Query psy9323
Match_columns 289
No_of_seqs 232 out of 1867
Neff 9.6
Searched_HMMs 29240
Date Sat Aug 17 00:26:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9323hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rh1_A Beta-2-adrenergic recep 100.0 1E-33 3.5E-38 261.7 19.3 200 87-286 39-239 (500)
2 4grv_A Neurotensin receptor ty 100.0 5E-34 1.7E-38 264.4 17.0 199 87-286 31-238 (510)
3 1u19_A Rhodopsin; G protein-co 100.0 5.6E-32 1.9E-36 237.8 16.8 194 86-286 36-237 (349)
4 4amj_A Beta-1 adrenergic recep 100.0 4.1E-32 1.4E-36 235.0 15.1 202 86-287 9-211 (315)
5 3uon_A Human M2 muscarinic ace 100.0 9.9E-32 3.4E-36 245.3 18.3 195 89-287 24-220 (467)
6 4dkl_A MU-type opioid receptor 100.0 5.9E-32 2E-36 246.4 15.6 200 87-287 16-215 (464)
7 3vw7_A Proteinase-activated re 100.0 2.3E-31 7.7E-36 244.1 16.6 196 85-286 17-221 (484)
8 2ks9_A Substance-P receptor; w 100.0 1E-30 3.5E-35 231.4 20.2 194 89-284 33-227 (364)
9 3odu_A C-X-C chemokine recepto 100.0 1.4E-31 4.6E-36 246.7 14.8 192 87-287 47-243 (502)
10 4ea3_A Fusion protein of nocic 100.0 1E-30 3.5E-35 237.3 19.3 198 87-285 124-321 (434)
11 3rze_A Histamine H1 receptor, 100.0 2.7E-31 9.3E-36 241.4 14.7 193 91-287 11-205 (452)
12 3sn6_R Lysozyme, beta-2 adrene 100.0 3.8E-31 1.3E-35 245.2 14.8 201 87-287 181-382 (514)
13 2z73_A Rhodopsin; visual pigme 100.0 4.9E-31 1.7E-35 240.2 15.2 195 87-287 33-234 (448)
14 3pbl_A D(3) dopamine receptor, 100.0 5.6E-31 1.9E-35 241.3 15.2 189 89-287 39-231 (481)
15 3v2y_A Sphingosine 1-phosphate 100.0 3.2E-30 1.1E-34 239.4 19.6 185 89-284 64-250 (520)
16 2lnl_A C-X-C chemokine recepto 100.0 3.5E-30 1.2E-34 222.0 17.9 195 89-287 12-208 (296)
17 3eml_A Human adenosine A2A rec 100.0 1.1E-30 3.7E-35 239.5 15.0 196 89-287 22-226 (488)
18 4eiy_A Adenosine receptor A2A/ 100.0 1.1E-30 3.8E-35 237.1 14.6 198 87-287 30-236 (447)
19 1hll_A Alpha-2A adrenergic rec 98.7 3.5E-09 1.2E-13 58.8 1.5 31 174-204 2-32 (32)
20 2lot_A Apelin receptor; membra 96.5 0.00013 4.4E-09 46.5 -2.3 30 90-119 30-59 (64)
21 2rdd_B UPF0092 membrane protei 82.4 1.6 5.4E-05 24.1 3.3 26 263-288 6-32 (37)
22 2ks1_B Epidermal growth factor 49.5 28 0.00096 19.9 3.8 16 274-289 29-44 (44)
23 1pi7_A VPU protein, U ORF prot 43.2 40 0.0014 18.3 4.0 28 259-286 8-35 (36)
24 2l2t_A Receptor tyrosine-prote 33.3 66 0.0023 18.3 3.7 16 274-289 28-43 (44)
25 2jwa_A Receptor tyrosine-prote 23.9 1.1E+02 0.0037 17.4 3.8 11 277-287 32-42 (44)
No 1
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1e-33 Score=261.65 Aligned_cols=200 Identities=36% Similarity=0.773 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.+++.+|+.+.....+.|.+|...|++..+
T Consensus 39 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~ 118 (500)
T 2rh1_A 39 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTS 118 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHH
Confidence 44556688999999999999999999999999999999999999999999999899999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-ccccCCCCcc
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQ-LFRSHNPNSC 245 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~c 245 (289)
+..++..+|++++++||+|||+||++|++|++.++++++..+++++|+++++++++|.+.+|....... ..|......|
T Consensus 119 ~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 198 (500)
T 2rh1_A 119 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCC 198 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceeccccccc
Confidence 999999999999999999999999999999999999999999999999999999878766654432211 1122122112
Q ss_pred cccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy9323 246 IFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 286 (289)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~ 286 (289)
.......|.+...++.|++|+++|++||.+|++++||+.++
T Consensus 199 ~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 199 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344567777778889999999999999999999998776
No 2
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=5e-34 Score=264.44 Aligned_cols=199 Identities=23% Similarity=0.348 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcc---cchhHHHHHHHHHHhHHHHHhhhhHHHHHHHh--cccccchhhh
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKL---RVITNYFVVSLAFADMLVAFGAMGFNLSVEIF--NRWLFGYFMC 161 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~---~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~--~~~~~~~~~C 161 (289)
..++..+++.+++++|++||+++++++.++|++ ++++|+|++|||++|++.+++.+|+.+..... +.|.+|+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 345556788899999999999999999887654 47899999999999999999999998876654 5799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCC
Q psy9323 162 DVWNSLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHN 241 (289)
Q Consensus 162 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (289)
++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++ ++.............
T Consensus 111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~-~~~~~~~~~~~~~~~ 189 (510)
T 4grv_A 111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLF-TMGLQNRSADGTHPG 189 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHH-HEEEEECSSSSCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHH-hhcccccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988886 342221111111111
Q ss_pred CCcccc----cccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy9323 242 PNSCIF----VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 286 (289)
Q Consensus 242 ~~~c~~----~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~ 286 (289)
...|.. .....|..+..++.|++|+++|++||.+|+++++++.++
T Consensus 190 ~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~ 238 (510)
T 4grv_A 190 GLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNI 238 (510)
T ss_dssp GEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTH
T ss_pred ccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhh
Confidence 122332 223456667778889999999999999999999986553
No 3
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.98 E-value=5.6e-32 Score=237.75 Aligned_cols=194 Identities=19% Similarity=0.404 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHH
Q psy9323 86 LLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWN 165 (289)
Q Consensus 86 ~~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 165 (289)
....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|..+.....+.|.+|+..|++..
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 115 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG 115 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHH
Confidence 34556668889999999999999999999999999999999999999999999988999888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCcc
Q psy9323 166 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC 245 (289)
Q Consensus 166 ~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 245 (289)
++..++..+|++++++|++|||++|++|+++++ .+++++...++++|+++++.++|+.+ ++.....+.. ...|
T Consensus 116 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~~~~~-----~~~C 188 (349)
T 1u19_A 116 FFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLV-GWSRYIPEGM-----QCSC 188 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGT-TSSCCEEETT-----TTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHH-heeeeeccCC-----ceee
Confidence 999999999999999999999999999999876 68999999999999999999988775 4433322211 1123
Q ss_pred cc--------cccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy9323 246 IF--------VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 286 (289)
Q Consensus 246 ~~--------~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~ 286 (289)
.. .....|.....++.+++|++++++||.+|++++||++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 237 (349)
T 1u19_A 189 GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ 237 (349)
T ss_dssp ECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCS
T ss_pred cccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 21 123455666677888999999999999999999887653
No 4
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.98 E-value=4.1e-32 Score=235.00 Aligned_cols=202 Identities=39% Similarity=0.754 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHH
Q psy9323 86 LLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWN 165 (289)
Q Consensus 86 ~~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 165 (289)
.......+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|+.+.....+.|.+|+..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 35566678899999999999999999999999999999999999999999999889999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-cccccCCCCc
Q psy9323 166 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAH-QLFRSHNPNS 244 (289)
Q Consensus 166 ~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (289)
++..++..+|++++++|++|||++|++|++|++.++++++...++++|+++++.+.+|.+..+...... ...|......
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 168 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC 168 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccccccc
Confidence 999999999999999999999999999999999899999999999999999999988887544332221 1222223333
Q ss_pred ccccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 245 CIFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 245 c~~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
|.......|.....++.+++|+++++++|.+|++++||+.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~ 211 (315)
T 4amj_A 169 CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKI 211 (315)
T ss_dssp CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3334456677777788899999999999999999999876553
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.98 E-value=9.9e-32 Score=245.30 Aligned_cols=195 Identities=26% Similarity=0.535 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 168 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (289)
.+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++.+|+.+.....+.|.+|+..|++..++.
T Consensus 24 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 103 (467)
T 3uon_A 24 VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALD 103 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHH
Confidence 45567889999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCccccc
Q psy9323 169 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCIFV 248 (289)
Q Consensus 169 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 248 (289)
.++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+++. +....... ......|...
T Consensus 104 ~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~---~~~~~~C~~~ 179 (467)
T 3uon_A 104 YVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILF-WQFIVGVR---TVEDGECYIQ 179 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHSCC---CCCSSCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhccccc---CCCCCcceee
Confidence 9999999999999999999999999999999999999999999999999999888763 32211111 0122335432
Q ss_pred --ccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 249 --VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 249 --~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
....|.+...++.|++|++++++||.+|++++||+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 220 (467)
T 3uon_A 180 FFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIF 220 (467)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 344567777888999999999999999999999987643
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.98 E-value=5.9e-32 Score=246.44 Aligned_cols=200 Identities=22% Similarity=0.367 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++. +|+.+.....+.|.+|...|++..+
T Consensus 16 ~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~ 94 (464)
T 4dkl_A 16 TAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVIS 94 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHH
Confidence 455666889999999999999999999999999999999999999999998886 8998888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCccc
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI 246 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 246 (289)
+..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+.+............|........
T Consensus 95 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 174 (464)
T 4dkl_A 95 IDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPT 174 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcc
Confidence 99999999999999999999999999999999999999999999999999999988876433322222211211111111
Q ss_pred ccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 247 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
......|.+...++.+++|++++++||.+|++++||++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~ 215 (464)
T 4dkl_A 175 WYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIF 215 (464)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 12244566777788899999999999999999999877643
No 7
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=244.11 Aligned_cols=196 Identities=22% Similarity=0.260 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHh-cccccchhhhHH
Q psy9323 85 SLLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIF-NRWLFGYFMCDV 163 (289)
Q Consensus 85 ~~~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~-~~~~~~~~~C~~ 163 (289)
.....+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.++. +|+....... +.|.+|...|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 34556677899999999999999999999999999999999999999999999775 5655555554 489999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCC
Q psy9323 164 WNSLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPN 243 (289)
Q Consensus 164 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++ ++....... ....
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~-~~~~~~~~~----~~~~ 170 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLL-KEQTIQVPG----LGIT 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHT-SCCEEEETT----TTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHH-hhhccccCC----CCCc
Confidence 99999999999999999999999999999999999999999999999999999999988776 332221110 0112
Q ss_pred cccccc--------cceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy9323 244 SCIFVV--------NRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 286 (289)
Q Consensus 244 ~c~~~~--------~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~ 286 (289)
.|...+ ...|.+...++.|++|+++|++||.+|++++||++|+
T Consensus 171 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~ 221 (484)
T 3vw7_A 171 TCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANI 221 (484)
T ss_dssp EESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCH
T ss_pred eeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHH
Confidence 233211 1225566678889999999999999999999998864
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=1e-30 Score=231.43 Aligned_cols=194 Identities=23% Similarity=0.470 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 168 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (289)
.+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|..+.....+.|.+|+..|++..++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 44467888999999999999999999999999999999999999999999888999888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCcc-cc
Q psy9323 169 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC-IF 247 (289)
Q Consensus 169 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c-~~ 247 (289)
.++..+|++++++|++|||++|++|++++ .+++++...++++|+++++.++|+.+.+......+...|....... ..
T Consensus 113 ~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~ 190 (364)
T 2ks9_A 113 IAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNK 190 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchh
Confidence 99999999999999999999999999976 5888889999999999999998765432222211111111110000 01
Q ss_pred cccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9323 248 VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQE 284 (289)
Q Consensus 248 ~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~ 284 (289)
.....|.....++.+++|+++++++|.+|++++||++
T Consensus 191 ~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~ 227 (364)
T 2ks9_A 191 IYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASE 227 (364)
T ss_dssp TTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1223466667778899999999999999999998754
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.97 E-value=1.4e-31 Score=246.68 Aligned_cols=192 Identities=21% Similarity=0.333 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.+ +.+|+.+.... ..|.+|...|++..+
T Consensus 47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~~~~~~~~~C~~~~~ 124 (502)
T 3odu_A 47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKAVHV 124 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-TCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCcCCchhhhhHHH
Confidence 3455668899999999999999999999999999999999999999999996 47888776554 479999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCccc
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI 246 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 246 (289)
+..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+++........ ....|.
T Consensus 125 ~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~-------~~~~C~ 197 (502)
T 3odu_A 125 IYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD-------DRYICD 197 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS-------SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC-------CceEEe
Confidence 9999999999999999999999999999999999999999999999999999998887643222211 122243
Q ss_pred c-----cccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 247 F-----VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 247 ~-----~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
. .....|.+...++.+++|+++|++||.+|++++||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 198 RFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred ecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 2 2234456667788899999999999999999999987664
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=237.31 Aligned_cols=198 Identities=23% Similarity=0.347 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++. ++.+|+.+.....+.|.++...|++..+
T Consensus 124 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 202 (434)
T 4ea3_A 124 LKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIA 202 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHH
Confidence 455666888999999999999999999999999999999999999999998 5578988888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCccc
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI 246 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 246 (289)
+..++..+|++++++|++|||++|++|++|++.++++++..+++++|++++++++|+.+.+..........|........
T Consensus 203 ~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 282 (434)
T 4ea3_A 203 IDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQ 282 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCChH
Confidence 99999999999999999999999999999999999999999999999999999988777544333322211111111011
Q ss_pred ccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy9323 247 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEH 285 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~ 285 (289)
......|.+...++.+++|+++++++|.+|++++||+++
T Consensus 283 ~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 321 (434)
T 4ea3_A 283 DYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRL 321 (434)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 122344667777888999999999999999999987653
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=241.40 Aligned_cols=193 Identities=26% Similarity=0.494 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHHHH
Q psy9323 91 KILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLDVY 170 (289)
Q Consensus 91 ~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 170 (289)
..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|+.+.....+.|.+|...|++..++..+
T Consensus 11 ~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 90 (452)
T 3rze_A 11 LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYV 90 (452)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHH
Confidence 34788899999999999999999999999999999999999999999998999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCcccc--c
Q psy9323 171 FSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCIF--V 248 (289)
Q Consensus 171 ~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~--~ 248 (289)
+..+|++++++|++|||++|++|++|++.++++++..+++++|++++++++|.. ++.....+.. ......|.. .
T Consensus 91 ~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~--~~~~~~~~~~--~~~~~~C~~~~~ 166 (452)
T 3rze_A 91 ASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPIL--GWNHFMQQTS--VRREDKCETDFY 166 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHH--CCCC---------CCSSSSCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHH--HHHhcccccc--cCCCCeecCCCc
Confidence 999999999999999999999999999999999999999999999999986533 3433222111 112233432 2
Q ss_pred ccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 249 VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 249 ~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
....|.+...++.+++|++++++||.+|++++||+++++
T Consensus 167 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 205 (452)
T 3rze_A 167 DVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIF 205 (452)
T ss_dssp TCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 345567777889999999999999999999999886653
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=3.8e-31 Score=245.20 Aligned_cols=201 Identities=36% Similarity=0.757 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++.+|+.+.....+.|.+|+..|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 34455688899999999999999999999999999999999999999999999899999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc-cccCCCCcc
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQL-FRSHNPNSC 245 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~c 245 (289)
+..++..+|++++++|++|||++|++|++|+++++++++..+++++|+++++++++|.+.++........ .|......+
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 340 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCC 340 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeeccccc
Confidence 9999999999999999999999999999999989999999999999999999998888766644433221 122222222
Q ss_pred cccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 246 IFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
.......|.+...++.+++|++++++||.+|++++||+.+++
T Consensus 341 ~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 382 (514)
T 3sn6_R 341 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKI 382 (514)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 233455677778889999999999999999999999876543
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=4.9e-31 Score=240.16 Aligned_cols=195 Identities=25% Similarity=0.448 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhh-hhHHHHHHHhcccccchhhhHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGA-MGFNLSVEIFNRWLFGYFMCDVWN 165 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 165 (289)
...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++. +|+.+.....+.|.+++..|++..
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 112 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYG 112 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHH
Confidence 3445567888999999999999999999999999999999999999999998864 888888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCcc
Q psy9323 166 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC 245 (289)
Q Consensus 166 ~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 245 (289)
++..++..+|++++++|++|||++|++|++++++++++++..+++++|++++++++++.+ ++.....+. ....|
T Consensus 113 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~-----~~~~c 186 (448)
T 2z73_A 113 FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF-GWGAYTLEG-----VLCNC 186 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG-TSSCEEECT-----TSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHh-ceeeeeecC-----CceeE
Confidence 999999999999999999999999999999999999999999999999999999987776 443322211 11223
Q ss_pred ccc------ccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 246 IFV------VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 246 ~~~------~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
... ....+.....++.+++|++++++||.+|++++||++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 234 (448)
T 2z73_A 187 SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEM 234 (448)
T ss_dssp EECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred ecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 123455566677789999999999999999998876543
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=5.6e-31 Score=241.33 Aligned_cols=189 Identities=36% Similarity=0.593 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHh-cccccchhhhHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIF-NRWLFGYFMCDVWNSL 167 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~ 167 (289)
.+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.+++.+|+.+..... +.|.+|...|++..++
T Consensus 39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~ 118 (481)
T 3pbl_A 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTL 118 (481)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHH
Confidence 344578889999999999999999999999999999999999999999998899988876666 6899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCc
Q psy9323 168 DVYFSSASILHLCCISVDRYYAIVQPLDY---HLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNS 244 (289)
Q Consensus 168 ~~~~~~~S~~~l~~is~dRy~aI~~P~~~---~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
..++..+|++++++|++|||++|++|++| .+..+++++..+++++|++++++++|+.+ ++.... ....
T Consensus 119 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~--------~~~~ 189 (481)
T 3pbl_A 119 DVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLF-GFNTTG--------DPTV 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCS--------STTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHh-eecccC--------CCCc
Confidence 99999999999999999999999999998 56778899999999999999999988775 443321 2233
Q ss_pred ccccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 245 CIFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 245 c~~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
|.... ..|..+..++.+++|++++++||.+|++++||++++.
T Consensus 190 C~~~~-~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~ 231 (481)
T 3pbl_A 190 CSISN-PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKN 231 (481)
T ss_dssp CSCCC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred ccccC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 54332 3366677788999999999999999999999987653
No 15
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.97 E-value=3.2e-30 Score=239.37 Aligned_cols=185 Identities=20% Similarity=0.349 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 168 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (289)
.+..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.++..+|..+.. ....|.++...|++..++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 555688999999999999999999999999999999999999999999999888877655 5678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCccccc
Q psy9323 169 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCIFV 248 (289)
Q Consensus 169 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 248 (289)
.++.++|++++++||+|||+||+ |++|+..++++++..+++++|++++++++||++ +|..... ...|...
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~--------~~~C~~~ 212 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIM-GWNCISA--------LSSCSTV 212 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTT-TCBCTTC--------GGGBCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHH-eeccccC--------CCccccc
Confidence 99999999999999999999999 999999999999999999999999999988876 5544321 1234432
Q ss_pred c--cceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy9323 249 V--NRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQE 284 (289)
Q Consensus 249 ~--~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~ 284 (289)
+ ...+.....++.|++|+++|++||.+|++++||++
T Consensus 213 ~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 213 LPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp STTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 22223334456799999999999999999999886
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=221.98 Aligned_cols=195 Identities=22% Similarity=0.330 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 168 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (289)
.+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++ .+|...... ..+|..|+..|+...++.
T Consensus 12 ~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~~~~~~~~~c~~~~~~~ 89 (296)
T 2lnl_A 12 YVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLK 89 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSSCCSSHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cCCCccchhHHHHHhhhh
Confidence 344578889999999999999999999999999999999999999999887 466666544 357999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccC--CCCccc
Q psy9323 169 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSH--NPNSCI 246 (289)
Q Consensus 169 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~c~ 246 (289)
.++..+|++++++||+|||++|++|++|+.. .+++...+++++|+.+++.++|+... +.....+.....+ ......
T Consensus 90 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~-~~~~~~~~~~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 167 (296)
T 2lnl_A 90 EVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLF-RQAYHPNNSSPVCYEVLGNDT 167 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCSSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHT-SSCCCCCTTSCCCCSCCSCCT
T ss_pred hhhHHHHHHHHHHHHhhhhhhhhhccccchh-hhhhhHheehHHHHHHHHHhcchhhc-ceeecCCCCCceeeeeccccc
Confidence 9999999999999999999999999998765 45677778889999999999887763 3332222111111 111111
Q ss_pred ccccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 247 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
......+......+.+++|+.++..+|.++.++++|++++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~~~ 208 (296)
T 2lnl_A 168 AKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQ 208 (296)
T ss_dssp TTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCCHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22334566677788999999999999999999987765544
No 17
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=1.1e-30 Score=239.50 Aligned_cols=196 Identities=29% Similarity=0.465 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHHHH
Q psy9323 89 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 168 (289)
Q Consensus 89 ~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 168 (289)
.+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|+.+... ..|.++...|++..++.
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~ 99 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFV 99 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHH
Confidence 3445788899999999999999999999999999999999999999999998899877543 37888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc------cccccCCC
Q psy9323 169 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAH------QLFRSHNP 242 (289)
Q Consensus 169 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~------~~~~~~~~ 242 (289)
.++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+.+ ++...... ...|....
T Consensus 100 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 178 (488)
T 3eml_A 100 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGEGQ 178 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG-TCCSSCC-------CCSSCTTC
T ss_pred HHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999988876 45432221 11222222
Q ss_pred Ccccc---cccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 243 NSCIF---VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 243 ~~c~~---~~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
..|.. .....+.+...++.+++|+++|++||.+|++++||+.++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~ 226 (488)
T 3eml_A 179 VACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIF 226 (488)
T ss_dssp EECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred ceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 22321 1223355566788899999999999999999999987764
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=1.1e-30 Score=237.06 Aligned_cols=198 Identities=28% Similarity=0.426 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhheeeecCcccchhHHHHHHHHHHhHHHHHhhhhHHHHHHHhcccccchhhhHHHHH
Q psy9323 87 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 166 (289)
Q Consensus 87 ~~~~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~~~~~~~ll~nLaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 166 (289)
...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|+.+.. ...|..+...|++..+
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~~~~~~~~~C~~~~~ 107 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI--STGFCAACHGCLFIAC 107 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HTTCEEEHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCccHHHHHHH
Confidence 44566688999999999999999999999999999999999999999999998889987753 3477789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc------cccccC
Q psy9323 167 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAH------QLFRSH 240 (289)
Q Consensus 167 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~iW~~s~~~~~~~~~~~~~~~~~~------~~~~~~ 240 (289)
+..++..+|++++++||+|||++|++|++|+++++++++..+++++|++++++++||.+ ++...... ...|..
T Consensus 108 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 186 (447)
T 4eiy_A 108 FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGE 186 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG-TCSSTTSCCHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh-eeccccccCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999988876 45332211 111222
Q ss_pred CCCccccc---ccceehhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy9323 241 NPNSCIFV---VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 287 (289)
Q Consensus 241 ~~~~c~~~---~~~~~~~~~~~~~~~iPl~ii~~~y~~I~~~l~~~~~~~ 287 (289)
....|... ....+.+...++.+++|++++++||.+|++++||+.++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 236 (447)
T 4eiy_A 187 GQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADL 236 (447)
T ss_dssp TEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22223221 123334445567789999999999999999999987764
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.71 E-value=3.5e-09 Score=58.80 Aligned_cols=31 Identities=52% Similarity=0.963 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccchhhH
Q psy9323 174 ASILHLCCISVDRYYAIVQPLDYHLIMTKSR 204 (289)
Q Consensus 174 ~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~ 204 (289)
+|++++++|++|||++|++|++|+..+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988776653
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.52 E-value=0.00013 Score=46.47 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHhHhhhheeeecCcc
Q psy9323 90 LKILLMLFIIVSAIFGNLLVIVSVMRHRKL 119 (289)
Q Consensus 90 ~~~~~~~~i~~~gl~gN~lvl~~~~~~~~~ 119 (289)
+..+++.+++++|++||+++++++.++|..
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 445789999999999999999999887753
No 21
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=82.41 E-value=1.6 Score=24.12 Aligned_cols=26 Identities=12% Similarity=0.287 Sum_probs=18.5
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhhhhhc
Q psy9323 263 WIPGVIM-IYMYYQIYKEADRQEHMLF 288 (289)
Q Consensus 263 ~iPl~ii-~~~y~~I~~~l~~~~~~~~ 288 (289)
++|++++ ++.|..+.|--+|++|+.+
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~ 32 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHK 32 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3455544 6778888888888877764
No 22
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=49.51 E-value=28 Score=19.89 Aligned_cols=16 Identities=19% Similarity=-0.056 Sum_probs=9.0
Q ss_pred HHHHHHHHhhhhhhcC
Q psy9323 274 YQIYKEADRQEHMLFR 289 (289)
Q Consensus 274 ~~I~~~l~~~~~~~~r 289 (289)
..++..+||++++.+|
T Consensus 29 ~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 29 LGIGLFMRRRHIVRKR 44 (44)
T ss_dssp HHHHHHHHTTTCCSCC
T ss_pred HHHHHHhhhhHhhccC
Confidence 4455556666655554
No 23
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=43.19 E-value=40 Score=18.34 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy9323 259 CVSFWIPGVIMIYMYYQIYKEADRQEHM 286 (289)
Q Consensus 259 ~~~~~iPl~ii~~~y~~I~~~l~~~~~~ 286 (289)
++...+.+++-++....++++.||..|+
T Consensus 8 ivalivalIiaIVVWtiv~ieYrk~~kQ 35 (36)
T 1pi7_A 8 IVALVVAIIIAIVVWSIVIIEGRGGKKK 35 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555666666777777777777665
No 24
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=33.26 E-value=66 Score=18.31 Aligned_cols=16 Identities=13% Similarity=-0.074 Sum_probs=8.6
Q ss_pred HHHHHHHHhhhhhhcC
Q psy9323 274 YQIYKEADRQEHMLFR 289 (289)
Q Consensus 274 ~~I~~~l~~~~~~~~r 289 (289)
..++..+||++++.+|
T Consensus 28 ~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 28 LTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHTTCSSCCC
T ss_pred HHHHHHhhhhhhhhcc
Confidence 4445556665555544
No 25
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=23.90 E-value=1.1e+02 Score=17.42 Aligned_cols=11 Identities=9% Similarity=0.042 Sum_probs=4.8
Q ss_pred HHHHHhhhhhh
Q psy9323 277 YKEADRQEHML 287 (289)
Q Consensus 277 ~~~l~~~~~~~ 287 (289)
+..+||++++.
T Consensus 32 ~~~~RRR~~~~ 42 (44)
T 2jwa_A 32 GILIKRRQQKI 42 (44)
T ss_dssp HHHHHHHCSCC
T ss_pred Hhheehhhhhc
Confidence 33344544443
Done!