BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9327
(641 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHPT+D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK++ LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 95/131 (72%), Gaps = 3/131 (2%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPN-ATLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHGL EEA L+ T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKE---TFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEG+ + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGK 827
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 44/209 (21%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR------------------IKSVL------------------- 97
+ L +N P +K VL
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLI 220
Query: 98 ---GDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
DD ++K+W + K + T GH + + FH ILS S+D++IR+W
Sbjct: 221 VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK 280
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
R + + HP ++ +
Sbjct: 281 RTGVQTFRRDHDRFWVLAAHPNLNLFAAG 309
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 154/203 (75%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHP++D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 119/209 (56%), Gaps = 27/209 (12%)
Query: 367 ATHGLSEEA---AELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNW---PLLTVS 420
AT GL ++A + E + + LP PE + PP AE + P S
Sbjct: 861 ATEGLGDDALGKGQEEGGGWDVEEDLELP---PELDI--PPGAAGGAEDGFFVPPTKGTS 915
Query: 421 KS-------------FFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPL 467
+ GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP
Sbjct: 916 PTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPC 975
Query: 468 LAPVMAFPTR--KGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLI 525
L + +P R K G+K N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+
Sbjct: 976 LPSMYGYPNRNWKDAGLK-NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILL 1034
Query: 526 SIPLLVVTTKKEIEEAKQIINICKEYIVG 554
S+PLLVV K+EI EA+Q+I IC+EYIVG
Sbjct: 1035 SVPLLVVDNKQEIAEAQQLITICREYIVG 1063
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPN-ATLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHGL EEA L+ T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKE---TFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 44/209 (21%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR------------------IKSVL------------------- 97
+ L +N P +K VL
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLI 220
Query: 98 ---GDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
DD ++K+W + K + T GH + + FH ILS S+D++IR+W
Sbjct: 221 VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK 280
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
R + + HP ++ +
Sbjct: 281 RTGVQTFRRDHDRFWVLAAHPNLNLFAAG 309
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 154/203 (75%), Positives = 169/203 (83%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QQP+FVSGG DDYKIKVWNYK R+C+FTLLGH
Sbjct: 61 KQQPLFVSGG----------------------------DDYKIKVWNYKLRRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+CVLTGHNHYVMCAQFHP++D+VVS
Sbjct: 93 LDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDISGLRKKN++PG
Sbjct: 153 ASLDQTVRVWDISGLRKKNLSPG 175
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK++ LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + ++P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPN-ATLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYL+AATHGL EEA L+ T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEAESLKE---TFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 44/209 (21%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR------------------IKSVL------------------- 97
+ L +N P +K VL
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLI 220
Query: 98 ---GDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
DD ++K+W + K + T GH + + FH ILS S+D++IR+W
Sbjct: 221 VSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSK 280
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
R + + HP ++ +
Sbjct: 281 RTGVQTFRRDHDRFWVLAAHPNLNLFAAG 309
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 166/231 (71%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
N QP+FVSGG DDYKIKVWNYK +C+FTLLGH
Sbjct: 61 NSQPLFVSGG----------------------------DDYKIKVWNYKNHRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P + L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGH 203
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 13/135 (9%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KHT+ I ++K+ C +HE RVKSGAWD++GVFIYTT NHIKY + NGD GIIRTLD+P
Sbjct: 510 KHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGER 349
IYITK+ GN ++ LDR+ + I+ TE+ FKL+L+ +Y+ V+ +++NS+L
Sbjct: 570 IYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMSMIKNSQL------- 622
Query: 350 IKILKSCGQTSLAYL 364
CGQ +AYL
Sbjct: 623 ------CGQAMIAYL 631
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GIIRTLD+PIYITK+ GN ++ LDR+ + I+ TE+ FKL+L+
Sbjct: 549 NHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
+Y+ V+ +++NS+L GQ++IAYLQQK
Sbjct: 609 RYDHVMSMIKNSQLCGQAMIAYLQQK 634
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 106/183 (57%), Gaps = 14/183 (7%)
Query: 377 ELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFKLLH 436
EL++ +A+ +++ P+ PV+++ + L ++ GSF+TA +LLH
Sbjct: 886 ELDTPKASANARSSVFVTPPQGM------PVSQSWSQKSSLAAEQAA-AGSFDTAMRLLH 938
Query: 437 DQIGVKNFLPYRQMFLNSYLQSRT---AYSTLPL--LAPVMAFPTRKGPGIKENSHPATN 491
Q+G+KNF P + MFL+ + S + A+S+ P+ LA + P ++ S PA
Sbjct: 939 RQLGIKNFTPLKSMFLDLFNGSHSYLRAFSSCPVVPLAIERGWSESSSPNVR--SPPALV 996
Query: 492 IKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEY 551
QL K++ Y+ TT+GKF +A+ ++L +IPL+VV T++E++E K++I I KEY
Sbjct: 997 YDFSQLDEKLKSGYKATTTGKFTEALRLFLSILHTIPLVVVETRREVDEVKELIVIVKEY 1056
Query: 552 IVG 554
++G
Sbjct: 1057 VLG 1059
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 322 KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESN 381
KL I V+ N+ +G+V ER+KIL++ G LAY+TA+ HGL++ A L +
Sbjct: 720 KLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATE 779
Query: 382 LRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETA 431
L D +LP + LL PP P+ +WPLL V K FEG E+A
Sbjct: 780 L--GDNVPSLPEGKTPS-LLMPPTPIM-CGGDWPLLRVMKGIFEGGLESA 825
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
SFHPK ++S+ + +++WD + L +K P I Q + GG ++
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWD--IGALRKK---TVSPADDIMRLTQMNSDLFGGVDAIV 196
Query: 76 AYQGCILESRNE--------PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
Y +LE + P L I S DD ++K+W + K + TL GH++ +
Sbjct: 197 KY---VLEGHDRGVNWAAFHPTLPLIVSG-ADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
+ FH + I+S S+D++IR+W R + + HP +++ +
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAG 308
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 157/203 (77%), Gaps = 28/203 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
N QP+FVSGG DDYKIKVWNYK +C+FTLLGH
Sbjct: 61 NSQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLLGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHE PWI+SASDDQTIRIW WQSR CI VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPG 203
ASLDQT+RVWDI L+KK+ +P
Sbjct: 153 ASLDQTVRVWDIGALKKKSASPA 175
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 93/135 (68%), Gaps = 13/135 (9%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KHT+ I ++K+ C +HE RVKSGAWD++GVFIYTT NHIKY + NGD GIIRTLD+P
Sbjct: 510 KHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGER 349
IYITK+ GN ++ LDR+ + I+ TE+ FKLAL+ KY+ V+ +++NS+L
Sbjct: 570 IYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQL------- 622
Query: 350 IKILKSCGQTSLAYL 364
CGQ +AYL
Sbjct: 623 ------CGQAMIAYL 631
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GIIRTLD+PIYITK+ GN ++ LDR+ + I+ TE+ FKLAL+
Sbjct: 549 NHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+ V+ +++NS+L GQ++IAYLQQK
Sbjct: 609 KYDHVMSMIKNSQLCGQAMIAYLQQK 634
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRT---AYSTLPL--LAPVMAFPTRKGP 480
GSF+TA +LLH Q+G+KNF P + MFL+ + S + A+S+ P+ LA + P
Sbjct: 929 GSFDTAMRLLHRQLGIKNFAPLKSMFLDLFSGSHSYLRAFSSSPVVPLAIERGWSESSSP 988
Query: 481 GIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEE 540
++ PA QL AK++ Y+ TT+GK +A+ ++L +IPL+VV +++E++E
Sbjct: 989 NVR--GPPALVFDFSQLEAKLKSGYKATTAGKLSEALRVFLSILQTIPLVVVESRREVDE 1046
Query: 541 AKQIINICKEYIVG 554
K+++ I KEY++G
Sbjct: 1047 VKELVIIVKEYVLG 1060
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 322 KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESN 381
KL I V+ N+ +G+V ER+KIL++ G LAY+TA+ HGL++ A L
Sbjct: 720 KLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDIAERLAIE 779
Query: 382 LRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETA 431
L D +LP + LL PP+P+ +WPLL V K FEG E+A
Sbjct: 780 L--GDNVPSLPEGKTPS-LLMPPSPIM-CGGDWPLLRVMKGIFEGGLESA 825
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 51/217 (23%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS--- 68
++ + FH + PWI+S+ + I++W+++ T + H V FH ++ + VS
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 69 ----------------------------------GGKMIVMAYQGCILESRNE------- 87
GG ++ Y +LE +
Sbjct: 156 DQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFGGVDAIVKY---VLEGHDRGVNWASF 212
Query: 88 -PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144
P L I S DD ++K+W + K + TL GH++ + + FH + I+S S+D++
Sbjct: 213 HPTLPLIVSG-ADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKS 271
Query: 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
IR+W R I + HP +++ +
Sbjct: 272 IRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAG 308
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 164/231 (70%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 92/135 (68%), Gaps = 13/135 (9%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KH + I N+K+ C +HE RVKSGAWDE+GVFIYTT NHIKY + NGD GII+TLD+P
Sbjct: 510 KHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVP 569
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGER 349
IYIT+ GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V+ +++NS+L
Sbjct: 570 IYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRKRYDHVMSMIKNSQL------- 622
Query: 350 IKILKSCGQTSLAYL 364
CGQ ++YL
Sbjct: 623 ------CGQAVISYL 631
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GII+TLD+PIYIT+ GN ++ LDR+ ++ +D +E+ FKLAL+
Sbjct: 549 NHIKYCLPNGDSGIIKTLDVPIYITRAIGNNIFCLDRDGKNKLITVDASEYIFKLALLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
+Y+ V+ +++NS+L GQ++I+YLQQK
Sbjct: 609 RYDHVMSMIKNSQLCGQAVISYLQQK 634
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 107/198 (54%), Gaps = 23/198 (11%)
Query: 403 PPAPVAEAETNWPLLTVSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRT-- 460
P PV++ T L + G+F+TA +LL Q+G+KNF P + +FL+ ++ S +
Sbjct: 909 PGMPVSQIWTQKSSLA-GEHAAAGNFDTAMRLLSRQLGIKNFAPLKPLFLDLHMGSHSYL 967
Query: 461 -AYSTLPLLAPVM--------AFPTRKGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSG 511
A +T P++ PV A P +GP PA Q+ +++ Y+ TT G
Sbjct: 968 RALATAPII-PVAVEKGWSESASPNVRGP-------PALVFTFSQMEDRLKAAYKATTEG 1019
Query: 512 KFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTN-HIKYAIVNGDHGII 570
KF +A+ + N+L +IPL+VV +++E++E K++I I +EY++G +K + D +
Sbjct: 1020 KFPEALRQFLNILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELRDD--VN 1077
Query: 571 RTLDLPIYITKIKGNQVY 588
R +L Y T K +V+
Sbjct: 1078 RQQELAAYFTNCKLQRVH 1095
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 314 IDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSE 373
+D F K+A N+ H N+ +G+ +R++IL++ GQ LAY+TAATHGL+E
Sbjct: 715 MDKVGFMCKIAGQNNNLMGQFH---NALYLGDAMKRVEILENAGQLPLAYITAATHGLTE 771
Query: 374 EAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A L + L P +LP + LL PPAP+ A +WPLL V + FEG + K
Sbjct: 772 IADRLAAELGENIP--SLPEGKTRS-LLIPPAPLT-ASGDWPLLRVMRGIFEGGLDATGK 827
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 19/176 (10%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
SFHPK ++S+ + +++WD + L +K P I Q + GG V+
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWD--IGALRKK---TVSPADDILRLTQMNTDLFGGVDAVV 196
Query: 76 AYQGCILESRNE--------PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
Y +LE + P L I S DD ++K+W K + TL GH++ +
Sbjct: 197 KY---VLEGHDRGVNWASFHPTLPLIVSG-ADDRQVKLWRMNDTKAWEVDTLRGHMNNVS 252
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
FH + I+S S+D++IR+W R I + HP +++ +
Sbjct: 253 CVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAAHPEMNLLAAG 308
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 164/231 (70%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHEYPWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDI LRKK V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 13/151 (8%)
Query: 214 KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273
K+ +W KH + I N+K+ C +HE RVKSGAWDE+GVFIYTT NHIKY
Sbjct: 494 KYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKY 553
Query: 274 AIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEV 333
+ NGD GII+TLD+PIYIT++ GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V
Sbjct: 554 CLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHV 613
Query: 334 LHIVRNSRLVGEVGERIKILKSCGQTSLAYL 364
+ +++NS+L CGQ ++YL
Sbjct: 614 MSMIKNSQL-------------CGQAVISYL 631
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 68/86 (79%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GII+TLD+PIYIT++ GN ++ LDR+ ++ +D +E+ FKLAL+
Sbjct: 549 NHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
+Y+ V+ +++NS+L GQ++I+YLQQK
Sbjct: 609 RYDHVMSMIKNSQLCGQAVISYLQQK 634
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 96/170 (56%), Gaps = 12/170 (7%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKG------ 479
G+F+TA +LL Q+G+KNF P + +F++ ++ S + L AP++ KG
Sbjct: 931 GNFDTAMRLLSRQLGIKNFAPLKPLFVDLHMGSHSYLRALAT-APIIPIAVEKGWSESAS 989
Query: 480 PGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIE 539
P ++ PA Q+ +++ Y+ TT GKF +A+ + ++L +IPL+VV +++E++
Sbjct: 990 PNVR--GPPALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDSRREVD 1047
Query: 540 EAKQIINICKEYIVGTN-HIKYAIVNGDHGIIRTLDLPIYITKIKGNQVY 588
E K++I I +EY++G +K + D + R +L Y T K +V+
Sbjct: 1048 EVKELIEIVREYVLGLRMELKRKELRDD--VNRQQELAAYFTNCKLQRVH 1095
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 314 IDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSE 373
+D F K+A N+ H N+ +G+ +R++IL++ GQ LAY+TA THGL+E
Sbjct: 715 MDKVGFMCKIAGQNNNLMGQFH---NALYLGDALKRVEILENAGQLPLAYITATTHGLTE 771
Query: 374 EAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A L + L P +LP + LL PPAP+ A +WPLL V FEG + K
Sbjct: 772 IADRLAAELGENIP--SLPEGKARS-LLIPPAPLT-ASGDWPLLRVMHGIFEGGLDATGK 827
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 51/217 (23%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS--- 68
++ + FH + PWI+S+ + I++W+++ T + H V FH ++ + VS
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 69 ----------------------------------GGKMIVMAYQGCILESRNE------- 87
GG V+ Y +LE +
Sbjct: 156 DQTVRVWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVKY---VLEGHDRGVNWASF 212
Query: 88 -PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144
P L I S DD ++K+W K + TL GH++ + FH + I+S S+D++
Sbjct: 213 HPTLPLIVSG-ADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
Query: 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
IRIW R I + HP +++ +
Sbjct: 272 IRIWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAG 308
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 165/231 (71%), Gaps = 28/231 (12%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHP+RPWIL+SLH+GVIQ+WDYRM TLL++FDEH+GPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYK +C+FTL GH
Sbjct: 61 ATQPLFVSGG----------------------------DDYKIKVWNYKTHRCLFTLHGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDYIRT FHHE PWI+SASDDQTIRIW WQSR C+ VLTGHNHYVMCA FHP +D+VVS
Sbjct: 93 LDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231
ASLDQT+RVWDIS LRKK+V+P L L+ + VKY H
Sbjct: 153 ASLDQTVRVWDISALRKKSVSPADDILRLTQMNTDLFGGVDAVVKYVLEGH 203
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 13/151 (8%)
Query: 214 KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273
K+ +W KH + I N+K+ C +HE RVKSGAWDE+GVFIYTT NHIKY
Sbjct: 494 KYVVWSSDMESVALLSKHAVVIANKKLVHRCTLHETIRVKSGAWDENGVFIYTTLNHIKY 553
Query: 274 AIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEV 333
+ NGD GII+TLD+PIYIT++ GN ++ LDR+ ++ +D +E+ FKLAL+ +Y+ V
Sbjct: 554 CLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHV 613
Query: 334 LHIVRNSRLVGEVGERIKILKSCGQTSLAYL 364
+ +++NS+L CGQ ++YL
Sbjct: 614 MSMIKNSQL-------------CGQAVISYL 631
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 68/86 (79%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GII+TLD+PIYIT++ GN ++ LDR+ ++ +D +E+ FKLAL+
Sbjct: 549 NHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLVTVDASEYIFKLALLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
+Y+ V+ +++NS+L GQ++I+YLQQK
Sbjct: 609 RYDHVMSMIKNSQLCGQAVISYLQQK 634
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 99/175 (56%), Gaps = 22/175 (12%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRT---AYSTLPLLAPVM--------AF 474
G+F+TA +LL Q+G+KNF P + +FL+ ++ S + A +T P++ PV A
Sbjct: 931 GNFDTAMRLLSRQLGIKNFAPLKPLFLDLHMGSHSYLHALATAPII-PVAVEKGWSESAS 989
Query: 475 PTRKGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTT 534
P +GP PA Q+ +++ Y+ TT GKF +A+ + ++L +IPL+VV +
Sbjct: 990 PNVRGP-------PALVFTFPQMEDRLKAAYKATTDGKFPEALRQFLSILHTIPLIVVDS 1042
Query: 535 KKEIEEAKQIINICKEYIVGTN-HIKYAIVNGDHGIIRTLDLPIYITKIKGNQVY 588
++E++E K++I I +EY++G +K + D + R +L Y T K +V+
Sbjct: 1043 RREVDEVKELIEIVREYVLGLRMELKRKELRDD--VNRQQELAAYFTNCKLQRVH 1095
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 314 IDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSE 373
+D F K+A N+ H N+ +G+ +R++IL++ GQ LAY+TA THGL+E
Sbjct: 715 MDKVGFMCKIAGQNNNLMGQFH---NALYLGDAMKRVEILENAGQLPLAYITATTHGLTE 771
Query: 374 EAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A L + L P +LP + LL PPAP+ A +WPLL V + FEG + K
Sbjct: 772 IADRLAAELGENIP--SLPEGKARS-LLIPPAPLT-ASGDWPLLRVMRGIFEGGLDATGK 827
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
SFHPK ++S+ + +++WD ++ L +K P I Q + GG V+
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWD--ISALRKK---SVSPADDILRLTQMNTDLFGGVDAVV 196
Query: 76 AYQGCILESRNE--------PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
Y +LE + P L I S DD ++K+W K + TL GH++ +
Sbjct: 197 KY---VLEGHDRGVNWASFHPTLPLIVSG-ADDRQVKIWRMNDTKAWEVDTLRGHMNNVS 252
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
FH + I+S S+D++IRIW R I + HP +++ +
Sbjct: 253 CVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHPEMNLLAAG 308
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 153/202 (75%), Gaps = 28/202 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE++S+R KG++FHP +PWIL+SLHNG IQLWDYRM TLL++FD H+GPVRGI FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYK+ VWNYK RK +F+L GH
Sbjct: 63 PTQPLFVSGG----------------------------DDYKVNVWNYKSRKLLFSLCGH 94
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
+DY+R FHHEYPWILS SDDQTIRIW WQSRNCI +LTGH+HYVMCA FHP++D++VS
Sbjct: 95 MDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVS 154
Query: 181 ASLDQTIRVWDISGLRKKNVAP 202
ASLDQT+RVWDISGLR KN AP
Sbjct: 155 ASLDQTVRVWDISGLRMKNAAP 176
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 169/371 (45%), Gaps = 44/371 (11%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP + ILS+ + I++WD T ++ F I H + +F + VM
Sbjct: 264 FHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMV 323
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF------- 129
++ LE I ++L + + + +Y + T + + ++ + +
Sbjct: 324 FK---LERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTVASVKHLGSAWLPPRSLSY 380
Query: 130 --HHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
+ + S++D+ + SR N + + A F + V + DQT
Sbjct: 381 NPAEKVALLTSSADNGVYELVNVSSRSNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQT 440
Query: 187 IRVWDISGLRKKNVA----------PGMGKLVLSMKS---------------------KH 215
I + D+S K + GMG ++LS + K+
Sbjct: 441 IEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQVHLFDLQQKKIVSSFNANRVKY 500
Query: 216 PIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275
+W KH ++I + +E + +IHE R+KS W E+ V +Y T +H+KYA+
Sbjct: 501 VVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIKSAVWVENNVLLYATLDHLKYAL 560
Query: 276 VNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLH 335
++GD G+I+TL+ +Y+ K KGN V+ L+R P IDPTE+ FKLAL+ YE+VLH
Sbjct: 561 MSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRKDYEQVLH 620
Query: 336 IVRNSRLVGEV 346
+++NS LVG+
Sbjct: 621 LIQNSNLVGQA 631
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
+H+KYA+++GD G+I+TL+ +Y+ K KGN V+ L+R P IDPTE+ FKLAL+
Sbjct: 554 DHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRK 613
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
YE+VLH+++NS LVGQ+IIAYLQ+K
Sbjct: 614 DYEQVLHLIQNSNLVGQAIIAYLQKK 639
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ +FH + PWILS + I++W+++ + H V FH + + VS
Sbjct: 98 VRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASL 157
Query: 71 KMIVMAYQGCILESRNE-PCLFRIKSVLGDDYKI---KVWNYKQRKCIFTLLGHLDYIRT 126
V + L +N P ++ L + ++ F L GH +
Sbjct: 158 DQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNW 217
Query: 127 TFFHHEYPWILSASDDQTIRIW------YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
FH P ILSA DD+ +++W W+ C GH + V C FHP ++++S
Sbjct: 218 CAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTC----RGHFNNVSCCLFHPHQELILS 273
Query: 181 ASLDQTIRVWDIS 193
AS D+TIRVWD++
Sbjct: 274 ASEDKTIRVWDLN 286
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 196/485 (40%), Gaps = 86/485 (17%)
Query: 13 KGLSFHP--KRPWILSSLHNGVIQLWDY--RMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ LS++P K + SS NGV +L + R N+L K D +GP IFV+
Sbjct: 376 RSLSYNPAEKVALLTSSADNGVYELVNVSSRSNSLPLK-DNIKGP-------GDDAIFVA 427
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT- 127
+ V + +E IK + K K R F +GH+ T
Sbjct: 428 RNRFAVFSRSDQTIE---------IKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQ 478
Query: 128 --FFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV--------MCAQFHPT--- 174
F + I+S+ + ++ W + N L G HYV + H T
Sbjct: 479 VHLFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLG-KHYVYIVKKNLELITSIHETIRI 537
Query: 175 -------DDIVVSASLDQ---TIRVWDISGLRKKN----VAPGMGKLVLSM-KSKHPIWK 219
+++++ A+LD + D ++ + G +V ++ ++ P+
Sbjct: 538 KSAVWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSF 597
Query: 220 YCKPVKYCNPKHTLHICNRKMEPLCNIHENTRV----------KSGAWDESGVFIYTTSN 269
P +Y L + + E + ++ +N+ + K G + + F+ S
Sbjct: 598 EIDPTEYL---FKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPST 654
Query: 270 HIKYAIVNGDHG----IIRTLDLPIYITKIKGNQVYYLDR---ECSPHVLR-IDPTEFKF 321
+ A+ G+ + RT+D P +++ + + Y + E + LR + F +
Sbjct: 655 RFELALECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLY 714
Query: 322 ----------KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGL 371
K+A+I K + L + +NS + EV RI IL+ G +AYLTA ++GL
Sbjct: 715 LITGNAEKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGL 774
Query: 372 SEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAET-NWPLLTVSKSFFEGSFET 430
E+A ++ S+ + LP++ P PV E T NWPLL S S FE S +
Sbjct: 775 EEKAQQILSHCNKTEEEIKLPSL---GSAFTTPVPVNETYTHNWPLLDTSHSTFEKSLQE 831
Query: 431 AFKLL 435
+ L
Sbjct: 832 RMEQL 836
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKEN 485
G FE+A K+L+ Q+G NF P + FL Y SR T+ L P++++ R+ E
Sbjct: 923 GDFESAMKILNKQVGAINFSPLKTRFLEIYTASRVYLPTISGLDPLVSY-VRRNAETAER 981
Query: 486 SH--PATNIKLEQLIA-KIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAK 542
S P L + + ++ + Y+L + K ++A R+++ V +++E +E
Sbjct: 982 SQALPFITRNLASIKSHELHEAYRLVKANKILEAQICFRSIIYLALTTVANSEEEADEIS 1041
Query: 543 QIINICKEYIVGTNHIKYAIVNGDHGIIRTLDLPIYIT 580
+I+ C YIV + G+ R L+L Y
Sbjct: 1042 ALIDECCRYIVALSCELERRRLGEEDTKRALELSYYFA 1079
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 150/215 (69%), Gaps = 28/215 (13%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS R KG++FHP RPW+L +L + IQLWDYRM TLL +F++HEGPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QPIFVS G DDY IKVW+ KC++TL GH
Sbjct: 63 PTQPIFVSAG----------------------------DDYTIKVWSLDTNKCLYTLTGH 94
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
LDY+RT FFH E PWI+SASDDQTIRIW WQ+R I LTGHNH+VMCAQFHPTDD++VS
Sbjct: 95 LDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVS 154
Query: 181 ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
ASLD+TIR+WDISGLRK++ APG M ++
Sbjct: 155 ASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQ 189
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 178/378 (47%), Gaps = 50/378 (13%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V + FHP + I+S + +++WD T +++F I H +F +
Sbjct: 256 VDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHD 315
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVL---GDDYKIKVWNYKQRKCIF---TLLG---HLD 122
+M ++ R PC F ++ L + +I+ +N+++R +L G D
Sbjct: 316 SGIMVFK----LDRERPCSFIHQNQLFFVNAEKQIQSFNFQKRVASLPYASLKGIGQPWD 371
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYW--------------QSRNCICVLTGHNHYVMC 168
R+ ++ +L + + Q G N +V+
Sbjct: 372 AFRSISYNPSQHSVLVNEANGKFALVILPKQPVGAVEPTSVTQDTGNFATFVGRNRFVVY 431
Query: 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL----------SMKSKHPIW 218
+ T+ + V + ++ R + + VA G G +++ + K
Sbjct: 432 NK--NTESVEVRSLENKVTRNIKVEETVRTIVAAGPGSVLVIHPREVILYDVQQGKKVSQ 489
Query: 219 KYCKPVKYCN-----------PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTT 267
K VKY + KHT+ + +K+E + ++HE R+KS AWDE+GV IY+T
Sbjct: 490 LAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWDETGVLIYST 549
Query: 268 SNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 327
NHI+Y+++NGD GII+TL+ +YITK++G VY L+RE +L IDPTE++FK AL+N
Sbjct: 550 LNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYRFKKALVN 609
Query: 328 HKYEEVLHIVRNSRLVGE 345
+ EVL ++++S LVG+
Sbjct: 610 KNFPEVLRLIKDSNLVGQ 627
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 68/85 (80%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHI+Y+++NGD GII+TL+ +YITK++G VY L+RE +L IDPTE++FK AL+N
Sbjct: 551 NHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYRFKKALVNK 610
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQ 640
+ EVL ++++S LVGQ+II+YLQ+
Sbjct: 611 NFPEVLRLIKDSNLVGQNIISYLQK 635
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Query: 386 DPNATLPTVHPEAQLLRPPAPVAEA----ETNWPLLTVSKSFFEGSFETAFKLLHDQIGV 441
D LP + ++ P V A + P + V+ G+F+ A + L Q+GV
Sbjct: 878 DVGEELPEEVEQGEITSPAQEVETAIWIKNSKLPAVLVAA----GAFDAAVQALSKQVGV 933
Query: 442 KNFLPYRQMFLNSYLQSRTAYSTLPLLAPV-MAFPTRKGPGIKENSHPATNIKLEQLIAK 500
P ++ F N Y RT + P P + + + E+ L+ + K
Sbjct: 934 VKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVPGLDVVNEK 993
Query: 501 IQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIKY 560
+ + Y+ K AIE R + I LL+V ++ + A +I+ +EYI+G +
Sbjct: 994 MNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELE 1053
Query: 561 AIVNGDHGIIRTLDLPIYITKIK 583
+ +R L+L Y TK K
Sbjct: 1054 RRSLKEGNTVRMLELAAYFTKAK 1076
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ---QPIFVSGG--- 70
FHP I+S+ + I++WD ++ L ++ H P F Q Q + G
Sbjct: 145 FHPTDDLIVSASLDETIRIWD--ISGLRKR---HSAPGTS-SFEEQMSAQQNLLDGSLGD 198
Query: 71 ---KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
K I+ + + + P L I S DD ++K+W K + T GH + +
Sbjct: 199 CVVKFILEGHTRGVNWASFHPTLPLIVSG-SDDRQVKLWRMSATKAWEVDTCRGHTNNVD 257
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
+ FH I+S +D+T+R+W R + N HP
Sbjct: 258 SVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHP 305
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 146/198 (73%), Gaps = 28/198 (14%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
ML KFETK++RVKGLSFHP RPWIL+SLH+G I L+DYR+ TLLEKFDEHEGPVRGI FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
QP+FVSGG DDYKIKVWNYKQR+C+FTL GH
Sbjct: 61 MTQPLFVSGG----------------------------DDYKIKVWNYKQRRCLFTLKGH 92
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
DYIR+ FH E PWI+S+SDD IRIW WQSR CI L GHNHYVM A FHP DD+VVS
Sbjct: 93 KDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVS 152
Query: 181 ASLDQTIRVWDISGLRKK 198
ASLDQTIR+WDISGL+KK
Sbjct: 153 ASLDQTIRIWDISGLKKK 170
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 81/112 (72%)
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITK 294
+ N+K+E +C IHE KSG WD++GVFIY+TSNH+KY + NGD+G IRTL+ IYIT
Sbjct: 506 LANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITG 565
Query: 295 IKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEV 346
+K N+V+ +DRE ++ ID TE+ KL+L+ Y +V+ I+R +RLVG+
Sbjct: 566 VKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNYNQVMTILRENRLVGKA 617
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 65/87 (74%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NH+KY + NGD+G IRTL+ IYIT +K N+V+ +DRE ++ ID TE+ KL+L+
Sbjct: 539 SNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQ 598
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
Y +V+ I+R +RLVG++IIAYLQ+K
Sbjct: 599 QNYNQVMTILRENRLVGKAIIAYLQKK 625
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 400 LLRPPAPVAEAETNWPLLT--VSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQ 457
L PP P W + GSFE+A +L+ QIG NF P + MF+N ++
Sbjct: 906 LFVPPQPGPSFSMIWARNSQFAVDHIAAGSFESAMNILNSQIGAVNFDPIKSMFMNIFMA 965
Query: 458 SRTAY----STLPLLAPVMAFPTRKGPGIKENSHPATNIKLEQLIAKIQ-QCYQLTTSGK 512
+R++ ST LL P+ ++++ P L LI +++ Y+ TT GK
Sbjct: 966 TRSSLGCNASTPSLLMPIQ----------RKSAAPYITYGLGHLIERLKTNAYKSTTEGK 1015
Query: 513 FVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVG 554
F DA+ +L +I V K+E+ E K +INIC+EYI+G
Sbjct: 1016 FNDALSHFTYILHTIIFCSVDNKQEVNELKDLINICREYILG 1057
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 325 LINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRT 384
+I+++ +++ S +G+V ERIKIL+ G LAY+TA+ HGL+E+A + NL T
Sbjct: 711 MISYESSDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKAESI-GNLIT 769
Query: 385 ADPNATLPTVHPEAQLLRPPAPV--AEAETNWPLLTVSKSFFEGSFETAF 432
+D + LP + ++ LL PP+P+ E NWPLLT +KS + E F
Sbjct: 770 SDGKSQLPQLPKQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGENRF 819
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+++ FD E PVR F ++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY I H DY
Sbjct: 70 QWVVAG----------------------------ADDMFIRVYNYNTMDKIKVFEAHADY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRN-CICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W+ C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI++W++
Sbjct: 162 SLDRTIKIWNLG 173
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 249 NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQ--VYYLDRE 306
N RV++G W FIYT S+ V G+ + LD P+Y+ NQ VY +D+E
Sbjct: 521 NERVRTGLW-VGDCFIYTNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKE 579
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWILSSL++G + +WDY+ T+++ F+ E PVR F +++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + H DY
Sbjct: 70 QWVVAG----------------------------ADDMFIRVYNYNTMDKVKVFEAHTDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYW-QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W + C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+T ++W +
Sbjct: 162 SLDRTTKIWSLG 173
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 246 IHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQ--VYY 302
+HE N RV++G W FIY S+ V G+ + LD P+Y+ NQ VY
Sbjct: 518 LHEVNERVRTGIW-VGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYL 576
Query: 303 LDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLA 362
+D+E + + L+LI +K ++R G++ IL S +
Sbjct: 577 IDKE-------FNVMGYTLLLSLIEYK----TLVMR-----GDIERANDILPSIPKAQYN 620
Query: 363 YLT--AATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLL 417
+ + G+ EEA E+ ++ AD L + ++ + A A++E+ W L
Sbjct: 621 NVAHFLESRGMLEEALEIATD---ADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQL 674
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+ + F+ E PVR F ++
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + H DY
Sbjct: 70 QWVVAG----------------------------ADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W++ C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI++W++
Sbjct: 162 SLDRTIKIWNLG 173
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+++ H PWIL++ T+ IW +Q++ V A+F P VV+ +
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGAD 77
Query: 184 DQTIRVWDISGLRKKNV 200
D IRV++ + + K V
Sbjct: 78 DMYIRVYNYNTMDKVKV 94
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 246 IHENT-RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQ--VYY 302
+HEN RV++G W FIY S+ V G+ + LD P+Y+ NQ VY
Sbjct: 518 LHENDERVRTGIW-VGDCFIYNNSSWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYL 576
Query: 303 LDRE 306
+D+E
Sbjct: 577 VDKE 580
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PWILSSL++G + +W+Y+ T+++ F+ E PVR F ++
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + H DY
Sbjct: 70 QWIVAG----------------------------ADDMFIRVYNYNTMDKVKVFEAHTDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYW-QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W + C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+T++VW +
Sbjct: 162 SLDRTVKVWSLG 173
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 30/191 (15%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +S RVKG+ FHP PW+L++L++G ++LW+Y + E PVR
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA-------- 60
Query: 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI 124
GK I A + I+ V DD++I+V+NY + + H DYI
Sbjct: 61 -----GKFI--ARKNWII-------------VGSDDFRIRVFNYNTGEKVVDFEAHPDYI 100
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-CVLTGHNHYVMCAQFHPTD-DIVVSAS 182
R+ H P++LS SDD T+++W W++ + GH H+VMC F+P D S
Sbjct: 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160
Query: 183 LDQTIRVWDIS 193
LD+T++VW +
Sbjct: 161 LDRTVKVWSLG 171
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S R K + HP PWILSSL++G + +W+Y+ T+++ F+ E PVR F ++
Sbjct: 10 KLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + H DY
Sbjct: 70 QWVVAG----------------------------ADDMFIRVYNYNTMDKVKVFEAHTDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYW-QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W + C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTQPFVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+T++VW +
Sbjct: 162 SLDRTVKVWSLG 173
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PWIL+SL++G + +W+Y+ + + F+ E PVR F ++
Sbjct: 10 KLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + H DY
Sbjct: 70 QWVVAG----------------------------ADDMYIRVYNYNTMDKVKVFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++LS+SDD I++W W+ C + GH+HYVM F+P D + SA
Sbjct: 102 IRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI++W++
Sbjct: 162 SLDRTIKIWNLG 173
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 26/167 (15%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQQ 63
FE S ++ ++ HP P++LSS + +I+LWD+ + F+ H V + F+ +
Sbjct: 95 FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKD 154
Query: 64 P-IFVSGG---------------KMIVMAYQ---GCI--LESRNEPCLFRIKSVLGDDYK 102
F S + A+Q C+ ++P L DD+
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLI----TGSDDHT 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 211 AKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTG----------------------------ADDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D + SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISG----ADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTG----------------------------ADDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D + SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS----GADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTG----------------------------ADDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D + SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS----GADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTG----------------------------ADDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D + SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISG----ADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGCDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGNAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 97/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTG----------------------------ADDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D + SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS----GADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD +I+V+NY + + H DY
Sbjct: 70 NWVVTGA----------------------------DDMQIRVFNYNTLERVHMFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDD-IVVSA 181
IR H P+IL++SDD I++W W + +C V GH HYVM +P D+ SA
Sbjct: 102 IRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+TI+VW +
Sbjct: 162 SLDRTIKVWQLG 173
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 132/339 (38%), Gaps = 57/339 (16%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH--- 60
FE S ++ ++ HP +P+IL+S + +I+LWD+ + + F+ H V I +
Sbjct: 95 FEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKD 154
Query: 61 NQQPIFVSGGKMIVMAYQG----------------CI--LESRNEPCLFRIKSVLGDDYK 102
N Q S + I + G CI ++P L DD
Sbjct: 155 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS----GADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ T GH + FH E P I++ S+D T+RIW+ + L
Sbjct: 211 VKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTL--- 267
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHPIWK 219
+Y M RVW ++ LR NVA G G +++ + + P
Sbjct: 268 -NYGM-------------------ERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMS 307
Query: 220 YCKPVKYCNPKHT-LHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNH---IKYA 274
K KH+ + N K I + R+ D IY T H ++
Sbjct: 308 MDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFV 367
Query: 275 IVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR 313
+V GD I + + Q + + S + +R
Sbjct: 368 VVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIR 406
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 30/189 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K + + RVK + FHP PW+++S +NG + +W+Y TL+ FD ++ P+R F ++
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
FV G DD++++V+NY + + H DY
Sbjct: 69 NWFVCGS----------------------------DDFQVRVYNYNTGEKVTQFEAHPDY 100
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
IR H P++L++SDD TI+ + W S C+ GH+ YVM +P D + S+
Sbjct: 101 IRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASS 160
Query: 182 SLDQTIRVW 190
LD T++VW
Sbjct: 161 CLDGTVKVW 169
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+T+FE ++ L HP +P++L+S + I+ +++ M+ ++ F+ H V + +
Sbjct: 91 VTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAIN 150
Query: 61 NQQP-IFVSG---GKMIVMAYQGCILE-----------------SRNEPCLFRIKSVLGD 99
+ F S G + V ++ + + ++P L GD
Sbjct: 151 PKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLI----TAGD 206
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
D IKVW+Y+ + C+ L GH + + FFH ++P I+S S+D T++IW+
Sbjct: 207 DNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWH 256
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
++ +WNY + + + + IR F W + SDD +R++ + + +
Sbjct: 37 QVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEA 96
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRV--WDIS 193
H Y+ HPT ++++S D TI+ WD+S
Sbjct: 97 HPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMS 130
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 31/193 (16%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQ 62
K T+S RVK + HP PWIL+SL++G + +W+Y +++ F+ PVR F +
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122
+ V+G DD I+V+NY + I + H D
Sbjct: 70 KQWIVTGS----------------------------DDTYIRVYNYNTMEKIKSFEAHAD 101
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIW-YWQSRNCICVLTGHNHYVMCAQFHPTD-DIVVS 180
YIR H P+ILS+SDD I++W Y + + V GH+HYVM ++P D + +
Sbjct: 102 YIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFAT 161
Query: 181 ASLDQTIRVWDIS 193
ASLD+T++VW I+
Sbjct: 162 ASLDKTVKVWSIN 174
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE + ++ + HP P+ILSS + I+LWDY + + F+ H V I ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
Query: 61 NQQPIFVSGGKM--------IVMAYQGCILESRNEPCLFRIKSVLG----------DDYK 102
+ + + I + LE +E + ++ G DD
Sbjct: 153 PKDTNQFATASLDKTVKVWSINSPHPHFTLEG-HEKGINSVEYFSGGEKPYLISGADDKL 211
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+K+W+Y+ + C+ TL GH + + +H E P ILS S+D T+++W+
Sbjct: 212 VKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ ++S RVK + HP PW+L +L+NG + + +Y +++ F+ + PVR F ++
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
++G DD +I+V+NY + + + H DY
Sbjct: 70 NWILTGS----------------------------DDMQIRVFNYNTLEKVHSFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSA 181
+R H P +L++SDD I++W W+ C V GH HYVM F+P D + SA
Sbjct: 102 LRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASA 161
Query: 182 SLDQTIRVWDIS 193
SLD+T++VW +
Sbjct: 162 SLDRTVKVWQLG 173
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ FE V+ F ++ WIL+ + I++++Y + F+ H +R I H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 NQQP-IFVSGGKMIVMAYQ-----GC-------------ILESRNEPCLFRIKSVLGDDY 101
QP + S M++ + C I+ + + F S+ D
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASL---DR 165
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCICVL 159
+KVW FTL GH + ++H + P+++S +DD+ ++IW +Q++ C+ L
Sbjct: 166 TVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GH + FHP IV++ S D T+R+W
Sbjct: 226 EGHAQNISAVCFHPELPIVLTGSEDGTVRIW 256
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 52/237 (21%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY-RMNTLLEKFDEHEGPVRGICFH-NQ 62
FE S ++ ++ HP +P +L+S + +I+LW++ +M F+ H V I F+
Sbjct: 95 FEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKD 154
Query: 63 QPIFVS------------GGKMIVMAYQG------CI--LESRNEPCLFRIKSVLGDDYK 102
F S G +G C+ ++P L DD
Sbjct: 155 NNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISG----ADDRL 210
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+K+W+Y+ + C+ TL GH I FH E P +L+ S+D T+RIW+ +G
Sbjct: 211 VKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWH----------SGT 260
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM--GKLVLSMKSKHP 216
C + RVW IS +R NVA G G +++ + + P
Sbjct: 261 YRLETCLNYGFE-------------RVWTISSMRGTNNVALGYDEGSIIIKVGREEP 304
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 30/189 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP W+L++L+NG + +W+Y TL++ F+ + PVR F ++
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V+G DD I+V+NY + + H DY
Sbjct: 70 SWVVTG----------------------------SDDMHIRVFNYNTLERVHQFEAHSDY 101
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-CVLTGHNHYVMCAQFHPTD-DIVVSA 181
+R+ H P+++S+SDD +++W W ++ + GH HYVM +P D + +A
Sbjct: 102 LRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATA 161
Query: 182 SLDQTIRVW 190
SLD+T++VW
Sbjct: 162 SLDKTVKVW 170
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFHNQ 62
+FE S ++ L HP P+++SS + ++++WD+ + + F+ H V I + +
Sbjct: 94 QFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPK 153
Query: 63 Q-------------PIFVSGGKMIVMAYQG------CILESRNEPCLFRIKSVLGDDYKI 103
++ G + +G C+ + I DD+ +
Sbjct: 154 DNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISG--ADDHLV 211
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K+W+Y+ + C+ TL GH + + FH E P I++ S+D T+R+W+ + L
Sbjct: 212 KIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGL 271
Query: 164 HYVMCAQ 170
V C Q
Sbjct: 272 ERVWCIQ 278
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
LL D ++ H W+L+A + + IW ++++ + + V A+F P
Sbjct: 11 LLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKS 70
Query: 177 IVVSASLDQTIRVWDISGLRK 197
VV+ S D IRV++ + L +
Sbjct: 71 WVVTGSDDMHIRVFNYNTLER 91
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L F+ ++ V + F+P + S + ++LWD + L F H V + F+
Sbjct: 1235 LCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP 1294
Query: 62 QQPIFVSG-GKMIVMAYQGCILESRNEPCLFR-------IKSVL-----------GDDYK 102
+ SG G V + E + CL + SV DD
Sbjct: 1295 DGSMLASGSGDQTVRLW-----EISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQT 1349
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+++W+ +C++T LGH +++ + F + + S S DQT+R+W S C+ L GH
Sbjct: 1350 VRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGH 1409
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
N++V F P ++ S S DQT+R+W+IS
Sbjct: 1410 NNWVGSIVFSPDGTLLASGSDDQTVRLWNIS 1440
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 24/211 (11%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L F+ ++RV+ + F P + S + ++LWD L F H G V + F+
Sbjct: 941 LKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 62 QQPIFVSGGK---------------MIVMAYQGCILESRNEPCLFRIKSVL----GDDYK 102
+ +G I + C+ +F + DD
Sbjct: 1001 DGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCV-----RSVVFSSDGAMLASGSDDQT 1055
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+++W+ C++TL GH +R+ F + + S DDQ +R+W S NC+ L G+
Sbjct: 1056 VRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGY 1115
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+V F P + + S DQ +R+WDIS
Sbjct: 1116 TSWVRFLVFSPNGVTLANGSSDQIVRLWDIS 1146
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ + F P + S + +++LWD L + VR + F +G
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 72 MIVMAYQGCILESRNEPCLFRIK------------------SVLGDDYKIKVWNYKQRKC 113
++ + + ++ CL+ ++ + D +++W+ KC
Sbjct: 1137 DQIVR----LWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKC 1192
Query: 114 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++ L GH ++ + F+ + + S S DQT+R+W S C+C GH +V F+P
Sbjct: 1193 LYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP 1252
Query: 174 TDDIVVSASLDQTIRVWDIS 193
++ S S D+T+R+WDIS
Sbjct: 1253 DGSMLASGSSDKTVRLWDIS 1272
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L F+ + V ++F+P + S + ++LW+ + L F H V + F
Sbjct: 1277 LHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP 1336
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNEPCLFR-------IKSVL-----------GDDYKI 103
+ SG + + + CL+ + SV+ D +
Sbjct: 1337 DGTMLASGSDDQTVR----LWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTV 1392
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
++W+ KC++TL GH +++ + F + + S SDDQT+R+W S C+ L GH
Sbjct: 1393 RLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHI 1452
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD------ISGLRKKNVAPGM 204
+ V F I+ S S D+TI++WD I L+ + + GM
Sbjct: 1453 NSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEKIYEGM 1499
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG-G 70
V+ L F P + + + +++LWD L H V + F SG G
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSG 1178
Query: 71 KMIVMAYQGCILESRNEPCLF-------RIKSVL-----------GDDYKIKVWNYKQRK 112
V + + + CL+ + SV+ D +++W K
Sbjct: 1179 DQTVRLW-----DISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSK 1233
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172
C+ T GH ++ + F+ + + S S D+T+R+W S C+ GH ++V F+
Sbjct: 1234 CLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFN 1293
Query: 173 PTDDIVVSASLDQTIRVWDIS 193
P ++ S S DQT+R+W+IS
Sbjct: 1294 PDGSMLASGSGDQTVRLWEIS 1314
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74
++F P + G+++ W+ L H V + F + SG
Sbjct: 870 VAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS---- 925
Query: 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 134
DD +++W+ +C+ T GH +R+ F
Sbjct: 926 ------------------------DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSL 961
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ S S DQT+R+W S C+ + GH +V F+ ++ + S DQT+R+WDIS
Sbjct: 962 MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDIS 1020
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
++ E + + G++F P + S+ + ++LW+ + EH V + FH
Sbjct: 971 ISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHP 1030
Query: 62 QQPIFVSGG-----KMIVMAYQGCI--LESRNEPCLFRIKSVLGD-------DYKIKVWN 107
Q I +G K+ ++ C+ L ++ L S G D +++W+
Sbjct: 1031 QGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWD 1090
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
+C+ L GH + + + F I + S DQT++IW WQ C+ LTGH ++V
Sbjct: 1091 CCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVF 1150
Query: 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P I+ SAS DQT+R+WD++ + ++ G LV S+
Sbjct: 1151 DIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSV 1194
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGG 70
V + FHP+ I + + ++LW+ L+ EH + G+ + + Q + +
Sbjct: 1023 VYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASA 1082
Query: 71 KMIVMAYQGC------ILESRNEPCLFRIKSVLGD-------DYKIKVWNYKQRKCIFTL 117
V + C IL + I S G+ D +K+W+++Q KC+ TL
Sbjct: 1083 DQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTL 1142
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH +++ F + + SAS DQT+RIW + C + GH H V F P ++
Sbjct: 1143 TGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEV 1202
Query: 178 VVSASLDQTIRVWDISG------LRKKNVAPGM 204
V S S DQT+R+W++ LR K + GM
Sbjct: 1203 VASGSQDQTVRIWNVKTGECLQILRAKRLYEGM 1235
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++FHP + S+ + I+LWD + T L+ H VR + F S
Sbjct: 729 VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA 788
Query: 71 ----KMIVMAYQGCILESRNEPCLFRIKSVLGD---------DYKIKVWNYKQRKCIFTL 117
K+ ++ C+ ++ R + D D IK+WNY +C+ T
Sbjct: 789 DHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTY 848
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+GH + + + + + ++S S D+TI++W Q+ CI L GH + V F P
Sbjct: 849 IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQT 908
Query: 178 VVSASLDQTIRVWD 191
+ SLDQ++R+W+
Sbjct: 909 LACVSLDQSVRLWN 922
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I + G D +K+W+ + CI TL GH + + FH + + SAS D+TI++W Q
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD 757
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
C+ LTGH +V C F P + + S++ D TI++WD+S GK + ++K
Sbjct: 758 GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVS----------QGKCLRTLK 807
Query: 213 SKHPIWKYCKPVKYCNPKHTL 233
S H W + V + TL
Sbjct: 808 S-HTGW--VRSVAFSADGQTL 825
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 14/206 (6%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L ++ + V+ ++F + S + I++W+Y L+ + H V I +
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 62 QQPIFVSGGKMIVMAYQGC--------ILESRNEPCLFRIK------SVLGDDYKIKVWN 107
I VSG + C + NE C + + D +++WN
Sbjct: 863 DSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
+ +C+ G+ D+ F + + S S+D+T+++W WQ+ I L GH ++
Sbjct: 923 CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIY 982
Query: 168 CAQFHPTDDIVVSASLDQTIRVWDIS 193
F P + SAS D ++R+W+IS
Sbjct: 983 GIAFSPDSQTLASASTDSSVRLWNIS 1008
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSG 69
V+ + F P + S + ++LW R ++ HE V + FH + SG
Sbjct: 687 VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASG 746
Query: 70 GKMIVM----------------AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC 113
K I + + C+ S + L + D+ IK+W+ Q KC
Sbjct: 747 DKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA----DHTIKLWDVSQGKC 802
Query: 114 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
+ TL H ++R+ F + + S S D+TI+IW + + C+ GH + V + P
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 174 TDDIVVSASLDQTIRVWD 191
I+VS S D+TI++WD
Sbjct: 863 DSKILVSGSGDRTIKLWD 880
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW K K + GH +++R F + + S D+ +++W + CI L
Sbjct: 663 DCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTL 722
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
TGH H V FHP + + SAS D+TI++WDI
Sbjct: 723 TGHEHEVFSVAFHPDGETLASASGDKTIKLWDI 755
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF--HNQQPIFVSG 69
V +++ P ++S + I+LWD + + ++ H V + F Q VS
Sbjct: 855 VYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSL 914
Query: 70 GKMIVMAYQGCILESRNEPCL------------------FRIKSVLGDDYKIKVWNYKQR 111
+ + + R CL +I + +D +K+W+++
Sbjct: 915 DQSVRL------WNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTG 968
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
K I +L GH D+I F + + SAS D ++R+W + C +L H +V F
Sbjct: 969 KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVF 1028
Query: 172 HPTDDIVVSASLDQTIRVWDIS 193
HP I+ + S D T+++W+IS
Sbjct: 1029 HPQGKIIATGSADCTVKLWNIS 1050
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172
C+FT L I + F E + + D +R+W +S + + GH+++V F
Sbjct: 636 CVFTET--LGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFS 693
Query: 173 PTDDIVVSASLDQTIRVWDI 192
P +I+ S D+ +++W +
Sbjct: 694 PDGEILASCGADENVKLWSV 713
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V + F P +++S+ + I++W+ ++ F H VR + + + S
Sbjct: 193 VSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSN 252
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E C + V+G + K
Sbjct: 253 DQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSR 312
Query: 103 ---IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
IK+W+ CI TL+GH +++R +H +I+SASDD+TIR+W ++++ C L
Sbjct: 313 DKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTL 372
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+ FH + V++ S+DQT++VW+
Sbjct: 373 EAHQHFCTSIDFHRSAPYVITGSVDQTVKVWE 404
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ + F Q + S
Sbjct: 114 FHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLAS-------- 165
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
D IK+W+++ + I T+ GH + + F ++
Sbjct: 166 --------------------CSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFL 205
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+SAS D+TI++W + C+ TGH +V + + ++ S S DQT+RVW ++
Sbjct: 206 ISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVA 262
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ +SF + + S + I+LWD++ ++ H+ V + F +S
Sbjct: 151 VQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASR 210
Query: 71 ----KMIVMAYQGCILESRNEPCLFRIKSVLGD---------DYKIKVWNYKQRKCIFTL 117
KM +A C+ R V D D ++VW ++C L
Sbjct: 211 DKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAEL 270
Query: 118 LGHLDYIRTTFFHHEY------------------PWILSASDDQTIRIWYWQSRNCICVL 159
H + + E P++LS S D+TI++W + CI L
Sbjct: 271 REHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTL 330
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
GH+++V +HP ++SAS D+TIRVWD R
Sbjct: 331 VGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKR 367
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
++L GH I FH Y ++SAS+D TI+IW +++ + L GH V F
Sbjct: 100 YSLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQ 159
Query: 175 DDIVVSASLDQTIRVWDI 192
++ S S D TI++WD
Sbjct: 160 GKLLASCSADMTIKLWDF 177
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 16/222 (7%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF--HNQ 62
E RV+ ++F P + S + I++WD T + + H V + F Q
Sbjct: 921 LEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQ 980
Query: 63 QPIFVSGGKMI-------------VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
+ SG K I + + G + P R+ S DD IK+W+
Sbjct: 981 RVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASG-SDDKTIKIWDTA 1039
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
C TL GH ++++ F + + S SDD TI+IW S C L GH V
Sbjct: 1040 SGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV 1099
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P V S S+D TI++WD + G G V S+
Sbjct: 1100 AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 1141
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 87/222 (39%), Gaps = 16/222 (7%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E V ++F P R + S + I++WD T + + H G V+ + F
Sbjct: 879 LEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQ 938
Query: 65 IFVSGG-----KMIVMAYQGC----------ILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
SG K+ A C +L P R+ S G D IK+W+
Sbjct: 939 RVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG-DKTIKIWDTA 997
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
C TL GH + + F + + S SDD+TI+IW S C L GH +V
Sbjct: 998 SGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSV 1057
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P V S S D TI++WD G G V S+
Sbjct: 1058 VFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV 1099
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E + V ++F P + S + I++WD T + + H G V + F
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQ 1022
Query: 65 IFVSGG-----KMIVMAYQGCI--LESRN--------EPCLFRIKSVLGDDYKIKVWNYK 109
SG K+ A C LE P R+ S DD+ IK+W+
Sbjct: 1023 RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASG-SDDHTIKIWDAV 1081
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
C TL GH D + + F + + S S D TI+IW S C L GH +V
Sbjct: 1082 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 1141
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P V S S+D TI++WD + G G V S+
Sbjct: 1142 AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSV 1183
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 78/207 (37%), Gaps = 28/207 (13%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E + V ++F + S + I++WD T + + H G V + F +
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896
Query: 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI 124
SG DD IK+W+ C TL GH +
Sbjct: 897 RVASG----------------------------SDDKTIKIWDAASGTCTQTLEGHGGRV 928
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD 184
++ F + + S SDD TI+IW S C L GH V+ F P V S S D
Sbjct: 929 QSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGD 988
Query: 185 QTIRVWDISGLRKKNVAPGMGKLVLSM 211
+TI++WD + G G V S+
Sbjct: 989 KTIKIWDTASGTCTQTLEGHGGSVWSV 1015
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 14/221 (6%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E V ++F P + S + I++WD T + + H G V+ + F
Sbjct: 1005 LEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQ 1064
Query: 65 IFVSGGK----MIVMAYQGC---ILESRNEPCLFRIKSVLGD-------DYKIKVWNYKQ 110
SG I A G LE + S G D IK+W+
Sbjct: 1065 RVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAAS 1124
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
C TL GH ++ + F + + S S D TI+IW S C L GH +V
Sbjct: 1125 GTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVA 1184
Query: 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P V S S D+TI++WD + G G V S+
Sbjct: 1185 FSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSV 1225
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 72/189 (38%), Gaps = 28/189 (14%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
E V ++F P + S +G I++WD T + + H G V + F
Sbjct: 1089 LEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQ 1148
Query: 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI 124
SG D IK+W+ C TL GH ++
Sbjct: 1149 RVASGSI----------------------------DGTIKIWDAASGTCTQTLEGHGGWV 1180
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD 184
++ F + + S S D+TI+IW S C L GH +V F P V S S D
Sbjct: 1181 QSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSD 1240
Query: 185 QTIRVWDIS 193
TI++WD +
Sbjct: 1241 NTIKIWDTA 1249
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 9/162 (5%)
Query: 59 FHNQQPIFVSGGKMIVMAYQGCI--LESRNEPCLFRIKSVLG-------DDYKIKVWNYK 109
F ++P ++S ++ + C LE L S G DD IK+W+
Sbjct: 812 FKKEEPGWISTISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTA 871
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
TL GH + + F + + S SDD+TI+IW S C L GH V
Sbjct: 872 SGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSV 931
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
F P V S S D TI++WD + G G VLS+
Sbjct: 932 AFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSV 973
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSA+ D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D + F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D I+ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H ++ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH + F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WDIS
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDIS 326
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHT 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG----- 70
+F+P+ I+S + +++WD R L+ H PV + F+ + VS
Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 71 KMIVMAYQGCI---LESRNEPCLFRIKSVLGD-------DYKIKVWNYKQRKCIFTLLGH 120
++ A C+ ++ N P F S G D +K+W+Y + KC+ T GH
Sbjct: 223 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 282
Query: 121 LDY---IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+ I F WI+S S+D + IW QS+ + L GH V+C HPT++I
Sbjct: 283 KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENI 342
Query: 178 VVSASL--DQTIRVW 190
+ SA+L D+TI++W
Sbjct: 343 IASAALENDKTIKLW 357
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 102/265 (38%), Gaps = 50/265 (18%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V + F P W+ SS + +I++W + H+ + + + + + VSG
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS- 133
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
DD +KVW K + TL GH +Y+ F+
Sbjct: 134 ---------------------------DDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP 166
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ I+S S D+++RIW ++ C+ L H+ V F+ ++VS+S D R+WD
Sbjct: 167 QSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Query: 192 ISG------LRKKNVAP---------GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236
+ L + P G L ++ + +W Y K C +T H
Sbjct: 227 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK--GKCLKTYTGH-- 282
Query: 237 NRKMEPLCNIHENTRVKSGAWDESG 261
K E C I N V G W SG
Sbjct: 283 --KNEKYC-IFANFSVTGGKWIVSG 304
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 27/150 (18%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ T + + V + F P +IL++ + ++LWDY L+ + H+ I F
Sbjct: 233 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FA 291
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
N V+GGK IV + D + +WN + ++ + L GH
Sbjct: 292 N---FSVTGGKWIVSGSE---------------------DNMVYIWNLQSKEVVQKLQGH 327
Query: 121 LDYIRTTFFHHEYPWILSAS--DDQTIRIW 148
D + T H I SA+ +D+TI++W
Sbjct: 328 TDTVLCTACHPTENIIASAALENDKTIKLW 357
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEV 221
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 28/127 (22%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81
P++LS + I++WD L H+ VRG+ FH SGGK I+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-------SGGKFILSC----- 356
Query: 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 141
DD ++VW+YK ++C+ TL H ++ + FH P++++ S
Sbjct: 357 ----------------ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 142 DQTIRIW 148
DQT+++W
Sbjct: 401 DQTVKVW 407
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLTSCSADMTIKLWDFQGF 182
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
V+G+ FH +ILS + +++WDY+ ++ + HE V + FH P V+G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74
+ F P I S+ + ++LW + F H G VR + F G+ +V
Sbjct: 66 VDFSPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGD-------GQSLV 118
Query: 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 134
A DD IKVW ++K +F+L H++++R F +
Sbjct: 119 TA---------------------SDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGR 157
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
I+SASDD+TI++W SR CI H +V FHP+ + +A+ D T++VWDI
Sbjct: 158 LIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDI 215
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F+ + V+ +SF ++++ + I++W L ++H VR C
Sbjct: 96 TAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVR--C---- 149
Query: 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122
F G++IV A DD IK+W+ R+CI + H
Sbjct: 150 -AKFSPDGRLIVSA---------------------SDDKTIKLWDKTSRECIQSFCEHGG 187
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 182
++ FH I +A+ D T+++W + I H+ V FHP+ + +++AS
Sbjct: 188 FVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITAS 247
Query: 183 LDQTIRVWDI 192
D T++V D+
Sbjct: 248 NDSTLKVLDL 257
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 28/179 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ F P I+S+ + I+LWD ++ F EH G V + FH G
Sbjct: 147 VRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFH-------PSGT 199
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
I A D +KVW+ + K I H + + FH
Sbjct: 200 CIAAA---------------------ATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHP 238
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
++++AS+D T+++ + L GH V C +F D S D+ + VW
Sbjct: 239 SGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGGSDEQVMVW 297
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D + VWN K + + +GH D I + F I SAS D+T+R+W +
Sbjct: 39 DSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTAF 98
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H V F +V+AS D+TI+VW +
Sbjct: 99 KAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTV 131
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D + F+ + S S D + +W +++ GH ++ F P+ ++
Sbjct: 16 GHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLI 75
Query: 179 VSASLDQTIRVW 190
SAS D+T+R+W
Sbjct: 76 ASASRDKTVRLW 87
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ ++ S V LSFHP +++++ ++ +++ D LL H+GPV + F
Sbjct: 220 LIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFS 279
Query: 61 NQQPIFVSGG 70
+ F SGG
Sbjct: 280 REGDFFASGG 289
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+TIRIW ++++ C+
Sbjct: 315 SRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 98/253 (38%), Gaps = 50/253 (19%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++++ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISD 295
Query: 177 --------------IVVSASLDQTIRVWDIS-------------GLRKKNVAPGMGKLVL 209
++S S D+TI++WDIS +R PG GK +L
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPG-GKFIL 354
Query: 210 SMKSKHP--IWKY 220
S IW Y
Sbjct: 355 SCADDKTIRIWDY 367
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + +++AS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+TIRIW ++++ C+
Sbjct: 315 SRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ S+DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q C+ + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 50/253 (19%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++++ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG C+ +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISD 295
Query: 177 --------------IVVSASLDQTIRVWDIS-------------GLRKKNVAPGMGKLVL 209
++S S D+TI++WDIS +R PG GK +L
Sbjct: 296 ATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPG-GKFIL 354
Query: 210 SMKSKHP--IWKY 220
S IW Y
Sbjct: 355 SCADDKTIRIWDY 367
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + +++AS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V + F P ++LSS + I++W+ + F+ H VR + + + S
Sbjct: 194 VSSVCFLPSGDFLLSSSRDKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSN 253
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGD--------------- 99
++ ++ + C E R E C I G
Sbjct: 254 DQTVRIWSLSSKECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASG 313
Query: 100 --DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D IK+W+ C+F+L+GH +++R FH ++ SASDD+TI+IW + + C
Sbjct: 314 SRDRVIKIWDVTTAVCLFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSK 373
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L HNH+V FH + V++ S+D TI+VW+
Sbjct: 374 SLEAHNHFVTTIDFHRSSPFVITGSVDLTIKVWE 407
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +K+W+Y+ TL GH D ++ F + S+S D T++IW +Q+ C
Sbjct: 127 EDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMT 186
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
L GH+H V F P+ D ++S+S D+TI++W+++
Sbjct: 187 LRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVA 221
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++SS + +++WDY + E +RG Q F S GK++ +
Sbjct: 115 FHPVYNVMVSSSEDASMKIWDYESG-------DFERTLRGHTDSVQDLAFDSSGKLLASS 167
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
D +K+W+++ +C TL GH + + F ++
Sbjct: 168 SA---------------------DMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFL 206
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
LS+S D+TI++W + C+ GH +V ++ S S DQT+R+W +S
Sbjct: 207 LSSSRDKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKE 266
Query: 197 KKNVAPGMGKLVLSMK 212
K G +V +K
Sbjct: 267 CKEELRGHEHVVECIK 282
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ L+F + SS + +++WD++ H+ V +CF +S
Sbjct: 152 VQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSR 211
Query: 71 ----KMIVMAYQGCILESRNEPCLFRIKSVLGD---------DYKIKVWNYKQRKCIFTL 117
KM +A C+ R +V D D +++W+ ++C L
Sbjct: 212 DKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEEL 271
Query: 118 LGHLDYIRTTFFHHEY--------------------PWILSASDDQTIRIWYWQSRNCIC 157
GH + + E P++ S S D+ I+IW + C+
Sbjct: 272 RGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLF 331
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
L GH+++V FH + SAS D+TI++W++
Sbjct: 332 SLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWEL 366
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD 175
+L GH I FH Y ++S+S+D +++IW ++S + L GH V F +
Sbjct: 102 SLSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSG 161
Query: 176 DIVVSASLDQTIRVWDI 192
++ S+S D T+++WD
Sbjct: 162 KLLASSSADMTVKIWDF 178
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+GL+FH ++ S+ + I++W+ R + + H V I FH P ++G
Sbjct: 340 VRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFHRSSPFVITGSV 399
Query: 72 MIVMAYQGC 80
+ + C
Sbjct: 400 DLTIKVWEC 408
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74
+ F P I S+ + ++LW + F H G VR + F G+ +V
Sbjct: 66 VDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGD-------GQSLV 118
Query: 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 134
A DD IKVW ++K +F+L H++++R F +
Sbjct: 119 TA---------------------SDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGR 157
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
I+SASDD+TI++W SR CI H +V FHP+ + +A+ D T++VWDI
Sbjct: 158 LIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDI 215
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
T F+ + V+ +SF ++++ + I++W L ++H VR C
Sbjct: 96 TVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVR--C---- 149
Query: 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD 122
F G++IV A DD IK+W+ R+CI + H
Sbjct: 150 -AKFSPDGRLIVSA---------------------SDDKTIKLWDKTSRECIHSFCEHGG 187
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS 182
++ FH I +A+ D T+++W + I H+ V FHP+ + +++AS
Sbjct: 188 FVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITAS 247
Query: 183 LDQTIRVWDI 192
D T++V D+
Sbjct: 248 NDSTLKVLDL 257
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D + +WN K + + +GH D I + F I SAS D+T+R+W + V
Sbjct: 39 DSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTVF 98
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-------------ISGLRKKNVAPGMGK 206
H V F +V+AS D+TI+VW I+ +R +P G+
Sbjct: 99 KAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPD-GR 157
Query: 207 LVLSMKSKHPIWKYCKPVKYC 227
L++S I + K + C
Sbjct: 158 LIVSASDDKTIKLWDKTSREC 178
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 28/137 (20%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V + FHP I ++ + +++WD RMN L++ + H G V + FH SG
Sbjct: 189 VNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFH------PSGNY 242
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
+I + +D +KV + + + ++TL GH + + F
Sbjct: 243 LITAS----------------------NDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSR 280
Query: 132 EYPWILSASDDQTIRIW 148
E + S D+ + +W
Sbjct: 281 EGEFFASGGSDEQVMVW 297
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 28/179 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ F P I+S+ + I+LWD + F EH G V + FH G
Sbjct: 147 VRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIHSFCEHGGFVNFVDFH-------PSGT 199
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
I A D +KVW+ + K I H + + FH
Sbjct: 200 CIAAA---------------------ATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHP 238
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
++++AS+D T+++ + L GH V +F + S D+ + VW
Sbjct: 239 SGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSREGEFFASGGSDEQVMVW 297
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D + T F+ + S S D + IW + + GH ++ F P+ ++
Sbjct: 16 GHRDTVTTVDFNPNTKQLASGSMDSCLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLI 75
Query: 179 VSASLDQTIRVW 190
SAS D+T+R+W
Sbjct: 76 ASASRDKTVRLW 87
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ ++ S V LSFHP +++++ ++ +++ D LL H+GPV + F
Sbjct: 220 LIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFS 279
Query: 61 NQQPIFVSGG 70
+ F SGG
Sbjct: 280 REGEFFASGG 289
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 34/214 (15%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 71 ----KMIVMAYQGCILESRN------------EPCLFRIKSVLGDDYK------------ 102
++ V+A + C E R E I G + K
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 103 -----IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H H+V FH T VV+ +DQT++VW+
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKVWE 408
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP ++S+ + I++WDY H V+ I F + + S + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD------ 176
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISE 295
Query: 177 --------------IVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V + F+ +++ +G ++LWD +L H+ + + FH S
Sbjct: 63 TSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLAS 122
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
G D IK+W+ +++ C+F GH +R
Sbjct: 123 GSV----------------------------DSNIKLWDVRRKGCVFRYKGHTQAVRCLA 154
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
F + W+ SASDD T+++W + I T H V QFHP + ++ S S D+T++
Sbjct: 155 FSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVK 214
Query: 189 VWDI 192
+WD+
Sbjct: 215 LWDL 218
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + G+D ++ +W + CI +L GH + F+ +++ S ++R+W +
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + + S S+D I++WD+
Sbjct: 94 AAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 29/181 (16%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + L FHP ++ S + I+LWD R + ++ H VR + F
Sbjct: 106 ASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPD------- 158
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
GK + A DD +K+W+ K I H + F
Sbjct: 159 GKWLASA---------------------SDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF 197
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
H + S S D+T+++W + N I G V F+P + S S + T+RV
Sbjct: 198 HPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRV 256
Query: 190 W 190
+
Sbjct: 257 Y 257
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/194 (18%), Positives = 80/194 (41%), Gaps = 31/194 (15%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+++ + V+ L+F P W+ S+ + ++LWD ++ +F H V + FH +
Sbjct: 142 RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE 201
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
+ SG D +K+W+ ++ I + G
Sbjct: 202 YLLASGSA----------------------------DRTVKLWDLEKFNMIGSSEGETGV 233
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+R+ F+ + + S S++ T+R++ W+ C V+ H + + +++ +++ S
Sbjct: 234 VRSVLFNPDGSCLYSGSEN-TLRVYGWEPDRCFDVV--HVGWGKVSDLAISNNQMIAVSY 290
Query: 184 DQTIRVWDISGLRK 197
T W + L +
Sbjct: 291 SHTNVSWYVVDLNR 304
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
+ + +D + IW NCI LTGH V C QF+ +++ VV+ SL ++R+WD+
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA 95
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKY 220
+ G K +S HP+ +Y
Sbjct: 96 KILRTLMGH-KASISSLDFHPMGEY 119
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+T+F + ++ V + FHP + S + ++LWD ++ + G VR + F+
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN 240
Query: 61 NQQPIFVSGGKMIVMAY 77
SG + + Y
Sbjct: 241 PDGSCLYSGSENTLRVY 257
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83
I SS ++ +++W + EHE V I + + ++ G +
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPES------AHPTILEATGSETK 302
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
+P F + D IK+W+ C+ TL+GH +++R H +I+S +DD+
Sbjct: 303 KSGKPGPFLLSG--SRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDK 360
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
T+RIW ++++ C L+ H H+V FH T VV+ S+DQT++VW+
Sbjct: 361 TLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+++ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+Q CI + GH+H V P D +VSAS D+TI++W+++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP I+S+ + I++WD+ H V+ I F + + S + +
Sbjct: 116 FHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 77 ---YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF-----HPT--- 174
++R + + I S+S+DQT+R+W ++ C L H H V C + HPT
Sbjct: 236 WVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILE 295
Query: 175 ------------DDIVVSASLDQTIRVWDIS 193
++S S D+TI++WD+S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81
P++LS + I++WD + L H+ VRG+ H GGK IV
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVH-------PGGKYIVSC----- 356
Query: 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 141
DD +++W+YK ++C TL H ++ + FH P++++ S
Sbjct: 357 ----------------ADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 142 DQTIRIW 148
DQT+++W
Sbjct: 401 DQTVKVW 407
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + I+SAS+D TI++W ++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 175 DDIVVSASLDQTIRVWDISGL 195
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQGF 182
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 48/205 (23%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V ++ P I+S+ + I++W+ ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVR---------------- 238
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
M+ G ++ S + +D ++VW ++C L H + +
Sbjct: 239 MVRPNQDGTLIASSS------------NDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Query: 132 EY--------------------PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
E P++LS S D+TI++W C+ L GH+++V
Sbjct: 287 ESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLV 346
Query: 172 HPTDDIVVSASLDQTIRVWDISGLR 196
HP +VS + D+T+R+WD R
Sbjct: 347 HPGGKYIVSCADDKTLRIWDYKNKR 371
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
V+G+ HP +I+S + +++WDY+ + HE V + FH P V+G
Sbjct: 341 VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTG 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,337,179
Number of Sequences: 539616
Number of extensions: 10032692
Number of successful extensions: 34442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 468
Number of HSP's that attempted gapping in prelim test: 24934
Number of HSP's gapped (non-prelim): 6734
length of query: 641
length of database: 191,569,459
effective HSP length: 124
effective length of query: 517
effective length of database: 124,657,075
effective search space: 64447707775
effective search space used: 64447707775
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)