RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9320
         (183 letters)



>d1t0ba_ c.23.16.6 (A:) GK2113 homologue {Bacillus
           stearothermophilus [TaxId: 1422]}
          Length = 240

 Score = 25.8 bits (56), Expect = 3.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 85  EVLAEKDVEQSSEVLTEKDEVQSSEVLAEKDV 116
             LAE   + ++ VL E +   + EVL   DV
Sbjct: 34  SYLAEAGFDAATAVLDEPEHGLTDEVLDRCDV 65


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.292    0.113    0.259 

Gapped
Lambda     K      H
   0.267   0.0650    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 472,001
Number of extensions: 17119
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 4
Length of query: 183
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 103
Effective length of database: 1,309,196
Effective search space: 134847188
Effective search space used: 134847188
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.7 bits)
S2: 50 (23.2 bits)