identities=10% Similarity=0.039 Sum_probs=71.2
Q ss_pred eEEEccCC-cCEEEEEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCC
Q psy9319 45 QNILKAHP-VTCICIEFDPTGKYFAVGS-----------------KDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDG 106 (432)
Q Consensus 45 ~~~l~~h~-~~V~~l~~spdg~~L~sgs-----------------~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg 106 (432)
+..+.+.. ...+.+++.++|.+.++.. ..|.|..+|. +.+ ..+...-...+.++||||+
T Consensus 156 ~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg 232 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDG 232 (355)
T ss_dssp EEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTS
T ss_pred EeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCC
Confidence 34444432 4578999999998777654 1245655665 332 2333334567899999999
Q ss_pred CEEEEEe-CCCeEEEEeCCC-CcE--EEEEecCCceEEEEEcc-CCcEEEEEECC
Q psy9319 107 ALIASGS-EDLTIDIAHVES-GKK--VYDICIQAATFTVAWHP-KQYLLAYACDD 156 (432)
Q Consensus 107 ~~l~sgs-~dg~V~vwd~~~-~~~--~~~~~~~~~V~~l~fsp-dg~~l~s~s~d 156 (432)
+.|+.+. ..+.|+.|++.. +.. ...+...+..-.+++++ +|.+.+++..+
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 9887765 578999999864 332 12333455567789999 59888767654
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.78 E-value=1.4 Score=42.07 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=75.2
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEc---cCCcCEEEEEEcCC---CCEEEEE-eCC---
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILK---AHPVTCICIEFDPT---GKYFAVG-SKD--- 73 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~---~h~~~V~~l~~spd---g~~L~sg-s~d--- 73 (432)
.+.-..++|.|++.++ ++.. + ..|..++......+..+. ........++|+|+ +..|+.+ +..
T Consensus 30 l~~P~~ia~~pdG~l~-V~e~-~-----g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 30 LEVPWALAFLPDGGML-IAER-P-----GRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp CSCEEEEEECTTSCEE-EEET-T-----TEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCCceEEEEcCCCeEE-EEeC-C-----CeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 3445678899999866 4421 1 234444411112222221 22356789999998 4455444 322
Q ss_pred --CeEEEEeCCCCe-----eE-EEEee---CCCCEEEEEEeeCCCEEEEEeC-------------CCeEEEEeCCC----
Q psy9319 74 --ALVSLWDAAELT-----CI-RTFQR---LDWPVRAISFSHDGALIASGSE-------------DLTIDIAHVES---- 125 (432)
Q Consensus 74 --g~I~iwd~~~~~-----~~-~~~~~---h~~~V~~i~~spdg~~l~sgs~-------------dg~V~vwd~~~---- 125 (432)
+.|..|+...+. .+ ..+.. .......++|.|||.+.++.+. .|.|.-++...
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~ 182 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAP 182 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCT
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCC
Confidence 578888876431 11 11221 0112358999999976555432 25666666643
Q ss_pred ----------CcEEEEEecCCceEEEEEcc-CCcEEEEEE
Q psy9319 126 ----------GKKVYDICIQAATFTVAWHP-KQYLLAYAC 154 (432)
Q Consensus 126 ----------~~~~~~~~~~~~V~~l~fsp-dg~~l~s~s 154 (432)
...+....+ .....++|+| +|.++++-.
T Consensus 183 ~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp TCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEE
T ss_pred CCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEc
Confidence 111222222 2356789999 666555543
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.47 E-value=1.4 Score=42.21 Aligned_cols=141 Identities=9% Similarity=0.003 Sum_probs=74.8
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCcce-eeEEEc---cCCcCEEEEEEcCC---CCEEEEEeC----
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLE-EQNILK---AHPVTCICIEFDPT---GKYFAVGSK---- 72 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~-~~~~l~---~h~~~V~~l~~spd---g~~L~sgs~---- 72 (432)
.+.-..++|.|++.++ ++-. + ..|.+++ .++. .+..+. ........++|+|+ +..|+.+..
T Consensus 28 l~~P~~ia~~pdG~l~-V~e~-~-----g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYL-VTER-P-----GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp CSCEEEEEEEETTEEE-EEET-T-----TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred CCCCeEEEEcCCCeEE-EEeC-C-----CEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 3445678888998866 4421 1 3444444 3443 222221 22356789999997 444444332
Q ss_pred C----CeEEEEeCCCC--e---e--E-EEEeeC-CCCEEEEEEeeCCCEEEEEeC-------------CCeEEEEeCCCC
Q psy9319 73 D----ALVSLWDAAEL--T---C--I-RTFQRL-DWPVRAISFSHDGALIASGSE-------------DLTIDIAHVESG 126 (432)
Q Consensus 73 d----g~I~iwd~~~~--~---~--~-~~~~~h-~~~V~~i~~spdg~~l~sgs~-------------dg~V~vwd~~~~ 126 (432)
+ ..|..|+.... . . + ..+... ......++|.|||.+.++.+. .|.|..++....
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 3 56777876643 1 1 1 112211 112457999999986665432 245666665432
Q ss_pred ---------cEEEEEecCCceEEEEEcc-CCcEEEEE
Q psy9319 127 ---------KKVYDICIQAATFTVAWHP-KQYLLAYA 153 (432)
Q Consensus 127 ---------~~~~~~~~~~~V~~l~fsp-dg~~l~s~ 153 (432)
..+....+. ....++|+| +|.++++-
T Consensus 180 ~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 180 PPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 123333232 345799999 66655543
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.02 E-value=3.2 Score=41.20 Aligned_cols=104 Identities=9% Similarity=0.030 Sum_probs=55.0
Q ss_pred CCcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee--eEEEcc------CCcCEEEEEEcCC---CCEEEEEe-
Q psy9319 4 QNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNILKA------HPVTCICIEFDPT---GKYFAVGS- 71 (432)
Q Consensus 4 ~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l~~------h~~~V~~l~~spd---g~~L~sgs- 71 (432)
.+.-..++|.|++.++++. . . ...|...+..++.. +..+.. ..+....++|+|+ +..|+.+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e-~-~----gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTE-R-A----TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp CSSEEEEEECTTSCEEEEE-T-T----TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEE-c-C----CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 3445678899999877433 1 1 11344444333432 222221 2456789999995 44554433
Q ss_pred C------------CCeEEEEeCCCC--e-----eEE-EEee-CCCCEEEEEEeeCCCEEEEEe
Q psy9319 72 K------------DALVSLWDAAEL--T-----CIR-TFQR-LDWPVRAISFSHDGALIASGS 113 (432)
Q Consensus 72 ~------------dg~I~iwd~~~~--~-----~~~-~~~~-h~~~V~~i~~spdg~~l~sgs 113 (432)
. ...|.-|+...+ . .+. .+.. .......|+|.|||.+.++.+
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2 235655654321 1 111 1211 112468899999998776654
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.51 E-value=0.27 Score=44.04 Aligned_cols=100 Identities=13% Similarity=0.090 Sum_probs=63.5
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee------EEEEeeC-CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTC------IRTFQRL-DWPVRAISFSHDGALIASGSEDLTIDIAHVES 125 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~------~~~~~~h-~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~ 125 (432)
..+.+++|+|+|.+.+. .+|.+.-.+..+... -..+-.+ -....++.|.|+|.+.++ .||.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 35679999999986555 677877777654211 1111100 012467889999987776 569998887643
Q ss_pred CcEE------EEEe--cCCceEEEEEccCCcEEEEEECCCe
Q psy9319 126 GKKV------YDIC--IQAATFTVAWHPKQYLLAYACDDKY 158 (432)
Q Consensus 126 ~~~~------~~~~--~~~~V~~l~fspdg~~l~s~s~d~~ 158 (432)
...- ..+. .-..+..|.|+|+|.+.+.. |+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 2111 1111 23457899999999887766 766
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.47 E-value=1.4 Score=44.39 Aligned_cols=110 Identities=14% Similarity=0.101 Sum_probs=66.8
Q ss_pred EEEEEEcC-CC-CEEEEEeCCCeEEEEeCCCCeeEEEEeeC---CCCEEEEEE-------eeCCCEEEEEeCCC------
Q psy9319 55 CICIEFDP-TG-KYFAVGSKDALVSLWDAAELTCIRTFQRL---DWPVRAISF-------SHDGALIASGSEDL------ 116 (432)
Q Consensus 55 V~~l~~sp-dg-~~L~sgs~dg~I~iwd~~~~~~~~~~~~h---~~~V~~i~~-------spdg~~l~sgs~dg------ 116 (432)
...++|+| ++ .++++....+.|++.|+..+.....+... ......++| +++|..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 34 44455444567999999877655444322 235899999 99999777666543
Q ss_pred -eEEEEeCCC-CcEE-----EEEecCCceEEEEEccC-CcEEEEEECCCeEEEEeC
Q psy9319 117 -TIDIAHVES-GKKV-----YDICIQAATFTVAWHPK-QYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 117 -~V~vwd~~~-~~~~-----~~~~~~~~V~~l~fspd-g~~l~s~s~d~~I~vwd~ 164 (432)
.|.+.+... +... ..+........++++|+ +.++++-..++.|..+|+
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 366776433 2211 22322223456788994 555555556777555554
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.07 E-value=1.7 Score=39.91 Aligned_cols=151 Identities=13% Similarity=0.057 Sum_probs=71.1
Q ss_pred CcceeeeeeecCCCceeEEEEeecCccee--eEEEccCCcCEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCee
Q psy9319 16 PSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNILKAHPVTCICIEFDPTGKYFAVGSKD-------ALVSLWDAAELTC 86 (432)
Q Consensus 16 ~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l~~h~~~V~~l~~spdg~~L~sgs~d-------g~I~iwd~~~~~~ 86 (432)
+.++ +.+..+.....-++..+|..+.+- +..+........++.+ ++.+++.|+.+ ..+.+||+.+...
T Consensus 109 ~~iy-v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLY-AVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TEEE-EEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CEEE-EEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 3444 333334433445566677655432 2112211122222222 56666666542 3588999887654
Q ss_pred EEE--EeeCCCCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEEEEecCC--ceEEEEEccCCcEEEEEECCC
Q psy9319 87 IRT--FQRLDWPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKVYDICIQA--ATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 87 ~~~--~~~h~~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~~~~~~~--~V~~l~fspdg~~l~s~s~d~ 157 (432)
... +....... ++. .-++.+++.|+.+ ..+.+||+.+.+-...-.... .-.+++ ..++.+++.|+.++
T Consensus 186 ~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 186 TYIAEMSTRRSGA-GVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDG 262 (302)
T ss_dssp EEECCCSSCCBSC-EEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCS
T ss_pred EECCCCccccccc-cEE-EECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCC
Confidence 322 11111111 222 2266677777654 368899998764332211111 111122 22677777777654
Q ss_pred eEEEEeCCceEEeecCCC
Q psy9319 158 YDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 158 ~I~vwd~~~i~vwd~~~~ 175 (432)
. -.+..+.+||+.+.
T Consensus 263 ~---~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 263 S---CNLASVEYYNPTTD 277 (302)
T ss_dssp S---SBCCCEEEEETTTT
T ss_pred C---cccccEEEEcCCCC
Confidence 3 11234566666554
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.91 E-value=2.8 Score=38.43 Aligned_cols=137 Identities=12% Similarity=0.024 Sum_probs=65.7
Q ss_pred CcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCeeEE
Q psy9319 16 PSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGSKD-----ALVSLWDAAELTCIR 88 (432)
Q Consensus 16 ~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~d-----g~I~iwd~~~~~~~~ 88 (432)
+.++ +.+..+......++..+|..+.+ .+..+........++.+ ++.+++.|+.+ ..+.+||+.+.....
T Consensus 113 ~~ly-v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 113 DMIY-VSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TEEE-EECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEE-EEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 4444 33333333334456667765543 22222222222222222 56777777654 468899988765432
Q ss_pred EEeeCCCCE-EEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEEEEecC--CceEEEEEccCCcEEEEEECCC
Q psy9319 89 TFQRLDWPV-RAISFSHDGALIASGSED-----LTIDIAHVESGKKVYDICIQ--AATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 89 ~~~~h~~~V-~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~~~~~~--~~V~~l~fspdg~~l~s~s~d~ 157 (432)
. .....+. ...+..-++.+++.|+.+ ..+.+||+.+.+-...-... ..-.+++ .-++.+++.|+.++
T Consensus 190 ~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 190 V-TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT-VLRGRLYAIAGYDG 264 (301)
T ss_dssp E-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCS
T ss_pred C-CCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE-EECCEEEEEcCcCC
Confidence 2 1111111 111122356666777653 46899999876533221111 1111222 22677777777653
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.56 E-value=1.1 Score=42.82 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=58.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEE-------eeCCCCEEEEEEeeC---CCEEEEEe-C-------C
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTF-------QRLDWPVRAISFSHD---GALIASGS-E-------D 115 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~-------~~h~~~V~~i~~spd---g~~l~sgs-~-------d 115 (432)
....++|.|+|+.|+.+...|.|.+++.. +.....+ .........++|+|+ +..|+.+. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45799999999834445567999999864 3321111 112346789999996 44454442 2 2
Q ss_pred CeEEEEeCCCC--c--EEEE-Ee-c------CCceEEEEEccCCcEEEEEEC
Q psy9319 116 LTIDIAHVESG--K--KVYD-IC-I------QAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 116 g~V~vwd~~~~--~--~~~~-~~-~------~~~V~~l~fspdg~~l~s~s~ 155 (432)
..|..|++..+ . .... +. . ......++|.|||.++++.+.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 35766766543 1 1111 11 1 112457999999976665543
No 317
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.46 E-value=2.2 Score=39.06 Aligned_cols=110 Identities=10% Similarity=0.012 Sum_probs=55.0
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEEEE
Q psy9319 63 TGKYFAVGSKD-----ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKVYDI 132 (432)
Q Consensus 63 dg~~L~sgs~d-----g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~~~ 132 (432)
++.+++.|+.+ ..+.+||+.+......-..........+...++.+++.|+.+ ..+.+||+.+..-...-
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 56677777644 368899988765432211111111111122366666776644 45889998776433221
Q ss_pred ecCCc--eEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 133 CIQAA--TFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 133 ~~~~~--V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
....+ -.+++ .-++.+++.|+.++.- ....+.+||+.+..
T Consensus 192 ~~p~~r~~~~~~-~~~~~i~v~GG~~~~~---~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 192 PMATKRSGAGVA-LLNDHIYVVGGFDGTA---HLSSVEAYNIRTDS 233 (301)
T ss_dssp CCSSCCBSCEEE-EETTEEEEECCBCSSS---BCCCEEEEETTTTE
T ss_pred CCCcccccceEE-EECCEEEEEeCCCCCc---ccceEEEEeCCCCc
Confidence 11111 11222 2256777777765321 02335556655543
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.32 E-value=7.7 Score=37.00 Aligned_cols=143 Identities=17% Similarity=0.089 Sum_probs=75.1
Q ss_pred CCCcccccccCCCCcceeeeeeecCCCceeEEEEeecCccee--eEEE----ccCCcCEEEEEEcCC---CCEEEEE-e-
Q psy9319 3 GQNFIPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNIL----KAHPVTCICIEFDPT---GKYFAVG-S- 71 (432)
Q Consensus 3 g~n~I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l----~~h~~~V~~l~~spd---g~~L~sg-s- 71 (432)
|.+.-..++|.|++.++ ++-. ....|...+..++.. +..+ ....+....++|+|+ +..|+.. +
T Consensus 30 gL~~P~~ia~~pdG~ll-Vter-----~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLL-VSSR-----DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp CCSSEEEEEECTTSCEE-EEET-----TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred CCCCceEEEEcCCCcEE-EEEe-----cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 34455778899999876 4421 133445455444432 2222 123466889999995 3444432 2
Q ss_pred -CCCeEEEEeCCCC----------eeEE-EEee-CCCCEEEEEEeeCCCEEEEEeC-------------CCeEEEEeCCC
Q psy9319 72 -KDALVSLWDAAEL----------TCIR-TFQR-LDWPVRAISFSHDGALIASGSE-------------DLTIDIAHVES 125 (432)
Q Consensus 72 -~dg~I~iwd~~~~----------~~~~-~~~~-h~~~V~~i~~spdg~~l~sgs~-------------dg~V~vwd~~~ 125 (432)
.++.|.-|.+..+ +.+. .+.. .......|.|.|||.+.++.+. .|.|.-.+...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 3456666655431 1111 1211 1112356999999987666442 24555555542
Q ss_pred C---------cEEEEEecCCceEEEEEccCCcEEEE
Q psy9319 126 G---------KKVYDICIQAATFTVAWHPKQYLLAY 152 (432)
Q Consensus 126 ~---------~~~~~~~~~~~V~~l~fspdg~~l~s 152 (432)
. ..+....+. ....++|+|+|.++++
T Consensus 184 ~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 2 123333232 3457889998765554
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.15 E-value=3 Score=38.58 Aligned_cols=114 Identities=9% Similarity=0.022 Sum_probs=56.1
Q ss_pred CCCCEEEEEeC-C-----CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCC-----eEEEEeCCCCcEEE
Q psy9319 62 PTGKYFAVGSK-D-----ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDL-----TIDIAHVESGKKVY 130 (432)
Q Consensus 62 pdg~~L~sgs~-d-----g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg-----~V~vwd~~~~~~~~ 130 (432)
.++.+++.|+. + ..+.+||+.+......-.-........+..-++.+++.|+.++ .+.+||+.+.+-..
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 35667777765 2 4688999887643221111111111111223667777776543 58889988764332
Q ss_pred EEecC--CceEEEEEccCCcEEEEEECCC------eEEEEeCCceEEeecCCCc
Q psy9319 131 DICIQ--AATFTVAWHPKQYLLAYACDDK------YDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 131 ~~~~~--~~V~~l~fspdg~~l~s~s~d~------~I~vwd~~~i~vwd~~~~~ 176 (432)
.-..+ ..-.+++. -++.+++.|+.++ ....-.+..+.+||+.+..
T Consensus 227 ~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 227 FEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 21111 11112222 2567777777642 1111122336667766544
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.95 E-value=5.5 Score=37.14 Aligned_cols=113 Identities=6% Similarity=-0.034 Sum_probs=67.5
Q ss_pred eeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEe----CCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCC
Q psy9319 31 QLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGS----KDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDG 106 (432)
Q Consensus 31 ~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs----~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg 106 (432)
...|+..+....... .+... . +..|++++.+|+-.. ....|...++.. .....+..+.. .+|+|++
T Consensus 87 ~~~Iy~i~~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 87 RNSLCRIKRNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp SEEEEEEETTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEET
T ss_pred CCeEEEEeCCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEEC
Confidence 345555555444322 23221 1 236788888888765 344566667764 33445554433 4578889
Q ss_pred CEEEEEeC-CCeEEEEeCCCCcEEEEEecCCceEEEEEccCCcEEEEEECC
Q psy9319 107 ALIASGSE-DLTIDIAHVESGKKVYDICIQAATFTVAWHPKQYLLAYACDD 156 (432)
Q Consensus 107 ~~l~sgs~-dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d 156 (432)
..|+-.+. ...|.+.++..+.....+. +... ..++|++.+|+....+
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred CEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 88887665 6789999987665443332 3332 3466988888877644
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.94 E-value=6.4 Score=36.67 Aligned_cols=131 Identities=8% Similarity=-0.084 Sum_probs=72.2
Q ss_pred ccccccCCCCcceeeeeeecCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCCCCEEEEEeCC-------------
Q psy9319 7 IPLLGLNPRPSLYQSSVLTDISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPTGKYFAVGSKD------------- 73 (432)
Q Consensus 7 I~~l~~~p~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spdg~~L~sgs~d------------- 73 (432)
.+..-+++++..+..+...|. ..++..+. +|.....+... .+--++++|.+|+.+...
T Consensus 16 ~n~g~~~~~g~~iy~~n~~d~----~~ly~~~~-dg~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n 86 (302)
T 3s25_A 16 YNAGLFCESDGEVFFSNTNDN----GRLYAMNI-DGSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYD 86 (302)
T ss_dssp GGTTCEEEETTEEEEEEGGGT----TEEEEEET-TSCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCC
T ss_pred ecceEEEEeCCEEEEEeCCCC----ceEEEEcC-CCCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccC
Confidence 344444555555544433332 23333333 33333344332 234568889988777543
Q ss_pred -CeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEe----CCCeEEEEeCCCCcEEEEEecCCceEEEEEccCCc
Q psy9319 74 -ALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGS----EDLTIDIAHVESGKKVYDICIQAATFTVAWHPKQY 148 (432)
Q Consensus 74 -g~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs----~dg~V~vwd~~~~~~~~~~~~~~~V~~l~fspdg~ 148 (432)
..|+..++..+.. ..+... . +..|+|++.+|+-.. .+..|...++..........+.. .+|+|++.
T Consensus 87 ~~~Iy~i~~dg~~~-~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 87 RNSLCRIKRNGHGS-TVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp SEEEEEEETTSCCC-EEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETT
T ss_pred CCeEEEEeCCCCcc-eEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECC
Confidence 3677888876543 233222 2 236888999888775 34567777776544333222322 45688888
Q ss_pred EEEEEEC
Q psy9319 149 LLAYACD 155 (432)
Q Consensus 149 ~l~s~s~ 155 (432)
.|+..+.
T Consensus 158 ~iy~t~~ 164 (302)
T 3s25_A 158 YFYYNNP 164 (302)
T ss_dssp EEEEECT
T ss_pred EEEEEeC
Confidence 8887765
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.79 E-value=2.3 Score=40.62 Aligned_cols=138 Identities=11% Similarity=0.070 Sum_probs=70.7
Q ss_pred cccccccCCCCc-ceeeeeeecCCCceeEEEEeecCcceee---EEE----ccCCcCEEEEEEcCC---CCEEEEE-eC-
Q psy9319 6 FIPLLGLNPRPS-LYQSSVLTDISPKQLDFKFKEHHKLEEQ---NIL----KAHPVTCICIEFDPT---GKYFAVG-SK- 72 (432)
Q Consensus 6 ~I~~l~~~p~~~-~l~~s~s~D~~~~~~~i~~~d~~~~~~~---~~l----~~h~~~V~~l~~spd---g~~L~sg-s~- 72 (432)
.-..++|.|++. ++ ++.. . ..|.+.+. .+... ..+ ....+....++|+|+ +..|+.+ +.
T Consensus 19 ~P~~i~~~pdG~~l~-V~e~-~-----G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 19 HPWALAFLPDNHGML-ITLR-G-----GELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp SEEEEEECSTTCCEE-EEET-T-----TEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred CcEEEEEcCCCCEEE-EEeC-C-----ceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC
Confidence 346788999998 66 4422 1 23444443 23221 111 122345789999995 4444433 32
Q ss_pred ------CCeEEEEeCCCC--e--eEEE-EeeC------CCCEEEEEEeeCCCEEEEEeC-------------CCeEEEEe
Q psy9319 73 ------DALVSLWDAAEL--T--CIRT-FQRL------DWPVRAISFSHDGALIASGSE-------------DLTIDIAH 122 (432)
Q Consensus 73 ------dg~I~iwd~~~~--~--~~~~-~~~h------~~~V~~i~~spdg~~l~sgs~-------------dg~V~vwd 122 (432)
...|..|++... . .... +... ......+.|.|||.+.++.+. .|.|.-++
T Consensus 91 ~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 91 GDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp CSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 235666666432 1 1111 2111 012357999999965554432 24677777
Q ss_pred CCCC--------------cEEEEEecCCceEEEEEcc-CCcEEEE
Q psy9319 123 VESG--------------KKVYDICIQAATFTVAWHP-KQYLLAY 152 (432)
Q Consensus 123 ~~~~--------------~~~~~~~~~~~V~~l~fsp-dg~~l~s 152 (432)
.... ..+.... ......++|+| +|.++++
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a~G-~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWSYG-IRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEEEC-CSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCCCCcCCCCCCccEEEEc-CcCccceEEECCCCCEEEE
Confidence 6532 1122222 23467899999 5655544
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.70 E-value=1.8 Score=45.63 Aligned_cols=161 Identities=12% Similarity=0.006 Sum_probs=76.7
Q ss_pred CCcceeeeeeecCCCceeEEEEeecCcc--eeeEEEccCCcCEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCeeEEEE
Q psy9319 15 RPSLYQSSVLTDISPKQLDFKFKEHHKL--EEQNILKAHPVTCICIEFDPTGKYFAVGSKDA--LVSLWDAAELTCIRTF 90 (432)
Q Consensus 15 ~~~~l~~s~s~D~~~~~~~i~~~d~~~~--~~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg--~I~iwd~~~~~~~~~~ 90 (432)
++.++++.+........-++.++|..+. ..+..+........++ .-.++.+++.|+.++ .+.+||+.+......-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~-~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSAC-SLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEE-ECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEE-EEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 5555544443332212334555665553 2222222212222222 224788888887655 6899999876543221
Q ss_pred e-----eCCCCEEEEEEeeC-CCEEEEEeC--C-----CeEEEEeCCCCcE-----EEEEec----CCceEEEEEccCCc
Q psy9319 91 Q-----RLDWPVRAISFSHD-GALIASGSE--D-----LTIDIAHVESGKK-----VYDICI----QAATFTVAWHPKQY 148 (432)
Q Consensus 91 ~-----~h~~~V~~i~~spd-g~~l~sgs~--d-----g~V~vwd~~~~~~-----~~~~~~----~~~V~~l~fspdg~ 148 (432)
. .......++.+..+ +.+++.|+. + ..+.+||+.+..- ...+.. ...-.+++...++.
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK 609 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE
Confidence 1 01112223445554 566666664 2 4688999988771 222211 11112233333377
Q ss_pred EEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 149 LLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 149 ~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
+++.|+.++.-..-....+.+||+.+..
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 7777775422100112345556655543
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.35 E-value=3.5 Score=37.81 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=52.6
Q ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeEEEEeeCCCC--EEEEEEeeCCCEEEEEeCC-------CeEEEEeCCCCcE
Q psy9319 63 TGKYFAVGSKDA-----LVSLWDAAELTCIRTFQRLDWP--VRAISFSHDGALIASGSED-------LTIDIAHVESGKK 128 (432)
Q Consensus 63 dg~~L~sgs~dg-----~I~iwd~~~~~~~~~~~~h~~~--V~~i~~spdg~~l~sgs~d-------g~V~vwd~~~~~~ 128 (432)
++.+++.|+.++ .+.+||+.+...... .....+ -.+++ .-++.+++.|+.+ ..+.+||+.+..-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVG-VVGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEE-EETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-CCCCCcccCceEE-EECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566777776553 578889887654322 111111 11222 2256666666532 3588999877643
Q ss_pred EEEEe--cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCC
Q psy9319 129 VYDIC--IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 129 ~~~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
...-. ....-.+++. -++.+++.|+.++.. ....+.+||+.++
T Consensus 186 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~---~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPL---VRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCBSSSS---BCCCEEEEETTTT
T ss_pred EECCCCccccccccEEE-ECCEEEEECCCCCCc---ccceEEEEeCCCC
Confidence 32211 1111112222 257777777765420 1223555555543
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.34 E-value=3 Score=38.35 Aligned_cols=139 Identities=9% Similarity=0.016 Sum_probs=64.9
Q ss_pred eeEEEEeecCccee--eEEEccCCcCEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCeeEEEEeeCCCCEEEEEE
Q psy9319 31 QLDFKFKEHHKLEE--QNILKAHPVTCICIEFDPTGKYFAVGSKD------ALVSLWDAAELTCIRTFQRLDWPVRAISF 102 (432)
Q Consensus 31 ~~~i~~~d~~~~~~--~~~l~~h~~~V~~l~~spdg~~L~sgs~d------g~I~iwd~~~~~~~~~~~~h~~~V~~i~~ 102 (432)
.-++..+|..+.+- +..+........++.+ ++.+++.|+.+ ..+.+||+.+......-..........+.
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 146 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV 146 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE
Confidence 34566667665432 2222221122222222 56677777755 46889998876543221111111111112
Q ss_pred eeCCCEEEEEeC---------CCeEEEEeCCCCcEEEEEecCCc--eEEEEEccCCcEEEEEECCCeEEEEeCCceEEee
Q psy9319 103 SHDGALIASGSE---------DLTIDIAHVESGKKVYDICIQAA--TFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFG 171 (432)
Q Consensus 103 spdg~~l~sgs~---------dg~V~vwd~~~~~~~~~~~~~~~--V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd 171 (432)
.-++.+++.|+. -..+.+||+.+..-...-....+ -.+++.. ++.+++.|+.++. -.+..+.+||
T Consensus 147 ~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~---~~~~~~~~yd 222 (306)
T 3ii7_A 147 EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGL---GGLDNVEYYD 222 (306)
T ss_dssp EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETT---EEBCCEEEEE
T ss_pred EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCC---CCCceEEEee
Confidence 236666666653 34588999987743222111111 1122222 5677777765432 0123455566
Q ss_pred cCCC
Q psy9319 172 FLPE 175 (432)
Q Consensus 172 ~~~~ 175 (432)
+.+.
T Consensus 223 ~~~~ 226 (306)
T 3ii7_A 223 IKLN 226 (306)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 5554
No 326
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.74 E-value=14 Score=35.10 Aligned_cols=146 Identities=8% Similarity=0.051 Sum_probs=91.0
Q ss_pred ccCCCCcceeeeeee--cCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcC--CC-CEEEEEeC---CCeEEEEeCC
Q psy9319 11 GLNPRPSLYQSSVLT--DISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDP--TG-KYFAVGSK---DALVSLWDAA 82 (432)
Q Consensus 11 ~~~p~~~~l~~s~s~--D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~sp--dg-~~L~sgs~---dg~I~iwd~~ 82 (432)
..+++...++..|.. ++.+ .+.+++++.+. +..+.++||.+....+.+.. .. .+|+.+.. .+.+.|-++.
T Consensus 158 ~~d~~~kW~~l~GI~~~~~~v-~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~ 235 (365)
T 2xzh_A 158 RTDAKQKWLLLTGISAQQNRV-VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 235 (365)
T ss_dssp EECTTSCEEEEEEEEEETTEE-EEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECS
T ss_pred EECCCCCEEEEEeEeccCCcc-ceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcC
Confidence 346666666555543 3333 47788887654 45678899976554443322 11 23443332 2578888874
Q ss_pred CC---e------eEEEEeeC---CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcE
Q psy9319 83 EL---T------CIRTFQRL---DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYL 149 (432)
Q Consensus 83 ~~---~------~~~~~~~h---~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~ 149 (432)
.. . .+..+... ....-++..|+....++.-+.-|.|.+||+.+|.++..-. ...+|...+-+..+.-
T Consensus 236 ~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~G 315 (365)
T 2xzh_A 236 TPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAG 315 (365)
T ss_dssp SCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTE
T ss_pred CCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCc
Confidence 32 1 11222222 3445678888888889999999999999999999998877 5556666555554444
Q ss_pred EEEEECCCe
Q psy9319 150 LAYACDDKY 158 (432)
Q Consensus 150 l~s~s~d~~ 158 (432)
++.....|.
T Consensus 316 i~~Vnr~Gq 324 (365)
T 2xzh_A 316 IIGVNRKGQ 324 (365)
T ss_dssp EEEEETTCE
T ss_pred EEEEcCCCE
Confidence 555567776
No 327
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.26 E-value=3 Score=38.28 Aligned_cols=152 Identities=9% Similarity=0.036 Sum_probs=69.9
Q ss_pred CCcceeeeeeecCCCceeEEEEeecCccee--eEEEccCCcCEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCC
Q psy9319 15 RPSLYQSSVLTDISPKQLDFKFKEHHKLEE--QNILKAHPVTCICIEFDPTGKYFAVGSK---------DALVSLWDAAE 83 (432)
Q Consensus 15 ~~~~l~~s~s~D~~~~~~~i~~~d~~~~~~--~~~l~~h~~~V~~l~~spdg~~L~sgs~---------dg~I~iwd~~~ 83 (432)
++.++++.+.........++..+|..+..- +..+........++. -++.+++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 344444443321333344566666655432 211211111222222 25666666653 34588999987
Q ss_pred CeeEEEEeeCCCC--EEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEEEEecC---CceEEEEEccCCcEEEEE
Q psy9319 84 LTCIRTFQRLDWP--VRAISFSHDGALIASGSED-----LTIDIAHVESGKKVYDICIQ---AATFTVAWHPKQYLLAYA 153 (432)
Q Consensus 84 ~~~~~~~~~h~~~--V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~~~~~~---~~V~~l~fspdg~~l~s~ 153 (432)
...... .....+ -.++. .-++.+++.|+.+ ..+.+||+.+.+-...-..+ .....+.+ ++.+++.|
T Consensus 179 ~~W~~~-~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 254 (306)
T 3ii7_A 179 ETWTEL-CPMIEARKNHGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLA 254 (306)
T ss_dssp TEEEEE-CCCSSCCBSCEEE-EETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEE
T ss_pred CeEEEC-CCccchhhcceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEe
Confidence 654322 111111 11222 2256666666543 45889998776422211111 11222333 67788888
Q ss_pred ECCCeEEEEeCCceEEeecCCC
Q psy9319 154 CDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 154 s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
+.++.- .+..+.+||+.+.
T Consensus 255 G~~~~~---~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 255 GFQGVG---RLGHILEYNTETD 273 (306)
T ss_dssp CBCSSS---BCCEEEEEETTTT
T ss_pred CcCCCe---eeeeEEEEcCCCC
Confidence 755321 1223555665554
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.33 E-value=21 Score=35.29 Aligned_cols=146 Identities=8% Similarity=0.049 Sum_probs=92.7
Q ss_pred ccCCCCcceeeeeee--cCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEcCC---CCEEEEEeCC---CeEEEEeCC
Q psy9319 11 GLNPRPSLYQSSVLT--DISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFDPT---GKYFAVGSKD---ALVSLWDAA 82 (432)
Q Consensus 11 ~~~p~~~~l~~s~s~--D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~spd---g~~L~sgs~d---g~I~iwd~~ 82 (432)
..+++...++..|.. ++.+ .+.+++++.+. +..+.+.||.+....+.+..+ ..+++.+... +.+.|-++.
T Consensus 157 ~~d~~~kW~~l~GI~~~~~~v-~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~ 234 (494)
T 1bpo_A 157 RTDAKQKWLLLTGISAQQNRV-VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 234 (494)
T ss_dssp EECTTSSEEEEEEEEEETTEE-EEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECS
T ss_pred EECCCCCeEEEEeecccCCcc-cceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcC
Confidence 346666666555442 3322 47778887654 456788999776655544322 1244444443 688888875
Q ss_pred CC---ee------EEEEeeC---CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcE
Q psy9319 83 EL---TC------IRTFQRL---DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYL 149 (432)
Q Consensus 83 ~~---~~------~~~~~~h---~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~ 149 (432)
.. .. +..+... .....++..|+....++..+.-|.|.++|+.+|.++..-. ...+|...+.+....-
T Consensus 235 ~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~G 314 (494)
T 1bpo_A 235 TPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAG 314 (494)
T ss_dssp CCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTE
T ss_pred CCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCc
Confidence 32 11 1111111 3446678889988899999999999999999999998777 5556666555555445
Q ss_pred EEEEECCCe
Q psy9319 150 LAYACDDKY 158 (432)
Q Consensus 150 l~s~s~d~~ 158 (432)
++.....|.
T Consensus 315 i~~Vnr~Gq 323 (494)
T 1bpo_A 315 IIGVNRKGQ 323 (494)
T ss_dssp EEEEETTCE
T ss_pred EEEEccCce
Confidence 555567776
No 329
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.23 E-value=0.66 Score=47.23 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=51.4
Q ss_pred CCEEEEEEeeCCCEEEEEe-CCCeEEEEeCCC------Cc-------EEEEEecCCceEEEEEccCCcEEEEEECCCeEE
Q psy9319 95 WPVRAISFSHDGALIASGS-EDLTIDIAHVES------GK-------KVYDICIQAATFTVAWHPKQYLLAYACDDKYDR 160 (432)
Q Consensus 95 ~~V~~i~~spdg~~l~sgs-~dg~V~vwd~~~------~~-------~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~ 160 (432)
.....+.++|||++++.++ .+.+|.++|+.. +. ........-.....+|+++|....+..-|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 4556789999999988776 688999999873 11 133344556678899999996555666899966
Q ss_pred EEeC
Q psy9319 161 KQDC 164 (432)
Q Consensus 161 vwd~ 164 (432)
-|++
T Consensus 403 kWni 406 (638)
T 3sbq_A 403 KWNM 406 (638)
T ss_dssp EEEH
T ss_pred EEec
Confidence 6665
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.09 E-value=3.9 Score=37.70 Aligned_cols=108 Identities=9% Similarity=0.073 Sum_probs=54.8
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeEEE--EeeCCCCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEE
Q psy9319 63 TGKYFAVGSKD-----ALVSLWDAAELTCIRT--FQRLDWPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKVY 130 (432)
Q Consensus 63 dg~~L~sgs~d-----g~I~iwd~~~~~~~~~--~~~h~~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~ 130 (432)
++.+++.|+.+ ..+.+||+.+...... +.........+. -++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 56677777654 4588999886653221 111111112222 266666777654 468999998764322
Q ss_pred EEecC--CceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCCc
Q psy9319 131 DICIQ--AATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPEP 176 (432)
Q Consensus 131 ~~~~~--~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~ 176 (432)
.-... ..-.+++. -++.+++.|+.++.- .+..+.+||+.+..
T Consensus 246 ~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~---~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 246 VAPMKHRRSALGITV-HQGRIYVLGGYDGHT---FLDSVECYDPDTDT 289 (308)
T ss_dssp CCCCSSCCBSCEEEE-ETTEEEEECCBCSSC---BCCEEEEEETTTTE
T ss_pred CCCCCCCccceEEEE-ECCEEEEEcCcCCCc---ccceEEEEcCCCCE
Confidence 11111 11112222 256777777755420 12335666665543
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.83 E-value=1.4 Score=42.12 Aligned_cols=110 Identities=9% Similarity=-0.032 Sum_probs=66.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEEeeC-CCCEEEEEE--eeCCCEEEEE--eCCCeEEEEeCCCCcEEEEEecC----
Q psy9319 65 KYFAVGSKDALVSLWDAAELTCIRTFQRL-DWPVRAISF--SHDGALIASG--SEDLTIDIAHVESGKKVYDICIQ---- 135 (432)
Q Consensus 65 ~~L~sgs~dg~I~iwd~~~~~~~~~~~~h-~~~V~~i~~--spdg~~l~sg--s~dg~V~vwd~~~~~~~~~~~~~---- 135 (432)
..++.++.||.|.-+|..+|+..-.+... ..++....- .+.+..++.+ +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46788899999999999999988777643 122221110 0112234433 58999999999888655544421
Q ss_pred -CceEE---EEE-cc----CCcEEEEEECCCeEEEEeCCceEEeecCCCceeeeec
Q psy9319 136 -AATFT---VAW-HP----KQYLLAYACDDKYDRKQDCGNLKVFGFLPEPIKKRKR 182 (432)
Q Consensus 136 -~~V~~---l~f-sp----dg~~l~s~s~d~~I~vwd~~~i~vwd~~~~~~~~~~~ 182 (432)
+++.. ... .+ .+..+++|+.++. +...|+.+|+.+-.+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~--------l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI--------MYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEE--------EEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCE--------EEEEECCCCcEEEEEe
Confidence 22221 001 01 3556788888988 6666667776666554
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.51 E-value=30 Score=38.66 Aligned_cols=97 Identities=11% Similarity=0.007 Sum_probs=62.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEE-eeCCCCEEEEEEeeC------CCEEEEEeC-CCeEEEEeCCCCcEEEEEec--
Q psy9319 65 KYFAVGSKDALVSLWDAAELTCIRTF-QRLDWPVRAISFSHD------GALIASGSE-DLTIDIAHVESGKKVYDICI-- 134 (432)
Q Consensus 65 ~~L~sgs~dg~I~iwd~~~~~~~~~~-~~h~~~V~~i~~spd------g~~l~sgs~-dg~V~vwd~~~~~~~~~~~~-- 134 (432)
.+++.++ .+.+.++.+..+...... ......|.|+++.|. +.+++.|.. |++|+|+++.+.+.+.....
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Confidence 3455554 567777776655432111 124568999999863 469999997 99999999988777665443
Q ss_pred CCceEEEEEcc--CCcEEEEEECCCeEEEE
Q psy9319 135 QAATFTVAWHP--KQYLLAYACDDKYDRKQ 162 (432)
Q Consensus 135 ~~~V~~l~fsp--dg~~l~s~s~d~~I~vw 162 (432)
...+.++.+.. ...+|..|-.||.+.-+
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 23445554432 34678888899985433
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.24 E-value=34 Score=38.20 Aligned_cols=90 Identities=9% Similarity=0.013 Sum_probs=58.9
Q ss_pred eEEEEeCCCCeeEEEEeeCC-CCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEE--EEEecCCceEEEEEccC-----
Q psy9319 75 LVSLWDAAELTCIRTFQRLD-WPVRAISFSHDGALIASGSEDLTIDIAHVESGKKV--YDICIQAATFTVAWHPK----- 146 (432)
Q Consensus 75 ~I~iwd~~~~~~~~~~~~h~-~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~--~~~~~~~~V~~l~fspd----- 146 (432)
.|++.+...+..+..+.... ..|...+.+ +..++.++ ++.+.++.+..++.. ........|.|+++.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 46677765555555665332 346655544 34566665 577888887765432 22336678999999863
Q ss_pred -CcEEEEEEC-CCeEEEEeCCce
Q psy9319 147 -QYLLAYACD-DKYDRKQDCGNL 167 (432)
Q Consensus 147 -g~~l~s~s~-d~~I~vwd~~~i 167 (432)
+.+++.|.. |++|+|+++..+
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTC
T ss_pred cccEEEEEECCCCEEEEEECCCC
Confidence 479999996 999999987653
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.04 E-value=11 Score=34.75 Aligned_cols=94 Identities=11% Similarity=0.128 Sum_probs=46.7
Q ss_pred CCCCEEEEEeC------CCeEEEEeCCCCeeEEEEeeCC-CCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEE
Q psy9319 62 PTGKYFAVGSK------DALVSLWDAAELTCIRTFQRLD-WPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKV 129 (432)
Q Consensus 62 pdg~~L~sgs~------dg~I~iwd~~~~~~~~~~~~h~-~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~ 129 (432)
.++.+++.|+. -..+.+||+.+......-.... ..-.+++ .-++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 35666666653 2358899998765432211111 1111222 2366666776543 35778998876532
Q ss_pred EEEecCCc--eEEEEEccCCcEEEEEECCC
Q psy9319 130 YDICIQAA--TFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 130 ~~~~~~~~--V~~l~fspdg~~l~s~s~d~ 157 (432)
..-..+.+ -.+++ ..++.+++.|+.+.
T Consensus 236 ~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 236 VMTEFPQERSSISLV-SLAGSLYAIGGFAM 264 (318)
T ss_dssp ECCCCSSCCBSCEEE-EETTEEEEECCBCC
T ss_pred ECCCCCCcccceEEE-EECCEEEEECCeec
Confidence 22111111 11222 23567777776543
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.80 E-value=19 Score=39.22 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=33.4
Q ss_pred CEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe
Q psy9319 96 PVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 96 ~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~ 133 (432)
.+.+++..++..++++-|.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777778888899999999999999999999988763
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.53 E-value=5.3 Score=40.71 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=66.4
Q ss_pred EEEEEcCCCCEEEEEe-CCCeEEEEeCCCC------e------e-EEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy9319 56 ICIEFDPTGKYFAVGS-KDALVSLWDAAEL------T------C-IRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIA 121 (432)
Q Consensus 56 ~~l~~spdg~~L~sgs-~dg~I~iwd~~~~------~------~-~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vw 121 (432)
..+.++|||++++.++ .+.+|.++|+... + + +.... -.-.....+|.++|....|.--|..|.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEE
Confidence 3677899999987655 4778999998731 1 1 11222 33456788999999544445579999999
Q ss_pred eCCCC----------cEEEEEecCCceEEEEE------ccCCcEEEEEECCC
Q psy9319 122 HVESG----------KKVYDICIQAATFTVAW------HPKQYLLAYACDDK 157 (432)
Q Consensus 122 d~~~~----------~~~~~~~~~~~V~~l~f------spdg~~l~s~s~d~ 157 (432)
++... ..+..+.....+-.+.- .|+|++|++...=.
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~s 456 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFS 456 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCC
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccc
Confidence 98642 34555553334444433 57899999986533
No 337
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.92 E-value=12 Score=37.07 Aligned_cols=105 Identities=11% Similarity=0.118 Sum_probs=61.2
Q ss_pred cCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCe---eEEEEe---------eCCCCEEEEEEeeC----CCEEEEEeC-
Q psy9319 53 VTCICIEFDPTGK-YFAVGSKDALVSLWDAAELT---CIRTFQ---------RLDWPVRAISFSHD----GALIASGSE- 114 (432)
Q Consensus 53 ~~V~~l~~spdg~-~L~sgs~dg~I~iwd~~~~~---~~~~~~---------~h~~~V~~i~~spd----g~~l~sgs~- 114 (432)
...+.++|.|+|. .|+.+...|.|++++..... .+..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 34455678999999764321 222221 11456889999996 333333221
Q ss_pred -C----------CeEEEEeCCC----------CcEEEEEe---cCCceEEEEEccCCcEEEEEECCC
Q psy9319 115 -D----------LTIDIAHVES----------GKKVYDIC---IQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 115 -d----------g~V~vwd~~~----------~~~~~~~~---~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
+ ..|.-|.+.. .+.+..+. .......|+|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1444465532 12233332 233467899999998777766544
No 338
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.46 E-value=3.3 Score=38.18 Aligned_cols=107 Identities=15% Similarity=0.072 Sum_probs=51.9
Q ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeEEE--EeeCCCCEEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCcEEE
Q psy9319 63 TGKYFAVGSKD-----ALVSLWDAAELTCIRT--FQRLDWPVRAISFSHDGALIASGSED-----LTIDIAHVESGKKVY 130 (432)
Q Consensus 63 dg~~L~sgs~d-----g~I~iwd~~~~~~~~~--~~~h~~~V~~i~~spdg~~l~sgs~d-----g~V~vwd~~~~~~~~ 130 (432)
++.+++.|+.+ ..+.+||+.+...... +.........+. -++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56666766543 3688899887653221 111111111222 256666666644 458899987764322
Q ss_pred EEe--cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCC
Q psy9319 131 DIC--IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 131 ~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
.-. ....-.+++.. ++.+++.|+.++.- ....+.+||+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL-HNCIYAAGGYDGQD---QLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEE-TTEEEEECCBCSSS---BCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEE-CCEEEEEeCCCCCC---ccceEEEEeCCCC
Confidence 111 11111122222 56777777655320 1233555555543
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.77 E-value=11 Score=39.34 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=49.9
Q ss_pred EEEEcCC-CCEEEEEeC--C-----CeEEEEeCCCCee-----EEEEee---CCCCEEEEEEeeCCCEEEEEeC------
Q psy9319 57 CIEFDPT-GKYFAVGSK--D-----ALVSLWDAAELTC-----IRTFQR---LDWPVRAISFSHDGALIASGSE------ 114 (432)
Q Consensus 57 ~l~~spd-g~~L~sgs~--d-----g~I~iwd~~~~~~-----~~~~~~---h~~~V~~i~~spdg~~l~sgs~------ 114 (432)
++.+..+ +.+++.|+. + ..+.+||+.+... -..+.. ....-.++....++.+++.|+.
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCC
Confidence 3555554 667777765 2 4588999887651 112211 1111122333333677777763
Q ss_pred --CCeEEEEeCCCCcEEEEEecCCce----------EEEEEccCCcEEEEEEC
Q psy9319 115 --DLTIDIAHVESGKKVYDICIQAAT----------FTVAWHPKQYLLAYACD 155 (432)
Q Consensus 115 --dg~V~vwd~~~~~~~~~~~~~~~V----------~~l~fspdg~~l~s~s~ 155 (432)
...|.+||+.+..-. ........ .+++..++|.+++.||.
T Consensus 623 ~~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 623 DRTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp CTTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 245899999877543 22211111 23444456677777764
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.44 E-value=5.9 Score=37.71 Aligned_cols=103 Identities=10% Similarity=-0.008 Sum_probs=61.2
Q ss_pred EEEEeecCcceeeEEEccC-CcCEEEEEE--cC-CCCEEEEE-eCCCeEEEEeCCCCeeEEEEee----CCCCEEE---E
Q psy9319 33 DFKFKEHHKLEEQNILKAH-PVTCICIEF--DP-TGKYFAVG-SKDALVSLWDAAELTCIRTFQR----LDWPVRA---I 100 (432)
Q Consensus 33 ~i~~~d~~~~~~~~~l~~h-~~~V~~l~~--sp-dg~~L~sg-s~dg~I~iwd~~~~~~~~~~~~----h~~~V~~---i 100 (432)
.+...|..+|+....+... ..++....- .+ ++..++.. +.||.|..++..+|.....+.. ...++.. .
T Consensus 21 ~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~p 100 (339)
T 2be1_A 21 GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNI 100 (339)
T ss_dssp CEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC-
T ss_pred eEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCc
Confidence 3455566778887777654 122222110 01 22333333 5899999999988855443331 1222321 0
Q ss_pred EE-----eeCCCEEEEEeCCCeEEEEeCCCCcEEEEEecC
Q psy9319 101 SF-----SHDGALIASGSEDLTIDIAHVESGKKVYDICIQ 135 (432)
Q Consensus 101 ~~-----spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~~~ 135 (432)
.. +..+..+++|+.+|.+...|+.+|+.+..+...
T Consensus 101 vv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 101 VVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp ---------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 00 013557889999999999999999999998643
No 341
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=76.11 E-value=4.1 Score=22.10 Aligned_cols=19 Identities=26% Similarity=0.193 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy9319 377 ARQAEKLGKRLERERNLGV 395 (432)
Q Consensus 377 ~~~~~~l~~~~~r~~~l~~ 395 (432)
...|+||+.-.+|.++|.+
T Consensus 4 delykeledlqerlrklrk 22 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4579999999999888865
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=75.57 E-value=13 Score=34.15 Aligned_cols=70 Identities=7% Similarity=-0.012 Sum_probs=34.9
Q ss_pred CCcceeeeeeecCCCceeEEEEeecCcce--eeEEEccCCcCEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCee
Q psy9319 15 RPSLYQSSVLTDISPKQLDFKFKEHHKLE--EQNILKAHPVTCICIEFDPTGKYFAVGSKDA-----LVSLWDAAELTC 86 (432)
Q Consensus 15 ~~~~l~~s~s~D~~~~~~~i~~~d~~~~~--~~~~l~~h~~~V~~l~~spdg~~L~sgs~dg-----~I~iwd~~~~~~ 86 (432)
++.++++.+..+.....-++..+|..+.+ .+..+........++.+ ++.+++.|+.++ .+.+||+.+...
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 34445444432433334456666665442 22222211122222222 567777777654 588899887654
No 343
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=74.98 E-value=58 Score=30.89 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=80.5
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC-CcEEEEEe----
Q psy9319 59 EFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVES-GKKVYDIC---- 133 (432)
Q Consensus 59 ~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~-~~~~~~~~---- 133 (432)
-.+|....||--. ..++.|||+++...+..+. ....|.--.|-.+. .|+..+ +..|+-|++.. ..++..+.
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGG
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchh
Confidence 3588888777665 6789999999988887776 34578888887554 454444 45799999975 35555554
Q ss_pred -cCCceEEEEEccCCcEEEEEEC---CCeEEEEeCCceEEeecCCCceeeeecCCC
Q psy9319 134 -IQAATFTVAWHPKQYLLAYACD---DKYDRKQDCGNLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 134 -~~~~V~~l~fspdg~~l~s~s~---d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ 185 (432)
....|.....+++.++++..+- ++.| .+.+.+|..+. ...+.+.||.
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v----~G~mQLYS~er-~~sQ~ieGha 199 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRV----VGAMQLYSVDR-KVSQPIEGHA 199 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEE----EEEEEEEETTT-TEEEEECCSE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCcc----ceeEEEEeecc-cccceeeeee
Confidence 2455778888999988776553 4432 24577777764 4445566664
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=74.19 E-value=25 Score=40.09 Aligned_cols=146 Identities=8% Similarity=0.049 Sum_probs=84.0
Q ss_pred ccCCCCcceeeeeee--cCCCceeEEEEeecCcceeeEEEccCCcCEEEEEEc--CCC-CEEEEEeC---CCeEEEEeCC
Q psy9319 11 GLNPRPSLYQSSVLT--DISPKQLDFKFKEHHKLEEQNILKAHPVTCICIEFD--PTG-KYFAVGSK---DALVSLWDAA 82 (432)
Q Consensus 11 ~~~p~~~~l~~s~s~--D~~~~~~~i~~~d~~~~~~~~~l~~h~~~V~~l~~s--pdg-~~L~sgs~---dg~I~iwd~~ 82 (432)
..+++...++..|.. ++.+ .+.+++++... +..+.+.||.+....+... +.. ..++.+.. .+.+.|-++.
T Consensus 157 ~~d~~~kW~~l~gi~~~~~~v-~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~ 234 (1630)
T 1xi4_A 157 RTDAKQKWLLLTGISAQQNRV-VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVG 234 (1630)
T ss_pred eeCCCCCeEEEEeeccCCCcc-cceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecC
Confidence 345666666555442 3333 36777776643 3556778887766555543 222 23333322 2678888875
Q ss_pred CC---ee------EEEEeeC---CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe-cCCceEEEEEccCCcE
Q psy9319 83 EL---TC------IRTFQRL---DWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC-IQAATFTVAWHPKQYL 149 (432)
Q Consensus 83 ~~---~~------~~~~~~h---~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~-~~~~V~~l~fspdg~~ 149 (432)
.. .+ +..+... .....++..|+....++..+.-|.|.++|+.+|.++..-. ...+|...+-++.+.-
T Consensus 235 ~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g 314 (1630)
T 1xi4_A 235 TPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAG 314 (1630)
T ss_pred CCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCc
Confidence 32 11 1111111 2334567788877788888999999999999999987665 4444554444433333
Q ss_pred EEEEECCCe
Q psy9319 150 LAYACDDKY 158 (432)
Q Consensus 150 l~s~s~d~~ 158 (432)
++.....|.
T Consensus 315 ~~~vnr~G~ 323 (1630)
T 1xi4_A 315 IIGVNRKGQ 323 (1630)
T ss_pred eEEEcCCce
Confidence 333445555
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=73.49 E-value=32 Score=31.36 Aligned_cols=108 Identities=18% Similarity=0.162 Sum_probs=52.8
Q ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeEEEEeeCCCCEE-EEEEeeCCCEEEEEeC------CCeEEEEeCCCCcE
Q psy9319 63 TGKYFAVGSKD-------ALVSLWDAAELTCIRTFQRLDWPVR-AISFSHDGALIASGSE------DLTIDIAHVESGKK 128 (432)
Q Consensus 63 dg~~L~sgs~d-------g~I~iwd~~~~~~~~~~~~h~~~V~-~i~~spdg~~l~sgs~------dg~V~vwd~~~~~~ 128 (432)
++.+++.|+.+ ..+.+||+.+...... .....+.. ..+...++.+++.|+. -..+.+||+.+.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56677777654 2588889887654322 11111111 1112246666666653 23589999987653
Q ss_pred EEEEe--cCCceEEEEEccCCcEEEEEECCCeEEEEeCCceEEeecCCC
Q psy9319 129 VYDIC--IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLKVFGFLPE 175 (432)
Q Consensus 129 ~~~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~vwd~~~~ 175 (432)
...-. ....-.+++. -++.+++.|+.++.-. ...+.+||+.+.
T Consensus 188 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~---~~~~~~yd~~~~ 232 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGL---SASVEAFDLKTN 232 (318)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEE---EEEEEEEETTTC
T ss_pred EECCCCCCCcccceEEE-ECCEEEEEcCcCCCCc---cceEEEEECCCC
Confidence 22211 1111112222 2567777776543210 122445555544
No 346
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.24 E-value=58 Score=29.62 Aligned_cols=113 Identities=15% Similarity=-0.005 Sum_probs=67.9
Q ss_pred CcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q psy9319 52 PVTCICIEFDP-TGKYFAVGSKDALVSLWDAAE------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVE 124 (432)
Q Consensus 52 ~~~V~~l~~sp-dg~~L~sgs~dg~I~iwd~~~------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~ 124 (432)
...|..+.... +..+++.++.+|.++...+.. |.....+.. ...+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 44565554322 467899999999999887643 222222332 2455555555556678888889988877652
Q ss_pred C-------CcEEEEE--ecCCceEEEEEccCCcEEEEEECCCeEEEEeCC
Q psy9319 125 S-------GKKVYDI--CIQAATFTVAWHPKQYLLAYACDDKYDRKQDCG 165 (432)
Q Consensus 125 ~-------~~~~~~~--~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~ 165 (432)
. ..-+..+ .....|..+...+++..++..+..|.+....+.
T Consensus 146 eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred hCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1 1222222 234556665545556678888888885555443
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=71.05 E-value=37 Score=31.48 Aligned_cols=49 Identities=6% Similarity=-0.120 Sum_probs=24.8
Q ss_pred CeEEEEeCCCCeeEEEEeeC-CCCE-EEEEEeeCCCEEEEEeC------CCeEEEEeC
Q psy9319 74 ALVSLWDAAELTCIRTFQRL-DWPV-RAISFSHDGALIASGSE------DLTIDIAHV 123 (432)
Q Consensus 74 g~I~iwd~~~~~~~~~~~~h-~~~V-~~i~~spdg~~l~sgs~------dg~V~vwd~ 123 (432)
..+.+||+.+......-... .... .+++. -++.+++.|+. ...+.++|+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 47889999876543221111 1111 22222 25556666553 235777877
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=68.97 E-value=1.1e+02 Score=31.68 Aligned_cols=100 Identities=10% Similarity=0.104 Sum_probs=60.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~ 133 (432)
.|.++...+++..|..|+. +-+..+|..++.......-....|.++...++|.+++. +.+ -+.+++..++.......
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEEECC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEEEEc
Confidence 4888888877765555554 45888998776542211112345888887778876654 444 47888887665432221
Q ss_pred --------cCCceEEEEEccCCcEEEEEECCC
Q psy9319 134 --------IQAATFTVAWHPKQYLLAYACDDK 157 (432)
Q Consensus 134 --------~~~~V~~l~fspdg~~l~s~s~d~ 157 (432)
....|.++..+.+|.+.+ |+..|
T Consensus 269 ~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 269 DSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp CTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred CCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 123488888887776544 44445
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.82 E-value=22 Score=38.81 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=33.4
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ 91 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~ 91 (432)
.+.+++..++..++++-+.|+++++|++.++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56788888888999999999999999999999987753
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.56 E-value=16 Score=40.71 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=31.2
Q ss_pred CEEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcEEEEE
Q psy9319 96 PVRAISFSHDGALIASGSEDLTIDIAHVESGKKVYDI 132 (432)
Q Consensus 96 ~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~~~~~~~ 132 (432)
.+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445566678889999999999999999999998876
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=60.71 E-value=1.6e+02 Score=30.51 Aligned_cols=106 Identities=11% Similarity=-0.031 Sum_probs=64.7
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeC------CCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRL------DWPVRAISFSHDGALIASGSEDLTIDIAHVESG 126 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h------~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~~ 126 (432)
..|.++....+|.+.+ |+.. -|..++..++... .+... ...|.++...+++..|..|+. +-|..+|..++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 4578888887777655 4444 4778888766532 22111 124888887777765555554 45888998776
Q ss_pred cEEEEEe-cCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 127 KKVYDIC-IQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 127 ~~~~~~~-~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
....... ....|.++..+++|.+.+ |+.+ -+.+++.
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~ 258 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHN 258 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECC
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEec
Confidence 5332211 234588888888887665 4444 4566654
No 352
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=58.98 E-value=15 Score=19.67 Aligned_cols=19 Identities=21% Similarity=0.178 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy9319 377 ARQAEKLGKRLERERNLGV 395 (432)
Q Consensus 377 ~~~~~~l~~~~~r~~~l~~ 395 (432)
...|+||+...+|.++..+
T Consensus 4 de~ykeled~qerlrk~rk 22 (26)
T 4g3b_A 4 DEXYKELEDXQERLRKXRK 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3579999999998876543
No 353
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.77 E-value=36 Score=34.87 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=41.4
Q ss_pred EEEEEEeeCCCEEEEEeCC------------CeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEE
Q psy9319 97 VRAISFSHDGALIASGSED------------LTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYAC 154 (432)
Q Consensus 97 V~~i~~spdg~~l~sgs~d------------g~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s 154 (432)
.-.|.|+|.|.+++.-..+ ..+.+.+..+++...-+. ....++.++|+||++.|++..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4678999999977654432 346666777777654443 567799999999998887653
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.33 E-value=54 Score=33.41 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=43.5
Q ss_pred CCEEEEEEeeCCCEEEEEeC------------CCeEEEEeCCCCcEEEEEe--cCCceEEEEEccCCcEEEEEEC
Q psy9319 95 WPVRAISFSHDGALIASGSE------------DLTIDIAHVESGKKVYDIC--IQAATFTVAWHPKQYLLAYACD 155 (432)
Q Consensus 95 ~~V~~i~~spdg~~l~sgs~------------dg~V~vwd~~~~~~~~~~~--~~~~V~~l~fspdg~~l~s~s~ 155 (432)
.....|.|.++|.++++... .+.|..++..+|+....+. ....++.++|+||++.|+++..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 34668999999987774322 2267777887887655443 3456899999999998887653
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=52.86 E-value=1.5e+02 Score=27.65 Aligned_cols=111 Identities=10% Similarity=0.076 Sum_probs=67.7
Q ss_pred cCEEEE-EEcC--CCCEEEEEeCCCeEEEEeCCC-------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy9319 53 VTCICI-EFDP--TGKYFAVGSKDALVSLWDAAE-------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAH 122 (432)
Q Consensus 53 ~~V~~l-~~sp--dg~~L~sgs~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd 122 (432)
..|.++ .+.. +..+++.++.+|.|+...+.. |.....+.. ...+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 344444 4442 578999999999999887653 222223333 34455555555556788888889888776
Q ss_pred CC--C----C---cEEEE--EecCCceEEEEEccCCcEEEEEECCCeEEEEeC
Q psy9319 123 VE--S----G---KKVYD--ICIQAATFTVAWHPKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 123 ~~--~----~---~~~~~--~~~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~ 164 (432)
.. . + .-+.. +.....|.++...+.+..++..+..|.+....+
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 65 2 1 11222 223445666655555668888889998555444
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=52.69 E-value=47 Score=33.99 Aligned_cols=58 Identities=24% Similarity=0.217 Sum_probs=39.7
Q ss_pred EEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCeeEEEEeeC-CCCEEEEEEeeCCCEEEEE
Q psy9319 55 CICIEFDPTGKYFAVGSKD------------ALVSLWDAAELTCIRTFQRL-DWPVRAISFSHDGALIASG 112 (432)
Q Consensus 55 V~~l~~spdg~~L~sgs~d------------g~I~iwd~~~~~~~~~~~~h-~~~V~~i~~spdg~~l~sg 112 (432)
.=.|+|+|.|.++++-..+ ..+.+.+..++.....+.++ ...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3568899999866654322 23555666677766555554 4579999999999877654
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=52.49 E-value=26 Score=32.55 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=28.6
Q ss_pred eEEEEeCCCCee--EEEEeeCCCCEEEEEEeeCCCEEEEEeCCC------eEEEEeCCCCcEEEEE
Q psy9319 75 LVSLWDAAELTC--IRTFQRLDWPVRAISFSHDGALIASGSEDL------TIDIAHVESGKKVYDI 132 (432)
Q Consensus 75 ~I~iwd~~~~~~--~~~~~~h~~~V~~i~~spdg~~l~sgs~dg------~V~vwd~~~~~~~~~~ 132 (432)
.+.+||+.+... +..+...... ..+...++.+++.|+.++ .|.++++.+++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 577899876443 2222211111 222334677777777542 3666688777765544
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=52.13 E-value=1.7e+02 Score=28.05 Aligned_cols=105 Identities=9% Similarity=0.039 Sum_probs=67.1
Q ss_pred cCEEEEEEcCCCCEEEE--Ee-------------CCCeEEEEeCCCC--eeEEEEee------CCCCEEEEEEe---eC-
Q psy9319 53 VTCICIEFDPTGKYFAV--GS-------------KDALVSLWDAAEL--TCIRTFQR------LDWPVRAISFS---HD- 105 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~s--gs-------------~dg~I~iwd~~~~--~~~~~~~~------h~~~V~~i~~s---pd- 105 (432)
-.|..+...+++++-+. |. .-..|.+||+.+. +.++++.- ....+..+.+. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 46778888887765432 21 1226889999998 88877752 13467888887 22
Q ss_pred ---CCEEEEEe-CCCeEEEEeCCCCcEEEEEe-------------------cCCceEEEEEccC----CcEEEEEECCC
Q psy9319 106 ---GALIASGS-EDLTIDIAHVESGKKVYDIC-------------------IQAATFTVAWHPK----QYLLAYACDDK 157 (432)
Q Consensus 106 ---g~~l~sgs-~dg~V~vwd~~~~~~~~~~~-------------------~~~~V~~l~fspd----g~~l~s~s~d~ 157 (432)
+.+++.+. ..+.|.|+|+.+++...... ....|..++++|+ ++.|+.+...+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 33444443 56789999999987766542 0135666777776 56666665544
No 359
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=51.83 E-value=1.9e+02 Score=28.60 Aligned_cols=119 Identities=11% Similarity=0.079 Sum_probs=79.0
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC-CcEEEEEe---
Q psy9319 58 IEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVES-GKKVYDIC--- 133 (432)
Q Consensus 58 l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~-~~~~~~~~--- 133 (432)
.-.+|..+.||--. ..++.|||+.+...+..+.- ...|.--.|-.+. .|+..+ +..|+-|++.. ..++..+.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecch
Confidence 34688777777665 67999999999888777763 4466677776543 454443 55799999975 34555554
Q ss_pred --cCCceEEEEEccCCcEEEEEEC---CCeEEEEeCCceEEeecCCCceeeeecCCC
Q psy9319 134 --IQAATFTVAWHPKQYLLAYACD---DKYDRKQDCGNLKVFGFLPEPIKKRKRGGT 185 (432)
Q Consensus 134 --~~~~V~~l~fspdg~~l~s~s~---d~~I~vwd~~~i~vwd~~~~~~~~~~~g~~ 185 (432)
....|.....+++.++++..|- ++.| .+.+.+|..+. ...+.+.||.
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v----~G~mQLYS~er-~~sQ~ieGha 198 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRV----VGAMQLYSVDR-KVSQPIEGHA 198 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEE----EEEEEEEESTT-CCEEEECCSE
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcc----cceEEEeeccc-cccchheeee
Confidence 2455888888999988776543 4432 24577777664 3345555664
No 360
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=50.95 E-value=1.6e+02 Score=27.39 Aligned_cols=110 Identities=7% Similarity=-0.072 Sum_probs=63.6
Q ss_pred CEEEE-EEcC--CCCEEEEEeCCCeEEEEeCCC--------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy9319 54 TCICI-EFDP--TGKYFAVGSKDALVSLWDAAE--------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAH 122 (432)
Q Consensus 54 ~V~~l-~~sp--dg~~L~sgs~dg~I~iwd~~~--------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd 122 (432)
.|.++ ...+ ++.+++.++..|.++...+.. |.....+... ..+-.+........++..+.+|.+..+.
T Consensus 93 ~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~ 171 (323)
T 1wp5_A 93 EIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFD 171 (323)
T ss_dssp CEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEE
T ss_pred EEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 35443 4433 356889999999999887641 2222223322 4555555555556788888888888776
Q ss_pred CCC-------CcEEEEEe--cCCceEEEEEccCCc-EEEEEECCCeEEEEeC
Q psy9319 123 VES-------GKKVYDIC--IQAATFTVAWHPKQY-LLAYACDDKYDRKQDC 164 (432)
Q Consensus 123 ~~~-------~~~~~~~~--~~~~V~~l~fspdg~-~l~s~s~d~~I~vwd~ 164 (432)
... +..+..+. ....|.++...+++. .+++.+..|.....++
T Consensus 172 ~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 172 ESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp GGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred HHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 532 22233332 344465554434444 6777788887544444
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=44.49 E-value=57 Score=33.25 Aligned_cols=67 Identities=16% Similarity=0.103 Sum_probs=42.5
Q ss_pred CcccccccCCCCcceeeeeeecCC------CceeEEEEeecCcceeeEEEccC-CcCEEEEEEcCCCCEEEEEe
Q psy9319 5 NFIPLLGLNPRPSLYQSSVLTDIS------PKQLDFKFKEHHKLEEQNILKAH-PVTCICIEFDPTGKYFAVGS 71 (432)
Q Consensus 5 n~I~~l~~~p~~~~l~~s~s~D~~------~~~~~i~~~d~~~~~~~~~l~~h-~~~V~~l~~spdg~~L~sgs 71 (432)
|+-..|.|++++.+++++-..... .....+...+..+++....+.+. ...++.++||||++.|+.+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 455678889999887544211000 11124455566677776666553 35689999999999887764
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=42.91 E-value=2e+02 Score=26.38 Aligned_cols=103 Identities=8% Similarity=0.066 Sum_probs=64.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeCCC-------CcE
Q psy9319 63 TGKYFAVGSKDALVSLWDAAE-------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHVES-------GKK 128 (432)
Q Consensus 63 dg~~L~sgs~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~~~-------~~~ 128 (432)
++.+|+.++..|.++...+.. |.....+.. ...+..+........++..+.+|.+..+.... +.-
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 456788889999998887642 222223333 44566665555556788888999888887642 222
Q ss_pred EEEEe--cCCceEEEEEccCCcEEEEEECCCeEEEEeCCc
Q psy9319 129 VYDIC--IQAATFTVAWHPKQYLLAYACDDKYDRKQDCGN 166 (432)
Q Consensus 129 ~~~~~--~~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~ 166 (432)
+..+. ....|.++..-+++..+++.+..|.....++..
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred eEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 33333 344566665545566777888888855555443
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.95 E-value=22 Score=39.52 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=31.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ 91 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~ 91 (432)
.+.+++..++..++++-+.|++++||++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788899999999999999999999987764
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.67 E-value=41 Score=35.25 Aligned_cols=31 Identities=10% Similarity=0.002 Sum_probs=27.3
Q ss_pred eeCCCEEEEEeCCCeEEEEeCCCCcEEEEEe
Q psy9319 103 SHDGALIASGSEDLTIDIAHVESGKKVYDIC 133 (432)
Q Consensus 103 spdg~~l~sgs~dg~V~vwd~~~~~~~~~~~ 133 (432)
..+..++++-+.|+++++|++.+++++....
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3457899999999999999999999988775
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=37.13 E-value=2.4e+02 Score=25.70 Aligned_cols=108 Identities=9% Similarity=-0.055 Sum_probs=62.4
Q ss_pred cCEEEEEE-c--CCCCEEEEEeCCCeEEEEeCCC-------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEe
Q psy9319 53 VTCICIEF-D--PTGKYFAVGSKDALVSLWDAAE-------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAH 122 (432)
Q Consensus 53 ~~V~~l~~-s--pdg~~L~sgs~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd 122 (432)
..|.++.. . .++.+++.++..|.++...+.. |.....+..+ ..+..+........++..+.+|.+..+.
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~ 173 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFK 173 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEE
Confidence 34554433 2 3466788999999999886641 2222233333 4555555555555677888888887776
Q ss_pred CCC-------CcEEEEE--ecCCceEEEEEccCCcEEEEEECCCeEEE
Q psy9319 123 VES-------GKKVYDI--CIQAATFTVAWHPKQYLLAYACDDKYDRK 161 (432)
Q Consensus 123 ~~~-------~~~~~~~--~~~~~V~~l~fspdg~~l~s~s~d~~I~v 161 (432)
... ..-+..+ .....|.++...+++..+++.+..|.+.-
T Consensus 174 ~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr 221 (307)
T 1zi0_A 174 ESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKR 221 (307)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEE
T ss_pred HHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEE
Confidence 532 1222222 23445666654445566777788887433
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=35.68 E-value=2.7e+02 Score=25.77 Aligned_cols=115 Identities=10% Similarity=0.036 Sum_probs=63.6
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCC--C---------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEE
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAA--E---------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIA 121 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~--~---------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vw 121 (432)
..+..+........|+..+..|.+..+... . |.....+. ....|.++...+++.+++..+..|.++.-
T Consensus 146 D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 146 DELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp CCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred CEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 344444444445678888889988877765 2 11111222 23456666666666789999999999887
Q ss_pred eCCC-------CcEEEEEe--c-CCceEEEEEccCCcEEEEEECCCeEEEEeCCceE
Q psy9319 122 HVES-------GKKVYDIC--I-QAATFTVAWHPKQYLLAYACDDKYDRKQDCGNLK 168 (432)
Q Consensus 122 d~~~-------~~~~~~~~--~-~~~V~~l~fspdg~~l~s~s~d~~I~vwd~~~i~ 168 (432)
.+.. +.-+..+. . .+.+..+....+...++..+.+|.+.-++...+.
T Consensus 225 ~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~ 281 (327)
T 3uc1_A 225 AIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVR 281 (327)
T ss_dssp EGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSC
T ss_pred EHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhcc
Confidence 7532 22333332 1 3344444333334455556666664444443333
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=35.49 E-value=62 Score=33.92 Aligned_cols=36 Identities=22% Similarity=0.573 Sum_probs=29.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeEEEEe
Q psy9319 54 TCICIEFDPTGKYFAVGSKDALVSLWDAAELTCIRTFQ 91 (432)
Q Consensus 54 ~V~~l~~spdg~~L~sgs~dg~I~iwd~~~~~~~~~~~ 91 (432)
.|.|+.+ +..++++-+.|.++++|++.++.++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3555544 46799999999999999999999887765
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=29.72 E-value=3.4e+02 Score=25.16 Aligned_cols=105 Identities=11% Similarity=-0.008 Sum_probs=51.3
Q ss_pred CcCEEEEEEcC-CCCEEEEEeCCC----eEEEEeCCCCeeEEEEe------e--------CCCCEEEEEEee-C-CCEEE
Q psy9319 52 PVTCICIEFDP-TGKYFAVGSKDA----LVSLWDAAELTCIRTFQ------R--------LDWPVRAISFSH-D-GALIA 110 (432)
Q Consensus 52 ~~~V~~l~~sp-dg~~L~sgs~dg----~I~iwd~~~~~~~~~~~------~--------h~~~V~~i~~sp-d-g~~l~ 110 (432)
...|.+++++| +...|.+++..+ .|...+ +.+..-..+. . ....|.++++.| + ...|+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35689999998 333444444444 344332 2222111111 0 112477888887 2 45566
Q ss_pred EEeCCCeEEEEeCCCCcEEEEEe--------------------cCCceEEEEEccC-CcEEEEEECCCe
Q psy9319 111 SGSEDLTIDIAHVESGKKVYDIC--------------------IQAATFTVAWHPK-QYLLAYACDDKY 158 (432)
Q Consensus 111 sgs~dg~V~vwd~~~~~~~~~~~--------------------~~~~V~~l~fspd-g~~l~s~s~d~~ 158 (432)
.++..+.|...+ ..|.....+. ....+.+|.++|. ...|+.+..++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~gg 200 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGG 200 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBE
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCC
Confidence 555555555442 2333333321 1134778999883 334444443433
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=25.83 E-value=4.2e+02 Score=24.94 Aligned_cols=60 Identities=5% Similarity=-0.032 Sum_probs=38.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeC
Q psy9319 63 TGKYFAVGSKDALVSLWDAAE-------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHV 123 (432)
Q Consensus 63 dg~~L~sgs~dg~I~iwd~~~-------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~ 123 (432)
++.+|+.++..|.++...+.. |.....+.. ...+-.+........++..+.+|.+..+..
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEG
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEc
Confidence 456899999999999887542 222223332 344555555555557777888888777765
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=25.52 E-value=3.6e+02 Score=24.08 Aligned_cols=116 Identities=6% Similarity=-0.086 Sum_probs=65.1
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CeeEEEEeeCCCCEEEEEEeeCCCEEEEEeCCCeEEEEeC
Q psy9319 53 VTCICIEFDPTGKYFAVGSKDALVSLWDAAE---------LTCIRTFQRLDWPVRAISFSHDGALIASGSEDLTIDIAHV 123 (432)
Q Consensus 53 ~~V~~l~~spdg~~L~sgs~dg~I~iwd~~~---------~~~~~~~~~h~~~V~~i~~spdg~~l~sgs~dg~V~vwd~ 123 (432)
..+..+........++..+..|.+..+.... |.....+. ....|.++...+++..++..+..|.++...+
T Consensus 116 D~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 116 DEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp CCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred CEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 3455554555556788888899888876531 22222232 2345666655556678889999999888876
Q ss_pred CC-------CcEEEEEecCCceEEEEEccCCcEEEEEECCCeEEE--EeCCceEE
Q psy9319 124 ES-------GKKVYDICIQAATFTVAWHPKQYLLAYACDDKYDRK--QDCGNLKV 169 (432)
Q Consensus 124 ~~-------~~~~~~~~~~~~V~~l~fspdg~~l~s~s~d~~I~v--wd~~~i~v 169 (432)
.. +..+..+...+.+..+....+...++..+.+|.+.. ++...+..
T Consensus 195 ~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~i~~ 249 (276)
T 3no0_A 195 EEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKDIPL 249 (276)
T ss_dssp GGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGGSCB
T ss_pred HHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHHCCC
Confidence 32 233333333344444433333345666677776444 44444433
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.23 E-value=4.6e+02 Score=24.85 Aligned_cols=133 Identities=6% Similarity=-0.024 Sum_probs=77.4
Q ss_pred eEEEEeecCcc--eeeEEEccC------CcCEEEEEEc---CC----CCEEEEE-eCCCeEEEEeCCCCeeEEEEee---
Q psy9319 32 LDFKFKEHHKL--EEQNILKAH------PVTCICIEFD---PT----GKYFAVG-SKDALVSLWDAAELTCIRTFQR--- 92 (432)
Q Consensus 32 ~~i~~~d~~~~--~~~~~l~~h------~~~V~~l~~s---pd----g~~L~sg-s~dg~I~iwd~~~~~~~~~~~~--- 92 (432)
-.+-.+|+.+. +.++++.-. ...+..+++. |. +.+.+.+ +..+-|.|+|+.+++.-..+..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 35667788888 888776532 3467888887 22 2333333 3467899999998765443310
Q ss_pred -----------C----CCCEEEEEEeeC----CCEEEEEeCCC-eEEEEe---CCC---CcEEEEEecC---CceEEEEE
Q psy9319 93 -----------L----DWPVRAISFSHD----GALIASGSEDL-TIDIAH---VES---GKKVYDICIQ---AATFTVAW 143 (432)
Q Consensus 93 -----------h----~~~V~~i~~spd----g~~l~sgs~dg-~V~vwd---~~~---~~~~~~~~~~---~~V~~l~f 143 (432)
. ...|..|++||+ ++.|+.+...+ .+.--. ++. ...+..+... +.-..+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 136888999997 77777766544 233222 112 2233334322 23344666
Q ss_pred c-cCCcEEEEEECCCeEEEEeC
Q psy9319 144 H-PKQYLLAYACDDKYDRKQDC 164 (432)
Q Consensus 144 s-pdg~~l~s~s~d~~I~vwd~ 164 (432)
+ .+|.++++--....|..|+.
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEET
T ss_pred eCCCCeEEEEeccCCeEEEEeC
Confidence 5 56776666666777555544
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.35 E-value=6.7e+02 Score=26.13 Aligned_cols=102 Identities=9% Similarity=-0.032 Sum_probs=55.6
Q ss_pred CcCEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeEEEEeeC-------CCCEEEEEEeeC-CCEEEEEeCCC-----e
Q psy9319 52 PVTCICIEFDPT-GKYFAVGSKDALVSLWDAAELTCIRTFQRL-------DWPVRAISFSHD-GALIASGSEDL-----T 117 (432)
Q Consensus 52 ~~~V~~l~~spd-g~~L~sgs~dg~I~iwd~~~~~~~~~~~~h-------~~~V~~i~~spd-g~~l~sgs~dg-----~ 117 (432)
.+.|.+++++|. ...+++++..+.|...+= .|..-..+..+ ...|.+++++|. ...++.+.... .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999994 466777777776665542 23222222221 236999999983 34454444321 2
Q ss_pred EEEEeCCCCcEEEEEecC----------CceEEEEEccC-CcEEEEEE
Q psy9319 118 IDIAHVESGKKVYDICIQ----------AATFTVAWHPK-QYLLAYAC 154 (432)
Q Consensus 118 V~vwd~~~~~~~~~~~~~----------~~V~~l~fspd-g~~l~s~s 154 (432)
..+.....|+....+... ..+..++++|. ...++.+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 223344556555444311 12456788774 33444444
No 373
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=20.69 E-value=1.7e+02 Score=24.16 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q psy9319 383 LGKRLERERNLGVVERKLFVQRFLS 407 (432)
Q Consensus 383 l~~~~~r~~~l~~~~~~~~~~~~~~ 407 (432)
.++.-+|..+|..|...+++=.+..
T Consensus 52 ~e~~~k~~seLe~V~~nv~LL~EML 76 (158)
T 1naf_A 52 MEKISKRVNAIEEVNNNVKLLTEMV 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555567777777776655544
No 374
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=20.26 E-value=6e+02 Score=24.64 Aligned_cols=102 Identities=14% Similarity=0.047 Sum_probs=52.8
Q ss_pred cccccccCCCCc--ceeeeeeecCCCceeEEEEeecCcc---eeeEEEc---------cCCcCEEEEEEcCC----CCEE
Q psy9319 6 FIPLLGLNPRPS--LYQSSVLTDISPKQLDFKFKEHHKL---EEQNILK---------AHPVTCICIEFDPT----GKYF 67 (432)
Q Consensus 6 ~I~~l~~~p~~~--~l~~s~s~D~~~~~~~i~~~d~~~~---~~~~~l~---------~h~~~V~~l~~spd----g~~L 67 (432)
.-..++|.|++. +| ++- +...|.+++.... ..+..+. +..+....++|+|+ +.+.
T Consensus 15 ~P~~~a~~pdG~~rl~-V~e------r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLF-ILE------KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SEEEEECCSSSSCCEE-EEE------TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CceEEEECCCCCeEEE-EEe------CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 346788999986 44 442 2234555543211 1222221 11456789999996 4444
Q ss_pred EEEeCC------------CeEEEEeCCC----------CeeEEEEee--CCCCEEEEEEeeCCCEEEEEeC
Q psy9319 68 AVGSKD------------ALVSLWDAAE----------LTCIRTFQR--LDWPVRAISFSHDGALIASGSE 114 (432)
Q Consensus 68 ~sgs~d------------g~I~iwd~~~----------~~~~~~~~~--h~~~V~~i~~spdg~~l~sgs~ 114 (432)
++-+.+ ..|.-|.+.. .+.+..+.. ..-....|.|.|||.+.++.+.
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 443321 1344455432 122333321 1123578999999986666544
Done!