Query psy9327
Match_columns 641
No_of_seqs 644 out of 3217
Neff 8.5
Searched_HMMs 29240
Date Sat Aug 17 00:31:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9327.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9327hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 7.3E-37 2.5E-41 330.6 35.3 284 3-314 102-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 2.1E-36 7.3E-41 313.1 33.8 285 1-316 5-302 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 3.1E-35 1.1E-39 309.3 37.3 278 3-313 49-340 (340)
4 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-38 1.4E-42 368.1 16.3 288 1-318 5-304 (814)
5 3frx_A Guanine nucleotide-bind 100.0 6.9E-35 2.4E-39 304.0 37.2 282 2-317 10-318 (319)
6 3ow8_A WD repeat-containing pr 100.0 2.5E-34 8.6E-39 300.4 35.8 281 2-314 25-319 (321)
7 2pbi_B Guanine nucleotide-bind 100.0 4.6E-34 1.6E-38 302.5 35.1 280 2-313 57-354 (354)
8 3iz6_a 40S ribosomal protein R 100.0 1.3E-34 4.3E-39 309.6 30.9 277 2-280 59-375 (380)
9 2hes_X YDR267CP; beta-propelle 100.0 6.8E-34 2.3E-38 297.9 34.5 282 2-316 7-328 (330)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-34 1.8E-38 300.6 33.9 286 2-319 8-338 (345)
11 4ery_A WD repeat-containing pr 100.0 2.1E-33 7E-38 290.6 37.1 282 2-315 16-311 (312)
12 1nr0_A Actin interacting prote 100.0 2.1E-33 7.2E-38 319.2 39.8 311 2-318 52-399 (611)
13 1vyh_C Platelet-activating fac 100.0 6.8E-34 2.3E-38 307.3 33.6 245 2-278 143-409 (410)
14 1nr0_A Actin interacting prote 100.0 3.3E-33 1.1E-37 317.6 37.0 288 3-318 141-569 (611)
15 2xzm_R RACK1; ribosome, transl 100.0 7.6E-33 2.6E-37 291.3 36.9 281 2-317 14-341 (343)
16 3ow8_A WD repeat-containing pr 100.0 1.7E-33 5.7E-38 294.1 31.6 243 3-277 74-318 (321)
17 3mkr_B Coatomer subunit alpha; 100.0 9.3E-36 3.2E-40 299.0 12.1 165 425-589 29-197 (320)
18 4gqb_B Methylosome protein 50; 100.0 4.4E-33 1.5E-37 294.1 32.8 279 6-317 27-332 (344)
19 3mv2_A Coatomer subunit alpha; 100.0 1.1E-35 3.7E-40 298.1 10.9 162 425-589 41-206 (325)
20 4gqb_B Methylosome protein 50; 100.0 7.5E-33 2.6E-37 292.3 32.3 244 7-282 80-333 (344)
21 4g56_B MGC81050 protein; prote 100.0 9.8E-33 3.4E-37 292.7 32.6 279 6-316 39-343 (357)
22 1erj_A Transcriptional repress 100.0 7.8E-32 2.7E-36 289.2 38.4 276 7-316 62-389 (393)
23 2pm7_B Protein transport prote 100.0 1.3E-32 4.6E-37 283.6 29.9 250 1-279 1-284 (297)
24 1got_B GT-beta; complex (GTP-b 100.0 5.7E-32 1.9E-36 284.4 33.5 243 2-277 90-340 (340)
25 3zwl_B Eukaryotic translation 100.0 1.7E-31 5.8E-36 280.2 35.0 290 3-325 26-355 (369)
26 3dm0_A Maltose-binding peripla 100.0 1.3E-31 4.5E-36 308.8 36.7 280 3-315 376-692 (694)
27 2ynn_A Coatomer subunit beta'; 100.0 1.5E-31 5.1E-36 276.7 32.5 245 2-278 48-301 (304)
28 3frx_A Guanine nucleotide-bind 100.0 1.4E-31 4.7E-36 279.0 32.2 243 2-279 58-316 (319)
29 1gxr_A ESG1, transducin-like e 100.0 1E-30 3.5E-35 271.0 37.6 276 5-314 47-335 (337)
30 2hes_X YDR267CP; beta-propelle 100.0 1.8E-31 6.2E-36 279.4 31.1 239 8-279 57-327 (330)
31 2ymu_A WD-40 repeat protein; u 100.0 5.5E-31 1.9E-35 295.4 37.1 281 3-318 10-336 (577)
32 4aow_A Guanine nucleotide-bind 100.0 1.6E-30 5.3E-35 270.6 36.8 282 3-317 32-338 (340)
33 3k26_A Polycomb protein EED; W 100.0 2.2E-31 7.7E-36 279.3 30.5 278 4-315 13-365 (366)
34 4ery_A WD repeat-containing pr 100.0 5.6E-31 1.9E-35 272.3 33.0 247 2-279 58-311 (312)
35 2xzm_R RACK1; ribosome, transl 100.0 3.6E-31 1.2E-35 278.5 31.7 242 3-280 70-340 (343)
36 3dwl_C Actin-related protein 2 100.0 3.4E-32 1.2E-36 288.5 23.4 241 4-277 6-279 (377)
37 2pbi_B Guanine nucleotide-bind 100.0 7.4E-31 2.5E-35 277.8 33.6 243 3-277 100-354 (354)
38 1k8k_C P40, ARP2/3 complex 41 100.0 4.1E-31 1.4E-35 278.5 30.9 282 4-318 3-363 (372)
39 4g56_B MGC81050 protein; prote 100.0 2.6E-31 8.7E-36 281.8 28.9 243 4-278 89-341 (357)
40 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-31 1.7E-35 277.8 30.4 249 5-281 57-336 (345)
41 2ymu_A WD-40 repeat protein; u 100.0 1.6E-30 5.6E-35 291.5 36.4 276 2-313 296-577 (577)
42 3bg1_A Protein SEC13 homolog; 100.0 8.8E-32 3E-36 280.1 21.9 247 4-279 8-292 (316)
43 1sq9_A Antiviral protein SKI8; 100.0 1.1E-30 3.7E-35 278.4 30.5 281 2-317 9-396 (397)
44 3gre_A Serine/threonine-protei 100.0 1.4E-30 4.9E-35 282.1 31.0 251 2-282 55-361 (437)
45 1erj_A Transcriptional repress 100.0 3.8E-30 1.3E-34 276.1 33.5 235 11-278 125-387 (393)
46 3odt_A Protein DOA1; ubiquitin 100.0 9.9E-30 3.4E-34 261.0 35.0 281 2-324 11-304 (313)
47 3vl1_A 26S proteasome regulato 100.0 1.6E-30 5.4E-35 279.5 30.2 277 11-316 58-365 (420)
48 3ei3_B DNA damage-binding prot 100.0 4.5E-30 1.5E-34 273.2 32.9 278 2-316 66-382 (383)
49 3jrp_A Fusion protein of prote 100.0 3.4E-30 1.2E-34 271.6 29.4 250 1-279 3-286 (379)
50 3v7d_B Cell division control p 100.0 3.1E-29 1E-33 273.8 36.8 276 2-315 155-462 (464)
51 3mkq_A Coatomer beta'-subunit; 100.0 5.2E-29 1.8E-33 291.0 40.7 202 2-203 48-268 (814)
52 4a11_B DNA excision repair pro 100.0 1.7E-29 5.8E-34 269.0 32.8 313 3-315 37-404 (408)
53 3sfz_A APAF-1, apoptotic pepti 100.0 1E-29 3.6E-34 311.1 35.5 246 4-277 610-910 (1249)
54 4aez_A CDC20, WD repeat-contai 100.0 2.2E-29 7.4E-34 270.5 33.5 282 6-322 88-386 (401)
55 1r5m_A SIR4-interacting protei 100.0 1.3E-29 4.5E-34 271.1 30.3 274 7-315 106-424 (425)
56 1pgu_A Actin interacting prote 100.0 2.4E-28 8.1E-33 275.2 40.9 200 2-202 56-291 (615)
57 2pm9_A Protein WEB1, protein t 100.0 3.9E-30 1.3E-34 275.6 24.8 280 7-317 65-415 (416)
58 3i2n_A WD repeat-containing pr 100.0 1.2E-29 4E-34 265.6 27.5 285 3-317 12-354 (357)
59 4e54_B DNA damage-binding prot 100.0 1.4E-29 4.7E-34 275.4 28.8 282 3-318 113-432 (435)
60 3dm0_A Maltose-binding peripla 100.0 2.5E-29 8.4E-34 289.8 32.3 242 3-278 424-691 (694)
61 3dw8_B Serine/threonine-protei 100.0 1.4E-29 4.6E-34 274.3 28.3 244 8-285 27-378 (447)
62 3v7d_B Cell division control p 100.0 1.6E-28 5.6E-33 268.0 36.9 279 3-321 115-426 (464)
63 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-29 8.5E-34 260.4 28.1 209 2-238 4-247 (351)
64 3vl1_A 26S proteasome regulato 100.0 7.4E-29 2.5E-33 266.5 32.2 279 5-316 94-419 (420)
65 1r5m_A SIR4-interacting protei 100.0 6.8E-29 2.3E-33 265.5 30.6 277 6-317 42-362 (425)
66 1gxr_A ESG1, transducin-like e 100.0 4E-28 1.4E-32 251.4 34.8 237 7-277 95-334 (337)
67 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-28 3.2E-32 261.1 37.1 276 2-320 111-395 (445)
68 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-28 4.1E-33 267.7 29.3 270 6-319 130-417 (435)
69 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.3E-28 2.8E-32 261.6 35.2 272 2-317 152-443 (445)
70 3k26_A Polycomb protein EED; W 100.0 7E-29 2.4E-33 260.2 25.2 239 8-278 68-364 (366)
71 4aow_A Guanine nucleotide-bind 100.0 6E-28 2.1E-32 251.0 31.7 247 2-282 79-339 (340)
72 1sq9_A Antiviral protein SKI8; 100.0 9.9E-29 3.4E-33 263.2 25.7 247 2-281 55-396 (397)
73 2pm9_A Protein WEB1, protein t 100.0 3.8E-29 1.3E-33 267.9 22.2 280 8-319 11-340 (416)
74 1pgu_A Actin interacting prote 100.0 7.5E-28 2.6E-32 271.1 33.6 279 6-320 15-332 (615)
75 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-28 9.2E-33 261.8 27.5 248 3-283 75-345 (402)
76 3ei3_B DNA damage-binding prot 100.0 4.9E-28 1.7E-32 257.5 28.8 241 6-279 115-381 (383)
77 2j04_B YDR362CP, TAU91; beta p 100.0 7.6E-29 2.6E-33 275.9 23.2 280 4-317 202-518 (524)
78 3jro_A Fusion protein of prote 100.0 1.2E-28 4.2E-33 286.8 25.9 251 1-280 1-285 (753)
79 3zwl_B Eukaryotic translation 100.0 1.4E-27 4.8E-32 250.3 30.9 246 2-281 67-347 (369)
80 1k8k_C P40, ARP2/3 complex 41 100.0 8.7E-28 3E-32 253.0 29.5 246 2-280 45-361 (372)
81 1yfq_A Cell cycle arrest prote 100.0 7.6E-28 2.6E-32 250.7 28.6 268 4-308 6-315 (342)
82 4e54_B DNA damage-binding prot 100.0 9.4E-29 3.2E-33 268.8 22.1 251 3-283 158-433 (435)
83 4gga_A P55CDC, cell division c 100.0 3.8E-27 1.3E-31 254.8 34.4 274 12-318 108-397 (420)
84 3dwl_C Actin-related protein 2 100.0 1.1E-28 3.7E-33 261.5 21.5 202 2-237 48-278 (377)
85 4ggc_A P55CDC, cell division c 100.0 9.9E-27 3.4E-31 239.4 35.0 272 12-316 28-315 (318)
86 3sfz_A APAF-1, apoptotic pepti 100.0 2.6E-27 8.8E-32 289.9 35.6 290 2-319 650-1077(1249)
87 2aq5_A Coronin-1A; WD40 repeat 100.0 9.4E-28 3.2E-32 257.5 27.7 274 11-318 36-344 (402)
88 4aez_A CDC20, WD repeat-contai 100.0 4.1E-27 1.4E-31 252.7 32.5 241 8-283 133-383 (401)
89 3mmy_A MRNA export factor; mRN 100.0 2.4E-27 8.3E-32 248.4 29.1 278 2-313 32-343 (368)
90 4gga_A P55CDC, cell division c 100.0 6E-27 2E-31 253.2 31.5 244 4-280 142-395 (420)
91 3i2n_A WD repeat-containing pr 100.0 1.7E-27 5.9E-32 249.0 25.5 243 6-280 62-353 (357)
92 3gre_A Serine/threonine-protei 100.0 2.1E-27 7.2E-32 257.2 26.7 274 7-313 109-437 (437)
93 2xyi_A Probable histone-bindin 100.0 2.5E-27 8.7E-32 257.2 27.3 248 3-281 122-411 (430)
94 3dw8_B Serine/threonine-protei 100.0 5.7E-27 1.9E-31 253.7 26.9 244 2-275 74-442 (447)
95 3odt_A Protein DOA1; ubiquitin 100.0 4.4E-26 1.5E-30 233.7 31.9 240 2-282 52-298 (313)
96 3iz6_a 40S ribosomal protein R 100.0 1E-27 3.5E-32 255.9 20.2 258 31-319 46-332 (380)
97 4gq1_A NUP37; propeller, trans 100.0 3.7E-27 1.2E-31 253.0 24.5 238 10-275 90-385 (393)
98 2pm7_B Protein transport prote 100.0 1.8E-26 6.3E-31 237.5 28.5 244 44-316 2-285 (297)
99 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-27 3.9E-32 266.4 20.5 239 3-279 260-516 (524)
100 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-26 7.2E-31 250.0 28.2 237 2-282 166-416 (435)
101 2oaj_A Protein SNI1; WD40 repe 99.9 9.4E-26 3.2E-30 267.1 35.4 183 7-192 56-310 (902)
102 3bg1_A Protein SEC13 homolog; 99.9 2.5E-26 8.5E-31 238.8 26.0 242 47-316 9-293 (316)
103 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.6E-25 5.3E-30 244.3 32.1 275 9-317 4-392 (450)
104 4h5i_A Guanine nucleotide-exch 99.9 4.1E-26 1.4E-30 242.5 26.5 198 7-278 131-341 (365)
105 4ggc_A P55CDC, cell division c 99.9 4E-25 1.4E-29 227.4 31.7 244 4-280 62-315 (318)
106 3lrv_A PRE-mRNA-splicing facto 99.9 2.8E-26 9.5E-31 240.9 22.1 263 17-318 44-335 (343)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.9E-25 6.6E-30 243.6 28.9 234 6-268 99-373 (450)
108 3jrp_A Fusion protein of prote 99.9 3.1E-25 1.1E-29 233.6 29.2 248 41-316 1-287 (379)
109 2oaj_A Protein SNI1; WD40 repe 99.9 1.5E-25 5.2E-30 265.3 29.7 281 5-317 13-384 (902)
110 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-25 4.7E-30 237.3 26.3 242 3-318 13-338 (355)
111 4h5i_A Guanine nucleotide-exch 99.9 2.9E-25 1E-29 235.9 26.3 283 10-317 15-344 (365)
112 2j04_A TAU60, YPL007P, hypothe 99.9 2.3E-25 7.9E-30 244.1 25.0 250 7-279 13-296 (588)
113 3f3f_A Nucleoporin SEH1; struc 99.9 1.8E-24 6.3E-29 223.6 29.6 244 46-318 6-339 (351)
114 2j04_A TAU60, YPL007P, hypothe 99.9 2.4E-25 8.2E-30 244.0 23.4 223 7-268 83-349 (588)
115 3bws_A Protein LP49; two-domai 99.9 4.9E-24 1.7E-28 230.0 32.0 274 10-316 123-432 (433)
116 1yfq_A Cell cycle arrest prote 99.9 6.3E-25 2.2E-29 228.5 23.4 231 3-272 50-315 (342)
117 2w18_A PALB2, fancn, partner a 99.9 6.3E-25 2.2E-29 227.0 23.0 218 10-277 112-354 (356)
118 4a11_B DNA excision repair pro 99.9 1.1E-24 3.7E-29 231.7 25.5 258 30-319 22-368 (408)
119 3lrv_A PRE-mRNA-splicing facto 99.9 7.9E-25 2.7E-29 229.8 23.5 234 10-282 77-335 (343)
120 1l0q_A Surface layer protein; 99.9 1.1E-22 3.8E-27 216.3 36.4 245 3-283 26-278 (391)
121 2w18_A PALB2, fancn, partner a 99.9 2.3E-24 8E-29 222.7 20.7 172 3-192 172-355 (356)
122 2xyi_A Probable histone-bindin 99.9 1.1E-23 3.7E-28 228.6 25.2 207 2-239 174-409 (430)
123 1l0q_A Surface layer protein; 99.9 2.2E-22 7.5E-27 214.0 33.9 264 22-320 3-279 (391)
124 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-22 3.9E-27 214.9 29.3 240 10-277 59-333 (355)
125 3mmy_A MRNA export factor; mRN 99.9 8.7E-23 3E-27 213.6 27.7 249 36-320 24-308 (368)
126 3jro_A Fusion protein of prote 99.9 2.4E-23 8.3E-28 242.2 24.4 245 44-316 2-285 (753)
127 3bws_A Protein LP49; two-domai 99.9 2.6E-22 8.8E-27 216.5 30.2 246 4-279 164-431 (433)
128 4gq1_A NUP37; propeller, trans 99.9 1.4E-22 4.6E-27 217.4 17.7 182 3-212 130-366 (393)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-19 4.6E-24 195.6 28.4 247 4-286 112-393 (415)
130 1nir_A Nitrite reductase; hemo 99.8 3.7E-19 1.3E-23 198.9 28.8 285 2-320 172-518 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 9.5E-19 3.3E-23 189.0 28.5 223 2-261 171-409 (415)
132 2ecf_A Dipeptidyl peptidase IV 99.8 7.9E-19 2.7E-23 203.0 28.1 275 9-316 36-413 (741)
133 2oit_A Nucleoporin 214KDA; NH2 99.8 1.8E-19 6.3E-24 195.8 19.4 164 8-201 35-229 (434)
134 3u4y_A Uncharacterized protein 99.8 7.4E-18 2.5E-22 174.6 30.7 271 15-318 3-306 (331)
135 3vgz_A Uncharacterized protein 99.8 1.8E-17 6.2E-22 172.7 31.5 242 9-284 40-307 (353)
136 1ri6_A Putative isomerase YBHE 99.8 1.1E-17 3.7E-22 173.4 26.5 246 7-284 35-314 (343)
137 2oit_A Nucleoporin 214KDA; NH2 99.8 9.8E-19 3.4E-23 190.1 19.0 159 8-195 91-279 (434)
138 1xfd_A DIP, dipeptidyl aminope 99.8 1.2E-18 4E-23 200.9 20.4 285 10-317 17-394 (723)
139 2ojh_A Uncharacterized protein 99.8 4.9E-18 1.7E-22 171.3 22.2 234 3-269 35-291 (297)
140 1nir_A Nitrite reductase; hemo 99.8 2.1E-17 7.1E-22 184.7 28.9 268 16-318 144-460 (543)
141 3vgz_A Uncharacterized protein 99.8 4.8E-17 1.6E-21 169.6 28.7 228 10-268 89-332 (353)
142 3u4y_A Uncharacterized protein 99.8 1E-16 3.4E-21 166.0 30.1 249 4-286 35-310 (331)
143 1pby_B Quinohemoprotein amine 99.8 1.4E-16 4.7E-21 164.5 26.8 260 22-320 2-314 (337)
144 3o4h_A Acylamino-acid-releasin 99.8 5.6E-17 1.9E-21 182.5 25.3 266 9-286 21-320 (582)
145 2z3z_A Dipeptidyl aminopeptida 99.8 7.5E-17 2.6E-21 185.5 26.3 275 10-318 82-437 (706)
146 1ri6_A Putative isomerase YBHE 99.7 1.9E-16 6.3E-21 164.0 25.6 261 23-316 7-308 (343)
147 3hfq_A Uncharacterized protein 99.7 2.4E-16 8.1E-21 164.8 25.3 247 7-286 37-325 (347)
148 1jmx_B Amine dehydrogenase; ox 99.7 1.1E-16 3.9E-21 166.2 22.1 158 14-202 4-183 (349)
149 2ecf_A Dipeptidyl peptidase IV 99.7 1.1E-16 3.8E-21 185.0 24.2 275 3-286 145-465 (741)
150 2z3z_A Dipeptidyl aminopeptida 99.7 3.1E-16 1.1E-20 180.3 27.2 278 4-284 115-439 (706)
151 1xfd_A DIP, dipeptidyl aminope 99.7 8.3E-17 2.8E-21 185.4 21.4 244 4-277 52-390 (723)
152 2ojh_A Uncharacterized protein 99.7 1.9E-16 6.4E-21 159.6 21.1 221 26-283 17-261 (297)
153 1k32_A Tricorn protease; prote 99.7 4.1E-16 1.4E-20 187.7 27.5 297 8-342 294-676 (1045)
154 1z68_A Fibroblast activation p 99.7 3.9E-16 1.3E-20 179.9 21.5 278 14-316 20-391 (719)
155 1k32_A Tricorn protease; prote 99.7 1.4E-15 4.7E-20 183.1 26.4 161 4-195 331-503 (1045)
156 1pby_B Quinohemoprotein amine 99.7 1.4E-15 4.9E-20 156.9 21.4 244 11-282 35-312 (337)
157 3pe7_A Oligogalacturonate lyas 99.7 6.9E-15 2.4E-19 155.7 26.0 280 3-316 24-382 (388)
158 3scy_A Hypothetical bacterial 99.7 2.1E-14 7E-19 151.0 29.0 247 8-286 48-345 (361)
159 4a5s_A Dipeptidyl peptidase 4 99.7 1.8E-14 6.1E-19 167.0 27.8 282 10-315 17-397 (740)
160 3fvz_A Peptidyl-glycine alpha- 99.6 1.2E-13 4.1E-18 143.8 30.6 239 9-277 23-319 (329)
161 1q7f_A NHL, brain tumor CG1071 99.6 2.3E-13 7.8E-18 138.0 31.5 237 7-316 27-280 (286)
162 3hfq_A Uncharacterized protein 99.6 8.5E-14 2.9E-18 145.3 26.6 258 30-316 15-317 (347)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 5.3E-14 1.8E-18 148.7 25.1 257 10-317 40-342 (365)
164 1z68_A Fibroblast activation p 99.6 1.8E-14 6E-19 166.1 20.9 227 11-270 61-376 (719)
165 3e5z_A Putative gluconolactona 99.6 6.4E-13 2.2E-17 135.7 26.3 232 3-274 21-281 (296)
166 3c5m_A Oligogalacturonate lyas 99.6 1.2E-13 4E-18 146.1 20.0 271 12-316 38-382 (396)
167 1jmx_B Amine dehydrogenase; ox 99.5 8.4E-13 2.9E-17 136.8 22.8 227 56-320 4-329 (349)
168 3pe7_A Oligogalacturonate lyas 99.5 1.4E-12 4.8E-17 137.8 23.8 250 6-269 77-370 (388)
169 1jof_A Carboxy-CIS,CIS-muconat 99.5 4.6E-13 1.6E-17 141.4 19.4 204 12-283 85-344 (365)
170 3azo_A Aminopeptidase; POP fam 99.5 4.3E-13 1.5E-17 152.9 20.6 238 4-315 18-322 (662)
171 3azo_A Aminopeptidase; POP fam 99.5 1.8E-12 6E-17 147.8 25.1 246 4-286 62-375 (662)
172 2dg1_A DRP35, lactonase; beta 99.5 1.1E-11 3.6E-16 128.5 28.6 230 4-269 39-299 (333)
173 4a5s_A Dipeptidyl peptidase 4 99.5 5E-12 1.7E-16 146.4 27.9 238 13-282 65-402 (740)
174 3scy_A Hypothetical bacterial 99.5 2.1E-12 7.2E-17 135.5 22.0 160 10-197 155-342 (361)
175 2z2n_A Virginiamycin B lyase; 99.5 4.2E-10 1.4E-14 113.7 37.3 270 5-316 10-295 (299)
176 3o4h_A Acylamino-acid-releasin 99.5 5E-13 1.7E-17 150.1 17.1 153 12-199 112-279 (582)
177 2gop_A Trilobed protease; beta 99.5 2.5E-11 8.5E-16 126.2 28.6 255 10-315 15-330 (347)
178 1q7f_A NHL, brain tumor CG1071 99.4 2.8E-11 9.7E-16 122.5 26.6 197 7-278 74-278 (286)
179 2dg1_A DRP35, lactonase; beta 99.4 1.8E-11 6.1E-16 126.8 24.9 242 9-287 5-270 (333)
180 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-11 5.5E-16 141.4 26.2 257 8-282 123-416 (710)
181 2bkl_A Prolyl endopeptidase; m 99.4 5E-12 1.7E-16 145.4 21.8 243 7-286 118-403 (695)
182 2oiz_A Aromatic amine dehydrog 99.4 8.3E-12 2.9E-16 131.9 21.2 243 4-281 46-335 (361)
183 2gop_A Trilobed protease; beta 99.4 1.6E-11 5.4E-16 127.7 22.9 240 10-270 59-320 (347)
184 1rwi_B Serine/threonine-protei 99.4 5.8E-11 2E-15 118.7 25.0 233 11-279 25-263 (270)
185 2oiz_A Aromatic amine dehydrog 99.4 5.9E-11 2E-15 125.3 26.1 272 20-317 14-335 (361)
186 3c5m_A Oligogalacturonate lyas 99.4 3.5E-12 1.2E-16 134.7 15.7 239 14-269 85-370 (396)
187 1xip_A Nucleoporin NUP159; bet 99.4 1.2E-11 4.3E-16 130.9 18.4 152 10-202 38-201 (388)
188 3no2_A Uncharacterized protein 99.4 1.3E-10 4.4E-15 118.0 24.8 210 20-267 4-230 (276)
189 1yr2_A Prolyl oligopeptidase; 99.4 4.3E-11 1.5E-15 138.6 23.7 257 8-286 161-447 (741)
190 3fvz_A Peptidyl-glycine alpha- 99.3 3.9E-11 1.3E-15 124.7 19.3 158 7-194 140-322 (329)
191 2qc5_A Streptogramin B lactona 99.3 1.3E-08 4.5E-13 102.7 35.8 241 7-286 17-265 (300)
192 1qks_A Cytochrome CD1 nitrite 99.3 4.3E-09 1.5E-13 117.5 33.1 237 11-281 198-478 (567)
193 3dsm_A Uncharacterized protein 99.3 2.1E-09 7.2E-14 111.7 27.9 237 10-286 44-308 (328)
194 2xdw_A Prolyl endopeptidase; a 99.2 9.9E-10 3.4E-14 126.5 27.1 241 19-289 81-378 (710)
195 3dr2_A Exported gluconolactona 99.2 2.4E-09 8.1E-14 109.8 26.7 232 3-275 38-302 (305)
196 2bkl_A Prolyl endopeptidase; m 99.2 2.3E-10 7.8E-15 131.5 21.1 270 17-318 75-399 (695)
197 3no2_A Uncharacterized protein 99.2 4.3E-09 1.5E-13 106.6 27.3 178 99-283 13-198 (276)
198 3dsm_A Uncharacterized protein 99.2 2.5E-09 8.7E-14 111.0 26.0 248 29-315 15-301 (328)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 5.9E-09 2E-13 106.3 26.9 236 5-279 13-298 (314)
200 2z2n_A Virginiamycin B lyase; 99.2 3.6E-08 1.2E-12 99.4 31.2 230 8-279 55-294 (299)
201 1qks_A Cytochrome CD1 nitrite 99.2 9.6E-09 3.3E-13 114.7 28.5 225 19-316 165-421 (567)
202 3sjl_D Methylamine dehydrogena 99.2 8.1E-09 2.8E-13 109.0 26.2 283 15-320 38-367 (386)
203 1xip_A Nucleoporin NUP159; bet 99.1 5.9E-10 2E-14 118.1 16.8 134 7-180 86-230 (388)
204 3e5z_A Putative gluconolactona 99.1 2.6E-09 8.9E-14 108.6 20.8 184 3-202 62-253 (296)
205 3hrp_A Uncharacterized protein 99.1 1.5E-08 5.2E-13 108.7 27.6 215 10-285 131-359 (409)
206 2mad_H Methylamine dehydrogena 99.1 7.9E-08 2.7E-12 101.7 32.0 275 16-320 27-354 (373)
207 3iuj_A Prolyl endopeptidase; h 99.1 3.7E-09 1.3E-13 121.4 22.1 257 7-286 126-411 (693)
208 1rwi_B Serine/threonine-protei 99.1 2.7E-09 9.1E-14 106.5 18.2 159 10-196 108-266 (270)
209 2qc5_A Streptogramin B lactona 99.1 1.8E-07 6E-12 94.2 30.9 228 8-276 60-296 (300)
210 1yr2_A Prolyl oligopeptidase; 99.1 6.3E-09 2.2E-13 120.4 22.3 269 18-318 115-443 (741)
211 3g4e_A Regucalcin; six bladed 99.0 4.8E-08 1.6E-12 99.7 25.2 225 7-269 10-261 (297)
212 2mad_H Methylamine dehydrogena 99.0 1.4E-07 4.8E-12 99.8 29.2 238 14-283 70-353 (373)
213 2ghs_A AGR_C_1268P; regucalcin 99.0 2.1E-07 7.1E-12 96.4 27.4 217 11-268 50-290 (326)
214 2qe8_A Uncharacterized protein 99.0 1.4E-07 4.7E-12 98.5 25.4 227 10-270 17-311 (343)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 3.1E-08 1E-12 101.0 18.9 156 10-194 117-299 (314)
216 2hz6_A Endoplasmic reticulum t 98.9 2.8E-10 9.5E-15 120.5 3.0 204 20-261 8-215 (369)
217 3c75_H MADH, methylamine dehyd 98.9 2E-07 6.9E-12 99.9 24.9 273 19-320 82-406 (426)
218 3sjl_D Methylamine dehydrogena 98.9 2.1E-07 7.2E-12 98.1 24.5 245 14-288 82-372 (386)
219 3hrp_A Uncharacterized protein 98.8 3.3E-07 1.1E-11 98.2 23.5 152 15-196 176-356 (409)
220 3c75_H MADH, methylamine dehyd 98.8 4.4E-07 1.5E-11 97.2 21.9 240 14-283 122-405 (426)
221 3g4e_A Regucalcin; six bladed 98.8 3E-07 1E-11 93.7 19.6 147 10-183 98-261 (297)
222 3mkq_B Coatomer subunit alpha; 98.7 2.4E-08 8.2E-13 92.6 7.7 73 345-418 104-176 (177)
223 3q7m_A Lipoprotein YFGL, BAMB; 98.7 5.5E-06 1.9E-10 86.9 26.8 265 20-322 52-343 (376)
224 3iuj_A Prolyl endopeptidase; h 98.7 5E-07 1.7E-11 103.6 19.9 208 50-289 127-368 (693)
225 3hxj_A Pyrrolo-quinoline quino 98.7 8E-07 2.7E-11 91.0 19.4 206 98-316 114-324 (330)
226 1yiq_A Quinohemoprotein alcoho 98.7 1.5E-06 5.1E-11 99.5 22.7 274 21-325 70-514 (689)
227 1kb0_A Quinohemoprotein alcoho 98.6 2.3E-06 7.9E-11 97.7 22.9 273 21-326 77-517 (677)
228 2qe8_A Uncharacterized protein 98.6 4.1E-07 1.4E-11 94.8 15.3 163 7-196 64-280 (343)
229 2ghs_A AGR_C_1268P; regucalcin 98.6 2.9E-06 1E-10 87.7 21.5 145 10-183 134-291 (326)
230 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.1E-05 3.6E-10 84.7 25.6 252 20-313 102-375 (376)
231 3nol_A Glutamine cyclotransfer 98.6 3.3E-06 1.1E-10 83.7 19.6 165 2-202 34-209 (262)
232 1npe_A Nidogen, entactin; glyc 98.6 6.7E-05 2.3E-09 74.6 29.4 146 21-194 1-155 (267)
233 2iwa_A Glutamine cyclotransfer 98.6 7.8E-06 2.7E-10 81.7 22.1 160 11-202 22-189 (266)
234 2ece_A 462AA long hypothetical 98.5 1.7E-05 5.7E-10 84.6 25.2 154 19-195 93-290 (462)
235 1npe_A Nidogen, entactin; glyc 98.5 5.1E-05 1.8E-09 75.5 27.3 162 10-198 36-202 (267)
236 1mda_H Methylamine dehydrogena 98.5 1.6E-06 5.4E-11 91.3 16.3 198 3-203 60-355 (368)
237 3hxj_A Pyrrolo-quinoline quino 98.5 5E-06 1.7E-10 85.0 18.9 167 97-276 153-320 (330)
238 3nok_A Glutaminyl cyclase; bet 98.5 7.4E-06 2.5E-10 81.2 18.9 157 10-202 55-218 (268)
239 2fp8_A Strictosidine synthase; 98.5 8.9E-05 3E-09 76.0 28.2 153 10-194 19-216 (322)
240 2hz6_A Endoplasmic reticulum t 98.4 3.3E-08 1.1E-12 104.5 1.4 173 99-283 17-195 (369)
241 3mbr_X Glutamine cyclotransfer 98.4 3.5E-05 1.2E-09 75.6 21.1 166 2-202 12-187 (243)
242 3dr2_A Exported gluconolactona 98.4 7.8E-06 2.7E-10 83.3 17.1 176 4-201 80-273 (305)
243 1mda_H Methylamine dehydrogena 98.4 1.1E-05 3.6E-10 85.0 18.3 101 32-152 47-158 (368)
244 1yiq_A Quinohemoprotein alcoho 98.4 1.5E-05 5.2E-10 91.1 20.6 242 20-284 120-509 (689)
245 1kb0_A Quinohemoprotein alcoho 98.3 1.6E-05 5.3E-10 90.8 20.0 241 20-283 127-510 (677)
246 2ece_A 462AA long hypothetical 98.2 4.9E-05 1.7E-09 81.0 18.9 174 11-194 139-352 (462)
247 1kv9_A Type II quinohemoprotei 98.2 0.00012 4.2E-09 83.3 23.7 273 21-325 66-497 (668)
248 4a2l_A BT_4663, two-component 98.2 0.0028 9.6E-08 73.4 34.3 267 12-317 175-481 (795)
249 3qqz_A Putative uncharacterize 98.2 0.00041 1.4E-08 68.7 23.2 162 4-194 21-204 (255)
250 2p4o_A Hypothetical protein; p 98.1 0.0013 4.3E-08 66.9 27.2 223 10-269 32-277 (306)
251 4a2l_A BT_4663, two-component 98.1 0.0013 4.3E-08 76.4 30.4 267 12-318 133-438 (795)
252 1fwx_A Nitrous oxide reductase 98.1 2.5E-05 8.4E-10 86.0 14.7 177 10-194 134-361 (595)
253 1fwx_A Nitrous oxide reductase 98.1 9.5E-05 3.2E-09 81.4 18.5 215 19-280 99-361 (595)
254 2xe4_A Oligopeptidase B; hydro 98.1 0.00062 2.1E-08 78.5 25.9 158 11-194 175-354 (751)
255 3tc9_A Hypothetical hydrolase; 98.0 0.0015 5.1E-08 70.1 26.0 155 10-194 137-301 (430)
256 1w6s_A Methanol dehydrogenase 98.0 0.00077 2.6E-08 75.4 24.0 274 21-325 62-512 (599)
257 3v64_C Agrin; beta propeller, 98.0 0.0053 1.8E-07 63.8 29.0 155 10-194 34-191 (349)
258 1kv9_A Type II quinohemoprotei 98.0 0.00034 1.2E-08 79.6 21.1 242 21-284 117-492 (668)
259 3v9f_A Two-component system se 98.0 0.0077 2.6E-07 69.6 32.8 256 9-307 362-648 (781)
260 1flg_A Protein (quinoprotein e 97.9 0.002 6.7E-08 72.0 25.5 273 22-325 69-525 (582)
261 1ijq_A LDL receptor, low-densi 97.9 0.012 4.1E-07 60.0 29.6 143 23-194 3-152 (316)
262 2ad6_A Methanol dehydrogenase 97.9 0.0015 5.1E-08 72.8 24.4 272 21-325 62-503 (571)
263 3v65_B Low-density lipoprotein 97.9 0.0099 3.4E-07 62.6 28.8 152 13-194 80-234 (386)
264 3v9f_A Two-component system se 97.8 0.014 4.8E-07 67.3 32.3 257 9-307 312-603 (781)
265 2iwa_A Glutamine cyclotransfer 97.7 0.00071 2.4E-08 67.4 16.5 149 14-195 70-238 (266)
266 3p5b_L Low density lipoprotein 97.7 0.036 1.2E-06 58.6 30.6 144 22-194 84-234 (400)
267 4hw6_A Hypothetical protein, I 97.7 0.007 2.4E-07 64.8 25.1 157 10-193 139-303 (433)
268 1ijq_A LDL receptor, low-densi 97.7 0.034 1.2E-06 56.5 29.3 157 10-194 30-195 (316)
269 1w6s_A Methanol dehydrogenase 97.7 0.005 1.7E-07 68.8 24.1 161 15-200 111-348 (599)
270 3nol_A Glutamine cyclotransfer 97.7 0.0011 3.6E-08 65.6 16.0 134 19-184 94-245 (262)
271 3v64_C Agrin; beta propeller, 97.6 0.018 6.2E-07 59.7 25.9 158 10-194 73-234 (349)
272 2xzh_A Clathrin heavy chain 1; 97.6 0.092 3.1E-06 53.3 28.4 266 15-374 72-361 (365)
273 3v65_B Low-density lipoprotein 97.5 0.021 7.2E-07 60.1 25.4 158 10-194 116-277 (386)
274 3nok_A Glutaminyl cyclase; bet 97.5 0.007 2.4E-07 59.8 19.7 126 42-202 44-172 (268)
275 3p5b_L Low density lipoprotein 97.5 0.06 2E-06 56.8 28.4 160 9-195 111-278 (400)
276 2p4o_A Hypothetical protein; p 97.5 0.1 3.5E-06 52.5 29.0 199 52-282 32-243 (306)
277 3sov_A LRP-6, low-density lipo 97.5 0.047 1.6E-06 55.8 26.5 144 23-194 6-154 (318)
278 2ad6_A Methanol dehydrogenase 97.5 0.0024 8.1E-08 71.2 17.7 159 14-202 239-502 (571)
279 2p9w_A MAL S 1 allergenic prot 97.5 0.0037 1.3E-07 63.9 17.1 173 6-194 9-215 (334)
280 3mbr_X Glutamine cyclotransfer 97.5 0.0042 1.4E-07 60.8 16.9 131 21-183 74-223 (243)
281 2fp8_A Strictosidine synthase; 97.4 0.004 1.4E-07 63.5 17.7 154 10-194 126-313 (322)
282 3kya_A Putative phosphatase; s 97.4 0.055 1.9E-06 58.6 27.1 156 11-194 140-341 (496)
283 1k3i_A Galactose oxidase precu 97.4 0.0077 2.6E-07 68.1 21.5 114 14-154 190-325 (656)
284 3qqz_A Putative uncharacterize 97.4 0.013 4.5E-07 57.9 20.2 212 49-322 24-250 (255)
285 2xe4_A Oligopeptidase B; hydro 97.4 0.0046 1.6E-07 71.2 19.0 117 53-195 175-305 (751)
286 1flg_A Protein (quinoprotein e 97.3 0.0039 1.3E-07 69.5 16.3 159 14-202 250-524 (582)
287 1bpo_A Protein (clathrin); cla 97.3 0.26 8.8E-06 52.0 31.9 289 15-368 71-386 (494)
288 3sov_A LRP-6, low-density lipo 97.1 0.04 1.4E-06 56.3 21.1 164 11-201 80-245 (318)
289 3m0c_C LDL receptor, low-densi 97.1 0.18 6.2E-06 58.0 28.3 160 9-195 423-590 (791)
290 2xbg_A YCF48-like protein; pho 97.1 0.32 1.1E-05 49.5 30.7 258 9-312 35-318 (327)
291 3m0c_C LDL receptor, low-densi 97.0 0.26 8.9E-06 56.7 28.7 143 23-194 397-546 (791)
292 4hw6_A Hypothetical protein, I 97.0 0.075 2.5E-06 56.8 22.4 155 8-192 180-372 (433)
293 3s94_A LRP-6, low-density lipo 97.0 0.31 1E-05 54.5 28.2 164 10-201 84-250 (619)
294 2xbg_A YCF48-like protein; pho 96.7 0.6 2E-05 47.4 29.4 226 9-277 79-319 (327)
295 4a0p_A LRP6, LRP-6, low-densit 96.7 1.2 4.1E-05 49.8 30.0 146 22-195 7-156 (628)
296 2ism_A Putative oxidoreductase 96.6 0.72 2.5E-05 47.4 25.9 142 10-183 31-222 (352)
297 1n7d_A LDL receptor, low-densi 96.6 0.0074 2.5E-07 68.8 11.5 136 30-193 385-527 (699)
298 3tc9_A Hypothetical hydrolase; 96.6 0.091 3.1E-06 56.0 19.4 115 8-151 177-300 (430)
299 1n7d_A LDL receptor, low-densi 96.6 0.012 4.1E-07 67.1 13.0 158 10-194 406-571 (699)
300 3s94_A LRP-6, low-density lipo 96.5 0.89 3E-05 50.8 27.3 145 22-194 10-159 (619)
301 3amr_A 3-phytase; beta-propell 96.4 0.2 7E-06 51.4 19.6 154 10-193 68-262 (355)
302 1k3i_A Galactose oxidase precu 96.3 0.2 7E-06 56.3 21.0 97 102-198 220-327 (656)
303 3pbp_A Nucleoporin NUP82; beta 96.3 0.25 8.7E-06 51.9 19.6 141 19-190 30-208 (452)
304 1xi4_A Clathrin heavy chain; a 96.2 0.45 1.5E-05 57.2 22.9 285 16-368 72-386 (1630)
305 2p9w_A MAL S 1 allergenic prot 96.1 0.47 1.6E-05 48.3 20.2 114 54-194 15-168 (334)
306 3pbp_A Nucleoporin NUP82; beta 96.1 0.27 9.2E-06 51.7 18.3 95 99-194 39-158 (452)
307 3amr_A 3-phytase; beta-propell 96.0 0.31 1.1E-05 50.1 18.3 142 20-193 39-209 (355)
308 4a0p_A LRP6, LRP-6, low-densit 96.0 2.6 9E-05 47.0 29.8 157 10-194 340-508 (628)
309 3kya_A Putative phosphatase; s 95.9 0.23 7.8E-06 53.7 17.8 158 12-198 249-479 (496)
310 3sre_A PON1, serum paraoxonase 95.9 0.45 1.5E-05 49.1 19.0 156 11-194 51-252 (355)
311 3a9g_A Putative uncharacterize 95.4 0.36 1.2E-05 49.9 16.5 144 10-181 29-215 (354)
312 1tl2_A L10, protein (tachylect 95.4 0.35 1.2E-05 46.2 14.5 139 11-186 42-202 (236)
313 3das_A Putative oxidoreductase 95.1 0.83 2.8E-05 47.0 17.9 146 8-180 30-218 (347)
314 2g8s_A Glucose/sorbosone dehyd 95.1 0.38 1.3E-05 49.6 15.3 59 10-69 18-86 (353)
315 1cru_A Protein (soluble quinop 95.0 0.96 3.3E-05 48.4 18.8 62 9-70 26-98 (454)
316 2vpj_A Kelch-like protein 12; 94.5 2.8 9.7E-05 41.3 19.9 94 101-198 78-188 (301)
317 3a9g_A Putative uncharacterize 93.5 7.7 0.00026 39.6 24.9 101 52-182 29-153 (354)
318 3ii7_A Kelch-like protein 7; p 93.3 6.8 0.00023 38.6 20.1 148 21-198 12-182 (306)
319 3sre_A PON1, serum paraoxonase 93.1 0.75 2.6E-05 47.5 12.5 120 3-151 157-297 (355)
320 2ism_A Putative oxidoreductase 92.9 1.7 5.9E-05 44.5 15.1 99 53-182 32-153 (352)
321 2vpj_A Kelch-like protein 12; 92.6 1.1 3.9E-05 44.3 12.9 92 101-196 175-280 (301)
322 2xn4_A Kelch-like protein 2; s 92.1 8.1 0.00028 37.9 18.6 94 101-198 77-186 (302)
323 2xn4_A Kelch-like protein 2; s 91.9 1.4 4.7E-05 43.7 12.5 92 101-197 173-279 (302)
324 3ei3_A DNA damage-binding prot 91.7 8.4 0.00029 46.2 20.8 142 21-194 844-999 (1158)
325 2xzh_A Clathrin heavy chain 1; 90.8 15 0.00052 37.2 19.4 162 10-197 152-335 (365)
326 1tl2_A L10, protein (tachylect 90.3 0.61 2.1E-05 44.6 7.4 132 20-188 3-157 (236)
327 2be1_A Serine/threonine-protei 90.0 1.4 4.9E-05 45.0 10.5 144 22-191 11-181 (339)
328 4asc_A Kelch repeat and BTB do 90.0 2.2 7.6E-05 42.5 12.0 94 101-198 165-281 (315)
329 3ei3_A DNA damage-binding prot 90.0 38 0.0013 40.5 33.5 86 229-317 862-956 (1158)
330 3ii7_A Kelch-like protein 7; p 89.4 2.6 9E-05 41.7 12.0 149 20-196 55-227 (306)
331 1zgk_A Kelch-like ECH-associat 89.2 17 0.00057 35.8 17.8 155 18-197 22-196 (308)
332 3das_A Putative oxidoreductase 88.6 6.6 0.00022 40.2 14.3 105 52-184 32-160 (347)
333 4asc_A Kelch repeat and BTB do 88.3 6.1 0.00021 39.2 13.8 92 101-196 117-223 (315)
334 1bpo_A Protein (clathrin); cla 87.9 30 0.001 36.5 21.4 162 10-197 151-334 (494)
335 1cru_A Protein (soluble quinop 87.3 9.7 0.00033 40.4 15.3 104 53-184 28-164 (454)
336 1zgk_A Kelch-like ECH-associat 87.0 3.7 0.00013 40.7 11.3 92 101-196 184-289 (308)
337 2woz_A Kelch repeat and BTB do 86.6 4.2 0.00014 40.5 11.4 95 101-199 175-292 (318)
338 2woz_A Kelch repeat and BTB do 85.2 13 0.00045 36.7 14.4 91 102-196 128-233 (318)
339 3ott_A Two-component system se 84.4 58 0.002 36.6 32.8 216 10-271 63-299 (758)
340 3s25_A Hypothetical 7-bladed b 83.1 38 0.0013 33.5 26.0 259 17-315 21-292 (302)
341 3qhy_B Beta-lactamase inhibito 82.8 38 0.0013 33.2 19.5 89 100-194 80-168 (282)
342 2g8s_A Glucose/sorbosone dehyd 81.9 46 0.0016 33.6 24.8 102 52-183 18-149 (353)
343 3ott_A Two-component system se 81.8 73 0.0025 35.7 29.5 151 9-197 21-177 (758)
344 3sbq_A Nitrous-oxide reductase 81.0 3.6 0.00012 44.7 8.1 116 53-196 324-480 (638)
345 2zwa_A Leucine carboxyl methyl 80.7 41 0.0014 37.6 17.5 94 102-196 469-579 (695)
346 2zwa_A Leucine carboxyl methyl 80.6 18 0.0006 40.7 14.4 151 20-197 451-638 (695)
347 2wg3_C Hedgehog-interacting pr 80.5 23 0.0008 37.6 14.5 53 10-62 14-79 (463)
348 2uvk_A YJHT; unknown function, 79.4 7.8 0.00027 39.1 10.1 57 144-202 286-350 (357)
349 2be1_A Serine/threonine-protei 77.7 12 0.0004 38.2 10.6 109 94-202 13-138 (339)
350 1xi4_A Clathrin heavy chain; a 76.8 24 0.00081 42.9 14.0 161 9-195 150-332 (1630)
351 3sbq_A Nitrous-oxide reductase 74.0 9.9 0.00034 41.3 9.0 103 10-141 323-454 (638)
352 2wg3_C Hedgehog-interacting pr 73.4 44 0.0015 35.4 14.2 104 53-185 15-160 (463)
353 2uvk_A YJHT; unknown function, 67.2 17 0.00058 36.5 9.1 49 101-150 168-224 (357)
354 3qhy_B Beta-lactamase inhibito 60.1 64 0.0022 31.4 11.5 173 10-194 63-246 (282)
355 4gq2_M Nucleoporin NUP120; bet 59.4 33 0.0011 40.1 10.5 38 123-160 237-274 (950)
356 3uc1_A DNA gyrase subunit A; D 59.3 1.5E+02 0.005 29.6 20.6 155 10-194 95-279 (327)
357 3b7f_A Glycosyl hydrolase, BNR 59.1 1.5E+02 0.0053 29.8 16.0 68 122-191 177-259 (394)
358 1suu_A DNA gyrase subunit A; t 58.8 1.5E+02 0.005 29.4 20.9 72 122-194 100-181 (312)
359 3s25_A Hypothetical 7-bladed b 58.6 1.4E+02 0.0049 29.3 22.5 144 15-196 58-218 (302)
360 4fhn_B Nucleoporin NUP120; pro 55.4 96 0.0033 36.9 13.9 37 165-201 239-275 (1139)
361 4gq2_M Nucleoporin NUP120; bet 53.9 80 0.0027 36.8 12.5 37 165-201 237-273 (950)
362 3sbc_A Peroxiredoxin TSA1; alp 50.3 11 0.00037 35.7 3.6 40 584-630 143-182 (216)
363 3f7f_A Nucleoporin NUP120; nuc 49.8 1.3E+02 0.0045 33.6 12.7 35 124-160 224-258 (729)
364 1zi0_A DNA gyrase subunit A; b 44.0 2.4E+02 0.0083 27.6 20.5 73 121-194 94-176 (307)
365 3no0_A DNA gyrase subunit A; D 43.3 2.4E+02 0.008 27.3 18.9 155 9-194 67-246 (276)
366 3b7f_A Glycosyl hydrolase, BNR 41.5 2.9E+02 0.0097 27.7 14.8 47 22-69 23-74 (394)
367 3tue_A Tryparedoxin peroxidase 34.1 27 0.00094 33.0 3.6 40 584-630 147-186 (219)
368 4fhn_B Nucleoporin NUP120; pro 31.6 35 0.0012 40.7 4.8 37 124-160 240-276 (1139)
369 3no0_A DNA gyrase subunit A; D 30.3 3.7E+02 0.013 25.8 20.5 160 3-194 14-196 (276)
370 1sqj_A OXG-RCBH, oligoxylogluc 29.6 6.4E+02 0.022 28.3 18.5 54 9-63 14-75 (789)
371 1wp5_A Topoisomerase IV; broke 28.8 4.3E+02 0.015 26.0 20.3 145 19-194 3-174 (323)
372 3zwu_A Alkaline phosphatase PH 28.2 1.6E+02 0.0056 32.1 9.0 71 53-139 477-548 (592)
373 4a9v_A PHOX; hydrolase, beta-p 27.6 2.2E+02 0.0075 31.0 9.7 61 122-182 476-549 (592)
374 3zwu_A Alkaline phosphatase PH 27.4 1.7E+02 0.006 31.9 9.0 58 124-181 478-548 (592)
375 2rqx_A PMRD, polymyxin B resis 26.8 24 0.00083 27.4 1.4 23 585-607 50-72 (89)
376 3f7f_A Nucleoporin NUP120; nuc 25.5 73 0.0025 35.7 5.5 35 166-202 224-258 (729)
377 3q6k_A 43.2 kDa salivary prote 24.2 5.8E+02 0.02 25.9 20.2 157 10-194 87-306 (381)
378 4a9v_A PHOX; hydrolase, beta-p 22.0 3.2E+02 0.011 29.7 9.6 72 52-139 476-548 (592)
379 4gqc_A Thiol peroxidase, perox 21.1 62 0.0021 28.5 3.3 40 585-632 122-161 (164)
380 1sr4_A CDT A, cytolethal diste 20.5 1.2E+02 0.0041 28.1 5.0 59 99-160 106-167 (206)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.3e-37 Score=330.60 Aligned_cols=284 Identities=20% Similarity=0.315 Sum_probs=247.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|.++|.+++|+|++.+|++|+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs------------ 169 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS------------ 169 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe------------
Confidence 46789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|++|++||+.+++++.++.+|.+.|.+++|+|++.++++|+.|++|++||++++.++.++.+|
T Consensus 170 ----------------~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h 233 (410)
T 1vyh_C 170 ----------------ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233 (410)
T ss_dssp ----------------TTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ----------------CCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc-e-e--------------eeeeeee
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI-W-K--------------YCKPVKY 226 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v-~-~--------------~~~~l~s 226 (641)
...|.++.|+|++.++++|+.|++|++||+.+++....+.+|...+.++.....- + . ....+++
T Consensus 234 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE
Confidence 9999999999999999999999999999999999998888888777765432110 0 0 0112778
Q ss_pred eCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCc
Q psy9327 227 CNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGN 298 (641)
Q Consensus 227 ~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~ 298 (641)
++.|+.|++|| ..+..+..+. +...|.+++|+|+|.++++++.|+.+.+|+..++. +..+ ..++.. ++.++.
T Consensus 314 gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSS
T ss_pred EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCC
Confidence 88999999999 5556665554 57789999999999999999999999999976653 3333 223333 445678
Q ss_pred EEEEEeCCCCeEEEEe
Q psy9327 299 QVYYLDRECSPHVLRI 314 (641)
Q Consensus 299 ~v~~~~~dg~i~v~~~ 314 (641)
.+++++.||.+++|+.
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 9999999999999975
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-36 Score=313.09 Aligned_cols=285 Identities=26% Similarity=0.479 Sum_probs=231.4
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.++|++|.+.|++++|||++++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++++|++|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s---------- 74 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS---------- 74 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE----------
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC----------
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l 159 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+.|++|++||++++ .+...+
T Consensus 75 ------------------~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 75 ------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp ------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred ------------------CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 9999999999999999999999999999999999999999999999999999887 566788
Q ss_pred ccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 160 TGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+|...|.+++|+| ++..+++|+.|++|++||+++......+. ++...+..+... |... ...+++++.|+.|++||
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLPD-KPYMITASDDLTIKIWD 214 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEEC-CSTT-CCEEEEEETTSEEEEEE
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEE-EcCC-CCEEEEEcCCCeEEEEe
Confidence 99999999999999 67899999999999999998776655443 232333322111 1000 01267888999999999
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCc--EEEEEeCCC
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGN--QVYYLDREC 307 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~--~v~~~~~dg 307 (641)
.....+..+. +...|.+++|+|++.+|++++.|+.+.+|+..++. ++.+.. ++.. +...+. .++++..||
T Consensus 215 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g 294 (304)
T 2ynn_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (304)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE
T ss_pred CCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc
Confidence 4555666555 47889999999999999999999999999987765 334432 2222 223332 355555444
Q ss_pred CeEEEEeCC
Q psy9327 308 SPHVLRIDP 316 (641)
Q Consensus 308 ~i~v~~~~~ 316 (641)
+.+|.+..
T Consensus 295 -~~~~~~~~ 302 (304)
T 2ynn_A 295 -FTVLSLGN 302 (304)
T ss_dssp -EEEEECC-
T ss_pred -eEEEEecc
Confidence 66666554
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.1e-35 Score=309.32 Aligned_cols=278 Identities=16% Similarity=0.231 Sum_probs=240.0
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+|.+.|.+++|+|++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++.++++|+
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~------------ 116 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG------------ 116 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE------------
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe------------
Confidence 57899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+.++ +....+.+|.+.|.++.|++++. +++++.|++|++||+++++++..
T Consensus 117 ----------------~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 117 ----------------LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp ----------------TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEE
T ss_pred ----------------CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEE
Confidence 9999999999875 46677889999999999998875 89999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|.+.|.+++|+|++.++++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++||.
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~---~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF-PNG---NAFATGSDDATCRLFDL 255 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCEEEEET
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCC---CEEEEEcCCCcEEEEEC
Confidence 99999999999999999999999999999999999999999998887777664422 211 12778889999999994
Q ss_pred -CCcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCCC
Q psy9327 239 -KMEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDRECS 308 (641)
Q Consensus 239 -~~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg~ 308 (641)
....+..+.+ ...|.+++|+|+|.++++++.++.+.+|+...+. +..+ +.++.. +..++..+++++.|+.
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 4444544443 2479999999999999999999999999976553 2222 333333 4456789999999999
Q ss_pred eEEEE
Q psy9327 309 PHVLR 313 (641)
Q Consensus 309 i~v~~ 313 (641)
+++|+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99994
No 4
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-38 Score=368.12 Aligned_cols=288 Identities=25% Similarity=0.469 Sum_probs=237.2
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
+.++|++|+++|++++|||+|++|++|+.||.|++||+.+++.+..+..|.++|.+++|+|++++|++|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---------- 74 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS---------- 74 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE----------
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe----------
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l 159 (641)
.||.|++||+.+++.+.++.+|.+.|++++|+|+++++++|+.|++|++||++++ .+...+
T Consensus 75 ------------------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 75 ------------------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp ------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred ------------------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 8999999999999999999999999999999999999999999999999999987 778889
Q ss_pred ccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCC-ceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 160 TGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 160 ~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~-~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+|...|++++|+| ++..+++++.||+|++||+.+++....+..+. ..+.++... |.- -...+++++.++.|.+||
T Consensus 137 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYY-PLP-DKPYMITASDDLTIKIWD 214 (814)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEEC-CST-TCCEEEEECTTSEEEEEE
T ss_pred cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEE-ECC-CCCEEEEEeCCCEEEEEE
Confidence 99999999999999 88999999999999999998877766665432 333332211 100 011267788999999999
Q ss_pred -CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCcE-EEEEeCCCC
Q psy9327 238 -RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGNQ-VYYLDRECS 308 (641)
Q Consensus 238 -~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~~-v~~~~~dg~ 308 (641)
.....+..+. +...|.+++|+|+|.++++++.++.+.+|+..++. +..+.. ++.. +..++.. ++..+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (814)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCC
Confidence 4555555555 57789999999999999999999999999987654 333322 2222 2334432 355556777
Q ss_pred eEEEEeCCcc
Q psy9327 309 PHVLRIDPTE 318 (641)
Q Consensus 309 i~v~~~~~~~ 318 (641)
+.+|.+....
T Consensus 295 ~~~~~~~~~~ 304 (814)
T 3mkq_A 295 FTVLSLGNDE 304 (814)
T ss_dssp EEEEECSCCS
T ss_pred EEEEEcCCCC
Confidence 8888776543
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.9e-35 Score=304.01 Aligned_cols=282 Identities=15% Similarity=0.256 Sum_probs=238.9
Q ss_pred ceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECcc-----CcccccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRM-----NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~-----~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
..+|++|.+.|++++|+|++ ++|++|+.||+|++||+.. +..+..+.+|...|.+++|+|++.++++|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s----- 84 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS----- 84 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE-----
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe-----
Confidence 46899999999999999965 7999999999999999864 345677889999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||+.+++++..+.+|.+.|.+++|+|++.++++|+.|++|++||++ +++
T Consensus 85 -----------------------~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~ 140 (319)
T 3frx_A 85 -----------------------WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQC 140 (319)
T ss_dssp -----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCE
T ss_pred -----------------------CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCe
Confidence 99999999999999999999999999999999999999999999999999986 567
Q ss_pred EEEEccCCCCEEEEEEecC------CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 156 ICVLTGHNHYVMCAQFHPT------DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~------g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
+..+.+|...|.++.|+|. +..+++++.|++|++||+++.+....+.+|...+.++... |-- ..+++++.
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g---~~l~s~~~ 216 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDG---TLIASAGK 216 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTS---SEEEEEET
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCC---CEEEEEeC
Confidence 8899999999999999995 4489999999999999999999888888888777765422 211 12778889
Q ss_pred CeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-eccc-----------cc--eEEEE
Q psy9327 230 KHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLD-----------LP--IYITK 294 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d-----------~p--~~~~~ 294 (641)
|+.|++|| .....+..+.....|.+++|+|++.++++++.++ +.+|..+.+.+ ..+. .+ ...+.
T Consensus 217 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 295 (319)
T 3frx_A 217 DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWS 295 (319)
T ss_dssp TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEEC
T ss_pred CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEEC
Confidence 99999999 5566677777788999999999999999988765 66666554432 2211 11 12356
Q ss_pred EcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 295 IKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 295 ~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
.+|..+++++.||.+++|++.+.
T Consensus 296 pdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 296 ADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp TTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCEEEEeecCceEEEEEEeec
Confidence 78999999999999999998753
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=300.37 Aligned_cols=281 Identities=12% Similarity=0.197 Sum_probs=239.9
Q ss_pred ceeeccCCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
++.+++|.+.|.+++|+|+ +.+|++|+.||+|++||+..++. ...+.+|...|.+++|+|+++++++++
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s----- 99 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS----- 99 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-----
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-----
Confidence 4567899999999999985 56999999999999999987653 446789999999999999999999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||+.+++.+..+..|...+.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 100 -----------------------~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 100 -----------------------LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp -----------------------TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred -----------------------CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...+..|...|.+++|+|++++|++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~---~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDS---QLLVTASDDGYIKI 232 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTS---CEEEEECTTSCEEE
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCC---CEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999998888877666654322 211 12778899999999
Q ss_pred ecC-CCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEEeCCC
Q psy9327 236 CNR-KMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYLDREC 307 (641)
Q Consensus 236 ~d~-~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~~~dg 307 (641)
||. .......+. +...|.+++|+|++.+|++++.|+.+.+|+..++. +..+ ..++.. +..++..+++++.|+
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 994 445555544 47789999999999999999999999999987765 3333 223333 445678999999999
Q ss_pred CeEEEEe
Q psy9327 308 SPHVLRI 314 (641)
Q Consensus 308 ~i~v~~~ 314 (641)
.+++|+.
T Consensus 313 ~i~vwd~ 319 (321)
T 3ow8_A 313 EIHIYDC 319 (321)
T ss_dssp CEEEEEC
T ss_pred eEEEEeC
Confidence 9999985
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.6e-34 Score=302.49 Aligned_cols=280 Identities=17% Similarity=0.196 Sum_probs=239.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.++|++|.+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++..+++|+
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~----------- 125 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG----------- 125 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES-----------
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee-----------
Confidence 467899999999999999999999999999999999999988888888999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC------eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR------KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|+.+++|++... .....+.+|.+.|.+++|+|++..|++|+.|++|++||++++++
T Consensus 126 -----------------~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~ 188 (354)
T 2pbi_B 126 -----------------LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL 188 (354)
T ss_dssp -----------------TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred -----------------CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE
Confidence 9999999998653 34567778999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 ICVLTGHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
+..+.+|...|.+++|+| ++..+++|+.||+|++||++++++...+.+|...+.++... |-- ..+++++.|+.+
T Consensus 189 ~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~---~~l~s~s~D~~v 264 (354)
T 2pbi_B 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSG---DAFASGSDDATC 264 (354)
T ss_dssp EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCE
T ss_pred EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCC---CEEEEEeCCCeE
Confidence 999999999999999988 46899999999999999999999999998888777765432 211 127788899999
Q ss_pred EEecCC-CcceeeecC---CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc---ccceEE--EEEcCcEEEEE
Q psy9327 234 HICNRK-MEPLCNIHE---NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL---DLPIYI--TKIKGNQVYYL 303 (641)
Q Consensus 234 ~i~d~~-~~~~~~~~~---~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~---d~p~~~--~~~~g~~v~~~ 303 (641)
++||.+ ...+..+.. ...+.+++|+|+|.++++++.++.+.+|+..++. +..+ ..++.. +..++..++++
T Consensus 265 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 265 RLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEE
Confidence 999944 334443332 3468899999999999999999999999976654 3333 223332 45678899999
Q ss_pred eCCCCeEEEE
Q psy9327 304 DRECSPHVLR 313 (641)
Q Consensus 304 ~~dg~i~v~~ 313 (641)
+.|+.+++|+
T Consensus 345 s~D~~v~vW~ 354 (354)
T 2pbi_B 345 SWDHTLRVWA 354 (354)
T ss_dssp ETTSEEEEEC
T ss_pred cCCCCEEecC
Confidence 9999999994
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.3e-34 Score=309.60 Aligned_cols=277 Identities=16% Similarity=0.170 Sum_probs=224.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceee-EE-----
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI-VM----- 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~-~~----- 75 (641)
.++|++|.+.|++++|+|++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++.++++|+... ..
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 367899999999999999999999999999999999999999999999999999999999999999998322 11
Q ss_pred ----------------eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-----ccCCCCeEEEEEcc-CC
Q psy9327 76 ----------------AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-----LGHLDYIRTTFFHH-EY 133 (641)
Q Consensus 76 ----------------~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-----~~h~~~V~~v~fsp-~~ 133 (641)
++.+.+......|.....+++++.|++|++||+.+++.+..+ .+|...|.+++|++ ++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 218 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA 218 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC
Confidence 122233344445555667899999999999999999998888 67999999999987 78
Q ss_pred CEEEEEeCCCeEEEEECC-CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc
Q psy9327 134 PWILSASDDQTIRIWYWQ-SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 134 ~~l~sgs~Dg~I~vWd~~-~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
.+|++|+.|++|++||++ .++++..+.+|.+.|.+++|+|++..|+||+.|++|++||+++++....+..+..... .
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~--~ 296 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND--N 296 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC--C
T ss_pred CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc--c
Confidence 899999999999999998 5578889999999999999999999999999999999999999988776654321100 0
Q ss_pred cCCCceeeee-----eeeeeCCCeeEEEecC-CCcceeee-----cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 213 SKHPIWKYCK-----PVKYCNPKHTLHICNR-KMEPLCNI-----HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 213 ~~~~v~~~~~-----~l~s~~~d~~I~i~d~-~~~~~~~~-----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
....+..+.+ .+++++.++.|++||. ..+....+ .+...|.+++|+|+|.+|++|+.|+.+.+|+...
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0001222222 1677888999999993 34444333 3567899999999999999999888888887543
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-34 Score=297.92 Aligned_cols=282 Identities=15% Similarity=0.248 Sum_probs=221.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccc-cc-cccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKF-DE-HEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~-~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
++.|++|.++|.+++|+|+ +|++|+.||+|++||+..+ +.+..+ .. |.++|.+++|+|++.+|++|+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s------- 77 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS------- 77 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------
Confidence 5789999999999999997 8999999999999999875 344445 34 999999999999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECC-------CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-------QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.|++|++||.. ..+++..+.+|.+.|.+++|+|++.+|++|+.|++|++||+
T Consensus 78 ---------------------~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 78 ---------------------FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp ---------------------TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ---------------------CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 99999999985 34677889999999999999999999999999999999999
Q ss_pred CC----CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC--ceeeeccCCCceeeecccCCCceeeeeee
Q psy9327 151 QS----RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 151 ~~----~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
+. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ ++...+.+|...|.++... |-.. ...+
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-~~~l 214 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD-KTEG-VFRL 214 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-CSSS-SCEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec-CCCC-eeEE
Confidence 43 3678889999999999999999999999999999999999876 5677788888777764432 2100 1126
Q ss_pred eeeCCCeeEEEecCCC---------cceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE---e-cc---
Q psy9327 225 KYCNPKHTLHICNRKM---------EPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII---R-TL--- 286 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~---------~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I---~-~~--- 286 (641)
++++.|++|++||... .....+. +...|.+++|++++ ++++++.|+.+.+|+..++.. . ..
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 7888999999999332 1222232 56789999999775 799999999999999776632 1 11
Q ss_pred cc-ceEE--EEE--cCcEEEEEeCCCCeEEEEeCC
Q psy9327 287 DL-PIYI--TKI--KGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 287 d~-p~~~--~~~--~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.. ++.. +.. ++..+++++.||.+++|+++.
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11 3332 223 467899999999999998764
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=300.60 Aligned_cols=286 Identities=17% Similarity=0.269 Sum_probs=230.6
Q ss_pred ceeeccCCC-CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc---cccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSA-RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE---KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~-~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~---~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+.++.+|.+ .|.+++|+|+|++||+|+.||+|+|||+.+++... ...+|...|.+++|+|++.+|++|+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s------- 80 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS------- 80 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------
Confidence 678999988 99999999999999999999999999998775332 2357999999999999999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-- 153 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-- 153 (641)
.|++|++||..++ +++.++.+|.+.|.+++|+|++++|++|+.|++|++||++++
T Consensus 81 ---------------------~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 81 ---------------------FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp ---------------------TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred ---------------------CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 9999999999877 467889999999999999999999999999999999999875
Q ss_pred -eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc--eeeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 154 -NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR--KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 154 -~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~--~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||.++++ +...+.+|...|.++... |-- ..+++++.|
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g---~~l~s~s~D 215 (345)
T 3fm0_A 140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSG---QRLASCSDD 215 (345)
T ss_dssp EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTS---SEEEEEETT
T ss_pred eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCC---CEEEEEeCC
Confidence 4677889999999999999999999999999999999998775 345677777777664432 211 127788999
Q ss_pred eeEEEecCC--Cc--------------ceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe--------E-
Q psy9327 231 HTLHICNRK--ME--------------PLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI--------I- 283 (641)
Q Consensus 231 ~~I~i~d~~--~~--------------~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~--------I- 283 (641)
+.|++|+.. .. .+..+. +...|.+++|+|++..+++++.|+.+.+|+.+.+. +
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 999999831 10 111221 46789999999999999999999999999754331 0
Q ss_pred -ecc---ccceEE--EEEcC-cEEEEEeCCCCeEEEEeCCcch
Q psy9327 284 -RTL---DLPIYI--TKIKG-NQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 284 -~~~---d~p~~~--~~~~g-~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
... ..++.. ++.++ ..+++++.||.+++|+..+.+.
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 111 122332 33444 5899999999999999987554
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-33 Score=290.63 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=233.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..++.+|.+.|++++|+|++++|++|+.||.|++||..+++....+.+|..+|.+++|+|++.+|++|+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------- 84 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS----------- 84 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-----------
Confidence 356889999999999999999999999999999999999999899999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|+.|++||+++++++..+.+|.+.|.+++|+|+++++++|+.|++|++||+++++++..+.+
T Consensus 85 -----------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 85 -----------------DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RK 239 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~ 239 (641)
|...|.+++|+|++.++++++.|+.|++||+++++....+.. +...+.++. .+|--. .+++++.++.|++|| ..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGK---YILAATLDNTLKLWDYSK 223 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEE-ECTTSS---EEEEEETTTEEEEEETTT
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEE-ECCCCC---EEEEEcCCCeEEEEECCC
Confidence 999999999999999999999999999999999887766543 223333221 111111 166788999999999 44
Q ss_pred CcceeeecC-C---cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc---cceE--EEEEcCcEEEEEe--CCC
Q psy9327 240 MEPLCNIHE-N---TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD---LPIY--ITKIKGNQVYYLD--REC 307 (641)
Q Consensus 240 ~~~~~~~~~-~---~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d---~p~~--~~~~~g~~v~~~~--~dg 307 (641)
...+..+.. . ..+......+++.++++++.++.+.+|+..++. +..+. .++. .++.++..+++++ .|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 454544432 1 123333344678999999999999999987765 33332 2232 2556778888776 799
Q ss_pred CeEEEEeC
Q psy9327 308 SPHVLRID 315 (641)
Q Consensus 308 ~i~v~~~~ 315 (641)
.+++|+.+
T Consensus 304 ~i~~W~~d 311 (312)
T 4ery_A 304 TIKLWKSD 311 (312)
T ss_dssp CEEEEECC
T ss_pred cEEEecCC
Confidence 99999876
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-33 Score=319.21 Aligned_cols=311 Identities=15% Similarity=0.172 Sum_probs=250.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEecee-----eE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKM-----IV 74 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-----~~ 74 (641)
+..|.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++ ....+..|.++|.+++|+|++..+++++.. .+
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 46789999999999999999999999999999999987544 345677899999999999999999988732 22
Q ss_pred Eee------------eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 75 MAY------------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 75 ~~~------------~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
..| .+.+......|+....+++++.|++|++||..++++..++.+|.+.|.+++|+|++++|++|+.|
T Consensus 132 ~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 132 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp EETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC
Confidence 222 33455556677766779999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECCCCeeEEEEc-------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC---ceeeecc
Q psy9327 143 QTIRIWYWQSRNCICVLT-------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLVLSMK 212 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~-------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v~s~~ 212 (641)
++|++||..+++++..+. +|.+.|.+++|+|++.+|+|++.|++|++||+.+++....+.... ....++.
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 999999999999998884 799999999999999999999999999999999988877765321 1111111
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEecCCC-cceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc---
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICNRKM-EPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD--- 287 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d~~~-~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d--- 287 (641)
.. ...+++++.++.+++||... .....+ .+...|.+++|+|+|.+|++++.|+.+.+|+..++......
T Consensus 292 ~~------~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 292 WT------KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp EC------SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred Ec------CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC
Confidence 10 11266788999999999443 333333 35789999999999999999999999999998776543221
Q ss_pred --cceEEEE-EcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 288 --LPIYITK-IKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 288 --~p~~~~~-~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.++.... ..+..+++.+.|+.+++|+.....
T Consensus 366 h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 366 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred CcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence 1122211 246688999999999999887644
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.8e-34 Score=307.29 Aligned_cols=245 Identities=22% Similarity=0.377 Sum_probs=221.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+++|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++.++++|+
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s----------- 211 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS----------- 211 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe-----------
Confidence 568899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||++++.++.++.+|...|.+++|+|++.++++|+.|++|++||++++++...+.+
T Consensus 212 -----------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~ 274 (410)
T 1vyh_C 212 -----------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274 (410)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEecC--------------------CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee
Q psy9327 162 HNHYVMCAQFHPT--------------------DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC 221 (641)
Q Consensus 162 h~~~V~sl~fsp~--------------------g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~ 221 (641)
|...|.+++|+|+ +.++++|+.|++|++||++++++...+.+|...|.++.. +|--
T Consensus 275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~-~~~g--- 350 (410)
T 1vyh_C 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGG--- 350 (410)
T ss_dssp CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSSS---
T ss_pred CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE-cCCC---
Confidence 9999999999996 679999999999999999999999999888877776442 2211
Q ss_pred eeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 222 KPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
..+++++.|+.|++|| .....+..+. +...|.+++|+|++.++++|+.|+.+.+|+.
T Consensus 351 ~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 351 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 1167888999999999 4455555554 5778999999999999999999999998863
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-33 Score=317.57 Aligned_cols=288 Identities=17% Similarity=0.193 Sum_probs=234.7
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+.+|.+.|.+++|+|+++ .|++|+.|++|++||..+++.+..+.+|.+.|.+++|+|++.+|++|+
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s----------- 209 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG----------- 209 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE-----------
Confidence 46789999999999999987 599999999999999999988899999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-------GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-------~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|++|++||..+++++..+. +|.+.|.+++|+|++.+|++|+.|++|++||+++++
T Consensus 210 -----------------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 210 -----------------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp -----------------TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred -----------------CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 99999999999999988884 799999999999999999999999999999998876
Q ss_pred eEE-------------------------------------------EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 155 CIC-------------------------------------------VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 155 ~i~-------------------------------------------~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
++. .+.+|...|++++|+|++.+|++++.|++|++||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 544 3458999999999999999999999999999999
Q ss_pred cCCCceeeec-cCCCceeeeccc---------------------------------------------------------
Q psy9327 192 ISGLRKKNVA-PGMGKLVLSMKS--------------------------------------------------------- 213 (641)
Q Consensus 192 ~~~~~~~~~~-~~~~~~v~s~~~--------------------------------------------------------- 213 (641)
+.+++....+ .+|...+.++..
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 432 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 432 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence 9987765544 222222211100
Q ss_pred ---------------CCCceeeeee-----eeeeCCCeeEEEecCCCcc---eeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 214 ---------------KHPIWKYCKP-----VKYCNPKHTLHICNRKMEP---LCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 214 ---------------~~~v~~~~~~-----l~s~~~d~~I~i~d~~~~~---~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+..+.++ +++++.|+.|++||..... .....+...|.+++|+|+|.+|++++.+
T Consensus 433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d 512 (611)
T 1nr0_A 433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQS 512 (611)
T ss_dssp EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCC
Confidence 0011222222 6788899999999944322 2334567899999999999999999999
Q ss_pred eEEEEEcCCC-CeEec---c---ccceE--EEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 271 IKYAIVNGDH-GIIRT---L---DLPIY--ITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 271 ~k~~l~~~~~-g~I~~---~---d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+.+.+|+..+ +.+.. + ..++. .+..++..+++++.|+.+++|+++...
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 9999998766 44422 1 11222 255678999999999999999988643
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.6e-33 Score=291.28 Aligned_cols=281 Identities=14% Similarity=0.237 Sum_probs=227.9
Q ss_pred ceeeccCCCCeEEEEE-----cc-CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCCCEEEE
Q psy9327 2 LTKFETKSARVKGLSF-----HP-KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQPIFVS 68 (641)
Q Consensus 2 l~~~~~H~~~V~~l~f-----sp-dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~~~l~s 68 (641)
...|++|.+.|++++| ++ ++++|++|+.||+|++||+..+ .....+.+|..+|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4678999999999999 77 9999999999999999998653 345667899999999999999999999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
|+ .|++|++||+++++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++|
T Consensus 94 ~s----------------------------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 94 SS----------------------------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLW 145 (343)
T ss_dssp EE----------------------------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEE
T ss_pred Ec----------------------------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEE
Confidence 98 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEEc---cCCCCEEEEEEecCC----------CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCC
Q psy9327 149 YWQSRNCICVLT---GHNHYVMCAQFHPTD----------DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 149 d~~~~~~i~~l~---~h~~~V~sl~fsp~g----------~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~ 215 (641)
|+.. .+..... +|...|.+++|+|++ .++++++.|++|++||. ..+....+.+|...+.++...
T Consensus 146 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s- 222 (343)
T 2xzm_R 146 NILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSIS- 222 (343)
T ss_dssp ESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEEC-
T ss_pred eccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEEC-
Confidence 9984 3444443 799999999999987 79999999999999994 455566667776666654322
Q ss_pred CceeeeeeeeeeCCCeeEEEecC-C-CcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE---eccc---
Q psy9327 216 PIWKYCKPVKYCNPKHTLHICNR-K-MEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII---RTLD--- 287 (641)
Q Consensus 216 ~v~~~~~~l~s~~~d~~I~i~d~-~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I---~~~d--- 287 (641)
|-- ..+++++.|+.|++||. . ......+.....|.+++|+|++.++++++ ++.+.+|+..++.. ..+.
T Consensus 223 ~~g---~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 223 PNG---KYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp TTS---SEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCS
T ss_pred CCC---CEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCc
Confidence 111 12778889999999994 3 33444555567899999999999887654 56688998655431 1221
Q ss_pred -----------cce--EEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 288 -----------LPI--YITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 288 -----------~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
.++ ..+..++..+++++.||.+++|+++++
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 112 235677899999999999999998754
No 16
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=294.11 Aligned_cols=243 Identities=16% Similarity=0.232 Sum_probs=220.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+++|...|.+++|+|+++++++|+.||+|++||+.+++.+..+..|...+.+++|+|++.+|++|+
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~------------ 141 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT------------ 141 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEEC------------
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEc------------
Confidence 36889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.|+.|++||+++++....+..|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|
T Consensus 142 ----------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h 205 (321)
T 3ow8_A 142 ----------------HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 205 (321)
T ss_dssp ----------------TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred ----------------CCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
...|++++|+|++.+|++|+.|++|++||+++++....+.+|...+.++... |-- ..+++++.|+.|++|| ....
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s-p~~---~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC-PDD---THFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTSCEEEEETTTTE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC-CCC---CEEEEEeCCCcEEEEeCCCCE
Confidence 9999999999999999999999999999999999998998888777765432 211 1267888999999999 4556
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.+..+. +...|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 666554 578999999999999999988877777775
No 17
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=100.00 E-value=9.3e-36 Score=299.03 Aligned_cols=165 Identities=45% Similarity=0.759 Sum_probs=153.8
Q ss_pred CCcHHHHHHHHHhhcceeecCcchHHHHHHhhcCceeecCCCCCCceeeccCCC-CCCCCCCCCCcccccHHHHHHHHHh
Q psy9327 425 EGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRK-GPGIKENSHPATNIKLEQLIAKIQQ 503 (641)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (641)
+|+||+||++|++|+|++||+|+|++|++.|.+++++++++|++|++..++.|| +....++.+|++++++++|.++++.
T Consensus 29 AGsFe~A~~lLnrQ~Givnf~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~l~~~Lk~ 108 (320)
T 3mkr_B 29 AGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQL 108 (320)
T ss_dssp TTCHHHHHHHHHHHSCBCCCGGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHHHHHHHHHH
Confidence 499999999999999999999999999999999999999999999999999999 5555556799999999999999999
Q ss_pred hhhhcccccHHHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCC-Ccccccccccceeee
Q psy9327 504 CYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNG-DHGIIRTLDLPIYIT 580 (641)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-d~~~~r~le~~~y~t 580 (641)
||+++|+|||++|++.||.+||+++|++|++.+|..++|++|.+||||++||++|+ +.++.+ .++++|+|||++|||
T Consensus 109 gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELAAYFT 188 (320)
T 3mkr_B 109 CYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMAAYFT 188 (320)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999 445322 156799999999999
Q ss_pred eeCcceeEE
Q psy9327 581 KIKGNQVYY 589 (641)
Q Consensus 581 ~~~~~~~~~ 589 (641)
||++|++|-
T Consensus 189 ~c~Lqp~H~ 197 (320)
T 3mkr_B 189 HSNLQPVHM 197 (320)
T ss_dssp TSCCCHHHH
T ss_pred cCCCcHHHH
Confidence 999999884
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.4e-33 Score=294.10 Aligned_cols=279 Identities=12% Similarity=0.157 Sum_probs=217.0
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC-----------cccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~-----------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
..|...|.+++|+|||.+|++++ |+++++||.... ........|..+|.+++|+|++ .+++|+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s---- 100 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVAS---- 100 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEE----
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEE----
Confidence 35778899999999999998887 778888874211 1111122467789999999986 567776
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE----EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT----LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~----~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.||+|++||+.+++.+.. +.+|.+.|++++|+|++++|++|+.|++|++||+
T Consensus 101 ------------------------~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 101 ------------------------DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ------------------------TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ------------------------CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 899999999999875443 4589999999999999999999999999999999
Q ss_pred CCCeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccC--CCceeeecccCCCceeeeeeeeee
Q psy9327 151 QSRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYCKPVKYC 227 (641)
Q Consensus 151 ~~~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~~~l~s~ 227 (641)
++++++.++.+|.+.|++++|+|++ .+++||+.|++|++||+++++....+.. ++..+.++... |.- ...++++
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--~~~l~sg 233 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH-PQQ--SEVFVFG 233 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC-SSC--TTEEEEE
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec-CCC--CcceEEe
Confidence 9999999999999999999999987 5789999999999999999888776643 33334443221 100 0015678
Q ss_pred CCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEeccc---cceEE--EEEcCc-
Q psy9327 228 NPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIRTLD---LPIYI--TKIKGN- 298 (641)
Q Consensus 228 ~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~~~d---~p~~~--~~~~g~- 298 (641)
+.|+.|++|| .....+..+. +...|.+++|+|+| .+|++++.|+.+.+|+...+.+..+. .++.. ++.++.
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTT
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCe
Confidence 8999999999 5566666665 57899999999997 57999999999999998888765432 23333 334454
Q ss_pred EEEEEeCCCCeEEEEeCCc
Q psy9327 299 QVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 299 ~v~~~~~dg~i~v~~~~~~ 317 (641)
.+++++.|+++++|.+++.
T Consensus 314 llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEEETTSCEEEEECCC-
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 5678999999999999864
No 19
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=100.00 E-value=1.1e-35 Score=298.05 Aligned_cols=162 Identities=25% Similarity=0.372 Sum_probs=152.6
Q ss_pred CCcHHHHHHHHHhhcceeecCcchHHHHHHhhcCceeecCCC-CCCceeeccCCC-CCCCCCCCCCcccccHHHHHHHHH
Q psy9327 425 EGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLP-LLAPVMAFPTRK-GPGIKENSHPATNIKLEQLIAKIQ 502 (641)
Q Consensus 425 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 502 (641)
+|+||+||++|++|+|++||+|+|++|++.|.+++++++++| .+|++..++.|| +....++.+|+++ ++.+|.++++
T Consensus 41 AGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~~~~~~lP~i~-~l~~L~~~Lk 119 (325)
T 3mv2_A 41 AGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSEDQILPYVP-GLDVVNEKMN 119 (325)
T ss_dssp TTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSSCGGGCCBCCC-CHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCccccccccCCCCCC-CHHHHHHHHH
Confidence 499999999999999999999999999999999999999999 999999999999 5555556799999 9999999999
Q ss_pred hhhhhcccccHHHHHHHHHHHhhhcceeeecCHHHHHHHHHHHHHHhHHHHHHHHHH--HhhcCCCcccccccccceeee
Q psy9327 503 QCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIK--YAIVNGDHGIIRTLDLPIYIT 580 (641)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--~~l~~~d~~~~r~le~~~y~t 580 (641)
+||+++|+|||++|++.||.+|++++|++|++.+|+.++|++|.+||||++||++|+ ++| ++++++|+|||++|||
T Consensus 120 ~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l--~~~~~kR~lELAAYFT 197 (325)
T 3mv2_A 120 EGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSL--KEGNTVRMLELAAYFT 197 (325)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CTTCHHHHHHHHHHGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CcccHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 455 3357899999999999
Q ss_pred eeCcceeEE
Q psy9327 581 KIKGNQVYY 589 (641)
Q Consensus 581 ~~~~~~~~~ 589 (641)
||++|++|-
T Consensus 198 ~c~LQp~H~ 206 (325)
T 3mv2_A 198 KAKLSPIHR 206 (325)
T ss_dssp GSCCCHHHH
T ss_pred cCCCcHHHH
Confidence 999999884
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.5e-33 Score=292.30 Aligned_cols=244 Identities=17% Similarity=0.191 Sum_probs=203.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.|.+.|.+++|+|++ .+++|+.||+|+|||+.+++.+..+ .+|.+.|.+++|+|++.+|++|+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs------------ 146 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS------------ 146 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE------------
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe------------
Confidence 456789999999986 6889999999999999988765543 37999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.|++|++||+++++++.++.+|.+.|.+++|+|++. +|++|+.|++|++||++++++...+.
T Consensus 147 ----------------~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 147 ----------------KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp ----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred ----------------CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence 999999999999999999999999999999999875 78999999999999999999888774
Q ss_pred -cCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 161 -GHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 161 -~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.|...+.+++|+|+ +.++++|+.||+|++||+++++.+..+.+|...|.++... |--. .-+++++.|++|++||.
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fs-p~g~--~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFS-PHSV--PFLASLSEDCSLAVLDS 287 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEEC-SSSS--CCEEEEETTSCEEEECT
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEc-cCCC--eEEEEEeCCCeEEEEEC
Confidence 46667999999995 5789999999999999999999999999988888775432 2100 01678889999999994
Q ss_pred C-CcceeeecCCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe
Q psy9327 239 K-MEPLCNIHENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~-~~~~~~~~~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~ 282 (641)
+ .+.+....|...|.+++|+|++. ++++++.|+.+.+|...+..
T Consensus 288 ~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 288 SLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 4 44444445688999999999986 56788888888888765543
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.8e-33 Score=292.67 Aligned_cols=279 Identities=14% Similarity=0.209 Sum_probs=216.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeC------CCcEEEEECccCccccc----ccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLH------NGVIQLWDYRMNTLLEK----FDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~------dg~I~iWD~~~~~~l~~----~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
.+|+..|++++|||||.+|++|+. ||.|++|+..++..... ...|...|.+++|+|++.+++ ++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~-~s----- 112 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILV-AS----- 112 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEE-EE-----
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEE-EE-----
Confidence 469999999999999999999997 78899999877654333 346889999999999986554 54
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE----EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI----FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~----~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|++|++||+.+++.. ....+|.+.|++++|+|++++|++|+.|++|++||++
T Consensus 113 -----------------------~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~ 169 (357)
T 4g56_B 113 -----------------------DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS 169 (357)
T ss_dssp -----------------------TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred -----------------------CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 7999999999988654 3455899999999999999999999999999999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccC--CCceeeecccCCCceeeeeeeeeeC
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
+++++..+.+|...|++++|+|++. .+++++.|++|++||+++++....... +...+.++.. +|--. ..+++++
T Consensus 170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~-sp~~~--~~la~g~ 246 (357)
T 4g56_B 170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW-HPEKD--DTFACGD 246 (357)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE-CTTST--TEEEEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhh-hhccc--ceEEEee
Confidence 9999999999999999999999874 789999999999999999887665543 3334444332 11100 1156778
Q ss_pred CCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEe-cc--ccceEE--EEE-cCcE
Q psy9327 229 PKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIR-TL--DLPIYI--TKI-KGNQ 299 (641)
Q Consensus 229 ~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~-~~--d~p~~~--~~~-~g~~ 299 (641)
.++.|++|| .....+..+. +...|.+++|+|++ .+|++++.|+.+.+|+.+.+.+. .+ ..++.. +++ ++..
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~ 326 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSK 326 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCE
Confidence 999999999 4555555554 47789999999987 68999999999999998887654 22 223333 333 5789
Q ss_pred EEEEeCCCCeEEEEeCC
Q psy9327 300 VYYLDRECSPHVLRIDP 316 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~ 316 (641)
+++++.||.+++|++..
T Consensus 327 l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 327 FTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEETTSCEEEEECC-
T ss_pred EEEEcCCCeEEEEECCC
Confidence 99999999999999875
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.8e-32 Score=289.24 Aligned_cols=276 Identities=18% Similarity=0.281 Sum_probs=225.3
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc------------------CeEEEEEeCCCCEEEE
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG------------------PVRGICFHNQQPIFVS 68 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~------------------~V~~i~fsp~~~~l~s 68 (641)
+|.+.|.+++|+|+|++|++|+ ++++++|++.+++.+..+..|.. .|.+++|+|++.+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 68999999999988777765432 4999999999999999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
|+ .|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++|
T Consensus 141 ~~----------------------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iw 192 (393)
T 1erj_A 141 GA----------------------------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 192 (393)
T ss_dssp EE----------------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred Ec----------------------------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 98 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeec-------cCCCceeeecccCCCceee
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVA-------PGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~-------~~~~~~v~s~~~~~~v~~~ 220 (641)
|++++++...+. |...+.+++|+| ++.++++|+.|++|++||+++++....+ .+|...+.++..... -
T Consensus 193 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-g-- 268 (393)
T 1erj_A 193 DLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-G-- 268 (393)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT-S--
T ss_pred ECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC-C--
Confidence 999999988886 667899999999 8999999999999999999998876655 344455554332110 0
Q ss_pred eeeeeeeCCCeeEEEecCCC-------------cce-eeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ec
Q psy9327 221 CKPVKYCNPKHTLHICNRKM-------------EPL-CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RT 285 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~~-------------~~~-~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~ 285 (641)
..+++++.|+.|++||... ... ....+...|.+++|+|++.++++++.|+.+.+|+..++.. ..
T Consensus 269 -~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 269 -QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp -SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 1267888999999999432 111 2223567899999999999999999999999999877643 23
Q ss_pred c---ccceEEEEE--------cCcEEEEEeCCCCeEEEEeCC
Q psy9327 286 L---DLPIYITKI--------KGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 286 ~---d~p~~~~~~--------~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+ ..++..... +++.+++++.||.+++|++..
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 2 223332221 467899999999999998864
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-32 Score=283.55 Aligned_cols=250 Identities=15% Similarity=0.213 Sum_probs=208.2
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc--CcccccccccccCeEEEEEeC--CCCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM--NTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~--~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~ 76 (641)
|+..+.+|.+.|.+++|+|+|++|++|+.||+|+|||+.. ++.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 1 ~~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s------ 74 (297)
T 2pm7_B 1 MVVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 74 (297)
T ss_dssp -CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE------
T ss_pred CceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc------
Confidence 6788999999999999999999999999999999999974 467788999999999999986 388999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.|++|++||+++++ .+..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++
T Consensus 75 ----------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 75 ----------------------YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp ----------------------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred ----------------------CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 99999999999874 56778899999999999997 88999999999999999987
Q ss_pred Ce--eEEEEccCCCCEEEEEEecC-------------CCEEEEEeCCCeEEEEecCCCc----eeeeccCCCceeeeccc
Q psy9327 153 RN--CICVLTGHNHYVMCAQFHPT-------------DDIVVSASLDQTIRVWDISGLR----KKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~~--~i~~l~~h~~~V~sl~fsp~-------------g~~lvSgs~DgtI~IWD~~~~~----~~~~~~~~~~~v~s~~~ 213 (641)
+. ....+.+|...|.+++|+|+ +..|++|+.|++|++||+++++ ....+.+|...|.++..
T Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 63 24667899999999999997 5799999999999999998765 55677788888877553
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc---c-eeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME---P-LCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~---~-~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. |-......+++++.|++|++||.+.. . ...+ .+...|.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 213 s-p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 213 S-PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp C-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred C-CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 2 21100122778899999999994321 1 1122 236789999999999999999999999998743
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.7e-32 Score=284.39 Aligned_cols=243 Identities=14% Similarity=0.210 Sum_probs=208.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~ 77 (641)
+..+..|.+.|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|.+.|.++.|++++. +++++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s------- 161 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSS------- 161 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEE-------
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEE-------
Confidence 35678899999999999999999999999999999997653 4556778999999999999875 77776
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|++|++||+++++++.++.+|.+.|.+++|+|++.++++|+.|++|++||++++.++.
T Consensus 162 ---------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 162 ---------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp ---------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred ---------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
++.+|...|++++|+|++..|++|+.||+|++||+++++....+...+ ..+.++. ++|-- ..+++++.++.|++
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~-~s~~g---~~l~~g~~d~~i~v 296 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS-FSKSG---RLLLAGYDDFNCNV 296 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTS---SEEEEEETTSEEEE
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE-ECCCC---CEEEEECCCCeEEE
Confidence 999999999999999999999999999999999999887766554221 2333322 11111 12678889999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|| .....+..+. +..+|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 297 wd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99 4555555554 578999999999999999999999888885
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=280.19 Aligned_cols=290 Identities=14% Similarity=0.183 Sum_probs=243.8
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|.++|.+++|+|++.+|++++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------------ 93 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS------------ 93 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe------------
Confidence 46899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCe---
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRN--- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~--- 154 (641)
.|+.|++||+.+++.+..+. |...|.+++|+|++.++++++.+ +.|++||+....
T Consensus 94 ----------------~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 94 ----------------ADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp ----------------TTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred ----------------CCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 99999999999999999888 89999999999999999999999 999999987653
Q ss_pred --------eEEEEccCCC--CEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCceeeeee
Q psy9327 155 --------CICVLTGHNH--YVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 155 --------~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
.+..+..|.+ .+.+++|+|++..+++++.||.|++||+++ .+....+..+...+.++... |-- ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~ 232 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDL---TY 232 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTS---SE
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCC---CE
Confidence 3445566776 999999999999999999999999999998 67777777777666654422 111 11
Q ss_pred eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCe--------------EEEEEcCCCCeE-ecc-
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI--------------KYAIVNGDHGII-RTL- 286 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~--------------k~~l~~~~~g~I-~~~- 286 (641)
+++++.++.|.+|| ........+.....+.+++|+|++.++++++.++ .+.+|+...+.. ..+
T Consensus 233 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 233 FITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred EEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 66778999999999 5567777777889999999999999999999877 677777655432 221
Q ss_pred --ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 287 --DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 287 --d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
..++.. +..++..+++++.||.+++|+++.....++...
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDV 355 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCHH
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHHH
Confidence 223332 445788999999999999999998766554443
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-31 Score=308.77 Aligned_cols=280 Identities=18% Similarity=0.296 Sum_probs=234.9
Q ss_pred eeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCc-----ccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNT-----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+++|.+.|++++|+|++ ++|++|+.||+|++||+.+.. ....+.+|...|.+++|+|++.+|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs------ 449 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS------ 449 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE------
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe------
Confidence 4688999999999999875 799999999999999987643 3456789999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||.......
T Consensus 450 ----------------------~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 450 ----------------------WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp ----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred ----------------------CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 9999999999999999999999999999999999999999999999999998655433
Q ss_pred EEE---ccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 157 CVL---TGHNHYVMCAQFHPTD--DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 157 ~~l---~~h~~~V~sl~fsp~g--~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
... .+|...|.+++|+|++ ..+++|+.|++|++||+++.+....+.+|...+.++... |-- ..+++++.|+
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg---~~l~sg~~Dg 583 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDG---SLCASGGKDG 583 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTS---SEEEEEETTS
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCC---CEEEEEeCCC
Confidence 322 4789999999999986 689999999999999999999999998888777765432 211 1267888999
Q ss_pred eEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---------------------
Q psy9327 232 TLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL--------------------- 288 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~--------------------- 288 (641)
.|++|| .+...+..+.....+.+++|+|++.++++++.++ +.+|+.+++.+. .+..
T Consensus 584 ~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (694)
T 3dm0_A 584 VVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKV 662 (694)
T ss_dssp BCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTE-EEEEETTTTEEEEEECCCCC----------------CC
T ss_pred eEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCC-EEEEECCCCCChhhhccccccccccccccccccCCcee
Confidence 999999 5667777777788999999999999988877655 899998877532 2211
Q ss_pred ---ceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 289 ---PIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 289 ---p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
....+..++..+++++.||.+++|++.
T Consensus 663 ~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 663 IYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 011245678999999999999999875
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-31 Score=276.66 Aligned_cols=245 Identities=21% Similarity=0.322 Sum_probs=211.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+.+|..+|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|+++++++|+
T Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs----------- 116 (304)
T 2ynn_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS----------- 116 (304)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC-----------
Confidence 467889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|++|++||++++ .....+.+|...|.+++|+| ++..|++|+.|++|++||++++.+...+
T Consensus 117 -----------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 179 (304)
T 2ynn_A 117 -----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (304)
T ss_dssp -----------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred -----------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee
Confidence 9999999999887 66678999999999999999 5789999999999999999887766555
Q ss_pred c-cCCCCEEEEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 160 T-GHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 160 ~-~h~~~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
. +|...+..+.|+| ++.++++|+.|++|++||++++++...+.+|...+.++. ++|-.. .+++++.|+.|++|
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~-~~p~~~---~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV-FHPTLP---IIISGSEDGTLKIW 255 (304)
T ss_dssp ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE-ECSSSS---EEEEEETTSCEEEE
T ss_pred ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE-ECCCCC---EEEEEcCCCeEEEE
Confidence 4 5678899999987 678999999999999999999999999998887776643 233221 27788999999999
Q ss_pred c-CCCcceeeecC-CcceEEEEEcCCcc--EEEEecCCeEEEEEcC
Q psy9327 237 N-RKMEPLCNIHE-NTRVKSGAWDESGV--FIYTTSNHIKYAIVNG 278 (641)
Q Consensus 237 d-~~~~~~~~~~~-~~~I~sla~~p~g~--~L~t~s~~~k~~l~~~ 278 (641)
| .+......+.. ...+.+++|+|++. ++++|+.++.+.+.-+
T Consensus 256 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp ETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred ECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 9 45566666654 57899999999864 6888888876665543
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-31 Score=278.98 Aligned_cols=243 Identities=19% Similarity=0.338 Sum_probs=204.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..|++|...|.+++|+|++.+|++|+.||+|++||+.+++.+..+.+|.++|.+++|+|++.++++|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------- 126 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS----------- 126 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE-----------
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe-----------
Confidence 457899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC------CEEEEEeCCCeEEEEECCCCee
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY------PWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~------~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||++ ++++.++.+|.+.|.+++|+|.. ..+++|+.|++|++||+++.++
T Consensus 127 -----------------~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 127 -----------------RDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp -----------------TTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred -----------------CCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 99999999997 56788899999999999999954 4899999999999999999999
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...+.+|...|.+++|+|++.+|++|+.||+|++||+.+++....+..+ ..+.++.. +|--. .++++ .+..+++
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~~~---~la~~-~~~~i~v 262 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF-SPNRY---WLAAA-TATGIKV 262 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE-CSSSS---EEEEE-ETTEEEE
T ss_pred heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE-cCCCC---EEEEE-cCCCcEE
Confidence 9999999999999999999999999999999999999999888777643 33444321 11100 02333 3455889
Q ss_pred ecCCCc-ceeee---------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 236 CNRKME-PLCNI---------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 236 ~d~~~~-~~~~~---------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
|+.... .+..+ .+...+.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 263 FSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 984322 22222 124578899999999999999998888888753
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-30 Score=271.02 Aligned_cols=276 Identities=11% Similarity=0.161 Sum_probs=229.2
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc-----ccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-----EHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~-----~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+|.+.|++++|+|+++++++++ ||.|++||+.+++....+. .|..+|.+++|+|++.++++++
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------- 116 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG--------- 116 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---------
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---------
Confidence 347999999999999999999999 9999999998876444433 6899999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.|++||+.+++ ....+..|...|.+++|+|+++++++++.|+.|++||+++++.+.
T Consensus 117 -------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 117 -------------------EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp -------------------SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred -------------------CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 99999999999887 677788899999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.+|...|.+++|+|++..+++++.|+.|++||+++++...... +...+.++.. +|-- ..+++++.++.+.+||
T Consensus 178 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~-s~~~---~~l~~~~~~~~i~~~~ 252 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGY-CPTG---EWLAVGMESSNVEVLH 252 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE-CTTS---SEEEEEETTSCEEEEE
T ss_pred eeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEE-CCCC---CEEEEEcCCCcEEEEE
Confidence 999999999999999999999999999999999999988776654 2333433221 1110 1156777899999999
Q ss_pred CCC-cceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc--ccceEE--EEEcCcEEEEEeCCCCeEE
Q psy9327 238 RKM-EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL--DLPIYI--TKIKGNQVYYLDRECSPHV 311 (641)
Q Consensus 238 ~~~-~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~--d~p~~~--~~~~g~~v~~~~~dg~i~v 311 (641)
... .......+...|.+++|+|++.++++++.++.+.+|+.+++... .. ..++.. +..++..+++++.||.+++
T Consensus 253 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 332 (337)
T 1gxr_A 253 VNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332 (337)
T ss_dssp TTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEE
Confidence 443 33344445789999999999999999999999999998776543 21 222322 4456889999999999999
Q ss_pred EEe
Q psy9327 312 LRI 314 (641)
Q Consensus 312 ~~~ 314 (641)
|++
T Consensus 333 w~~ 335 (337)
T 1gxr_A 333 YEV 335 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=279.44 Aligned_cols=239 Identities=19% Similarity=0.337 Sum_probs=191.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-------CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-------NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-------~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
|.+.|.+++|+|++++|++|+.||+|++||... .+.+..+.+|.++|.+++|+|++.+|++|+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s---------- 126 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS---------- 126 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE----------
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe----------
Confidence 999999999999999999999999999999853 345667889999999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCC----CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC--e
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR--N 154 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~--~ 154 (641)
.|++|++||+.. .+++..+.+|.+.|.+++|+|++.+|++|+.|++|++||..++ +
T Consensus 127 ------------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 127 ------------------RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE 188 (330)
T ss_dssp ------------------TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE
T ss_pred ------------------CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee
Confidence 999999999943 3677889999999999999999999999999999999998776 6
Q ss_pred eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC--------ceeeeccC-CCceeeecccCCCceeeeee
Q psy9327 155 CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL--------RKKNVAPG-MGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~--------~~~~~~~~-~~~~v~s~~~~~~v~~~~~~ 223 (641)
++..+.+|.+.|.+++|+|+ +..+++|+.|++|++||+++. .....+++ |...|.++..... ..
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~ 263 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GL 263 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SC
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CE
Confidence 88999999999999999998 679999999999999999764 23344443 5555555443211 12
Q ss_pred eeeeCCCeeEEEecCCCc---ceeee--cCCc-ceEEEEEcC--CccEEEEecCCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICNRKME---PLCNI--HENT-RVKSGAWDE--SGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d~~~~---~~~~~--~~~~-~I~sla~~p--~g~~L~t~s~~~k~~l~~~~ 279 (641)
+++++.|+.|++||.... ..... .+.. .|.+++|+| ++.+|++++.|+.+.+|+.+
T Consensus 264 l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 264 IASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 778889999999994332 22222 2344 899999999 68899999999999999754
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.5e-31 Score=295.39 Aligned_cols=281 Identities=23% Similarity=0.374 Sum_probs=234.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
++|+||++.|++++|||||++||+|+.||+|+|||. +++++.++.+|.++|.+++|+|++++|++++
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~------------ 76 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS------------ 76 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEE------------
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEe------------
Confidence 468999999999999999999999999999999994 7888999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--------
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-------- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-------- 154 (641)
.|++|++||. +++++.++.+|.++|.+++|+|+++++++++.|+.+++|+.....
T Consensus 77 ----------------~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~ 139 (577)
T 2ymu_A 77 ----------------DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS 139 (577)
T ss_dssp ----------------TTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCS
T ss_pred ----------------CCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCC
Confidence 9999999995 578899999999999999999999999999999999999965431
Q ss_pred --------------------------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 155 --------------------------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 155 --------------------------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.......|...|.++.|+|++..+++++.|++|++||. +++....+.
T Consensus 140 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~ 218 (577)
T 2ymu_A 140 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 218 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe
Confidence 12234567888999999999999999999999999996 456667777
Q ss_pred CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
++...+.++..... - ..+++++.++.+++||.+...+..+. +...|.+++|+|++..+++++.++.+.+|+.+..
T Consensus 219 ~~~~~v~~~~~s~d-g---~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~ 294 (577)
T 2ymu_A 219 GHSSSVRGVAFSPD-G---QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ 294 (577)
T ss_dssp CCSSCEEEEEECTT-S---SCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred cCCCCEEEEEECCC-C---CEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc
Confidence 77766665432211 0 11667889999999998777666655 4778999999999999999999999999997766
Q ss_pred eEeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 282 IIRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 282 ~I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.++.+. .++.. +..++..+++++.|+.+++|+.+...
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~ 336 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH 336 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE
T ss_pred EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 665542 22322 34568899999999999999977543
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-30 Score=270.59 Aligned_cols=282 Identities=16% Similarity=0.256 Sum_probs=235.9
Q ss_pred eeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECccCc-----ccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRMNT-----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~~~-----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.+|+||.+.|++|+|+|+ +++|+||+.||+|+|||+.+++ ....+.+|..+|.+++|+|++.++++++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~------ 105 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS------ 105 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE------
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc------
Confidence 579999999999999997 6799999999999999987653 4566788999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC- 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~- 155 (641)
.|+.|++|+...+........+...+..+.+++++++|++|+.|+.+++||......
T Consensus 106 ----------------------~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 106 ----------------------WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp ----------------------TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred ----------------------ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence 999999999999999999999999999999999999999999999999999976654
Q ss_pred EEEEccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 ICVLTGHNHYVMCAQFHPTD--DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g--~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
...+.+|...+.+++|++++ ..+++++.|++|++||+++++....+.+|...|.++... |--. .+++++.|+.|
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~---~l~s~s~Dg~i 239 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGS---LCASGGKDGQA 239 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSS---EEEEEETTCEE
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCC---EEEEEeCCCeE
Confidence 34457899999999999865 578999999999999999999999998888777765422 2111 26788899999
Q ss_pred EEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ecccc------------ceE--EEEEcC
Q psy9327 234 HICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDL------------PIY--ITKIKG 297 (641)
Q Consensus 234 ~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~------------p~~--~~~~~g 297 (641)
++|| .....+..+.....+.+++|+|++.++ +++.++.+.+|+.+.+.. ..+.. ++. .+..++
T Consensus 240 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 318 (340)
T 4aow_A 240 MLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG 318 (340)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred EEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence 9999 556777777788899999999998755 455688999998876643 22211 122 244578
Q ss_pred cEEEEEeCCCCeEEEEeCCc
Q psy9327 298 NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 298 ~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+++++.||.|++|++.++
T Consensus 319 ~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 319 QTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SEEEEEETTSCEEEEEEEC-
T ss_pred CEEEEEeCCCEEEEEeCCCc
Confidence 89999999999999999875
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-31 Score=279.27 Aligned_cols=278 Identities=15% Similarity=0.223 Sum_probs=225.7
Q ss_pred eeccCCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCC----CCEEEEec
Q psy9327 4 KFETKSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQ----QPIFVSGG 70 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~----~~~l~sgs 70 (641)
..++|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |.+.|.+++|+|+ +.++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 45677777788999999998887777664 4578999999999 66899997
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEE
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWY 149 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd 149 (641)
.|+.|++||+.+++.+..+.+|.+.|.+++|+| ++.+|++|+.|+.|++||
T Consensus 93 ----------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 93 ----------------------------SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp ----------------------------TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ----------------------------CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999 899999999999999999
Q ss_pred CCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC-----------------------
Q psy9327 150 WQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----------------------- 203 (641)
Q Consensus 150 ~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----------------------- 203 (641)
+++++++..+ .+|...|.+++|+|++..+++++.||.|++||+++++....+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999999998 78999999999999999999999999999999998765544332
Q ss_pred -----CCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcc--------------eeeec-CCcceEEEEEcCC--
Q psy9327 204 -----MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEP--------------LCNIH-ENTRVKSGAWDES-- 260 (641)
Q Consensus 204 -----~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~--------------~~~~~-~~~~I~sla~~p~-- 260 (641)
+...+.++... ...+++++.++.|++||. .... +..+. +...|.+++|+|+
T Consensus 225 ~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL------GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp EECSSCSSCCCEEEEE------TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred ccccCCcceEEEEEEc------CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 33333332221 112678889999999993 3222 23332 3567899999999
Q ss_pred ccEEEEecCCeEEEEEcCCCCe-----Eeccc-----cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 261 GVFIYTTSNHIKYAIVNGDHGI-----IRTLD-----LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 261 g~~L~t~s~~~k~~l~~~~~g~-----I~~~d-----~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
|.+|++++.++.+.+|+.+.+. +..+. .++.. +..++..+++++.||.+++|++.
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999999999987752 22232 33332 44578899999999999999875
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-31 Score=272.30 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=212.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+..|...|.+++|+|++.++++|+
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------- 126 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS----------- 126 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-----------
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-----------
Confidence 356789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.|+.|++||+++++.+..+..|.++|.+++|+|++.++++|+.|+.|++||+++++++..+.
T Consensus 127 -----------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 127 -----------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp -----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred -----------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec
Confidence 99999999999999999999999999999999999999999999999999999998887764
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEec-
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICN- 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d- 237 (641)
.|...+.+++|+|++.++++++.|+.|++||+++++....+.++.....++. ...+ -...+++++.|+.|++||
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 190 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT---GGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS---SSCEEEECCTTSCEEEEET
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC---CCcEEEEECCCCEEEEEEC
Confidence 5667899999999999999999999999999999988888776543322111 0000 011267888999999999
Q ss_pred CCCcceeeec-CCcceEEEEEcCCccEEEEec--CCeEEEEEcCC
Q psy9327 238 RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGD 279 (641)
Q Consensus 238 ~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~ 279 (641)
.....+..+. +...|.+++|+|++..+++++ .|+.+.+|..+
T Consensus 267 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 267 QTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 4455555554 477899999999999999886 57778888653
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-31 Score=278.45 Aligned_cols=242 Identities=19% Similarity=0.354 Sum_probs=197.3
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+|...|.+++|+|++.++++|+.||+|++||+++++.+..+.+|.++|.+++|+|++.+|++++
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~------------ 137 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG------------ 137 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE------------
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCC----------CEEEEEeCCCeEEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEY----------PWILSASDDQTIRIWY 149 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~----------~~l~sgs~Dg~I~vWd 149 (641)
.|++|++||+... ...... +|.+.|.+++|+|++ ++|++++.|++|++||
T Consensus 138 ----------------~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 138 ----------------AEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp ----------------TTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred ----------------CCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 9999999999844 333333 789999999999987 7999999999999999
Q ss_pred CCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCc-eeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 150 ~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~-~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
...+....+.+|...|.+++|+|+|.+|++|+.|++|++||+.+.. ....+. ++..+.++.. +|- ..+.+++
T Consensus 201 -~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~-sp~----~~~la~~ 273 (343)
T 2xzm_R 201 -TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAF-NPK----LQWVAVG 273 (343)
T ss_dssp -TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEE-CSS----SCEEEEE
T ss_pred -CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEE-CCC----CCEEEEE
Confidence 5567788899999999999999999999999999999999995433 333322 2333444322 221 1234455
Q ss_pred CCeeEEEecCC-Ccce--eee------------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 229 PKHTLHICNRK-MEPL--CNI------------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~~--~~~------------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
.++.+++||.. .... ..+ .+...+.+++|+|+|.+|++|+.|+.+.+|+.++
T Consensus 274 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 274 TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 78889999933 2221 122 2356799999999999999999999888887543
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-32 Score=288.52 Aligned_cols=241 Identities=13% Similarity=0.160 Sum_probs=191.6
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.++.|.++|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|.++|.+++|+|++.+|++++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s----------- 74 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS----------- 74 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-----------
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-----------
Confidence 35567889999999999999999999999999999988 78889999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe---e
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---C 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~---~ 155 (641)
.|++|++||+.+++ ....+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++++ +
T Consensus 75 -----------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 75 -----------------QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp -----------------TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC
T ss_pred -----------------CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee
Confidence 99999999999887 778888999999999999999999999999999999999887 4
Q ss_pred EEEEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC------------------ceeeeccCCCceeeecccCCC
Q psy9327 156 ICVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL------------------RKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 156 i~~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~------------------~~~~~~~~~~~~v~s~~~~~~ 216 (641)
...+.+ |...|++++|+|++.+|++++.|++|++||++.. +....+ +|...+.++... |
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p 215 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-P 215 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-T
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-C
Confidence 778887 9999999999999999999999999999999632 233333 444444443211 1
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcc----eeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEP----LCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~----~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
-- ..+++++.|+.|++|| ..... +..+. +...|.+++|+|+|.++++++.++.+..+.
T Consensus 216 ~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~ 279 (377)
T 3dwl_C 216 SG---NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQG 279 (377)
T ss_dssp TS---SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECC
T ss_pred CC---CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEe
Confidence 00 0177888999999999 44443 33333 467899999999999999998777774443
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.4e-31 Score=277.78 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=206.6
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC------cccccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+..|...|.+++|+|+|.++++|+.|+.+++|++... .....+..|.+.|.+++|+|++..+++++
T Consensus 100 ~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s------ 173 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS------ 173 (354)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEE------
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEe------
Confidence 456778899999999999999999999999999998643 23455678999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|++|++||+++++++.++.+|...|.+++|+| ++.+|++|+.|++|++||+++++
T Consensus 174 ----------------------~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 174 ----------------------GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ----------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ----------------------CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999999999999999999999988 46899999999999999999999
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
++..+.+|...|.+++|+|++..+++|+.|++|++||+++.+....+..+. ..+.++. ++|-- ..+++++.|+.
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~-~s~~g---~~l~~g~~d~~ 307 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD-FSLSG---RLLFAGYNDYT 307 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTS---SEEEEEETTSC
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE-EeCCC---CEEEEEECCCc
Confidence 999999999999999999999999999999999999999887766554322 1222211 11100 11677889999
Q ss_pred EEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 233 LHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
|++|| .++..+..+. +...|.+++|+|+|.+|++++.|+.+.+|+
T Consensus 308 i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 308 INVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999 4555555553 578999999999999999999999999884
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.1e-31 Score=278.52 Aligned_cols=282 Identities=13% Similarity=0.127 Sum_probs=229.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..|.++|++++|+|++++|++|+.||.|++||+.+++ .+..+..|..+|.+++|+|++.++++++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------- 71 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG----------- 71 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-----------
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-----------
Confidence 456799999999999999999999999999999999887 8888999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee----
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC---- 155 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~---- 155 (641)
.|+.|++||+++++.... +..|...|.+++|+|+++++++|+.|+.|++||++.+..
T Consensus 72 -----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 72 -----------------TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 134 (372)
T ss_dssp -----------------TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred -----------------CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee
Confidence 999999999999876544 467999999999999999999999999999999988762
Q ss_pred EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC------------------CCceeeeccCCCceeeecccCCCc
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS------------------GLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~------------------~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
.....+|...|.+++|+|++.++++++.||.|++||++ .++....+.++...+.++... |-
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 213 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-AN 213 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SS
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CC
Confidence 33336789999999999999999999999999999964 556666666666666554322 11
Q ss_pred eeeeeeeeeeCCCeeEEEec-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCC--CeE----------
Q psy9327 218 WKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH--GII---------- 283 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~--g~I---------- 283 (641)
- ..+++++.++.|++|| .....+..+.. ..+|.+++|+|++.+++++ .++.+.+|+..+ +..
T Consensus 214 ~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 289 (372)
T 1k8k_C 214 G---SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPK 289 (372)
T ss_dssp S---SEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC-
T ss_pred C---CEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccc
Confidence 0 1267788999999999 45666666654 5689999999999999888 888999998766 421
Q ss_pred -----------------------------e----ccccceEEE--E-EcC---cEEEEEeCCCCeEEEEeCCcc
Q psy9327 284 -----------------------------R----TLDLPIYIT--K-IKG---NQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 284 -----------------------------~----~~d~p~~~~--~-~~g---~~v~~~~~dg~i~v~~~~~~~ 318 (641)
. .-..++... . .++ ..+++++.||.+++|++++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 290 QSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 1 112233332 3 344 899999999999999988644
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-31 Score=281.76 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=201.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc----ccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK----FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~----~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
...+|.+.|.+++|+|++. +++++.||+|+|||+.+++.... ..+|.++|.+++|+|++.+|++|+
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs--------- 158 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG--------- 158 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE---------
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe---------
Confidence 3457899999999999986 55678899999999988765433 237999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|++|++||+++++++..+.+|.+.|++++|+|++. .+++++.|++|++||++++++...
T Consensus 159 -------------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~ 219 (357)
T 4g56_B 159 -------------------KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR 219 (357)
T ss_dssp -------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB
T ss_pred -------------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee
Confidence 999999999999999999999999999999999875 789999999999999999887655
Q ss_pred E--ccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 L--TGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l--~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
+ ..|...+++++|+|+ +.++++|+.|+.|++||+++++....+.++...|.++.....-- .-+++++.|++|++
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~---~~lasgs~D~~i~i 296 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSS---PFLASISEDCTVAV 296 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSS---CCEEEEETTSCEEE
T ss_pred eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCC---CEEEEEeCCCEEEE
Confidence 4 457788999999997 56899999999999999999999999988888777654321100 01678889999999
Q ss_pred ec-CCCcceeeecCCcceEEEEEcC-CccEEEEecCCeEEEEEcC
Q psy9327 236 CN-RKMEPLCNIHENTRVKSGAWDE-SGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 236 ~d-~~~~~~~~~~~~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~ 278 (641)
|| ...+.+....+...|.+++|+| ++.+|++++.|+.+.+|+.
T Consensus 297 wd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 297 LDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp ECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 99 4456666677789999999998 7999999999888888875
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-31 Score=277.84 Aligned_cols=249 Identities=16% Similarity=0.325 Sum_probs=198.8
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.++|.+.|.+++|+|++++|++|+.||+|++||...+ +.+..+.+|.++|.+++|+|++.+|++|+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s------------ 124 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS------------ 124 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE------------
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE------------
Confidence 3689999999999999999999999999999998776 45678889999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe--eEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN--CIC 157 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~--~i~ 157 (641)
.|++|++||+.++ .++..+.+|.+.|.+++|+|++.+|++|+.|++|++||.++++ +..
T Consensus 125 ----------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 125 ----------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp ----------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE
T ss_pred ----------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE
Confidence 9999999999876 4567888999999999999999999999999999999998875 567
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC--C---ceeeecc--cCCCceeeeee-----ee
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM--G---KLVLSMK--SKHPIWKYCKP-----VK 225 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~--~---~~v~s~~--~~~~v~~~~~~-----l~ 225 (641)
++.+|...|.+++|+|++.+|++|+.|++|++||............. . ..+..+. ....++.+.+. ++
T Consensus 189 ~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~ 268 (345)
T 3fm0_A 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALA 268 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEE
T ss_pred EecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEE
Confidence 89999999999999999999999999999999997432211111000 0 0011111 11223333332 77
Q ss_pred eeCCCeeEEEecCCCc-----ce----ee--ecCCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCC
Q psy9327 226 YCNPKHTLHICNRKME-----PL----CN--IHENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 226 s~~~d~~I~i~d~~~~-----~~----~~--~~~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g 281 (641)
+++.|+.+++|+.... +. .. ..+...|.+++|+|++ .+|++++.|+.+.+|+...+
T Consensus 269 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 8889999999983321 11 11 1356789999999997 59999999999999986554
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.6e-30 Score=291.54 Aligned_cols=276 Identities=24% Similarity=0.379 Sum_probs=236.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+|+++++++++.||+|++||... ..+..+..|..+|.+++|+|++.++++++
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----------- 363 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASAS----------- 363 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEE-----------
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEe-----------
Confidence 456789999999999999999999999999999999764 45677889999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|+.|++||. +++.+.++.+|...|++++|+|++++|++++.|+.|++||. +++.+..+.+
T Consensus 364 -----------------~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~ 424 (577)
T 2ymu_A 364 -----------------DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 424 (577)
T ss_dssp -----------------TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC
T ss_pred -----------------CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC
Confidence 9999999995 57888999999999999999999999999999999999995 6778889999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCc
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKME 241 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~ 241 (641)
|...|++++|+|++.+|++++.|++|++||.. ++....+.+|...+.++... |--. .+++++.|+.|++||.++.
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~s-pd~~---~las~~~d~~i~iw~~~~~ 499 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFS-PDGQ---TIASASDDKTVKLWNRNGQ 499 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEEC-TTSC---EEEEEETTSEEEEEETTSC
T ss_pred CCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEc-CCCC---EEEEEeCCCEEEEEcCCCC
Confidence 99999999999999999999999999999964 56667777777776654422 2111 2678889999999998777
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc---cceEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.+..+. +...|.+++|+|+|.+|++++.|+.+.+|+.....+..+. .++.. +..++..+++++.|+.+++|+
T Consensus 500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 500 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 776665 4789999999999999999999999999997655555542 23332 446788999999999999995
No 42
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=8.8e-32 Score=280.09 Aligned_cols=247 Identities=13% Similarity=0.174 Sum_probs=199.5
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeC--CCCEEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~~ 79 (641)
.+.+|.+.|++++|+|+|++|++|+.||+|++||+.+++ .+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s--------- 78 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS--------- 78 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE---------
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE---------
Confidence 457999999999999999999999999999999998764 4677889999999999975 488999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC--eeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCee
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|++||++++ +....+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++.+..
T Consensus 79 -------------------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 79 -------------------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp -------------------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred -------------------CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 9999999999987 467788999999999999998 78999999999999999987632
Q ss_pred ---EEEEccCCCCEEEEEEecC-----------------CCEEEEEeCCCeEEEEecCCC---ceeeeccCCCceeeecc
Q psy9327 156 ---ICVLTGHNHYVMCAQFHPT-----------------DDIVVSASLDQTIRVWDISGL---RKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 156 ---i~~l~~h~~~V~sl~fsp~-----------------g~~lvSgs~DgtI~IWD~~~~---~~~~~~~~~~~~v~s~~ 212 (641)
...+.+|...|.+++|+|+ +.+|++|+.|++|++||++.. +....+.+|...|.++.
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE
T ss_pred cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE
Confidence 3456789999999999997 468999999999999999754 45667778888887754
Q ss_pred cCCCceee-eeeeeeeCCCeeEEEecCCC----c-cee-eecCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 213 SKHPIWKY-CKPVKYCNPKHTLHICNRKM----E-PLC-NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 213 ~~~~v~~~-~~~l~s~~~d~~I~i~d~~~----~-~~~-~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. +|.... ...+++++.|++|++|+... . ... ...+...|.+++|+|+|.+|++++.|+.+.+|+..
T Consensus 220 ~-sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 220 W-APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp C-CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred e-cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 3 222100 11277899999999998432 1 111 12346789999999999999999999999999743
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=1.1e-30 Score=278.44 Aligned_cols=281 Identities=12% Similarity=0.110 Sum_probs=233.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc------ccccccccccCeEEEEEeCC----C---CEEEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT------LLEKFDEHEGPVRGICFHNQ----Q---PIFVS 68 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~------~l~~~~~h~~~V~~i~fsp~----~---~~l~s 68 (641)
...+++|.+.|++++|+| ++|++|+.||+|++||+.+++ .+..+..|..+|.+++|+|+ + .+|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 356789999999999999 799999999999999999887 67888899999999999999 9 99999
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-----EEEEccC-----CCCeEEEEEc----cCCC
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-----IFTLLGH-----LDYIRTTFFH----HEYP 134 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-----~~~~~~h-----~~~V~~v~fs----p~~~ 134 (641)
++ .|+.|++||+.+++. +..+..| .+.|.+++|+ |+++
T Consensus 87 ~~----------------------------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 87 TS----------------------------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp EE----------------------------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred Ec----------------------------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 98 999999999998887 8889989 5999999999 9999
Q ss_pred E-EEEEeCCCeEEEEECCC------CeeEE-----EE-------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 135 W-ILSASDDQTIRIWYWQS------RNCIC-----VL-------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 135 ~-l~sgs~Dg~I~vWd~~~------~~~i~-----~l-------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
+ |++|+.|+.|++||+++ ++++. .+ ..|...|.+++|+|++ .+++++.|+.|++||++++
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 217 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL 217 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC
Confidence 9 99999999999999998 66655 67 4589999999999999 9999999999999999999
Q ss_pred ceeeeccC---C---CceeeecccCCCceeeeeeeeeeCCC---eeEEEec-CCCcceeeec--------------CCcc
Q psy9327 196 RKKNVAPG---M---GKLVLSMKSKHPIWKYCKPVKYCNPK---HTLHICN-RKMEPLCNIH--------------ENTR 251 (641)
Q Consensus 196 ~~~~~~~~---~---~~~v~s~~~~~~v~~~~~~l~s~~~d---~~I~i~d-~~~~~~~~~~--------------~~~~ 251 (641)
+....+.. | ...+.++... |-- ..+++++.+ +.|++|| .....+..+. +...
T Consensus 218 ~~~~~~~~~~~h~~~~~~i~~i~~~-~~~---~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 218 RPLYNFESQHSMINNSNSIRSVKFS-PQG---SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp EEEEEEECCC---CCCCCEEEEEEC-SST---TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred ceeEEEeccccccccCCccceEEEC-CCC---CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 88888877 6 6666654432 111 115667778 9999999 4556565554 5788
Q ss_pred eEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc------------------------cceEE--EEEcC-------
Q psy9327 252 VKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD------------------------LPIYI--TKIKG------- 297 (641)
Q Consensus 252 I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d------------------------~p~~~--~~~~g------- 297 (641)
|.+++|+|++.+|++++.++.+.+|+..++. +..+. .++.. +..++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 9999999999999999999999999987764 33333 33333 44455
Q ss_pred ---cEEEEEeCCCCeEEEEeCCc
Q psy9327 298 ---NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 298 ---~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+++++.||.+++|+++++
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccceEEEecCCCcEEEEEcCCC
Confidence 68999999999999999865
No 44
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.4e-30 Score=282.11 Aligned_cols=251 Identities=12% Similarity=0.148 Sum_probs=202.5
Q ss_pred ceee-ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECcc---Ccccc-ccc-ccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 2 LTKF-ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRM---NTLLE-KFD-EHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 2 l~~~-~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~---~~~l~-~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+.++ ++|.+.|++++|+| ++++|++|+.||+|++||+.+ +.... ... .|.++|.+++|+|++.+|++|+
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---- 130 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS---- 130 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE----
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe----
Confidence 4677 89999999999999 999999999999999999977 43221 222 5899999999999999999998
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECC---CCeeEEEEcc------------CCCCeEEEE--EccCCCEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK---QRKCIFTLLG------------HLDYIRTTF--FHHEYPWIL 137 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---t~~~~~~~~~------------h~~~V~~v~--fsp~~~~l~ 137 (641)
.|++|++||+. +++....+.+ +.+.+.++. +++++.+++
T Consensus 131 ------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 131 ------------------------KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp ------------------------TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred ------------------------CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 99999999994 5554443332 455666766 557899999
Q ss_pred EEeCCCeEEEEECCCCeeEEEEcc--CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-CCCceeeecccC
Q psy9327 138 SASDDQTIRIWYWQSRNCICVLTG--HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKLVLSMKSK 214 (641)
Q Consensus 138 sgs~Dg~I~vWd~~~~~~i~~l~~--h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~~~~~v~s~~~~ 214 (641)
+|+.|+.|++||+++++++..+.+ |.+.|++++|+|++.+|++|+.||+|++||+++++....+. ++...+.++. .
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~-~ 265 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVE-V 265 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEE-E
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEE-e
Confidence 999999999999999999999988 89999999999999999999999999999999998888765 5555666542 1
Q ss_pred CCceee-eeeeeeeCCCeeEEEecC-CCcceeeec---------------------------CCcceEEEEEcCCccEEE
Q psy9327 215 HPIWKY-CKPVKYCNPKHTLHICNR-KMEPLCNIH---------------------------ENTRVKSGAWDESGVFIY 265 (641)
Q Consensus 215 ~~v~~~-~~~l~s~~~d~~I~i~d~-~~~~~~~~~---------------------------~~~~I~sla~~p~g~~L~ 265 (641)
+|.+.. ...+++++.|+.|++||. .+..+..+. +...|.+++|+ ++.+|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 222211 113778899999999994 344433332 34568899999 779999
Q ss_pred EecCCeEEEEEcCCCCe
Q psy9327 266 TTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 266 t~s~~~k~~l~~~~~g~ 282 (641)
+++.|+.+.+|+..++.
T Consensus 345 s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 345 TDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEGGGTEEEEEETTCGG
T ss_pred ecCCCCeEEEEECCCcc
Confidence 99999999999976653
No 45
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=3.8e-30 Score=276.08 Aligned_cols=235 Identities=20% Similarity=0.344 Sum_probs=197.3
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.|.+++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++.+|++++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-------------------- 184 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-------------------- 184 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--------------------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--------------------
Confidence 599999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE-------ccC
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL-------TGH 162 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-------~~h 162 (641)
.|++|++||++++++...+. +.+.+.+++|+| ++.+|++|+.|++|++||.++++++..+ .+|
T Consensus 185 --------~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 185 --------GDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp --------TTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC
T ss_pred --------CCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC
Confidence 99999999999999888876 667899999999 8999999999999999999999888777 689
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce------------eeeccCCCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK------------KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~------------~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
.+.|.+++|+|++.+|++|+.|++|++||+++... ...+.+|...+.++... |- ...+++++.|
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~---~~~l~sgs~D 331 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT-QN---DEYILSGSKD 331 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC-GG---GCEEEEEETT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC-CC---CCEEEEEeCC
Confidence 99999999999999999999999999999986432 23344454444443211 10 0126788899
Q ss_pred eeEEEec-CCCcceeeec-CCcceEEEEEcC------CccEEEEecCCeEEEEEcC
Q psy9327 231 HTLHICN-RKMEPLCNIH-ENTRVKSGAWDE------SGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p------~g~~L~t~s~~~k~~l~~~ 278 (641)
+.|++|| ..+..+..+. +...|.+++|++ ++.++++++.|+.+.+|+.
T Consensus 332 ~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 332 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999 4555555554 577899999876 6889999999988888864
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.9e-30 Score=261.01 Aligned_cols=281 Identities=16% Similarity=0.248 Sum_probs=229.9
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.|.+|.+.|++++| |++++|++|+.||.|++||+.+++....+..|.++|.+++|+|++.++++++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------- 78 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG----------- 78 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-----------
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-----------
Confidence 5689999999999999 9999999999999999999999988888999999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+... +.+..+.+|.+.|.+++| ++.++++++.|+.|++|| .++....
T Consensus 79 -----------------~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~ 137 (313)
T 3odt_A 79 -----------------KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYN 137 (313)
T ss_dssp -----------------TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEE
T ss_pred -----------------CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEe
Confidence 9999999998654 667888999999999999 567999999999999999 7788889
Q ss_pred EccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 159 LTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 159 l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+.+|...+.++.|+| ++..+++++.|+.|++|| ..+....+.. +...+.++... ....+++++.++.+++|
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~dg~i~i~ 210 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV-----DDGHFISCSNDGLIKLV 210 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE-----ETTEEEEEETTSEEEEE
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc-----CCCeEEEccCCCeEEEE
Confidence 999999999999999 899999999999999999 3444444444 44555443321 11126788899999999
Q ss_pred c-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc---ceEE--EEEcCcEEEEEeCCCC
Q psy9327 237 N-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL---PIYI--TKIKGNQVYYLDRECS 308 (641)
Q Consensus 237 d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~---p~~~--~~~~g~~v~~~~~dg~ 308 (641)
| .....+..+. +...|.+++|+|++ .+++++.++.+.+|+..++. +..+.. ++.. +..++. +++++.||.
T Consensus 211 d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 211 DMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred ECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence 9 4466666665 57899999999999 58899999999999987764 333322 3333 233444 778999999
Q ss_pred eEEEEeCCcchhhhHH
Q psy9327 309 PHVLRIDPTEFKFKLA 324 (641)
Q Consensus 309 i~v~~~~~~~~~~k~~ 324 (641)
+++|++++.+......
T Consensus 289 i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 289 VRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEEESCGGGCCC---
T ss_pred EEEEeCCCCceeehhh
Confidence 9999999876655443
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=1.6e-30 Score=279.55 Aligned_cols=277 Identities=17% Similarity=0.077 Sum_probs=228.0
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+++++|+|++++|++|+.||.|++||..+++....+..| ..+....|+|++.+|++|+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-------------------- 116 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGT-------------------- 116 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEE--------------------
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEE--------------------
Confidence 3458999999999999999999999999998887777766 4555567899999999998
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
.|+.|++||+.+++....+.+|.+.|++++|+|++.+|++|+.|++|++||+++++++..+.+|...|.+++
T Consensus 117 --------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 117 --------TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp --------TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred --------CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---Cceeeeccc------------CCCceeeee-----eeeeeCCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLVLSMKS------------KHPIWKYCK-----PVKYCNPK 230 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~~~v~s~~~------------~~~v~~~~~-----~l~s~~~d 230 (641)
|+|++..|++++.|++|++||+++++....+..+ ...+.++.. ..++..+.+ .+++++.+
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 268 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS 268 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999888777642 222222211 111111111 26788899
Q ss_pred eeEEEec-CCCcceeeec--CCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe--Eecc----ccceEE-EEEcCcE
Q psy9327 231 HTLHICN-RKMEPLCNIH--ENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI--IRTL----DLPIYI-TKIKGNQ 299 (641)
Q Consensus 231 ~~I~i~d-~~~~~~~~~~--~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~--I~~~----d~p~~~-~~~~g~~ 299 (641)
+.|++|| ........+. +...|.+++|+|++. ++++++.++.+.+|+..++. +..+ ..++.. ...++..
T Consensus 269 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 348 (420)
T 3vl1_A 269 GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGAL 348 (420)
T ss_dssp SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEE
T ss_pred CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCE
Confidence 9999999 4445444443 467899999999998 99999999999999987652 2222 223332 3456788
Q ss_pred EEEEeCCCCeEEEEeCC
Q psy9327 300 VYYLDRECSPHVLRIDP 316 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~ 316 (641)
+++++.|+.+++|++..
T Consensus 349 l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 349 FVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred EEEecCCccEEEEeccC
Confidence 99999999999999886
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=4.5e-30 Score=273.24 Aligned_cols=278 Identities=12% Similarity=0.108 Sum_probs=219.4
Q ss_pred ceeeccCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeC-CCCEEEEeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHN-QQPIFVSGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~ 77 (641)
++.+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. +|.+.|.+++|+| ++.++++++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------- 138 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS------- 138 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------
Confidence 46788999999999999999 899999999999999999887766665 6999999999999 678999997
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc---CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~---h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|+.|++||+++ ..+..+.. |...|.+++|+|++++|++|+.|+.|++||+ +++
T Consensus 139 ---------------------~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~ 195 (383)
T 3ei3_B 139 ---------------------IRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGH 195 (383)
T ss_dssp ---------------------TTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSC
T ss_pred ---------------------CCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCC
Confidence 999999999996 44555544 4488999999999999999999999999999 577
Q ss_pred eEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC----CceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG----LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~----~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
++..+.+|...|.+++|+|++. ++++|+.|++|++||+++ +.....+ ++...+.++.....-- ..+++++.
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~---~~l~~~~~ 271 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS---TKLLTTDQ 271 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS---CEEEEEES
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC---CEEEEEcC
Confidence 8899999999999999999998 999999999999999987 4445444 4556666544221011 12667789
Q ss_pred CeeEEEec-CCCcceeeec------------------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc-
Q psy9327 230 KHTLHICN-RKMEPLCNIH------------------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL- 288 (641)
Q Consensus 230 d~~I~i~d-~~~~~~~~~~------------------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~- 288 (641)
|+.|++|| ........+. ....+..++|+|+|.+ +++.++.+.+|+..++. +..+..
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC
Confidence 99999999 3333322221 1234555677777766 77889999999977664 444432
Q ss_pred ----c--eEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 289 ----P--IYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 289 ----p--~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
. ...+..++..+++++ |+.+++|++++
T Consensus 350 ~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 350 NAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 1 224666788888887 99999999875
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.4e-30 Score=271.60 Aligned_cols=250 Identities=15% Similarity=0.225 Sum_probs=209.1
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~ 76 (641)
++..+++|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+..|.++|.+++|+|+ +.+|++|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~------ 76 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 76 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE------
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec------
Confidence 467899999999999999999999999999999999998 66778888999999999999977 89999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.|+.|++||+.+++ .+..+.+|.+.|.+++|+|+ +.++++++.|+.|++||+++
T Consensus 77 ----------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 77 ----------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp ----------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCT
T ss_pred ----------------------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCC
Confidence 99999999999997 78888899999999999999 99999999999999999988
Q ss_pred Ce--eEEEEccCCCCEEEEEEec-------------CCCEEEEEeCCCeEEEEecCCCc----eeeeccCCCceeeeccc
Q psy9327 153 RN--CICVLTGHNHYVMCAQFHP-------------TDDIVVSASLDQTIRVWDISGLR----KKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~~--~i~~l~~h~~~V~sl~fsp-------------~g~~lvSgs~DgtI~IWD~~~~~----~~~~~~~~~~~v~s~~~ 213 (641)
+. ....+.+|...|.+++|+| ++..+++++.|+.|++||+++.. ....+.+|...+.++..
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 73 4556788999999999999 69999999999999999998765 33556667777766543
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc----ceeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME----PLCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~----~~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. |-......+++++.|+.|++||.... ..... .+...|.+++|+|+|.+|++++.++.+.+|+..
T Consensus 215 s-p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 215 S-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp C-CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred C-CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 2 21000122678889999999994321 11111 246789999999999999999988888888754
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=3.1e-29 Score=273.83 Aligned_cols=276 Identities=19% Similarity=0.319 Sum_probs=234.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEe--CCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs--p~~~~l~sgs~~~~~~~~~ 79 (641)
+..+.+|.+.|.+++|+|++ ++++|+.||+|++||+++++.+..+.+|.++|.+++|+ +++.++++|+
T Consensus 155 ~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s--------- 224 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS--------- 224 (464)
T ss_dssp EEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE---------
T ss_pred EEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc---------
Confidence 46788999999999999988 89999999999999999999999999999999999999 5778999997
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCe-----------------------eEEEEccCCCCeEEEEEccCCCEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-----------------------CIFTLLGHLDYIRTTFFHHEYPWI 136 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-----------------------~~~~~~~h~~~V~~v~fsp~~~~l 136 (641)
.|++|++||+.++. .+..+.+|...|.++ ++++.++
T Consensus 225 -------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l 283 (464)
T 3v7d_B 225 -------------------RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIV 283 (464)
T ss_dssp -------------------TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEE
T ss_pred -------------------CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEE
Confidence 99999999998765 256788899999877 5778899
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCC
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~ 216 (641)
++|+.|+.|++||+++++++..+.+|...|.+++|+|++..+++|+.||+|++||+++++....+.+|...+.++....
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~- 362 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD- 362 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888877755432
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc----ccce
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL----DLPI 290 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~----d~p~ 290 (641)
..+++++.|+.|++|| .........++...+..++|++++.++++++ ++.+.+|+.+++... .. ..++
T Consensus 363 -----~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v 436 (464)
T 3v7d_B 363 -----KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQI 436 (464)
T ss_dssp -----SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEE
T ss_pred -----CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcE
Confidence 1267888999999999 4455666666778888899999999999998 889999998887643 21 2233
Q ss_pred EEEEEcCcE-EEEEeCCCCeEEEEeC
Q psy9327 291 YITKIKGNQ-VYYLDRECSPHVLRID 315 (641)
Q Consensus 291 ~~~~~~g~~-v~~~~~dg~i~v~~~~ 315 (641)
.....++.. +++.+.||.+.+|.+|
T Consensus 437 ~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 437 WSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCEEEEEEEeCCeEEEEEee
Confidence 333444554 4556677777777654
No 51
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=5.2e-29 Score=291.03 Aligned_cols=202 Identities=25% Similarity=0.436 Sum_probs=176.2
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEecee-eEEeee--
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM-IVMAYQ-- 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-~~~~~~-- 78 (641)
+..+.+|.++|.+++|+|++++|++|+.||.|++||+.+++.+..+..|.+.|.+++|+|+++++++++.. .+..|+
T Consensus 48 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 46788999999999999999999999999999999999999999999999999999999999999998742 222222
Q ss_pred -------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEcc--CCCEEEEEeCC
Q psy9327 79 -------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHH--EYPWILSASDD 142 (641)
Q Consensus 79 -------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp--~~~~l~sgs~D 142 (641)
+.+......|.....+++++.|++|++||+.+++....+..|. ..+.+++|+| +++++++|+.|
T Consensus 128 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 2233334445456788899999999999999988888777655 8999999999 99999999999
Q ss_pred CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~ 203 (641)
+.|++||+++++++..+.+|...|.+++|+|+++.+++++.||+|++||+.+++....+..
T Consensus 208 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 208 LTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 9999999999999999999999999999999999999999999999999998776655543
No 52
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=269.05 Aligned_cols=313 Identities=15% Similarity=0.165 Sum_probs=216.4
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCccccccc-------------ccccCeEEEEEeC-CCCEEE
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFD-------------EHEGPVRGICFHN-QQPIFV 67 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~-------------~h~~~V~~i~fsp-~~~~l~ 67 (641)
..+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++....+. .|.++|.+++|+| ++.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999999 99999999999999999999887666553 5999999999999 777888
Q ss_pred Eece-eeEEeeec-------------eeeecccCCc--ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 68 SGGK-MIVMAYQG-------------CILESRNEPC--LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 68 sgs~-~~~~~~~~-------------~~~~~~~~~~--~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
+++. ..+..|+- .+......+. ....+++++.|+.|++||+++++.+..+.+|.+.|.+++|+|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 8873 33333321 1112222222 233788899999999999999999999999999999999999
Q ss_pred CCC-EEEEEeCCCeEEEEECCCCe-eEEEE---------------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 132 EYP-WILSASDDQTIRIWYWQSRN-CICVL---------------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 132 ~~~-~l~sgs~Dg~I~vWd~~~~~-~i~~l---------------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++ ++++|+.|+.|++||++++. ++..+ .+|...|.+++|+|++.+|++++.||.|++||+.+
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 998 58999999999999998765 44444 57899999999999999999999999999999998
Q ss_pred CceeeeccCCCceeeecc-cCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCe
Q psy9327 195 LRKKNVAPGMGKLVLSMK-SKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 195 ~~~~~~~~~~~~~v~s~~-~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
++......+......... ...........+..+..++.+.+|| .....+..+. +...|.+++|+|++.+|++++.|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCC
Confidence 876554433210000000 0000000011245566789999999 5566666665 578999999999999999999999
Q ss_pred EEEEEcCCCCeE-eccccc---eEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 272 KYAIVNGDHGII-RTLDLP---IYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 272 k~~l~~~~~g~I-~~~d~p---~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
.+.+|+.+.+.. ...+.. ..............+.++.+++|...
T Consensus 357 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 357 NILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CEEEEEECC---------------------------------------
T ss_pred eEEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCc
Confidence 999999877643 222111 11111223344456678999999654
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1e-29 Score=311.13 Aligned_cols=246 Identities=17% Similarity=0.270 Sum_probs=204.7
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+.+|.+.|++++|+|+|+++++|+.||+|++||..+++.+..+.+|.+.|.+++|+|++.++++|+
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------------- 676 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS------------- 676 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------------
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-------------
Confidence 5679999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++++.++.+|.+.|.+++|+| ++.++++|+.|+.|++||+++++++..+.+
T Consensus 677 ---------------~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 741 (1249)
T 3sfz_A 677 ---------------ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741 (1249)
T ss_dssp ---------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC
T ss_pred ---------------CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC
Confidence 999999999999999999999999999999999 556899999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC-------------ceeeecc----------------
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG-------------KLVLSMK---------------- 212 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~-------------~~v~s~~---------------- 212 (641)
|.+.|++++|+|++..+++++.||+|++||+++++....+.... ..+.++.
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 99999999999999999999999999999998876654432100 0111100
Q ss_pred -----------------cCCCceeeeee-----eeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEec
Q psy9327 213 -----------------SKHPIWKYCKP-----VKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 213 -----------------~~~~v~~~~~~-----l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s 268 (641)
...++..+.++ +++++.++.+.+|| .....+..+. +...|.+++|+|+|.++++++
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 01111122221 56677888888888 3344444443 467788888888888888888
Q ss_pred CCeEEEEEc
Q psy9327 269 NHIKYAIVN 277 (641)
Q Consensus 269 ~~~k~~l~~ 277 (641)
.++.+.+|+
T Consensus 902 ~dg~v~vw~ 910 (1249)
T 3sfz_A 902 DDQTIRVWE 910 (1249)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEE
Confidence 888887775
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.2e-29 Score=270.53 Aligned_cols=282 Identities=11% Similarity=0.116 Sum_probs=228.4
Q ss_pred ccCCCCe--EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 6 ETKSARV--KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 6 ~~H~~~V--~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+|.+.+ .+++|++ ..+++++.||.|++||+.+++....+.. |.+.|.+++|+|++.+|++|+
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~------------ 153 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL------------ 153 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE------------
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC------------
Confidence 3565553 4455554 5688899999999999999988777765 899999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCeeEEEEcc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNCICVLTG 161 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~-~~~~i~~l~~ 161 (641)
.||.|++||+.+++.+..+.+|.+.|.+++|+ +..+++|+.|+.|++||++ .+..+..+.+
T Consensus 154 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 154 ----------------GNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp ----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred ----------------CCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence 99999999999999999999999999999994 5689999999999999998 5677888999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee--CCCeeEEEec-C
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC--NPKHTLHICN-R 238 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~--~~d~~I~i~d-~ 238 (641)
|.+.|.+++|+|++.++++|+.|++|++||+++++....+.++...+.++... |--.. -++++ +.++.+++|| .
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-p~~~~--ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWC-PWQSN--LLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEEC-TTSTT--EEEEECCTTTCEEEEEETT
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEEC-CCCCC--EEEEecCCCCCEEEEEECC
Confidence 99999999999999999999999999999999998888887777666654422 11000 13343 3799999999 5
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEE--ecCCeEEEEEcCCCCeEe-cc-----ccceE--EEEEcCcEEEEEeCCCC
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYT--TSNHIKYAIVNGDHGIIR-TL-----DLPIY--ITKIKGNQVYYLDRECS 308 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t--~s~~~k~~l~~~~~g~I~-~~-----d~p~~--~~~~~g~~v~~~~~dg~ 308 (641)
....+..+.....|.+++|+|++..+++ |+.++.+.+|+..++... .. ..++. .+..++..+++++.||.
T Consensus 293 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 293 TGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp TCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred CCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 6777778888889999999999999999 558999999997775432 21 11222 35567889999999999
Q ss_pred eEEEEeCCcchhhh
Q psy9327 309 PHVLRIDPTEFKFK 322 (641)
Q Consensus 309 i~v~~~~~~~~~~k 322 (641)
+++|++.+++...+
T Consensus 373 i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 373 LKFWRVYDGDHVKR 386 (401)
T ss_dssp EEEEECCC------
T ss_pred EEEEECCCCccccc
Confidence 99999998665443
No 55
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-29 Score=271.09 Aligned_cols=274 Identities=15% Similarity=0.177 Sum_probs=233.5
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+|.+.|++++|+|++++|++|+.||.|++|| .+++.+..+..|..+|.+++|+|++.+|++++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------------- 168 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD---------------- 168 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE----------------
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe----------------
Confidence 3788999999999999999999999999999 67788888999999999999999999999998
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC---------------eEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY---------------IRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~---------------V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+.+++.+..+..|... +.+++|+|++ .+++++.|+.|++||++
T Consensus 169 ------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 169 ------------VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQIT 235 (425)
T ss_dssp ------------TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETT
T ss_pred ------------cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcC
Confidence 9999999999999999999988877 9999999985 58999999999999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCe
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH 231 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~ 231 (641)
+++.+..+.+|...|.+++|+|++..+++++.|+.|++||+++++....+.++...+.++.....- .+++++.++
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~d~ 310 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-----KVISCSMDG 310 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-----EEEEEETTS
T ss_pred CCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-----EEEEEeCCC
Confidence 999999999999999999999999999999999999999999998888888777777664432211 367788999
Q ss_pred eEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe---------------------Eecccc
Q psy9327 232 TLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI---------------------IRTLDL 288 (641)
Q Consensus 232 ~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~---------------------I~~~d~ 288 (641)
.+++|| .....+..+. +...+.+++|+|++.++++++.++.+.+|+..++. +..+..
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS 390 (425)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC
T ss_pred cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC
Confidence 999999 4555555554 37799999999999999999999999999876554 443322
Q ss_pred -----ceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 289 -----PIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 289 -----p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
++.. +..++..+++++.||.+++|+++
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 3333 34567889999999999999875
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.4e-28 Score=275.19 Aligned_cols=200 Identities=15% Similarity=0.274 Sum_probs=175.9
Q ss_pred ceeeccCCCC-eEEEEEcc--CCCeEEEEeCCCcEEEEECccC--------cccccccccccCeEEEEEeCCCCEEEEec
Q psy9327 2 LTKFETKSAR-VKGLSFHP--KRPWILSSLHNGVIQLWDYRMN--------TLLEKFDEHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 2 l~~~~~H~~~-V~~l~fsp--dg~~Lasg~~dg~I~iWD~~~~--------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs 70 (641)
+..+.+|.+. |++++|+| ++++|++|+.||+|++||+.++ +.+..+..|..+|.+++|+|++.++++++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 135 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 135 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEec
Confidence 4678999999 99999999 9999999999999999999754 67778888999999999999999999987
Q ss_pred ee-----eEEeee------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC---CeEEEEEc
Q psy9327 71 KM-----IVMAYQ------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD---YIRTTFFH 130 (641)
Q Consensus 71 ~~-----~~~~~~------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~---~V~~v~fs 130 (641)
.. .+..|+ +.+......|+....+++++.|+.|++||..+++.+..+.+|.+ .|.+++|+
T Consensus 136 ~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 136 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred cCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 43 233332 23444455566666888999999999999999999999999999 99999999
Q ss_pred cC-CCEEEEEeCCCeEEEEECCCCeeEEEE-c---cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 131 HE-YPWILSASDDQTIRIWYWQSRNCICVL-T---GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 131 p~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~---~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|+ +.++++++.|+.|++||+++++++..+ . +|...|.+++|+ ++..+++++.|++|++||+++++....+.
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99 999999999999999999999999999 6 899999999999 99999999999999999999877665544
No 57
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.9e-30 Score=275.59 Aligned_cols=280 Identities=15% Similarity=0.225 Sum_probs=232.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc----CcccccccccccCeEEEEEeCC-CCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM----NTLLEKFDEHEGPVRGICFHNQ-QPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~----~~~l~~~~~h~~~V~~i~fsp~-~~~l~sgs~~~~~~~~~~~ 81 (641)
.|.+.|++++|+|++.+|++|+.||.|++||+.+ .+.+..+..|.++|.+++|+|+ +.++++++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------- 133 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG----------- 133 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC-----------
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc-----------
Confidence 5889999999999999999999999999999987 3577888899999999999998 88999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe------eEEE---EccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK------CIFT---LLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~------~~~~---~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+.+++ .... +.+|.+.|.+++|+|+ +.++++++.|+.|++||++
T Consensus 134 -----------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 134 -----------------NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp -----------------SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred -----------------CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 99999999999886 3333 4679999999999999 7899999999999999999
Q ss_pred CCeeEEEEccC------CCCEEEEEEecCC-CEEEEEeCCC---eEEEEecCCC-ceeeecc-CCCceeeecccCCCcee
Q psy9327 152 SRNCICVLTGH------NHYVMCAQFHPTD-DIVVSASLDQ---TIRVWDISGL-RKKNVAP-GMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~~l~~h------~~~V~sl~fsp~g-~~lvSgs~Dg---tI~IWD~~~~-~~~~~~~-~~~~~v~s~~~~~~v~~ 219 (641)
+++++..+..| ...|.+++|+|++ .++++++.|+ .|++||++++ .....+. +|...+.++.....-
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~-- 274 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD-- 274 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC--
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC--
Confidence 99999999876 7899999999997 6999999999 9999999986 5566666 677777665432100
Q ss_pred eeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCc-cEEEEecCCeEEEEEcCCCCeEec-----------
Q psy9327 220 YCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESG-VFIYTTSNHIKYAIVNGDHGIIRT----------- 285 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g-~~L~t~s~~~k~~l~~~~~g~I~~----------- 285 (641)
...+++++.|+.|++|| .....+..+. +...|.+++|+|++ .++++++.++.+.+|+..++....
T Consensus 275 -~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 353 (416)
T 2pm9_A 275 -EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQE 353 (416)
T ss_dssp -SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---------
T ss_pred -CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccC
Confidence 01267788999999999 5566666654 47789999999998 899999999999999876543211
Q ss_pred ----------------------------cccc--eEEEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 286 ----------------------------LDLP--IYITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 286 ----------------------------~d~p--~~~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
...+ ...+..+|..+++++.|+.+++|++.+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 354 SETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 1112 2336678889999999999999998764
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=265.55 Aligned_cols=285 Identities=14% Similarity=0.154 Sum_probs=220.7
Q ss_pred eeeccCCCCeEEEEEccCCCeE-EEEeC---CCcEEEEECccCcccccc-cccccCeEEEEEeCC---CCEEEEeceeeE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWI-LSSLH---NGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQ---QPIFVSGGKMIV 74 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~L-asg~~---dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~---~~~l~sgs~~~~ 74 (641)
..+++|.+.|.+++|+|+++.+ ++|+. ||.|++||+.+++..... ..|..+|.+++|+|+ +.++++|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---- 87 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD---- 87 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE----
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec----
Confidence 3467899999999999999755 45655 899999999988765443 379999999999998 69999997
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEccCCCCeEEEEE------ccCCCEEEEEeCCCeEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLGHLDYIRTTFF------HHEYPWILSASDDQTIRI 147 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~~V~~v~f------sp~~~~l~sgs~Dg~I~v 147 (641)
.|+.|++||+.+++ ++..+.+|.+.|.+++| +|++++|++|+.|+.|++
T Consensus 88 ------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 88 ------------------------FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ------------------------TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ------------------------CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 99999999999988 89999999999999955 678999999999999999
Q ss_pred EECCCCe-eEEEEccCCC----CEEEEE----EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCce
Q psy9327 148 WYWQSRN-CICVLTGHNH----YVMCAQ----FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218 (641)
Q Consensus 148 Wd~~~~~-~i~~l~~h~~----~V~sl~----fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~ 218 (641)
||+++++ ++..+..|.+ .+.+++ |+|++.++++++.||.|++||+++++.... ..+...+.++... |.-
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~-~~~ 221 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFD-RKD 221 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEES-CSS
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcC-CCC
Confidence 9999887 6778876655 799998 678999999999999999999999887544 3345555554322 100
Q ss_pred eeeeeeeeeCCCeeEEEec-CCCcceeee------cCCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCCCe--------
Q psy9327 219 KYCKPVKYCNPKHTLHICN-RKMEPLCNI------HENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDHGI-------- 282 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d-~~~~~~~~~------~~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~g~-------- 282 (641)
.-...+++++.++.|.+|| ........+ .+...|.+++|+|++. ++++++.++.+.+|+.+.+.
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 0011266778999999999 333333222 4578999999999998 89999999999999865431
Q ss_pred ------------Eecc---ccceEE--EEEcCcEEE-EEeCCCCeEEEEeCCc
Q psy9327 283 ------------IRTL---DLPIYI--TKIKGNQVY-YLDRECSPHVLRIDPT 317 (641)
Q Consensus 283 ------------I~~~---d~p~~~--~~~~g~~v~-~~~~dg~i~v~~~~~~ 317 (641)
+..+ ..++.. +..++..++ +++.||.+++|++...
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 2111 222322 445677776 8999999999999864
No 59
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.4e-29 Score=275.37 Aligned_cols=282 Identities=14% Similarity=0.176 Sum_probs=209.2
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcc--cccccccccCeEEEEEeC-CCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~ 78 (641)
....+|..+|+||+||| ++++||+|+.||+|+|||+.+++. ...+.+|.++|++|+|+| ++.+|++|+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------- 184 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------- 184 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC--------
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe--------
Confidence 45678999999999999 567999999999999999987654 345668999999999998 688999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++........ +...+.+++|+|++.+|++|+.|+.|++||++. +++
T Consensus 185 --------------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~ 243 (435)
T 4e54_B 185 --------------------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KEL 243 (435)
T ss_dssp --------------------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBC
T ss_pred --------------------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-cee
Confidence 999999999987765444433 344678999999999999999999999999864 567
Q ss_pred EEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeec---cCCCceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 157 CVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVA---PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~---~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
..+.+|...|++++|+|++. ++++|+.|++|++||+++.+....+ .+|...|.++.. +|-- ..+++++.|+.
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-spdg---~~l~s~~~D~~ 319 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF-SPDG---ARLLTTDQKSE 319 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB-CTTS---SEEEEEESSSC
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeE-CCCC---CeeEEEcCCCE
Confidence 78899999999999999875 7889999999999999887655443 345566665432 2211 12778889999
Q ss_pred EEEec-CCCcceeeecC-------CcceEEEEEcCCccEEEEec------------CCeEEEEEcCCCCeEe-ccccc--
Q psy9327 233 LHICN-RKMEPLCNIHE-------NTRVKSGAWDESGVFIYTTS------------NHIKYAIVNGDHGIIR-TLDLP-- 289 (641)
Q Consensus 233 I~i~d-~~~~~~~~~~~-------~~~I~sla~~p~g~~L~t~s------------~~~k~~l~~~~~g~I~-~~d~p-- 289 (641)
|++|| ..+.....+.. ...+....|+|++..++++. .++.+.+|+.++|.+. .+..+
T Consensus 320 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~ 399 (435)
T 4e54_B 320 IRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPES 399 (435)
T ss_dssp EEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSC
T ss_pred EEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCC
Confidence 99999 33443332211 12234567777776666653 2345778887776543 22111
Q ss_pred -----eEEEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 290 -----IYITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 290 -----~~~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+..++.+|..+++++ |+.|++|++.+++
T Consensus 400 ~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 400 SGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred CcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 223556788888765 7899999988764
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.5e-29 Score=289.83 Aligned_cols=242 Identities=20% Similarity=0.309 Sum_probs=201.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+.+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s------------ 491 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS------------ 491 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE------------
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe------------
Confidence 46889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~--~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|++|++||.......... .+|.+.|.+++|+|++ ..+++|+.|++|++||++++++..
T Consensus 492 ----------------~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~ 555 (694)
T 3dm0_A 492 ----------------RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 555 (694)
T ss_dssp ----------------TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred ----------------CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999998765443332 4689999999999986 689999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 158 ~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+.+|.+.|++++|+|++.+|+||+.||+|++||+++++....+..+ ..+.++.. +|- ..+..+..++.|++||
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~----~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCF-SPN----RYWLCAATEHGIKIWD 629 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEE-CSS----SSEEEEEETTEEEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEEEE-cCC----CcEEEEEcCCCEEEEE
Confidence 99999999999999999999999999999999999999887766543 33333221 111 1133344567799999
Q ss_pred CC-CcceeeecC--------------------CcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 238 RK-MEPLCNIHE--------------------NTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 238 ~~-~~~~~~~~~--------------------~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.. ...+..+.. ...+.+++|+|+|.+|++|+.|+.+.+|+.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 43 333332221 123788999999999999999999999874
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=274.33 Aligned_cols=244 Identities=16% Similarity=0.244 Sum_probs=194.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-----------ccccccccc------------cCeEEEEEeCCC-
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-----------LLEKFDEHE------------GPVRGICFHNQQ- 63 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-----------~l~~~~~h~------------~~V~~i~fsp~~- 63 (641)
|.+.|++++|+|+|++||+|+.||.|++||+.+++ ....+.+|. ++|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 57899999999999999999999999999998776 477788898 899999999998
Q ss_pred -CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeE----------------------------
Q psy9327 64 -PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI---------------------------- 114 (641)
Q Consensus 64 -~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~---------------------------- 114 (641)
..+++++ .|++|++||+.++...
T Consensus 107 ~~~l~s~s----------------------------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (447)
T 3dw8_B 107 AAQFLLST----------------------------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFR 158 (447)
T ss_dssp SSEEEEEE----------------------------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEE
T ss_pred cceEEEeC----------------------------CCCeEEEEecccccCCcceecccCccccccCcccccceEecccc
Confidence 7899997 9999999999765432
Q ss_pred -----------EE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-CeeEEE-------EccCCCCEEEEEEecC
Q psy9327 115 -----------FT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNCICV-------LTGHNHYVMCAQFHPT 174 (641)
Q Consensus 115 -----------~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~~~i~~-------l~~h~~~V~sl~fsp~ 174 (641)
.. ..+|.+.|.+++|+|++.+|++| .|++|++||+++ ++++.. +.+|...|++++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 159 PMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp EEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred chheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCC
Confidence 13 36799999999999999999998 799999999984 445542 5689999999999999
Q ss_pred C-CEEEEEeCCCeEEEEecCCCce----eeeccCCCc------------eeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 175 D-DIVVSASLDQTIRVWDISGLRK----KNVAPGMGK------------LVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 175 g-~~lvSgs~DgtI~IWD~~~~~~----~~~~~~~~~------------~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
+ .++++|+.||+|++||+++++. ...+.++.. .+.++... |--. .+++++. +.|++||
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~---~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGR---YMMTRDY-LSVKVWD 312 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC-TTSS---EEEEEES-SEEEEEE
T ss_pred CCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC-CCCC---EEEEeeC-CeEEEEe
Confidence 8 9999999999999999998876 566665543 44443321 1100 1556666 9999999
Q ss_pred CC--CcceeeecCCcc----------------eEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec
Q psy9327 238 RK--MEPLCNIHENTR----------------VKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT 285 (641)
Q Consensus 238 ~~--~~~~~~~~~~~~----------------I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~ 285 (641)
.+ ...+..+..... +.+++|+|+|.+|++++.++.+.+|+..++....
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred CCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 43 555555544332 3349999999999999999999999988776543
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.6e-28 Score=268.05 Aligned_cols=279 Identities=19% Similarity=0.304 Sum_probs=233.9
Q ss_pred eeeccCCCCe-EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARV-KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V-~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+.+|.+.| .++.| +++++++|+.||+|++||+.+++.+..+.+|.++|.+++|+|++ .+++|+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s----------- 180 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS----------- 180 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-----------
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-----------
Confidence 4788999885 66665 56799999999999999999999999999999999999999988 888887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEc--cCCCEEEEEeCCCeEEEEECCCCe-----
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH--HEYPWILSASDDQTIRIWYWQSRN----- 154 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fs--p~~~~l~sgs~Dg~I~vWd~~~~~----- 154 (641)
.||+|++||+++++++..+.+|.+.|.+++|+ ++++++++|+.|++|++||++++.
T Consensus 181 -----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 181 -----------------TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp -----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred -----------------CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 99999999999999999999999999999999 577899999999999999998765
Q ss_pred ------------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCC
Q psy9327 155 ------------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 155 ------------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~ 216 (641)
.+..+.+|...|.++ ++++..+++|+.|++|++||+++++....+.+|...+.++.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence 356788999999887 567999999999999999999999999988888777766442211
Q ss_pred ceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc----ccc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL----DLP 289 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~----d~p 289 (641)
...+++++.|+.|++|| .++..+..+. +...|.+++|+ +.++++++.|+.+.+|+..++... .. ...
T Consensus 322 ----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 395 (464)
T 3v7d_B 322 ----RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSA 395 (464)
T ss_dssp ----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCC
T ss_pred ----CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCcc
Confidence 01267888999999999 5566666664 47889999998 479999999999999998776432 11 122
Q ss_pred eEEEEEcCcEEEEEeCCCCeEEEEeCCcchhh
Q psy9327 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKF 321 (641)
Q Consensus 290 ~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~ 321 (641)
...+..++..+++++ ||.+++|++.+++...
T Consensus 396 ~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 445677888888888 8999999999876653
No 63
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.5e-29 Score=260.39 Aligned_cols=209 Identities=13% Similarity=0.163 Sum_probs=175.5
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccCeEEEEEeC--CCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~ 75 (641)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~----- 78 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS----- 78 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-----
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-----
Confidence 3567899999999999999999999999999999999876 45667788999999999999 699999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEccCCCCeEEEEEccC--CCEEEEEeCCCe
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLLGHLDYIRTTFFHHE--YPWILSASDDQT 144 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~ 144 (641)
.|+.|++||++++ +++..+.+|.+.|.+++|+|+ +.++++++.|+.
T Consensus 79 -----------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 79 -----------------------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp -----------------------TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE
T ss_pred -----------------------CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc
Confidence 9999999999987 678889999999999999999 999999999999
Q ss_pred EEEEECCCCeeEEEEc-------------cCCCCEEEEEEecC---CCEEEEEeCCCeEEEEecCCCce--eeeccCCCc
Q psy9327 145 IRIWYWQSRNCICVLT-------------GHNHYVMCAQFHPT---DDIVVSASLDQTIRVWDISGLRK--KNVAPGMGK 206 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~-------------~h~~~V~sl~fsp~---g~~lvSgs~DgtI~IWD~~~~~~--~~~~~~~~~ 206 (641)
|++||+++++++..+. +|...+.++.|+|+ +..+++++.|+.+.+|+...++. ...+.+|..
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc
Confidence 9999998876443322 68889999999997 89999999999998888877765 566677777
Q ss_pred eeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 207 LVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 207 ~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
.+.++.....--.....+++++.|+.|++||.
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 77765432211000012778889999999993
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=7.4e-29 Score=266.52 Aligned_cols=279 Identities=15% Similarity=0.152 Sum_probs=221.7
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
++.| ..+....|+|++++|++|+.||.|++||+.+++....+..|.++|.+++|+|++.+|++|+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------------- 158 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS-------------- 158 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE--------------
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe--------------
Confidence 3444 4455567899999999999999999999999998888889999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc---
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG--- 161 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~--- 161 (641)
.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||+++++++..+..
T Consensus 159 --------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 224 (420)
T 3vl1_A 159 --------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN 224 (420)
T ss_dssp --------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB
T ss_pred --------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCEEEEE---------------------EecCCCEEEEEeCCCeEEEEecCCCceeeeccC-CCceeeecccCCCcee
Q psy9327 162 HNHYVMCAQ---------------------FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG-MGKLVLSMKSKHPIWK 219 (641)
Q Consensus 162 h~~~V~sl~---------------------fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~-~~~~v~s~~~~~~v~~ 219 (641)
|...|.+++ |+|++.++++|+.||.|++||+++++....+.. +...+.++..... -.
T Consensus 225 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 303 (420)
T 3vl1_A 225 PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGN-NA 303 (420)
T ss_dssp TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSS-CT
T ss_pred CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCC-CC
Confidence 444555555 578899999999999999999999887766653 4555555442211 00
Q ss_pred eeeeeeeeCCCeeEEEecCC-Cc-ceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----eEeccccc--
Q psy9327 220 YCKPVKYCNPKHTLHICNRK-ME-PLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG----IIRTLDLP-- 289 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d~~-~~-~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g----~I~~~d~p-- 289 (641)
..+++++.++.|++||.+ .. .+..+. +...+.++.|. ++.++++++.|+.+.+|+..+. .+.....+
T Consensus 304 --~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 380 (420)
T 3vl1_A 304 --NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTF 380 (420)
T ss_dssp --TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEE
T ss_pred --CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccE
Confidence 026788899999999943 32 244443 56778888665 6789999999999999985442 11111111
Q ss_pred ---------eEEEEEcCc---EEEEEeCCCCeEEEEeCC
Q psy9327 290 ---------IYITKIKGN---QVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 290 ---------~~~~~~~g~---~v~~~~~dg~i~v~~~~~ 316 (641)
...+..++. .+++.+.+|.+.+|++.+
T Consensus 381 ~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 381 LVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 223556666 788999999999998764
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.8e-29 Score=265.51 Aligned_cols=277 Identities=13% Similarity=0.132 Sum_probs=225.5
Q ss_pred ccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEEC----ccCc------ccccccc----------cccCeEEEEEeCCCC
Q psy9327 6 ETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDY----RMNT------LLEKFDE----------HEGPVRGICFHNQQP 64 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~----~~~~------~l~~~~~----------h~~~V~~i~fsp~~~ 64 (641)
..|.+.|++++|+|+++ +|++|+.||.|++||+ .+++ ....+.. |.+.|.+++|+|++.
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 8777 3444433 688999999999999
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~ 144 (641)
+|++|+ .|+.|++|| .+++.+..+.+|.+.|.+++|+|++++|++++.|+.
T Consensus 122 ~l~~~~----------------------------~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (425)
T 1r5m_A 122 SIVTGV----------------------------ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENV 172 (425)
T ss_dssp EEEEEE----------------------------TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEEe----------------------------CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCe
Confidence 999998 999999999 678889999999999999999999999999999999
Q ss_pred EEEEECCCCeeEEEEccCCCC---------------EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceee
Q psy9327 145 IRIWYWQSRNCICVLTGHNHY---------------VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~---------------V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~ 209 (641)
|++||+.+++.+..+..|... +.+++|+|++ .+++++.|+.|++||+++++....+.++...+.
T Consensus 173 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 173 TILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp EEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred EEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999999999999999888877 9999999975 588999999999999999988888877776666
Q ss_pred ecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cc
Q psy9327 210 SMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TL 286 (641)
Q Consensus 210 s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~ 286 (641)
++..... - ..+++++.++.|++|| ........+. +...|.+++|+|++ .+++++.++.+.+|+..++... .+
T Consensus 252 ~~~~~~~-~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 252 VLEFNDT-N---KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp EEEEETT-T---TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEECCC-C---CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 5442211 0 1266778999999999 4455555554 57899999999999 9999999999999998776532 22
Q ss_pred ---ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 287 ---DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 287 ---d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.. +..++..+++++.||.+++|++.+.
T Consensus 327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 233333 4456889999999999999998753
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4e-28 Score=251.42 Aligned_cols=237 Identities=14% Similarity=0.164 Sum_probs=206.7
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+|.+.|.+++|+|+++++++|+.||.|++||+.+++ ....+..|...|.+++|+|++.++++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------------- 160 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------------- 160 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE--------------
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe--------------
Confidence 799999999999999999999999999999999877 5667778999999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.|+.|++||+++++.+..+.+|.+.|.+++|+|+++++++++.|+.|++||+++++.+..+. |..
T Consensus 161 --------------~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~ 225 (337)
T 1gxr_A 161 --------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS 225 (337)
T ss_dssp --------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred --------------CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC
Confidence 99999999999999999999999999999999999999999999999999999999888775 788
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
.+.+++|+|++..+++++.|+.|++||+++.+.. .+..+...+.++... |-- ..+++++.++.+++|| .....+
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA-YCG---KWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC-TTS---SEEEEEETTSEEEEEETTTCCEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEEC-CCC---CEEEEecCCCcEEEEECCCCeEE
Confidence 9999999999999999999999999999987654 344555555543322 111 1166778899999999 555566
Q ss_pred eeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
....+...+.+++|+|++.++++++.++.+.+|+
T Consensus 301 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 301 FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 6666788999999999999999999888888885
No 67
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=9.3e-28 Score=261.15 Aligned_cols=276 Identities=21% Similarity=0.325 Sum_probs=234.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
...+.+|.+.|.. +++++|+++++|+.||+|++||+.+++.+..+.+|.++|.+++|+ +..+++|+
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~----------- 176 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS----------- 176 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEE-----------
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEe-----------
Confidence 3568899987643 355578999999999999999999999999999999999999998 56899987
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++.+.++.+|.+.|.+++|+ +..+++|+.|++|++||+.+++++..+.+
T Consensus 177 -----------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 177 -----------------TDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp -----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC
T ss_pred -----------------CCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 99999999999999999999999999999996 56799999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
|...|.++.| ++..+++|+.||+|++||+++++....+.++...+.++..... .+++++.|+.|++|| ...
T Consensus 238 ~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 238 HVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI------HVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSS------EEEEEETTSCEEEEETTTC
T ss_pred CcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCC------EEEEEeCCCeEEEEECCCC
Confidence 9999999999 7889999999999999999999999988888777776554221 267788999999999 455
Q ss_pred cceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc------cceEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 241 EPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD------LPIYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 241 ~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d------~p~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
..+..+. +...+.+++++ +.++++++.++.+.+|+..++. +..+. .++.....++..+++++.||.+++|
T Consensus 310 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 310 NCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387 (445)
T ss_dssp CEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred CEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEE
Confidence 5555554 35677777775 5699999999999999987664 44433 3455566678999999999999999
Q ss_pred EeCCcchh
Q psy9327 313 RIDPTEFK 320 (641)
Q Consensus 313 ~~~~~~~~ 320 (641)
++.+++..
T Consensus 388 d~~~~~~~ 395 (445)
T 2ovr_B 388 DLKTGEFI 395 (445)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcee
Confidence 99876644
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.2e-28 Score=267.66 Aligned_cols=270 Identities=20% Similarity=0.288 Sum_probs=225.4
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+|...|.+++| +++++++|+.||+|++||..+++.+..+.+|.++|.+++| ++.++++|+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~--------------- 190 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGS--------------- 190 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEE---------------
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEc---------------
Confidence 356677998877 7899999999999999999999999999999999999999 788999998
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE---EEEccC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI---CVLTGH 162 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i---~~l~~h 162 (641)
.||+|++||+.+++.+.++.+|.+.|.+++|++ ..+++|+.|++|++||+++++.. ..+.+|
T Consensus 191 -------------~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 191 -------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp -------------TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred -------------CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCC
Confidence 999999999999999999999999999999974 58999999999999999987654 678899
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
...|.+++| ++..+++|+.||+|++||+++++....+.++...+.++..... .+++++.|+.|++|| ..+.
T Consensus 256 ~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 256 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR------LVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT------EEEEEETTSCEEEEETTTCC
T ss_pred CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCC------EEEEEeCCCeEEEEECCCCC
Confidence 999999999 6899999999999999999999999998888777776554221 267888999999999 4566
Q ss_pred ceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC----------eEecc---ccceEEEEEcCcEEEEEeCCC
Q psy9327 242 PLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG----------IIRTL---DLPIYITKIKGNQVYYLDREC 307 (641)
Q Consensus 242 ~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g----------~I~~~---d~p~~~~~~~g~~v~~~~~dg 307 (641)
.+..+. +...|.+++| ++.++++++.++.+.+|+...+ .+..+ ..++.....++..+++++.||
T Consensus 328 ~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg 405 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 405 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSS
T ss_pred EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCC
Confidence 666665 4778999999 5779999999999999985433 23322 233444445888999999999
Q ss_pred CeEEEEeCCcch
Q psy9327 308 SPHVLRIDPTEF 319 (641)
Q Consensus 308 ~i~v~~~~~~~~ 319 (641)
.+++|++.+..-
T Consensus 406 ~i~iwd~~~~~~ 417 (435)
T 1p22_A 406 TILIWDFLNDPA 417 (435)
T ss_dssp EEEEEC------
T ss_pred EEEEEECCCCCC
Confidence 999999987543
No 69
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=8.3e-28 Score=261.55 Aligned_cols=272 Identities=22% Similarity=0.359 Sum_probs=233.6
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+ ++++++|+.||+|++||+.+++.+..+.+|..+|.+++|+ +..+++|+
T Consensus 152 ~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s----------- 216 (445)
T 2ovr_B 152 LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS----------- 216 (445)
T ss_dssp EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE-----------
T ss_pred EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEe-----------
Confidence 46788999999999998 5699999999999999999999999999999999999996 45788887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.|++|++||+.+++.+..+.+|.+.|.+++| ++.++++|+.|+.|++||+++++++..+.+
T Consensus 217 -----------------~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 277 (445)
T 2ovr_B 217 -----------------RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG 277 (445)
T ss_dssp -----------------TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC
T ss_pred -----------------CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC
Confidence 9999999999999999999999999999999 678899999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
|...|.++.| ++..+++|+.|++|++||+++++....+.++...+.++..... .+++++.|+.|++|| .++
T Consensus 278 ~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~------~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 278 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN------ILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETT------EEEEEETTSCEEEEETTTC
T ss_pred CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCC------EEEEEeCCCeEEEEECCCC
Confidence 9999999999 7899999999999999999999999888887776665443222 267788999999999 456
Q ss_pred cceeeec----CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eecc--------ccceEE--EEEcCcEEEEEeC
Q psy9327 241 EPLCNIH----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTL--------DLPIYI--TKIKGNQVYYLDR 305 (641)
Q Consensus 241 ~~~~~~~----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~--------d~p~~~--~~~~g~~v~~~~~ 305 (641)
..+..+. +...|.+++|+ +.++++++.++.+.+|+..++. ++.+ ..++.. +..++..+++++.
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred cEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc
Confidence 6666665 56789999997 4699999999999999987764 3333 122332 3456677889999
Q ss_pred CCC----eEEEEeCCc
Q psy9327 306 ECS----PHVLRIDPT 317 (641)
Q Consensus 306 dg~----i~v~~~~~~ 317 (641)
||. +.+|+++..
T Consensus 428 dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 428 NGTEETKLLVLDFDVD 443 (445)
T ss_dssp SSSSCCEEEEEECCCC
T ss_pred CCCCccEEEEEECCCC
Confidence 998 999998863
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=7e-29 Score=260.23 Aligned_cols=239 Identities=13% Similarity=0.260 Sum_probs=196.9
Q ss_pred CCCCeEEEEEccC----CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|.+.|.+++|+|+ +++|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++.+|++|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~------------ 135 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS------------ 135 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE------------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe------------
Confidence 6688999999999 67999999999999999999999999999999999999999 899999998
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|++||+++++.+..+ .+|.+.|.+++|+|++.+|++|+.|+.|++||+++++....+
T Consensus 136 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 136 ----------------KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp ----------------TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred ----------------CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 9999999999999999998 789999999999999999999999999999999987544333
Q ss_pred ----------------------------ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce--------------
Q psy9327 160 ----------------------------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-------------- 197 (641)
Q Consensus 160 ----------------------------~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-------------- 197 (641)
.+|...|.+++|+ +.++++++.|+.|++||++++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 3499999999999 78999999999999999988754
Q ss_pred eeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Ccc----eeeecC---CcceEEEEEcCCccEEEEecC
Q psy9327 198 KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEP----LCNIHE---NTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 198 ~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~----~~~~~~---~~~I~sla~~p~g~~L~t~s~ 269 (641)
...+.++...+.++... |-. -...+++++.++.|++||.. ... ...+.. ...|.+++|+|++.+|++++.
T Consensus 278 ~~~~~~~~~~v~~~~~s-~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 278 LGRFDYSQCDIWYMRFS-MDF-WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp EEEEECSSCCSSCCCCE-ECT-TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eccccccCCcEEEEEEc-CCC-CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 33333333333322211 000 01126788899999999943 322 223332 589999999999999999999
Q ss_pred CeEEEEEcC
Q psy9327 270 HIKYAIVNG 278 (641)
Q Consensus 270 ~~k~~l~~~ 278 (641)
++.+.+|+.
T Consensus 356 dg~i~iwd~ 364 (366)
T 3k26_A 356 DASIWRWDR 364 (366)
T ss_dssp TSEEEEEEC
T ss_pred CCEEEEEEe
Confidence 999999874
No 71
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=6e-28 Score=250.97 Aligned_cols=247 Identities=18% Similarity=0.283 Sum_probs=207.7
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
++.+++|.+.|.+++|+|++++|++|+.||.|++|+...+........+...+..+.+++++.++++++
T Consensus 79 ~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s----------- 147 (340)
T 4aow_A 79 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS----------- 147 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-----------
T ss_pred eEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec-----------
Confidence 356889999999999999999999999999999999999888888888999999999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCC--CEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~--~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.+++||...... .....+|.+.+..++|++++ .++++++.|+.|++||+++++++..
T Consensus 148 -----------------~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 148 -----------------RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp -----------------TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -----------------CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 999999999987654 34467799999999999864 5789999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|.+.|++++|+|++++|++|+.|++|++||+++.+....+.++. .+.++.. +| ...+.+++.++.|++||.
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~-~~----~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCF-SP----NRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEEEE-CS----SSSEEEEEETTEEEEEET
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEeeec-CC----CCceeeccCCCEEEEEEC
Confidence 99999999999999999999999999999999999998887776542 3333221 11 112556668999999994
Q ss_pred CC-cceeee----------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 239 KM-EPLCNI----------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~~-~~~~~~----------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
+. ..+..+ .+...|.+++|+|+|.+|++|+.|+.+.+|+..+|+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 43 222222 246789999999999999999999999999876664
No 72
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=9.9e-29 Score=263.21 Aligned_cols=247 Identities=9% Similarity=0.080 Sum_probs=209.8
Q ss_pred ceeeccCCCCeEEEEEccC----C---CeEEEEeCCCcEEEEECccCcc-----ccccccc-----ccCeEEEEEe----
Q psy9327 2 LTKFETKSARVKGLSFHPK----R---PWILSSLHNGVIQLWDYRMNTL-----LEKFDEH-----EGPVRGICFH---- 60 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd----g---~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h-----~~~V~~i~fs---- 60 (641)
+..+.+|.+.|.+++|+|+ + .+|++|+.||.|++||+.+++. +..+..| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 4678899999999999999 9 9999999999999999999887 7888888 6999999999
Q ss_pred CCCCE-EEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------CeeEE-----EE-------ccCC
Q psy9327 61 NQQPI-FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------RKCIF-----TL-------LGHL 121 (641)
Q Consensus 61 p~~~~-l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------~~~~~-----~~-------~~h~ 121 (641)
|++.+ |++++ .|+.|++||+.+ ++.+. .+ ..|.
T Consensus 135 ~~~~~~l~~~~----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (397)
T 1sq9_A 135 RLLSHRLVATD----------------------------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 186 (397)
T ss_dssp ---CEEEEEEE----------------------------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEEe----------------------------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCC
Confidence 99999 99997 999999999998 66655 67 4589
Q ss_pred CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc---C---CCCEEEEEEecCCCEEEEEeCC---CeEEEEec
Q psy9327 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG---H---NHYVMCAQFHPTDDIVVSASLD---QTIRVWDI 192 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~---h---~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~ 192 (641)
..|.+++|+|++ ++++|+.|+.|++||+++++++..+.+ | ...|.+++|+|++.+|++++.| +.|++||+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 999999999999 999999999999999999999999998 9 9999999999999999999999 99999999
Q ss_pred CCCceeeeccC-------------CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec-------C---
Q psy9327 193 SGLRKKNVAPG-------------MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH-------E--- 248 (641)
Q Consensus 193 ~~~~~~~~~~~-------------~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~-------~--- 248 (641)
++++....+.+ +...+.++... |-- ..+++++.++.|++|| .....+..+. +
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSG---ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED 341 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEEC-SSS---SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEEC-CCC---CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence 99988888876 55555554322 111 1267888999999999 4566666665 3
Q ss_pred ------------CcceEEEEEcCCc----------cEEEEecCCeEEEEEcCCCC
Q psy9327 249 ------------NTRVKSGAWDESG----------VFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 249 ------------~~~I~sla~~p~g----------~~L~t~s~~~k~~l~~~~~g 281 (641)
...|.+++|+|+| .++++++.++.+.+|+.++|
T Consensus 342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 6889999999998 78999998888888876554
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-29 Score=267.91 Aligned_cols=280 Identities=10% Similarity=0.159 Sum_probs=225.7
Q ss_pred CCCCeEEEEEccCCC-eEEEE----------eCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCCEEEEeceee
Q psy9327 8 KSARVKGLSFHPKRP-WILSS----------LHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73 (641)
Q Consensus 8 H~~~V~~l~fspdg~-~Lasg----------~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~ 73 (641)
+..+|.+++|+|+++ ++++| +.||.|++||+.+++ .+..+ .|..+|.+++|+|++.+|++|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~--- 86 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGAL--- 86 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEE---
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEc---
Confidence 345789999999987 89999 889999999998875 33334 5899999999999999999998
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC----CeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIW 148 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vW 148 (641)
.|+.|++||+.+ .+.+..+.+|.+.|.+++|+|+ +.+|++++.|+.|++|
T Consensus 87 -------------------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 87 -------------------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp -------------------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred -------------------------cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 899999999988 4588899999999999999998 8899999999999999
Q ss_pred ECCCCe------eEEE---EccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCC------Cceeeecc
Q psy9327 149 YWQSRN------CICV---LTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGM------GKLVLSMK 212 (641)
Q Consensus 149 d~~~~~------~i~~---l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~------~~~v~s~~ 212 (641)
|+.+++ .... +.+|...|.+++|+|+ +.++++++.|++|++||+++++....+..+ ...+.++.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 999876 3333 3679999999999999 789999999999999999999888777654 44455433
Q ss_pred cCCCceeeeeeeeeeCCCe---eEEEecCCC--cceeeec--CCcceEEEEEcC-CccEEEEecCCeEEEEEcCCCCe-E
Q psy9327 213 SKHPIWKYCKPVKYCNPKH---TLHICNRKM--EPLCNIH--ENTRVKSGAWDE-SGVFIYTTSNHIKYAIVNGDHGI-I 283 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~---~I~i~d~~~--~~~~~~~--~~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~~~g~-I 283 (641)
.. |-- ...+++++.++ .|++||.+. .....+. +...|.+++|+| ++.++++++.++.+.+|+.+++. +
T Consensus 222 ~~-~~~--~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WH-PKN--STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp EC-SSC--TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred EC-CCC--CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 22 110 01156677777 999999432 4555554 678999999999 89999999999999999987664 3
Q ss_pred ecc---ccceE--EEEEcC-cEEEEEeCCCCeEEEEeCCcch
Q psy9327 284 RTL---DLPIY--ITKIKG-NQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 284 ~~~---d~p~~--~~~~~g-~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
..+ ..++. .+..++ ..+++++.|+.+++|++.....
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 333 22222 244555 7899999999999999987543
No 74
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=7.5e-28 Score=271.08 Aligned_cols=279 Identities=12% Similarity=0.124 Sum_probs=238.5
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC----cccccccccccC-eEEEEEeC--CCCEEEEeceeeEEeee
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGP-VRGICFHN--QQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~-V~~i~fsp--~~~~l~sgs~~~~~~~~ 78 (641)
..|.+.|.+++|+|+|++|++++ ++.|++||+.++ +....+.+|.+. |.+++|+| ++.+|++|+
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-------- 85 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-------- 85 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE--------
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec--------
Confidence 36889999999999999999998 789999999998 888999999999 99999999 999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCC--------eeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--------KCIFTLLGHLDYIRTTFFHHEYPWILSASDD----QTIR 146 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--------~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g~I~ 146 (641)
.|+.|++||+.++ +....+..|.++|.+++|+|+++++++++.| +.|+
T Consensus 86 --------------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 86 --------------------ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp --------------------TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEE
T ss_pred --------------------CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEE
Confidence 9999999999755 7788889999999999999999999999988 6888
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccCCCc---eeeecccCCCc-eeee
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGK---LVLSMKSKHPI-WKYC 221 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~---~v~s~~~~~~v-~~~~ 221 (641)
+|| .++.+..+.+|...|.+++|+|+++ .+++++.|++|++||+.+++....+.+|.. .+.++... |- -
T Consensus 146 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--- 219 (615)
T 1pgu_A 146 SWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS-PDSG--- 219 (615)
T ss_dssp ETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC-STTC---
T ss_pred EEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC-CCCC---
Confidence 887 6778889999999999999999997 899999999999999999999998888776 67664432 21 1
Q ss_pred eeeeeeCCCeeEEEec-CCCcceeee-----cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccccc-----
Q psy9327 222 KPVKYCNPKHTLHICN-RKMEPLCNI-----HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDLP----- 289 (641)
Q Consensus 222 ~~l~s~~~d~~I~i~d-~~~~~~~~~-----~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~p----- 289 (641)
..+++++.++.|++|| .....+..+ .+...|.+++|+ ++.++++++.++.+.+|+..++. +..+..+
T Consensus 220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 298 (615)
T 1pgu_A 220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 298 (615)
T ss_dssp CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG
T ss_pred CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc
Confidence 1266778999999999 566777777 568899999999 99999999999999999988765 3333221
Q ss_pred ---eEEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 290 ---IYITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 290 ---~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
......++..+++++.||.+++|++...+..
T Consensus 299 ~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 299 NQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp GCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE
T ss_pred CceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE
Confidence 2223348899999999999999998865443
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.7e-28 Score=261.79 Aligned_cols=248 Identities=14% Similarity=0.146 Sum_probs=199.6
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCC-CEEEEeceee
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQ-PIFVSGGKMI 73 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~-~~l~sgs~~~ 73 (641)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+.+|...|.+++|+|++ .++++++
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~--- 151 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG--- 151 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE---
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc---
Confidence 45789999999999999 9999999999999999999887 5677888999999999999998 6899987
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.|+.|++||+++++.+..+ .+|.+.|.+++|+|++.+|++++.|+.|++||++
T Consensus 152 -------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 152 -------------------------CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp -------------------------TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred -------------------------CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 9999999999999999999 8899999999999999999999999999999999
Q ss_pred CCeeEEEE-ccCCCC-EEEEEEecCCCEEEEE---eCCCeEEEEecCCCce-eeecc-CCCceeeecccCCCceeeeeee
Q psy9327 152 SRNCICVL-TGHNHY-VMCAQFHPTDDIVVSA---SLDQTIRVWDISGLRK-KNVAP-GMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 152 ~~~~i~~l-~~h~~~-V~sl~fsp~g~~lvSg---s~DgtI~IWD~~~~~~-~~~~~-~~~~~v~s~~~~~~v~~~~~~l 224 (641)
+++++..+ .+|.+. +.++.|+|++.++++| +.|+.|++||+++++. ..... .+...+.++... |--. .-+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~--~l~ 283 (402)
T 2aq5_A 207 KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD-PDTN--IVY 283 (402)
T ss_dssp TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE-TTTT--EEE
T ss_pred CCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc-CCCC--EEE
Confidence 99999998 788876 8999999999999999 7999999999988664 22221 222233322111 0000 013
Q ss_pred eeeCCCeeEEEecC-CCc----ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 225 KYCNPKHTLHICNR-KME----PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 225 ~s~~~d~~I~i~d~-~~~----~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.+++.|+.|++||. ... .+..+.+...+.+++|+|++.+++++ ++.+.+|...++.+
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~--~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK--CEIARFYKLHERKC 345 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG--TEEEEEEEEETTEE
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec--ceeEEEEEcCCCcE
Confidence 45668999999993 333 23333456899999999999987653 44566666555443
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=4.9e-28 Score=257.47 Aligned_cols=241 Identities=15% Similarity=0.218 Sum_probs=196.2
Q ss_pred ccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 6 ETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 6 ~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+|.+.|.+++|+| ++++|++|+.||.|++||+.. ..+..+.. |...|.+++|+|++.+|++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------- 182 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD----------- 182 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-----------
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEEC-----------
Confidence 47999999999999 789999999999999999985 44455543 458899999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCC----CeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQS----RNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~----~~~i 156 (641)
.|+.|++||+ +++++..+.+|.+.|.+++|+|+++ ++++|+.|++|++||+++ +.++
T Consensus 183 -----------------~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 183 -----------------STGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp -----------------TTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred -----------------CCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 9999999999 5788899999999999999999999 999999999999999987 6677
Q ss_pred EEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeee----c-ccCCC---ceeeee----e
Q psy9327 157 CVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS----M-KSKHP---IWKYCK----P 223 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s----~-~~~~~---v~~~~~----~ 223 (641)
..+ +|...|.+++|+| ++.+|++++.|++|++||+++++....+.++...... + ...+| +..+.+ .
T Consensus 245 ~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~ 323 (383)
T 3ei3_B 245 AEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ 323 (383)
T ss_dssp EEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT
T ss_pred EEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc
Confidence 777 6999999999999 9999999999999999999988876666543211110 0 01111 111111 1
Q ss_pred eeeeCCCeeEEEec-CCCcceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
+ +++.++.|++|| ..+..+..+. +...+..++|+|+|.+|++++ ++.+.+|+.+
T Consensus 324 ~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 324 L-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp T-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred c-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 3 667899999999 5566666665 345677779999999999997 8889998764
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.6e-29 Score=275.89 Aligned_cols=280 Identities=9% Similarity=-0.011 Sum_probs=210.5
Q ss_pred eeccCCCCeEEEEEccC------CCeEEEEeCCCcEEEEECccCcc-----------cccccccccCeEEEEEeCCCCEE
Q psy9327 4 KFETKSARVKGLSFHPK------RPWILSSLHNGVIQLWDYRMNTL-----------LEKFDEHEGPVRGICFHNQQPIF 66 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspd------g~~Lasg~~dg~I~iWD~~~~~~-----------l~~~~~h~~~V~~i~fsp~~~~l 66 (641)
.+.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.+++. ...+.+|.++|.+++|+|++ .|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 46778899999999997 57999999999999999976642 23567899999999999865 78
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEE--EEccCC-CEEEEEeCC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTT--FFHHEY-PWILSASDD 142 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v--~fsp~~-~~l~sgs~D 142 (641)
++|+ .||+|++||++++ .+...+.+|.++|+++ +|+|++ .+|+|||.|
T Consensus 281 asgs----------------------------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 281 VCGF----------------------------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EEEE----------------------------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEe----------------------------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 8887 9999999999976 4566789999999999 577887 899999999
Q ss_pred CeEEEEECCCCeeEEEEccCCC--CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceee
Q psy9327 143 QTIRIWYWQSRNCICVLTGHNH--YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY 220 (641)
Q Consensus 143 g~I~vWd~~~~~~i~~l~~h~~--~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~ 220 (641)
++|++||+++++++.++.+|.. .|.+++|+|++..+++++.|++|++||++++.+..++.+|...|.++.. +|--.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~-Sp~g~- 410 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV-SRLHP- 410 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC-CSSCC-
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe-CCCCC-
Confidence 9999999999888777777764 5889999999999999999999999999999888888888888877543 33211
Q ss_pred eeeeeeeCCCeeEEEecCCCcceeee------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc---ccce-
Q psy9327 221 CKPVKYCNPKHTLHICNRKMEPLCNI------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL---DLPI- 290 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~~~~~~~~------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~---d~p~- 290 (641)
.+++|+.|++|++||.....+... .....+.+++|+|+|..+. ...+.++..|......+..+ ..++
T Consensus 411 --~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~~~~~~~~~~g~~~~~l~gh~~~V~ 487 (524)
T 2j04_B 411 --MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSSYEVYPLTVNDVSKAKIDAHGINIT 487 (524)
T ss_dssp --BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEE-ECCCCCCCC-------------CCCSCC
T ss_pred --eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEE-ccCCceecccccCCcceeeecCCCceEE
Confidence 267899999999999544333221 1223578999999988543 23222222221111111111 1122
Q ss_pred -EEEEEcC---cEEEEEeCCCCeEEEEeCCc
Q psy9327 291 -YITKIKG---NQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 291 -~~~~~~g---~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.++ ..+.+++.+|.+++|+++-.
T Consensus 488 ~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 488 CTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 2344553 48999999999999998753
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-28 Score=286.79 Aligned_cols=251 Identities=15% Similarity=0.221 Sum_probs=206.9
Q ss_pred CceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEeCC--CCEEEEeceeeEEe
Q psy9327 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFHNQ--QPIFVSGGKMIVMA 76 (641)
Q Consensus 1 ll~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fsp~--~~~l~sgs~~~~~~ 76 (641)
|+..+++|.+.|++++|+|++++|++|+.||+|++||+. +++.+..+.+|.++|.+++|+|+ +.++++|+
T Consensus 1 ~~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s------ 74 (753)
T 3jro_A 1 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------ 74 (753)
T ss_dssp -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE------
T ss_pred CeeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe------
Confidence 567899999999999999999999999999999999998 56778888999999999999988 99999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~ 152 (641)
.||.|++||+.+++ .+..+.+|.++|.+++|+|+ +..+++|+.|++|++||+++
T Consensus 75 ----------------------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 75 ----------------------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp ----------------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred ----------------------CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 99999999999987 77888999999999999999 99999999999999999988
Q ss_pred C--eeEEEEccCCCCEEEEEEec-------------CCCEEEEEeCCCeEEEEecCCC----ceeeeccCCCceeeeccc
Q psy9327 153 R--NCICVLTGHNHYVMCAQFHP-------------TDDIVVSASLDQTIRVWDISGL----RKKNVAPGMGKLVLSMKS 213 (641)
Q Consensus 153 ~--~~i~~l~~h~~~V~sl~fsp-------------~g~~lvSgs~DgtI~IWD~~~~----~~~~~~~~~~~~v~s~~~ 213 (641)
+ .....+.+|...|.+++|+| ++..+++|+.||+|++||++++ .....+.+|...+.++..
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 7 34556788999999999999 5899999999999999999877 445566777777777543
Q ss_pred CCCceeeeeeeeeeCCCeeEEEecCCCc-------ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 214 KHPIWKYCKPVKYCNPKHTLHICNRKME-------PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 214 ~~~v~~~~~~l~s~~~d~~I~i~d~~~~-------~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
. |-......+++++.|+.|++||.... ......+...|.+++|+|+|.++++++.++.+.+|+...
T Consensus 213 s-p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 213 S-PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp C-CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred c-cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 3 21000112678889999999993321 112223467899999999999999999999999998764
No 79
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=250.31 Aligned_cols=246 Identities=12% Similarity=0.130 Sum_probs=205.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+. |..+|.+++|+|++.++++++
T Consensus 67 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----------- 134 (369)
T 3zwl_B 67 LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAIL----------- 134 (369)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEE-----------
T ss_pred hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEec-----------
Confidence 46788999999999999999999999999999999999999888886 899999999999999999997
Q ss_pred eecccCCcceeeEEEeeCC-----CeEEEEECCCCe-----------eEEEEccCCC--CeEEEEEccCCCEEEEEeCCC
Q psy9327 82 LESRNEPCLFRIKSVLGDD-----YKIKVWNYKQRK-----------CIFTLLGHLD--YIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-----g~I~vWD~~t~~-----------~~~~~~~h~~--~V~~v~fsp~~~~l~sgs~Dg 143 (641)
.+ +.|++||+.++. ....+..|.+ .+.+++|+|+++++++++.|+
T Consensus 135 -----------------~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 135 -----------------DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp -----------------CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred -----------------CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 66 999999987653 3455666776 999999999999999999999
Q ss_pred eEEEEECCC-CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeee
Q psy9327 144 TIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 144 ~I~vWd~~~-~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
.|++||+++ .+.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++....+.. ...+.++.. +|.-.
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~-~~~~~--- 272 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET-DCPLNTAVI-TPLKE--- 272 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSCEEEEEE-CSSSS---
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC-CCCceeEEe-cCCCc---
Confidence 999999998 788999999999999999999999999999999999999999888777662 233332221 11111
Q ss_pred eeeeeCCCe--------------eEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC
Q psy9327 223 PVKYCNPKH--------------TLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 223 ~l~s~~~d~--------------~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g 281 (641)
.++++..++ .+.+|| .....+..+. +...|.+++|+|+|.+|++++.|+.+.+|+.+.+
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 033333333 799999 4455555554 4789999999999999999999999999986554
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=8.7e-28 Score=253.01 Aligned_cols=246 Identities=12% Similarity=0.058 Sum_probs=203.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccc--ccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~--~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++.... +..|...|.+++|+|++.++++++
T Consensus 45 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------- 115 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--------- 115 (372)
T ss_dssp EEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE---------
T ss_pred eeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe---------
Confidence 467889999999999999999999999999999999988864433 467999999999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCee---EEE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC-----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW----- 150 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~----- 150 (641)
.|+.|++||+++++. ... ..+|.+.|.+++|+|++.+|++|+.|+.|++||+
T Consensus 116 -------------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 116 -------------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 176 (372)
T ss_dssp -------------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTT
T ss_pred -------------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccc
Confidence 999999999988762 333 3678999999999999999999999999999995
Q ss_pred -------------CCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCc
Q psy9327 151 -------------QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 151 -------------~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
..++++..+.+|...|.+++|+|++.+|++++.|++|++||+++++....+..+...+.++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--- 253 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFI--- 253 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEE---
T ss_pred cccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEe---
Confidence 4678899999999999999999999999999999999999999999888888776666554321
Q ss_pred eeeeeeeeeeCCCeeEEEecCCC--cce---------------------------------------eee--cCCcceEE
Q psy9327 218 WKYCKPVKYCNPKHTLHICNRKM--EPL---------------------------------------CNI--HENTRVKS 254 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d~~~--~~~---------------------------------------~~~--~~~~~I~s 254 (641)
....+..++.++.+.+|+... ..+ ..+ .+...|.+
T Consensus 254 --~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 331 (372)
T 1k8k_C 254 --TESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQ 331 (372)
T ss_dssp --ETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEE
T ss_pred --cCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcce
Confidence 111133333899999999433 100 111 45779999
Q ss_pred EEEc-CCc---cEEEEecCCeEEEEEcCCC
Q psy9327 255 GAWD-ESG---VFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 255 la~~-p~g---~~L~t~s~~~k~~l~~~~~ 280 (641)
++|. ++| .++++++.|+.+.+|+.++
T Consensus 332 ~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 332 ISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 9976 666 9999999999999997544
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=7.6e-28 Score=250.72 Aligned_cols=268 Identities=9% Similarity=0.016 Sum_probs=214.3
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCC-EEEEeceeeEEeeec
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQG 79 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~~~~~~~ 79 (641)
...+|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+..|..+|.+++|+|++. ++++|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------- 76 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT--------- 76 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE---------
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc---------
Confidence 346899999999999999999999999999999998876 2455568999999999999999 999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEEC-CCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC----
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNY-KQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS---- 152 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~-~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~---- 152 (641)
.|+.|++||+ .+++. ..+.+ |.+.|.+++|+| +.++++++.|+.|++||+++
T Consensus 77 -------------------~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~ 135 (342)
T 1yfq_A 77 -------------------VQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp -------------------TTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTB
T ss_pred -------------------CCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccc
Confidence 9999999999 87764 77888 999999999999 99999999999999999987
Q ss_pred -----CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-Ccee--eeccCCCceeeecccCCC-ceeeeee
Q psy9327 153 -----RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKK--NVAPGMGKLVLSMKSKHP-IWKYCKP 223 (641)
Q Consensus 153 -----~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~--~~~~~~~~~v~s~~~~~~-v~~~~~~ 223 (641)
++++..+. |...|.+++|+|++ +++++.|+.|++||+++ +... .....+...+.++... | -- ..
T Consensus 136 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~---~~ 208 (342)
T 1yfq_A 136 VIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQ---EG 208 (342)
T ss_dssp CEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGG---CE
T ss_pred cccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCC---CE
Confidence 77666666 89999999999887 99999999999999998 5432 2233344455543322 1 11 12
Q ss_pred eeeeCCCeeEEEecCCC-------cceeeecC-C---------cceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eec
Q psy9327 224 VKYCNPKHTLHICNRKM-------EPLCNIHE-N---------TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRT 285 (641)
Q Consensus 224 l~s~~~d~~I~i~d~~~-------~~~~~~~~-~---------~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~ 285 (641)
+++++.++.+.+|+... .....+.. . ..|.+++|+|++.+|++++.++.+.+|+..++. +..
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 66778899999998322 44444432 2 389999999999999999999999999988775 334
Q ss_pred cc----cceEEEEEcCcEEEEEeCCCC
Q psy9327 286 LD----LPIYITKIKGNQVYYLDRECS 308 (641)
Q Consensus 286 ~d----~p~~~~~~~g~~v~~~~~dg~ 308 (641)
+. .++.....++..+++++.||.
T Consensus 289 ~~~~h~~~v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 289 FAKFNEDSVVKIACSDNILCLATSDDT 315 (342)
T ss_dssp CCCCSSSEEEEEEECSSEEEEEEECTH
T ss_pred hhcccCCCceEecCCCCeEEEEecCCc
Confidence 33 233333366777888887776
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=9.4e-29 Score=268.77 Aligned_cols=251 Identities=17% Similarity=0.177 Sum_probs=191.1
Q ss_pred eeeccCCCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccc--cccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 3 TKFETKSARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~--~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+.+|.+.|++|+|+| ++.+|++|+.||+|++||++++...... ..+...+.+++|+|++.+|++|+
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--------- 228 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD--------- 228 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC---------
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe---------
Confidence 35678999999999998 6889999999999999999866433222 23455788999999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEE-
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCIC- 157 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~- 157 (641)
.||.|++||++ ++.+.++.+|.+.|.+++|+|+++ ++++|+.|++|++||+++.+...
T Consensus 229 -------------------~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 229 -------------------NVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp -------------------SSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred -------------------CCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 99999999986 456778899999999999999876 78899999999999998866433
Q ss_pred --EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCcee----eec-ccCCC---ceeeee-----
Q psy9327 158 --VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV----LSM-KSKHP---IWKYCK----- 222 (641)
Q Consensus 158 --~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v----~s~-~~~~~---v~~~~~----- 222 (641)
...+|...|++++|+|+|.+|++++.||+|++||++++.....+..+.... ..+ ...+| ......
T Consensus 289 ~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 289 FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTT
T ss_pred EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCC
Confidence 335799999999999999999999999999999999988776665442111 000 01111 111111
Q ss_pred -eeeeeCCCeeEEEec-CCCcceeee--cCCcceEEE-EEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 223 -PVKYCNPKHTLHICN-RKMEPLCNI--HENTRVKSG-AWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 223 -~l~s~~~d~~I~i~d-~~~~~~~~~--~~~~~I~sl-a~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.+.++..++.|++|| ..+..+..+ .+...|.++ +|+|+|.+|++|+ ++.+.+|+.++|..
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred eEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 023344567899999 455555554 346677776 6999999999876 66899998877643
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=3.8e-27 Score=254.75 Aligned_cols=274 Identities=12% Similarity=0.153 Sum_probs=220.4
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
++.|+||++ ++||+|. |++|+|||..+|+.+..+. .|...|++++|+|++.+|++|+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs------------------- 166 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------------------- 166 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------------------
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------------------
Confidence 567999975 5777775 8999999999998776554 6788999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~~~V~s 168 (641)
.|++|++||+++++++..+.+|...+.+++++ +..+++|+.|+.+++||.... ..+.++.+|...+..
T Consensus 167 ---------~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~ 235 (420)
T 4gga_A 167 ---------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 235 (420)
T ss_dssp ---------TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ---------CCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceee
Confidence 99999999999999999999999999988775 578999999999999999864 466788999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCcee----eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcce
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKK----NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPL 243 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~----~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~ 243 (641)
+.|+|++..+++++.|+.+++||..+++.. .....+...|.++.. +|.-.......+|+.|+.|++|| .++...
T Consensus 236 ~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 236 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE-CTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee-CCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 999999999999999999999999876532 333444445544321 12111111234567899999999 667777
Q ss_pred eeecCCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-Eeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
..+.....+.++.|++++..+++++ .++.+.+|+..++. +..+. .++.. +..+|..|++++.|+++++|++.
T Consensus 315 ~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 315 SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred eeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 7888888999999999999888765 78999999877654 33432 23333 44678999999999999999987
Q ss_pred Ccc
Q psy9327 316 PTE 318 (641)
Q Consensus 316 ~~~ 318 (641)
+..
T Consensus 395 ~~~ 397 (420)
T 4gga_A 395 ELD 397 (420)
T ss_dssp CSS
T ss_pred CCC
Confidence 643
No 84
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-28 Score=261.50 Aligned_cols=202 Identities=11% Similarity=0.056 Sum_probs=163.1
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+..+.+|.+.|.+++|+|++++|++|+.||+|++||+.+++ ....+..|..+|.+++|+|++.+|++++
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------- 119 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-------- 119 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE--------
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe--------
Confidence 45788999999999999999999999999999999999877 5666778999999999999999999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCe---eEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECC---
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK---CIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--- 151 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~---~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--- 151 (641)
.|+.|++||+++++ ....+.+ |.+.|.+++|+|++.+|++|+.|++|++||+.
T Consensus 120 --------------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 120 --------------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp --------------------SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred --------------------cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 99999999999887 4778888 99999999999999999999999999999985
Q ss_pred ---------------CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce----eeeccCCCceeeecc
Q psy9327 152 ---------------SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK----KNVAPGMGKLVLSMK 212 (641)
Q Consensus 152 ---------------~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~----~~~~~~~~~~v~s~~ 212 (641)
.++++..+ +|...|++++|+|++.+|++++.|++|++||+++++. ...+.+|...+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLL 258 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEE
T ss_pred cCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEE
Confidence 35677777 8999999999999999999999999999999999887 677777766666543
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.. |-- ..+++++.++.+ +|+
T Consensus 259 ~s-~~~---~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 259 WA-NES---AIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp EE-ETT---EEEEEESSSSEE-EEC
T ss_pred Ec-CCC---CEEEEEcCCcEE-EEE
Confidence 21 110 114556555555 666
No 85
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=9.9e-27 Score=239.42 Aligned_cols=272 Identities=13% Similarity=0.146 Sum_probs=214.7
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
.++|+||+++ +||+| .|++|+|||+.+++.+..+. .|...|.+++|+|+++++++|+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs------------------- 86 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------------------- 86 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------------------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------------------
Confidence 4679999986 66666 58999999999998877664 6788999999999999999998
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC-eeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~-~~i~~l~~h~~~V~s 168 (641)
.|++|++||+++++++..+.+|...+.++.+ ++..+++|+.++.+++|+.... ..+..+.+|...+.+
T Consensus 87 ---------~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 87 ---------SSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 155 (318)
T ss_dssp ---------TTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred ---------CCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence 9999999999999999999999999876655 5678999999999999998865 466788999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeee----ccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcce
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNV----APGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPL 243 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~----~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~ 243 (641)
+.|++++..+++++.|++|++||+++++.... ...+...+.++.. .|.-.....+.+++.++.|++||. .....
T Consensus 156 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 156 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE-CTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe-cCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 99999999999999999999999988664322 2223333333221 111111122457788999999994 44555
Q ss_pred eeecCCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-Eeccc---cceEE--EEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 244 CNIHENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLD---LPIYI--TKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 244 ~~~~~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d---~p~~~--~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
........+..++|+|++..+++++ .++.+.+|+..++. +..+. .++.. +..++..+++++.||.+++|++.
T Consensus 235 ~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 235 SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 5566688899999999988887654 78999999977664 44442 23333 44578899999999999999886
Q ss_pred C
Q psy9327 316 P 316 (641)
Q Consensus 316 ~ 316 (641)
+
T Consensus 315 ~ 315 (318)
T 4ggc_A 315 E 315 (318)
T ss_dssp C
T ss_pred C
Confidence 5
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.6e-27 Score=289.94 Aligned_cols=290 Identities=19% Similarity=0.336 Sum_probs=231.5
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeC--CCCEEEEeceeeEEeeec
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~~~ 79 (641)
+.++.+|.+.|.+++|+|+++++++|+.||+|++||+.+++.+..+.+|.++|.+++|+| ++.++++|+
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~--------- 720 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS--------- 720 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE---------
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe---------
Confidence 467889999999999999999999999999999999999999999999999999999999 556888887
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|++||+.+++++.++.+|.+.|.+++|+|+++++++|+.|++|++||+++++....+
T Consensus 721 -------------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 721 -------------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp -------------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred -------------------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccccee
Confidence 9999999999999999999999999999999999999999999999999999876544332
Q ss_pred -------------------------------------------------------ccCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 160 -------------------------------------------------------TGHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 160 -------------------------------------------------------~~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
.+|...|.+++|+|++.++++++.|
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS
T ss_pred cccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC
Confidence 2788899999999999999999999
Q ss_pred CeEEEEecCCCceeeeccCCCceeeecccCCC--------------ceee------------------------------
Q psy9327 185 QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP--------------IWKY------------------------------ 220 (641)
Q Consensus 185 gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~--------------v~~~------------------------------ 220 (641)
|+|++||+.++.....+.+|...+.++..... +|+.
T Consensus 862 g~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1249)
T 3sfz_A 862 YCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVD 941 (1249)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEec
Confidence 99999999999988888887666655332110 1110
Q ss_pred --------------------------ee-----eeeeeCCCeeEEEec-CCCcceeeec-CCcceEEEEEcCCccEEEEe
Q psy9327 221 --------------------------CK-----PVKYCNPKHTLHICN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 221 --------------------------~~-----~l~s~~~d~~I~i~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~ 267 (641)
++ .+++++.++.+.+|| ........+. +...|.+++|+|+|.+++++
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 1021 (1249)
T 3sfz_A 942 NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISS 1021 (1249)
T ss_dssp SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEE
T ss_pred CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEE
Confidence 00 034555666777777 3333333332 46678888888888888888
Q ss_pred cCCeEEEEEcCCCCeEeccc---cceEE-EEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 268 SNHIKYAIVNGDHGIIRTLD---LPIYI-TKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 268 s~~~k~~l~~~~~g~I~~~d---~p~~~-~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
+.++.+.+|+..++...... .++.. ....+..+++++.||.+++|++.+++.
T Consensus 1022 ~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1022 SEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC
T ss_pred cCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce
Confidence 88888888887777654321 12222 122356788888999999998876553
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=9.4e-28 Score=257.53 Aligned_cols=274 Identities=14% Similarity=0.149 Sum_probs=212.7
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccC----cccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....++++|+...++ +|+.||.|++||+... +.+..+.+|.++|.+++|+| ++.+|++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-------------- 101 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS-------------- 101 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE--------------
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe--------------
Confidence 345688998876444 5788999999998654 34556778999999999999 899999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCC-------eeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQR-------KCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~-------~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.||+|++||+.++ +++..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+++++++
T Consensus 102 --------------~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 102 --------------EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp --------------TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE
T ss_pred --------------CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc
Confidence 9999999999988 6788999999999999999998 69999999999999999999999
Q ss_pred EEE--ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec-cCCCce-eeecccCCCceeeeeeeeee---CC
Q psy9327 157 CVL--TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA-PGMGKL-VLSMKSKHPIWKYCKPVKYC---NP 229 (641)
Q Consensus 157 ~~l--~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~-~~~~~~-v~s~~~~~~v~~~~~~l~s~---~~ 229 (641)
..+ .+|.+.|.+++|+|++..|++++.|++|++||+++++....+ .++... +.++.. +|--. .++++ +.
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~l~~g~~~~~ 243 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF-VSEGK---ILTTGFSRMS 243 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE-CSTTE---EEEEEECTTC
T ss_pred EEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE-cCCCc---EEEEeccCCC
Confidence 999 899999999999999999999999999999999999888777 555432 332221 11111 14555 68
Q ss_pred CeeEEEecCC-Ccc---eeeecCCcceEEEEEcCCccEEE-EecCCeEEEEEcCCCCe--Eecc---c--cceEE--EEE
Q psy9327 230 KHTLHICNRK-MEP---LCNIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVNGDHGI--IRTL---D--LPIYI--TKI 295 (641)
Q Consensus 230 d~~I~i~d~~-~~~---~~~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~~~~g~--I~~~---d--~p~~~--~~~ 295 (641)
++.|.+||.+ ... .....+...+.+++|+|++.+++ +++.++.+.+|+..++. +..+ . .++.. +..
T Consensus 244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp 323 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMP 323 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECC
T ss_pred CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEec
Confidence 9999999943 222 33344577899999999999997 55579999999877654 3322 1 22222 223
Q ss_pred cCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 296 KGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 296 ~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
++..+ ++.++.+++|++.+..
T Consensus 324 ~~~~~--~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 324 KRGLE--VNKCEIARFYKLHERK 344 (402)
T ss_dssp GGGSC--GGGTEEEEEEEEETTE
T ss_pred ccccc--eecceeEEEEEcCCCc
Confidence 33333 3466688999888644
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=4.1e-27 Score=252.75 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=201.9
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+ +..+++|+
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~----------------- 193 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGS----------------- 193 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEE-----------------
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEc-----------------
Confidence 88999999999999999999999999999999999999999999999999994 56899987
Q ss_pred CcceeeEEEeeCCCeEEEEECC-CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYK-QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~-t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
.|+.|++||++ .+..+..+.+|.+.|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|
T Consensus 194 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v 262 (401)
T 4aez_A 194 -----------RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAV 262 (401)
T ss_dssp -----------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCC
T ss_pred -----------CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceE
Confidence 99999999999 567788899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCC-CEEEEEe--CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeee--eCCCeeEEEecCCC-
Q psy9327 167 MCAQFHPTD-DIVVSAS--LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKY--CNPKHTLHICNRKM- 240 (641)
Q Consensus 167 ~sl~fsp~g-~~lvSgs--~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s--~~~d~~I~i~d~~~- 240 (641)
.+++|+|++ .++++++ .|+.|++||+++++....+.. +..+.++.. +|-.. .+++ |..++.+.+||...
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~-s~~~~---~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQVTSLIW-SPHSK---EIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEE-CSSSS---EEEEEECTTTCEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEEE-CCCCC---eEEEEeecCCCcEEEEecCCc
Confidence 999999976 5666765 799999999999888777753 334443322 11111 1333 56899999999332
Q ss_pred --cceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 241 --EPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 241 --~~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
.....+ .+...|.+++|+|+|.++++++.++.+.+|+..++..
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 222222 3578899999999999999999999999999876653
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=2.4e-27 Score=248.36 Aligned_cols=278 Identities=15% Similarity=0.224 Sum_probs=213.5
Q ss_pred ceeeccCCCCeEEEEEccC---CCeEEEEeCCCcEEEEECcc-Cccc-ccccccccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKSARVKGLSFHPK---RPWILSSLHNGVIQLWDYRM-NTLL-EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspd---g~~Lasg~~dg~I~iWD~~~-~~~l-~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+..+++|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+..|.++|.+++|+|++.+|++++
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------ 105 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS------ 105 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE------
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc------
Confidence 4567899999999999999 69999999999999999987 5444 67888999999999999999999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEE--ccCCCEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF--HHEYPWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~f--sp~~~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
.|+.|++||+++++.+. +.+|.+.|.+++| +|++.+|++|+.|+.|++||+++++
T Consensus 106 ----------------------~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 106 ----------------------CDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ----------------------TTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ----------------------CCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999999998776 5569999999999 8899999999999999999999999
Q ss_pred eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC----CCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 155 ~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
++..+..|. .+.++.+. +..+++++.|+.+++||++.......... +.....++..... +.. ..+++++.+
T Consensus 163 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~d 237 (368)
T 3mmy_A 163 PMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQ-NKP-TGFALGSIE 237 (368)
T ss_dssp CSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTT-SCE-EEEEEEETT
T ss_pred EEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCC-CCC-CeEEEecCC
Confidence 998888664 56666665 56889999999999999987644332211 1111111111111 000 116788899
Q ss_pred eeEEEecCCC----cceeeecCCc-------------ceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eeccc---cc
Q psy9327 231 HTLHICNRKM----EPLCNIHENT-------------RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLD---LP 289 (641)
Q Consensus 231 ~~I~i~d~~~----~~~~~~~~~~-------------~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d---~p 289 (641)
+.+++||.+. .....+.... .|.+++|+|++.+|++++.++.+.+|+.+++. +..+. .+
T Consensus 238 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 317 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQP 317 (368)
T ss_dssp SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSC
T ss_pred CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCC
Confidence 9999999443 2333333322 69999999999999999999999999988775 33432 22
Q ss_pred eEE--EEEcCcEEEEEeCCCCeEEEE
Q psy9327 290 IYI--TKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 290 ~~~--~~~~g~~v~~~~~dg~i~v~~ 313 (641)
+.. +..++..+++++.|+..+.|.
T Consensus 318 v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 318 ISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ceEEEECCCCCeEEEEeccccccccc
Confidence 322 445677777777776544443
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=6e-27 Score=253.21 Aligned_cols=244 Identities=15% Similarity=0.232 Sum_probs=202.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+++|.+.|++++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +..+++|+
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs------------- 206 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGS------------- 206 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE-------------
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEe-------------
Confidence 456788999999999999999999999999999999999999999999999998875 56888887
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~~ 158 (641)
.|+.+++||.... ..+.++.+|...+..+.|+|++.++++++.|+.|++||..+++ .+..
T Consensus 207 ---------------~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~ 271 (420)
T 4gga_A 207 ---------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 271 (420)
T ss_dssp ---------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE
T ss_pred ---------------CCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeee
Confidence 9999999998864 5677889999999999999999999999999999999998765 4567
Q ss_pred EccCCCCEEEEEEecCC-CEEEE--EeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 LTGHNHYVMCAQFHPTD-DIVVS--ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g-~~lvS--gs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...|...|.+++|+|.+ ..+++ |+.|++|++||+.+++....+..+.. +.++.....--.+ -..++..++.|++
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v~~~~~~~~~~~l--v~~sg~~d~~I~i 348 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKEL--ISGHGFAQNQLVI 348 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-EEEEEEETTTTEE--EEEECTTTCCEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-eeeeeecCCCCeE--EEEEecCCCEEEE
Confidence 78899999999999975 45555 45799999999999998887765433 2222211110000 0234558999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
|| .++.++..+. |...|.+++|+|+|.+|++++.|+.+.+|+..+
T Consensus 349 wd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99 5677777765 578999999999999999999999999998543
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=1.7e-27 Score=249.00 Aligned_cols=243 Identities=15% Similarity=0.193 Sum_probs=200.9
Q ss_pred ccCCCCeEEEEEccC---CCeEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEE------eCCCCEEEEeceeeEE
Q psy9327 6 ETKSARVKGLSFHPK---RPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICF------HNQQPIFVSGGKMIVM 75 (641)
Q Consensus 6 ~~H~~~V~~l~fspd---g~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~f------sp~~~~l~sgs~~~~~ 75 (641)
.+|.+.|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+..|.+.|.+++| +|++++|++++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~----- 136 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS----- 136 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-----
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe-----
Confidence 378999999999998 6999999999999999999888 88889999999999965 67899999998
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEccCCC----CeEEEE----EccCCCEEEEEeCCCeEE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLLGHLD----YIRTTF----FHHEYPWILSASDDQTIR 146 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~~h~~----~V~~v~----fsp~~~~l~sgs~Dg~I~ 146 (641)
.|+.|++||+++++ ++..+..|.+ .+.+++ |+|++.++++|+.|+.|+
T Consensus 137 -----------------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 137 -----------------------RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp -----------------------TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred -----------------------CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 99999999999987 7888877665 899998 788999999999999999
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEecCCCceeeecc-----CCCceeeecccCCCce
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHP---TDDIVVSASLDQTIRVWDISGLRKKNVAP-----GMGKLVLSMKSKHPIW 218 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp---~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-----~~~~~v~s~~~~~~v~ 218 (641)
+||++++++... ..|...|.+++|+| ++..+++++.||.|++||+++++....+. ++...+.++... |--
T Consensus 194 i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 271 (357)
T 3i2n_A 194 LFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL-PQN 271 (357)
T ss_dssp EEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE-TTE
T ss_pred EEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC-CCC
Confidence 999999987544 56899999999999 99999999999999999999877665554 666666654322 111
Q ss_pred eeeeeeeeeCCCeeEEEecCC-C-------------------cceeeec-CCcceEEEEEcCCccEEE-EecCCeEEEEE
Q psy9327 219 KYCKPVKYCNPKHTLHICNRK-M-------------------EPLCNIH-ENTRVKSGAWDESGVFIY-TTSNHIKYAIV 276 (641)
Q Consensus 219 ~~~~~l~s~~~d~~I~i~d~~-~-------------------~~~~~~~-~~~~I~sla~~p~g~~L~-t~s~~~k~~l~ 276 (641)
. ..+++++.++.|++||.+ . ..+..+. +...|.+++|+|+|.+++ +++.|+.+.+|
T Consensus 272 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw 349 (357)
T 3i2n_A 272 R--ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVL 349 (357)
T ss_dssp E--EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred C--cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEE
Confidence 1 026788899999999932 1 1233333 477899999999999998 78899999999
Q ss_pred cCCC
Q psy9327 277 NGDH 280 (641)
Q Consensus 277 ~~~~ 280 (641)
+..+
T Consensus 350 ~~~~ 353 (357)
T 3i2n_A 350 IVTK 353 (357)
T ss_dssp EECC
T ss_pred ECCC
Confidence 7654
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-27 Score=257.19 Aligned_cols=274 Identities=8% Similarity=0.059 Sum_probs=205.1
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECc---cCcccccccc------------cccCeEEEE--EeCCCCEEEEe
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYR---MNTLLEKFDE------------HEGPVRGIC--FHNQQPIFVSG 69 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~---~~~~l~~~~~------------h~~~V~~i~--fsp~~~~l~sg 69 (641)
+|.+.|++++|+|++++|++|+.||+|++||+. +++.+..+.. +...+.++. +++++.++++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 599999999999999999999999999999995 5554443332 445566666 45678888888
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc--CCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG--HLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~--h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
+ .|+.|++||+++++++.++.+ |.+.|++++|+|++.+|++|+.|++|++
T Consensus 189 ~----------------------------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 240 (437)
T 3gre_A 189 T----------------------------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDI 240 (437)
T ss_dssp E----------------------------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred e----------------------------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 7 999999999999999999998 8999999999999999999999999999
Q ss_pred EECCCCeeEEEEc-cCCCCEEEEEEec----CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc----------
Q psy9327 148 WYWQSRNCICVLT-GHNHYVMCAQFHP----TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK---------- 212 (641)
Q Consensus 148 Wd~~~~~~i~~l~-~h~~~V~sl~fsp----~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~---------- 212 (641)
||+++++++..+. +|...|++++|+| ++.++++|+.||+|++||+++++....+.++...+....
T Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 241 WDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp EETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred EEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 9999999999886 7888999996665 577999999999999999999998888876644333211
Q ss_pred -------cCCCceeeee----eeeeeCCCeeEEEec-CCCcceeeecC----CcceEEEEEcCCccEEEEe--c-CCeEE
Q psy9327 213 -------SKHPIWKYCK----PVKYCNPKHTLHICN-RKMEPLCNIHE----NTRVKSGAWDESGVFIYTT--S-NHIKY 273 (641)
Q Consensus 213 -------~~~~v~~~~~----~l~s~~~d~~I~i~d-~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~--s-~~~k~ 273 (641)
...+++.+++ .+++++.|+.|++|| .++.....+.. ...+....++++..+++.. . ....+
T Consensus 321 ~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSV 400 (437)
T ss_dssp CCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------
T ss_pred ceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccccccc
Confidence 1112333333 278889999999999 45555554442 4456667777777766655 1 11112
Q ss_pred EEEcCCCCeEeccccceEEEEEc--CcEEEEEeCCCCeEEEE
Q psy9327 274 AIVNGDHGIIRTLDLPIYITKIK--GNQVYYLDRECSPHVLR 313 (641)
Q Consensus 274 ~l~~~~~g~I~~~d~p~~~~~~~--g~~v~~~~~dg~i~v~~ 313 (641)
.....+.+.|..+.. ... +..+++++.||.|++|+
T Consensus 401 ~~~~~h~~~I~~i~~-----~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 401 DDSLYHHDIINSIST-----CEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------CCCEEEEEE-----EESSSSEEEEEEETTSCEEEEC
T ss_pred CcccccccceeeEee-----eccCCceEEEEEcCCceEEEeC
Confidence 223334555554332 223 67899999999999995
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=2.5e-27 Score=257.17 Aligned_cols=248 Identities=17% Similarity=0.260 Sum_probs=203.8
Q ss_pred eeeccCCCCeEEEEEccC-CCeEEEEeCCCcEEEEECcc----------CcccccccccccCeEEEEEeCCCC-EEEEec
Q psy9327 3 TKFETKSARVKGLSFHPK-RPWILSSLHNGVIQLWDYRM----------NTLLEKFDEHEGPVRGICFHNQQP-IFVSGG 70 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspd-g~~Lasg~~dg~I~iWD~~~----------~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs 70 (641)
.....|.+.|++++|+|+ +.+|++|+.||.|++||+.+ .+.+..+..|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345689999999999997 67999999999999999987 567778889999999999999988 999998
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee-------EEEEccCCCCeEEEEEcc-CCCEEEEEeCC
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-------IFTLLGHLDYIRTTFFHH-EYPWILSASDD 142 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-------~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D 142 (641)
.||+|++||+.++.. ...+.+|.+.|.+++|+| ++.+|++++.|
T Consensus 202 ----------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 253 (430)
T 2xyi_A 202 ----------------------------DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD 253 (430)
T ss_dssp ----------------------------TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred ----------------------------CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC
Confidence 999999999987422 567788999999999999 67899999999
Q ss_pred CeEEEEECCCC---eeEEEEccCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCc
Q psy9327 143 QTIRIWYWQSR---NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 143 g~I~vWd~~~~---~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v 217 (641)
+.|++||++++ +++..+.+|...|++++|+|++. ++++|+.||+|++||+++ ......+.+|...+.++... |-
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s-p~ 332 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS-PH 332 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC-SS
T ss_pred CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC-CC
Confidence 99999999987 57778889999999999999886 799999999999999998 45566777676666654322 11
Q ss_pred eeeeeeeeeeCCCeeEEEecCCC---------------cceeeec-CCcceEEEEEcCCcc-EEEEecCCeEEEEEcCCC
Q psy9327 218 WKYCKPVKYCNPKHTLHICNRKM---------------EPLCNIH-ENTRVKSGAWDESGV-FIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d~~~---------------~~~~~~~-~~~~I~sla~~p~g~-~L~t~s~~~k~~l~~~~~ 280 (641)
-. .-+++++.++.|.+||... ..+.... +...|.+++|+|++. ++++++.++.+.+|+...
T Consensus 333 ~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 333 NE--TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CT--TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CC--CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 00 1166788999999999432 2333332 366799999999998 888888888888887654
Q ss_pred C
Q psy9327 281 G 281 (641)
Q Consensus 281 g 281 (641)
+
T Consensus 411 ~ 411 (430)
T 2xyi_A 411 N 411 (430)
T ss_dssp H
T ss_pred c
Confidence 4
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=5.7e-27 Score=253.69 Aligned_cols=244 Identities=14% Similarity=0.262 Sum_probs=190.0
Q ss_pred ceeeccCC------------CCeEEEEEccCC--CeEEEEeCCCcEEEEECccCccc-----------------------
Q psy9327 2 LTKFETKS------------ARVKGLSFHPKR--PWILSSLHNGVIQLWDYRMNTLL----------------------- 44 (641)
Q Consensus 2 l~~~~~H~------------~~V~~l~fspdg--~~Lasg~~dg~I~iWD~~~~~~l----------------------- 44 (641)
+..+++|. +.|++++|+|++ .+|++|+.||+|++||+.+++..
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 45788998 889999999998 79999999999999999764431
Q ss_pred ----------------cc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEE
Q psy9327 45 ----------------EK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107 (641)
Q Consensus 45 ----------------~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD 107 (641)
.. ..+|..+|.+++|+|++.+|++| .|+.|++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-----------------------------~d~~i~iwd 204 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-----------------------------DDLRINLWH 204 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-----------------------------CSSEEEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-----------------------------CCCeEEEEE
Confidence 12 35799999999999999999987 599999999
Q ss_pred CCC-CeeEEE-------EccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCee----EEEEccCCC----------
Q psy9327 108 YKQ-RKCIFT-------LLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNC----ICVLTGHNH---------- 164 (641)
Q Consensus 108 ~~t-~~~~~~-------~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~----i~~l~~h~~---------- 164 (641)
+++ ++.+.. +.+|.+.|.+++|+|++ .+|++|+.|++|++||+++++. +..+.+|..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 3dw8_B 205 LEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEI 284 (447)
T ss_dssp TTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHH
T ss_pred CCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccccccccc
Confidence 994 444442 56899999999999998 8999999999999999999886 788888886
Q ss_pred --CEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeec---ccCCC---ceeeee-----eeeeeCCC
Q psy9327 165 --YVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSM---KSKHP---IWKYCK-----PVKYCNPK 230 (641)
Q Consensus 165 --~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~---~~~~~---v~~~~~-----~l~s~~~d 230 (641)
.|.+++|+|++.+|++++. ++|++||+++ ++....+.+|......+ ..... ++.+++ .+++++.|
T Consensus 285 ~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d 363 (447)
T 3dw8_B 285 ISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN 363 (447)
T ss_dssp TTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST
T ss_pred CceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC
Confidence 8999999999999999999 9999999997 77777777664221100 00000 011111 17788999
Q ss_pred eeEEEecCCCcceee----------------------------------ecCCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 231 HTLHICNRKMEPLCN----------------------------------IHENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 231 ~~I~i~d~~~~~~~~----------------------------------~~~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
+.|++||........ +.....|.+++|+|+|.+|++++.++-+..
T Consensus 364 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~ 442 (447)
T 3dw8_B 364 NFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIF 442 (447)
T ss_dssp TEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEE
T ss_pred CEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeee
Confidence 999999944322211 122456889999999999999987764443
No 95
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-26 Score=233.73 Aligned_cols=240 Identities=20% Similarity=0.207 Sum_probs=206.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccC---cccccccccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN---TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~---~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+..+..|.+.|.+++|+|+++++++|+.||.|++|++... +.+..+..|..+|.+++| ++..+++++
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-------- 121 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGS-------- 121 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEE--------
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEe--------
Confidence 3567889999999999999999999999999999998654 557778889999999999 567899997
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.|++|| .++....+..|.+.+.+++|+| ++.++++++.|+.|++|| .++...
T Consensus 122 --------------------~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~ 177 (313)
T 3odt_A 122 --------------------WDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIK 177 (313)
T ss_dssp --------------------TTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEE
T ss_pred --------------------CCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEE
Confidence 999999999 7888999999999999999998 899999999999999999 566777
Q ss_pred EEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 158 VLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 158 ~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.+.. |...|.+++|+|++. +++++.||.|++||+++++....+.+|...+.++.....- .+++++.++.|++|
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~dg~v~iw 251 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-----DIVSCGEDRTVRIW 251 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-----CEEEEETTSEEEEE
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-----CEEEEecCCEEEEE
Confidence 8877 999999999999998 9999999999999999999998888887777765433211 26788899999999
Q ss_pred c-CCCcceeeecC-CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 237 N-RKMEPLCNIHE-NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 237 d-~~~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
| .+......+.. ...|.+++|+|++. +++++.++.+.+|+.+++.
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 9 55555555544 56899999999998 5678889999999877654
No 96
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=1e-27 Score=255.92 Aligned_cols=258 Identities=17% Similarity=0.177 Sum_probs=210.8
Q ss_pred CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC
Q psy9327 31 GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110 (641)
Q Consensus 31 g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t 110 (641)
..+..|+.........+.+|.++|.+++|+|++++|++|+ .|++|++||..+
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s----------------------------~D~~v~iWd~~~ 97 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSAS----------------------------QDGRLIVWNALT 97 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEE----------------------------TTSEEEEEETTT
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEe----------------------------CCCeEEEEECCC
Confidence 3455677767777888999999999999999999999998 999999999999
Q ss_pred CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-------eEEEEccCCCCEEEEEEecCC-CEEEEEe
Q psy9327 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-------CICVLTGHNHYVMCAQFHPTD-DIVVSAS 182 (641)
Q Consensus 111 ~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~-------~i~~l~~h~~~V~sl~fsp~g-~~lvSgs 182 (641)
++....+..|...|.+++|+|++.++++|+.|+.|++||+.+.. ....+.+|.+.|.++.|+|++ ..|++|+
T Consensus 98 ~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s 177 (380)
T 3iz6_a 98 SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS 177 (380)
T ss_dssp TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC
T ss_pred CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC
Confidence 99999999999999999999999999999999999999987532 345678999999999999974 5799999
Q ss_pred CCCeEEEEecCCCceeeec-----cCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC--Ccceeeec-CCcceEE
Q psy9327 183 LDQTIRVWDISGLRKKNVA-----PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK--MEPLCNIH-ENTRVKS 254 (641)
Q Consensus 183 ~DgtI~IWD~~~~~~~~~~-----~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~--~~~~~~~~-~~~~I~s 254 (641)
.|++|++||+++++....+ .+|...+.++....+-- ..+++++.|+.|++||.+ ...+..+. +...|.+
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~ 254 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNA---NMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINS 254 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSC---CEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCE
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCC---CEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEE
Confidence 9999999999999887766 44555565544321110 126788899999999943 34454444 5789999
Q ss_pred EEEcCCccEEEEecCCeEEEEEcCCCCe-Eecccc------------ceEEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 255 GAWDESGVFIYTTSNHIKYAIVNGDHGI-IRTLDL------------PIYITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 255 la~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~~d~------------p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
++|+|+|.++++++.|+.+.+|+...+. +..+.. ....+..++..+++++.||.+++|+....+.
T Consensus 255 v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 9999999999999999999999987764 333321 1234567899999999999999999765443
No 97
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=3.7e-27 Score=253.02 Aligned_cols=238 Identities=11% Similarity=0.116 Sum_probs=170.1
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc-----cccccccccCeEEEEEeC--------CCCEEEEeceeeEEe
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL-----LEKFDEHEGPVRGICFHN--------QQPIFVSGGKMIVMA 76 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~-----l~~~~~h~~~V~~i~fsp--------~~~~l~sgs~~~~~~ 76 (641)
..+....+++++.++++|+.|++|+|||.++++. +..+.+|.+.|.+++|+| ++.+|++|+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s------ 163 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG------ 163 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE------
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE------
Confidence 3333444455667899999999999999987753 455789999999999998 788999998
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.|++|+|||+.++.++..+.+|.++|.+++|+|++. +|++|+.|++|++||+++++.
T Consensus 164 ----------------------~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 164 ----------------------DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp ----------------------TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred ----------------------CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 999999999999998888889999999999999875 799999999999999988754
Q ss_pred EEE-------------------------EccCCCCEEEEEEe-cCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceee
Q psy9327 156 ICV-------------------------LTGHNHYVMCAQFH-PTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209 (641)
Q Consensus 156 i~~-------------------------l~~h~~~V~sl~fs-p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~ 209 (641)
... ..+|...+.++.|+ |++..+++++.|+++++||+.+++....+..+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~ 301 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLG 301 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------
T ss_pred cccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccc
Confidence 322 24688889999997 7999999999999999999998777666654432222
Q ss_pred ecccCCC---------ceeee-------eeeeeeCCCeeEEEec-CCCcce-eeecCCcceEEEEEcCCccEEEEecCCe
Q psy9327 210 SMKSKHP---------IWKYC-------KPVKYCNPKHTLHICN-RKMEPL-CNIHENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 210 s~~~~~~---------v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~-~~~~~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
+...... ..... .-+++++.|+.|++|| .++... ....+..+|.+++|+|+|.+|++++.++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 302 PKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp --CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred cEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 2111000 00000 1156788899999999 334333 3445678999999999999999999887
Q ss_pred EEEE
Q psy9327 272 KYAI 275 (641)
Q Consensus 272 k~~l 275 (641)
.+.+
T Consensus 382 v~lv 385 (393)
T 4gq1_A 382 VLLT 385 (393)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6543
No 98
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=1.8e-26 Score=237.55 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=192.4
Q ss_pred cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC--CeeEEEEccCC
Q psy9327 44 LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ--RKCIFTLLGHL 121 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t--~~~~~~~~~h~ 121 (641)
+..+.+|.+.|.+++|+|++++|++|+ .|++|++||+.+ ++++.++.+|.
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s----------------------------~D~~v~iw~~~~~~~~~~~~l~gH~ 53 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCS----------------------------SDKTIKIFEVEGETHKLIDTLTGHE 53 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEE----------------------------TTSCEEEEEBCSSCBCCCEEECCCS
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEe----------------------------CCCEEEEEecCCCCcEEEEEEcccc
Confidence 345678999999999999999999998 999999999974 46788999999
Q ss_pred CCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC
Q psy9327 122 DYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 122 ~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++|.+++|+|+ +.+|++|+.|++|++||+++++ ++..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 99999999863 8899999999999999998874 66778899999999999997 899999999999999999876
Q ss_pred ce--eeeccCCCceeeecccCCCcee----------eeeeeeeeCCCeeEEEecCC-Cc----ceeeec-CCcceEEEEE
Q psy9327 196 RK--KNVAPGMGKLVLSMKSKHPIWK----------YCKPVKYCNPKHTLHICNRK-ME----PLCNIH-ENTRVKSGAW 257 (641)
Q Consensus 196 ~~--~~~~~~~~~~v~s~~~~~~v~~----------~~~~l~s~~~d~~I~i~d~~-~~----~~~~~~-~~~~I~sla~ 257 (641)
.. ...+.+|...+.++... |... ....+++++.|+.|++||.+ .. ....+. +...|.+++|
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~-p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWA-PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEEC-CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CceeeeeeecccCccceEeec-CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 32 34455666666554322 2100 01137888999999999933 22 233333 5788999999
Q ss_pred cCCc---cEEEEecCCeEEEEEcCCCCe----Eecc-----ccceE--EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 258 DESG---VFIYTTSNHIKYAIVNGDHGI----IRTL-----DLPIY--ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g---~~L~t~s~~~k~~l~~~~~g~----I~~~-----d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|++ .++++++.|+.+.+|+.+.+. ...+ ..++. .+..++..+++++.|+.+++|+.+.
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 9984 899999999999999866531 1122 22333 2456789999999999999998863
No 99
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-27 Score=266.44 Aligned_cols=239 Identities=8% Similarity=0.086 Sum_probs=182.7
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-ccccccccccCeEEE--EEeCCC-CEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGI--CFHNQQ-PIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i--~fsp~~-~~l~sgs~~~~~~~~ 78 (641)
..+.+|.+.|++++|+|++ .|++|+.||+|++||++++. ....+..|.++|.++ +|+|++ .+|++|+
T Consensus 260 ~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-------- 330 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-------- 330 (524)
T ss_dssp EEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE--------
T ss_pred EEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec--------
Confidence 3678999999999999865 89999999999999998774 445678999999999 567887 8899998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC--CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD--YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~--~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++++..++.+|.. .|.+++|+|+++.+++++.|++|++||++++.++
T Consensus 331 --------------------~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 331 --------------------VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp --------------------TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred --------------------cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 999999999999888777777764 5889999999999999999999999999999998
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.++.+|.+.|++++|+|+++.|+||+.||+|++||.... ............ ....+|.+.++ ..++.+++|
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~----~~~~v~~v~~s----p~g~~~~~~ 461 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQ----KSLRLWKWDYS----IKDDKYRID 461 (524)
T ss_dssp EEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------C----CCCEEEECBCC----SSSCEEEEC
T ss_pred eeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccce----eeeEEEEeccC----CCCCeEEcc
Confidence 899999999999999999999999999999999998653 221111000000 00112222221 122345555
Q ss_pred c--------CCCcceeeec-CCcceEEEEEcCCc---cEEEEecCCeEEEEEcCC
Q psy9327 237 N--------RKMEPLCNIH-ENTRVKSGAWDESG---VFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 237 d--------~~~~~~~~~~-~~~~I~sla~~p~g---~~L~t~s~~~k~~l~~~~ 279 (641)
+ .++..+..+. +...|.+++|+|++ .++++|+.+|.+.||+.+
T Consensus 462 ~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 462 SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred CCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 5 1233333333 57899999999995 499999999999998753
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=2.1e-26 Score=249.98 Aligned_cols=237 Identities=23% Similarity=0.345 Sum_probs=202.8
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+..|.+.|.+++|++ ..+++|+
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s----------- 230 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCS----------- 230 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEE-----------
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEee-----------
Confidence 4578899999999999 788999999999999999999999999999999999999974 4888887
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeE---EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCI---FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~---~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.|++||+.+++.. ..+.+|.+.|.+++| ++.++++|+.|++|++||+++++++..
T Consensus 231 -----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 231 -----------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp -----------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -----------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 9999999999987655 678899999999999 678999999999999999999999999
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+.+|...|.++.|+ +..+++|+.||+|++||+++++....+.+|...+.++..... .+++++.|+.|++||.
T Consensus 292 ~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~------~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK------RIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSS------EEEEEETTSCEEEEEH
T ss_pred EcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCC------EEEEEeCCCcEEEEEC
Confidence 99999999999994 789999999999999999999999999988888877665221 2678889999999992
Q ss_pred C-Cc---------ceeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 239 K-ME---------PLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 239 ~-~~---------~~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
. .. .+..+ .+...|.+++| ++.++++++.|+.+.+|+..++.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 364 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp HHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 2 11 33333 35778999999 56789999999999999876543
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.4e-26 Score=267.07 Aligned_cols=183 Identities=10% Similarity=0.138 Sum_probs=147.3
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEecee-eEEeee-------
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM-IVMAYQ------- 78 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~-~~~~~~------- 78 (641)
.|.+.|.+++|+| |++|++++.|++|++||+.+++.+..+. |.+.|.+++|+|++.++++|+.. .+..|+
T Consensus 56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 4788999999999 8899999999999999999999888885 77899999999999999998732 222222
Q ss_pred ------------------ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC------------------CC
Q psy9327 79 ------------------GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH------------------LD 122 (641)
Q Consensus 79 ------------------~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h------------------~~ 122 (641)
+.+......|.....+++++.|+.| +||+++++++..+..| .+
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~ 212 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP 212 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC
Confidence 1223334445555678899999999 9999999999988766 57
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE--E---cc-------------CCCCEEEEEEec----CC-CEEE
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV--L---TG-------------HNHYVMCAQFHP----TD-DIVV 179 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~--l---~~-------------h~~~V~sl~fsp----~g-~~lv 179 (641)
.|.+++|+|++.+|++|+.|++|++||+++++++.. + .+ |...|.+++|++ ++ .+++
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~ 292 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLI 292 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEE
Confidence 899999999999999999999999999999988764 2 12 345799999964 33 4677
Q ss_pred EEeCC-----CeEEEEec
Q psy9327 180 SASLD-----QTIRVWDI 192 (641)
Q Consensus 180 Sgs~D-----gtI~IWD~ 192 (641)
+|+.| +.+++|++
T Consensus 293 sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 293 SHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEECSTTSSCCCEEEEEE
T ss_pred eCCCCCCCCCceEEEEec
Confidence 77665 36777773
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=2.5e-26 Score=238.84 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=186.5
Q ss_pred ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCe
Q psy9327 47 FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYI 124 (641)
Q Consensus 47 ~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V 124 (641)
+.+|.++|.+++|+|++.+|++|+ .|++|++||+.+++ .+.++.+|.++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs----------------------------~D~~v~lwd~~~~~~~~~~~l~gH~~~V 60 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCS----------------------------SDRSVKIFDVRNGGQILIADLRGHEGPV 60 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEE----------------------------TTTEEEEEEEETTEEEEEEEEECCSSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEe----------------------------CCCeEEEEEecCCCcEEEEEEcCCCccE
Confidence 458999999999999999999998 99999999998875 567899999999
Q ss_pred EEEEEcc--CCCEEEEEeCCCeEEEEECCCC--eeEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCCce-
Q psy9327 125 RTTFFHH--EYPWILSASDDQTIRIWYWQSR--NCICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGLRK- 197 (641)
Q Consensus 125 ~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~--~~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~~~- 197 (641)
.+++|+| ++.+|+||+.|++|++||++++ .+...+.+|...|++++|+|+ +.+|++|+.|++|++||+++...
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 9999976 4889999999999999999887 467788999999999999998 78999999999999999987532
Q ss_pred --eeeccCCCceeeecccCCCce-------------eeeeeeeeeCCCeeEEEecCC-C---cceeeec-CCcceEEEEE
Q psy9327 198 --KNVAPGMGKLVLSMKSKHPIW-------------KYCKPVKYCNPKHTLHICNRK-M---EPLCNIH-ENTRVKSGAW 257 (641)
Q Consensus 198 --~~~~~~~~~~v~s~~~~~~v~-------------~~~~~l~s~~~d~~I~i~d~~-~---~~~~~~~-~~~~I~sla~ 257 (641)
...+.+|...+.++....... .....+++++.|+.|++||.+ . .....+. +...|.+++|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 344455554444432211100 001137788999999999954 2 2333333 4678999999
Q ss_pred cCCc----cEEEEecCCeEEEEEcCCCC--------eEeccccceEE--EEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 258 DESG----VFIYTTSNHIKYAIVNGDHG--------IIRTLDLPIYI--TKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g----~~L~t~s~~~k~~l~~~~~g--------~I~~~d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|++ .+|++++.|+.+.+|+.++. .+...+.++.. +..++..+++++.|+.+++|+.+.
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9986 89999999999999986652 23333444443 446688999999999999999863
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.6e-25 Score=244.32 Aligned_cols=275 Identities=8% Similarity=0.042 Sum_probs=212.0
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCc---ccccccc------------------------------------
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDE------------------------------------ 49 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~---~l~~~~~------------------------------------ 49 (641)
..++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3678999999999966655 57899999999888 5544432
Q ss_pred ------------------cccCeEEEEEeCCCCEE-EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-
Q psy9327 50 ------------------HEGPVRGICFHNQQPIF-VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK- 109 (641)
Q Consensus 50 ------------------h~~~V~~i~fsp~~~~l-~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~- 109 (641)
|.+.|.+++|+|++++| ++|+ .|+.|++||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----------------------------~dg~v~iwd~~~ 134 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD----------------------------SDKSLLVFDVDK 134 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEG----------------------------GGTEEEEEEECS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC----------------------------CCCeEEEEECcC
Confidence 33479999999999996 7776 89999999999
Q ss_pred -CCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE----EEccCCCCEEEEEEecC---CCEEE
Q psy9327 110 -QRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC----VLTGHNHYVMCAQFHPT---DDIVV 179 (641)
Q Consensus 110 -t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~----~l~~h~~~V~sl~fsp~---g~~lv 179 (641)
+++.+..+. .|...|.+++|+|++.+|++|+.|+.|++|++.+++... .+.+|...|++++|+|+ +.+|+
T Consensus 135 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 135 TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE
T ss_pred CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE
Confidence 888888886 577899999999999999999999999999998876443 77889999999999999 99999
Q ss_pred EEeCCCeEEEEecCCCceeee-ccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeec----------
Q psy9327 180 SASLDQTIRVWDISGLRKKNV-APGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIH---------- 247 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~---------- 247 (641)
+|+.|++|++||+++++.... ..+|...+.++..... ..+++++.|+.|++|| ..+..+..+.
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~-----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKD-----YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECST-----TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred EEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCC-----CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 999999999999999887776 5577777766543211 1266788999999999 4455454443
Q ss_pred ----------------CCcceEEEEEcCCccEEEEec-CCeEEEEEcC--CCC----eEeccc--cceEEEEEc-CcEEE
Q psy9327 248 ----------------ENTRVKSGAWDESGVFIYTTS-NHIKYAIVNG--DHG----IIRTLD--LPIYITKIK-GNQVY 301 (641)
Q Consensus 248 ----------------~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~--~~g----~I~~~d--~p~~~~~~~-g~~v~ 301 (641)
....+.+++|+|++.++++++ .++.+.+|+. ..+ .+..+. .++...... +..++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v 369 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQV 369 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEE
Confidence 134688999999999999998 8999999987 433 222222 223322222 44455
Q ss_pred EEeC-------CCCeEEEEeCCc
Q psy9327 302 YLDR-------ECSPHVLRIDPT 317 (641)
Q Consensus 302 ~~~~-------dg~i~v~~~~~~ 317 (641)
+.+. +..+.+|.++..
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEETT
T ss_pred EEecccCCCCCCcceEEEEEEcC
Confidence 5443 344788887754
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=4.1e-26 Score=242.50 Aligned_cols=198 Identities=12% Similarity=0.077 Sum_probs=167.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEe--CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL--HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+...+.+++|||||+++++++ .|++|+|||+.+++.+..++ |.+.|.+++|+|++.++++++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s-------------- 195 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT-------------- 195 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC--------------
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc--------------
Confidence 3456799999999999987544 68999999999999888874 888999999999999999986
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC----eEEEEECCCCee---
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ----TIRIWYWQSRNC--- 155 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg----~I~vWd~~~~~~--- 155 (641)
++.+.+|+..+++.+.. ..+|...|++++|+|++..+++++.|+ .+++||......
T Consensus 196 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 196 ---------------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp ---------------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred ---------------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce
Confidence 45677777777766543 456889999999999999999999887 688899876653
Q ss_pred -EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec-cCCCceeeecccCCCceeeeeeeeeeCCCeeE
Q psy9327 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA-PGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTL 233 (641)
Q Consensus 156 -i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~-~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I 233 (641)
...+.+|...|++++|+|+|.+|++|+.|++|+|||+++++.+..+ .+
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g------------------------------ 310 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA------------------------------ 310 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS------------------------------
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc------------------------------
Confidence 4567899999999999999999999999999999999988766553 22
Q ss_pred EEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 234 HICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
|...|++++|+|+|.+|+++|.|+.+.+|+.
T Consensus 311 --------------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 311 --------------HSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp --------------SSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred --------------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 3567899999999999999988877777764
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=4e-25 Score=227.35 Aligned_cols=244 Identities=15% Similarity=0.224 Sum_probs=196.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
++++|...|++++|+|++++|++|+.||+|++||+++++.+..+.+|...+.++.+ ++..+++++
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~------------- 126 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGS------------- 126 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEE-------------
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEe-------------
Confidence 34678899999999999999999999999999999999999999999999887665 456888887
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCC-eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe----eEEE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN----CICV 158 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~----~i~~ 158 (641)
.++.+++|+..++ ..+..+.+|...+..++|++++.++++++.|++|++||+++++ ....
T Consensus 127 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 191 (318)
T 4ggc_A 127 ---------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 191 (318)
T ss_dssp ---------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEE
T ss_pred ---------------cCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceee
Confidence 9999999998876 5567888999999999999999999999999999999998765 3455
Q ss_pred EccCCCCEEEEEEecCCC-E--EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 159 LTGHNHYVMCAQFHPTDD-I--VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~-~--lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
...|.+.|.++.++|++. . +++++.|++|++||.+............ .+..+..... ... .-++++..++.|++
T Consensus 192 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~-~v~~~~~~~~-~~~-~~~~sg~~d~~i~i 268 (318)
T 4ggc_A 192 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPH-YKE-LISGHGFAQNQLVI 268 (318)
T ss_dssp ECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS-CEEEEEEETT-TTE-EEEEECTTTCCEEE
T ss_pred ecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee-eeeeeeeccc-ccc-eEEEEEcCCCEEEE
Confidence 677899999999999765 3 3467789999999999877665554322 2222111100 000 01345668999999
Q ss_pred ec-CCCcceeeec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCC
Q psy9327 236 CN-RKMEPLCNIH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280 (641)
Q Consensus 236 ~d-~~~~~~~~~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~ 280 (641)
|| .++..+..+. |...|.+++|+|+|.+|++++.|+.+.+|+..+
T Consensus 269 wd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 269 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99 5677777775 578999999999999999999999999997543
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.8e-26 Score=240.94 Aligned_cols=263 Identities=11% Similarity=0.027 Sum_probs=196.6
Q ss_pred EccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 17 fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+.+++.++++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s-------------------------- 92 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRG-------------------------- 92 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEEC--------------------------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEec--------------------------
Confidence 44578899999999999999999998888775 578889999998 88887
Q ss_pred eeCCCeEEEEECC---------CCeeEEEEc-cCCCCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCCeeEEEEc-cCC
Q psy9327 97 LGDDYKIKVWNYK---------QRKCIFTLL-GHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCICVLT-GHN 163 (641)
Q Consensus 97 ~s~Dg~I~vWD~~---------t~~~~~~~~-~h~~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-~h~ 163 (641)
.|++|++|+.. +++.+..+. +|.++|.+++|+| ++.++++|+.|++|++||+++++++.... .|.
T Consensus 93 --~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 170 (343)
T 3lrv_A 93 --PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD 170 (343)
T ss_dssp --STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS
T ss_pred --CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC
Confidence 89999999654 555555554 6888999999999 99999999999999999999999877764 455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee-eeccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK-NVAPG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~-~~~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~ 240 (641)
..|++++|+|++.++++|+.||+|++||+++++.. ..+.+ |...|.++..... - ..+++++ ++.|++|| ++.
T Consensus 171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~-g---~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN-G---YWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT-S---SEEEEEE-SSBEEEEETTSS
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC-C---CEEEEEe-CCeEEEEEcCCC
Confidence 68999999999999999999999999999999887 66776 7777766543211 1 1155665 44999999 444
Q ss_pred cceeeec----CCcce--EEEEEcCCccEEEEecC-CeEEEEEcCCCCeEecccc-ceE--EEEE---cCcEEEEEeCCC
Q psy9327 241 EPLCNIH----ENTRV--KSGAWDESGVFIYTTSN-HIKYAIVNGDHGIIRTLDL-PIY--ITKI---KGNQVYYLDREC 307 (641)
Q Consensus 241 ~~~~~~~----~~~~I--~sla~~p~g~~L~t~s~-~~k~~l~~~~~g~I~~~d~-p~~--~~~~---~g~~v~~~~~dg 307 (641)
.....+. +...+ .+++|+|+|.++++++. ++.+.+|+.+.+. +.|+. |+. .+.. +...++.++.||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 324 (343)
T 3lrv_A 246 VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT-KNWTKDEESALCLQSDTADFTDMDVVCGDG 324 (343)
T ss_dssp TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CSEEEEEEEECCC----CCCCEEEEEEETT
T ss_pred CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc-cceEecCceeEecCccccccceeEEEecCC
Confidence 4433322 12333 36999999999999887 8889998654321 11221 111 1222 567888889999
Q ss_pred CeEEEEeCCcc
Q psy9327 308 SPHVLRIDPTE 318 (641)
Q Consensus 308 ~i~v~~~~~~~ 318 (641)
.+.++-.....
T Consensus 325 ~~~~~~~~~~~ 335 (343)
T 3lrv_A 325 GIAAILKTNDS 335 (343)
T ss_dssp EEEEEEECSSE
T ss_pred ceEEEEecCCe
Confidence 98888665544
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-25 Score=243.62 Aligned_cols=234 Identities=14% Similarity=0.121 Sum_probs=185.6
Q ss_pred ccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECc--cCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 6 ETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYR--MNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~--~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
.+|.+.|.+++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+|++.+|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~---------- 168 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD---------- 168 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE----------
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe----------
Confidence 4677899999999999996 899999999999999 888888876 5678999999999999999998
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEE----EEccCCCCeEEEEEccC---CCEEEEEeCCCeEEEEECCCC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF----TLLGHLDYIRTTFFHHE---YPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~----~~~~h~~~V~~v~fsp~---~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
.|+.|++||+.+++... .+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++++
T Consensus 169 ------------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 169 ------------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp ------------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred ------------------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 89999999998876543 77889999999999999 999999999999999999999
Q ss_pred eeEEE-EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeec--------------ccCCC
Q psy9327 154 NCICV-LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSM--------------KSKHP 216 (641)
Q Consensus 154 ~~i~~-l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~--------------~~~~~ 216 (641)
+++.. +.+|...|++++|+ ++.+|++++.|++|++||+++++....+..+. ..+... .....
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 98887 56999999999999 99999999999999999999998877665321 000000 00011
Q ss_pred ceeeee-----eeeeeC-CCeeEEEecC--C-C---cceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 217 IWKYCK-----PVKYCN-PKHTLHICNR--K-M---EPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 217 v~~~~~-----~l~s~~-~d~~I~i~d~--~-~---~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
+..+.+ .++++. .++.|.+|+. . . ..+..+.....+.+++|+|++.+++.++
T Consensus 310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp EEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECC
T ss_pred EEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEec
Confidence 111211 134444 8999999996 2 2 3344455568899999999755444433
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-25 Score=233.57 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=197.2
Q ss_pred CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEc
Q psy9327 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLL 118 (641)
Q Consensus 41 ~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~ 118 (641)
|+++..+.+|.++|.+++|+|++++|++|+ .|+.|++||+. +++.+..+.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~----------------------------~dg~i~iw~~~~~~~~~~~~~~ 52 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCS----------------------------SDKTIKIFEVEGETHKLIDTLT 52 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEE----------------------------TTSCEEEEEEETTEEEEEEEEC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEE----------------------------CCCcEEEEecCCCcceeeeEec
Confidence 456778899999999999999999999998 99999999998 567788899
Q ss_pred cCCCCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEec
Q psy9327 119 GHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 119 ~h~~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~ 192 (641)
+|.+.|++++|+++ +.+|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|+ +..+++++.|++|++||+
T Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 99999999999987 8999999999999999999987 78888899999999999999 999999999999999999
Q ss_pred CCCce--eeeccCCCceeeecccCCCcee---------eeeeeeeeCCCeeEEEecCC-Cc----ceeeec-CCcceEEE
Q psy9327 193 SGLRK--KNVAPGMGKLVLSMKSKHPIWK---------YCKPVKYCNPKHTLHICNRK-ME----PLCNIH-ENTRVKSG 255 (641)
Q Consensus 193 ~~~~~--~~~~~~~~~~v~s~~~~~~v~~---------~~~~l~s~~~d~~I~i~d~~-~~----~~~~~~-~~~~I~sl 255 (641)
++... ...+.++...+.++........ -...+++++.++.|++||.+ .. ....+. +...|.++
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 88743 3344556666666443221000 01126778899999999933 22 222232 47889999
Q ss_pred EEcCC---ccEEEEecCCeEEEEEcCCCC----eEecc-----ccceE--EEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 256 AWDES---GVFIYTTSNHIKYAIVNGDHG----IIRTL-----DLPIY--ITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 256 a~~p~---g~~L~t~s~~~k~~l~~~~~g----~I~~~-----d~p~~--~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
+|+|+ +.++++++.++.+.+|+...+ ..... ..++. .+..++..+++++.||.+++|+++.
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99999 899999999999999997765 22222 22233 3556788999999999999999985
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-25 Score=265.27 Aligned_cols=281 Identities=9% Similarity=0.082 Sum_probs=209.2
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+|.+.|++++|+|++++||+|+.||+|+|||...++....+ .|..+|.+++|+| +.+|++++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s-------------- 76 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVIN-------------- 76 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEE--------------
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEE--------------
Confidence 4589999999999999999999999999999998877665554 4788999999999 78999997
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE--------
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-------- 156 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i-------- 156 (641)
.|++|++||+.+++++.++. |.+.|++++|+|++.++++|+.||+|++||++++++.
T Consensus 77 --------------~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 77 --------------AKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp --------------TTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred --------------CcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccc
Confidence 99999999999999998886 7789999999999999999999999999999988764
Q ss_pred ---EEEccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCC---cee-----ee-cccCCCceeeeee
Q psy9327 157 ---CVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLV-----LS-MKSKHPIWKYCKP 223 (641)
Q Consensus 157 ---~~l~~h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v-----~s-~~~~~~v~~~~~~ 223 (641)
..+.+|.+.|++++|+|+ +..+++|+.||+| +||+++++....+..+. ..- .. .....++..+.+.
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc
Confidence 234679999999999996 5789999999999 99999998877776440 000 00 0001123333332
Q ss_pred -----eeeeCCCeeEEEecC-CCcceee--e-----c------------CCcceEEEEEc----CCc-cEEEEecCC---
Q psy9327 224 -----VKYCNPKHTLHICNR-KMEPLCN--I-----H------------ENTRVKSGAWD----ESG-VFIYTTSNH--- 270 (641)
Q Consensus 224 -----l~s~~~d~~I~i~d~-~~~~~~~--~-----~------------~~~~I~sla~~----p~g-~~L~t~s~~--- 270 (641)
+++++.|+.|++||. +++.+.. + + +...|.+++|+ |++ ..+++|+.+
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 788999999999994 4444432 2 1 13479999994 553 567777543
Q ss_pred --eEEEEEc-CCC------------------CeEecccc----ceEEEE------------EcCcEEEEEeCCCCeEEEE
Q psy9327 271 --IKYAIVN-GDH------------------GIIRTLDL----PIYITK------------IKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 271 --~k~~l~~-~~~------------------g~I~~~d~----p~~~~~------------~~g~~v~~~~~dg~i~v~~ 313 (641)
..+.+|. +.+ ...+.+.. .+.... .++..++.++.||.+++|+
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 2455554 211 11222211 111111 1234788888999999999
Q ss_pred eCCc
Q psy9327 314 IDPT 317 (641)
Q Consensus 314 ~~~~ 317 (641)
+.++
T Consensus 381 ~~~g 384 (902)
T 2oaj_A 381 YPSG 384 (902)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8654
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.4e-25 Score=237.33 Aligned_cols=242 Identities=12% Similarity=0.108 Sum_probs=170.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..++.|.+.|++++|+|||++|++|+.+| +++||..+++..... +...+..++++++++.++..+
T Consensus 13 ~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------ 77 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFVT------------ 77 (355)
T ss_dssp ------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEEC------------
T ss_pred cccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEEE------------
Confidence 35688999999999999999999998776 789998877655443 233588899999888875433
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-----------------------------
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY----------------------------- 133 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~----------------------------- 133 (641)
+.|++|++||..+++++..+. |...|.+++|+++.
T Consensus 78 ---------------~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 141 (355)
T 3vu4_A 78 ---------------GVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGG 141 (355)
T ss_dssp ---------------SSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEE
T ss_pred ---------------CCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCc
Confidence 155566666666666555554 44455555555432
Q ss_pred ------CEEEE--EeCCCeEEEEECCCCe----------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCe-EE
Q psy9327 134 ------PWILS--ASDDQTIRIWYWQSRN----------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQT-IR 188 (641)
Q Consensus 134 ------~~l~s--gs~Dg~I~vWd~~~~~----------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dgt-I~ 188 (641)
.+++. |+.||.|++||+++++ ++..+.+|.+.|++++|+|+|.+|++|+.|++ |+
T Consensus 142 ~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 142 VCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred eEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 34444 5789999999998765 27789999999999999999999999999998 99
Q ss_pred EEecCCCceeeecc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEe
Q psy9327 189 VWDISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 189 IWD~~~~~~~~~~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~ 267 (641)
+||+++++....+. + .+...|.+++|+|+|.+|+++
T Consensus 222 iwd~~~~~~~~~~~~g-------------------------------------------~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 222 VFKTEDGVLVREFRRG-------------------------------------------LDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp EEETTTCCEEEEEECT-------------------------------------------TCCSCEEEEEECTTSCEEEEE
T ss_pred EEECCCCcEEEEEEcC-------------------------------------------CCCCcEEEEEECCCCCEEEEE
Confidence 99999877665554 2 024567778888888888888
Q ss_pred cCCeEEEEEcCCCCeEe---ccc--------------------------cceEEEEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 268 SNHIKYAIVNGDHGIIR---TLD--------------------------LPIYITKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 268 s~~~k~~l~~~~~g~I~---~~d--------------------------~p~~~~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
+.|+.+.+|+.+.+... .+. .....+..++..++.++.||.+++|.+.+++
T Consensus 259 s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 88888888876543210 000 0122355567788888888888888776544
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=2.9e-25 Score=235.91 Aligned_cols=283 Identities=10% Similarity=0.005 Sum_probs=198.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCC-------cEEEEECccCccc----------ccccccccCeEEEEEeCCCCEEEEecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNG-------VIQLWDYRMNTLL----------EKFDEHEGPVRGICFHNQQPIFVSGGKM 72 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg-------~I~iWD~~~~~~l----------~~~~~h~~~V~~i~fsp~~~~l~sgs~~ 72 (641)
-+|.+++|+|||++|++||.+. .|++|++..+... ..+..|...|.++++ ++..+++|..
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~- 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN- 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC-
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC-
Confidence 4899999999999999998643 5999998755321 124567778877765 4557777641
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee----EEEE-----ccCCCCeEEEEEccCCCEEEEE--eC
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC----IFTL-----LGHLDYIRTTFFHHEYPWILSA--SD 141 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~----~~~~-----~~h~~~V~~v~fsp~~~~l~sg--s~ 141 (641)
........++.|+.+++|++.+... .... ..+...+++++|+|||+++++| +.
T Consensus 92 ----------------~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~ 155 (365)
T 4h5i_A 92 ----------------ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKV 155 (365)
T ss_dssp ----------------CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCS
T ss_pred ----------------CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCC
Confidence 1112222345788999999876532 1111 2355679999999999987654 47
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee--ccCCCceeeecccCCCcee
Q psy9327 142 DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV--APGMGKLVLSMKSKHPIWK 219 (641)
Q Consensus 142 Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~--~~~~~~~v~s~~~~~~v~~ 219 (641)
|++|++||+++++++..+. |.+.|.+++|+|+|.++++++.| .+++|+..+++.... ..++...+.++... |--.
T Consensus 156 d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs-pdg~ 232 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFI-ADDT 232 (365)
T ss_dssp SCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEE-ETTE
T ss_pred CCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEc-CCCC
Confidence 8999999999999998886 77889999999999999999866 556666666555433 33444455443211 1000
Q ss_pred eeeeeeeeCCCe----eEEEecCCCcc-----eeee-cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe-Eec-c-
Q psy9327 220 YCKPVKYCNPKH----TLHICNRKMEP-----LCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI-IRT-L- 286 (641)
Q Consensus 220 ~~~~l~s~~~d~----~I~i~d~~~~~-----~~~~-~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~-I~~-~- 286 (641)
.+++++.++ .+..|+..... ...+ .+...|.+++|+|+|.+|++|+.|+.+.+|+.+++. ++. +
T Consensus 233 ---~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 233 ---VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ 309 (365)
T ss_dssp ---EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT
T ss_pred ---EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC
Confidence 133443333 67788733221 1222 346789999999999999999999999999998875 443 2
Q ss_pred --ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 287 --DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 287 --d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..++.. +..++..|++++.|+++++|++.+.
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 234443 5578999999999999999999643
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.3e-25 Score=244.14 Aligned_cols=250 Identities=8% Similarity=0.052 Sum_probs=178.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEE----------e
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM----------A 76 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~----------~ 76 (641)
.-...|.+++|||||+++|+++.|++|+ |...+ ..+++|...|.+++|+|+|. ......+ .
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg~----~~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLEF----ENKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCCC----CCTTTTSCCCSSCSSTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCCC----cceEEEEeCCCceEeecC
Confidence 3457899999999999999999999998 64333 33356666666666666661 1000000 0
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-----CeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-----YIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-----~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+...+......| .....++++.||.|++||.++ ++..+. |.. .|.+++|||+|++|++|+.||+|++||++
T Consensus 84 ~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 84 PVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 011111111222 233445566999999999644 677777 776 49999999999999999999999999999
Q ss_pred CCe-------eEEEE----ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee---eec-cCCCceeeecccCCC
Q psy9327 152 SRN-------CICVL----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK---NVA-PGMGKLVLSMKSKHP 216 (641)
Q Consensus 152 ~~~-------~i~~l----~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~---~~~-~~~~~~v~s~~~~~~ 216 (641)
++. .+.++ .+|.+.|.+++|+|+| +++++.|++|++||+.+.... .++ .+|...|.++... .
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g 236 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-D 236 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-T
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-C
Confidence 875 36776 6788899999999999 888999999999999887743 344 3454555544332 1
Q ss_pred ceeeeeeeeeeCCCeeEEEecCCCcce--eeecCCcceEEEEE--cCCccEEEEecCCeEEEEEcCC
Q psy9327 217 IWKYCKPVKYCNPKHTLHICNRKMEPL--CNIHENTRVKSGAW--DESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d~~~~~~--~~~~~~~~I~sla~--~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
..+++++ ++.|++||...... ....+...+.+++| +|++..+++++.+|. .+|..+
T Consensus 237 -----~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 237 -----YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -----TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred -----CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 1245554 68999999554444 23356889999999 999999999999998 777654
No 113
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.8e-24 Score=223.62 Aligned_cols=244 Identities=13% Similarity=0.122 Sum_probs=190.6
Q ss_pred cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccCC
Q psy9327 46 KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGHL 121 (641)
Q Consensus 46 ~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h~ 121 (641)
.+.+|.++|++++|+|++.+|++|+ .||.|++||+.++ +....+.+|.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~----------------------------~dg~i~iw~~~~~~~~~~~~~~~~~~~ 57 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCS----------------------------SDQHIKVFKLDKDTSNWELSDSWRAHD 57 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEE----------------------------TTSEEEEEEECSSSCCEEEEEEEECCS
T ss_pred cCcccccceeEEEEcCCCCEEEEee----------------------------CCCeEEEEECCCCCCcceecceeccCC
Confidence 4568999999999999999999998 9999999999876 5778889999
Q ss_pred CCeEEEEEcc--CCCEEEEEeCCCeEEEEECCCC---------eeEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEE
Q psy9327 122 DYIRTTFFHH--EYPWILSASDDQTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIR 188 (641)
Q Consensus 122 ~~V~~v~fsp--~~~~l~sgs~Dg~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~ 188 (641)
++|.+++|+| ++.+|++|+.|++|++||++++ +++..+.+|...|.+++|+|+ +.++++++.||+|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 9999999999 5899999999999999999887 678889999999999999999 99999999999999
Q ss_pred EEecCCCceeeecc-------------CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc---eeeec-CCcc
Q psy9327 189 VWDISGLRKKNVAP-------------GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP---LCNIH-ENTR 251 (641)
Q Consensus 189 IWD~~~~~~~~~~~-------------~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~---~~~~~-~~~~ 251 (641)
+||+++++....+. ++...+.++... |.......+++++.++.+.+|+..... +..+. +...
T Consensus 138 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 138 LYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC-PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC-CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EecCCChHHhccccccccccccccccCCcccceeEEEec-cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 99999877654432 122222222211 100001126677788888777744333 33333 4779
Q ss_pred eEEEEEcCCc----cEEEEecCCeEEEEEcCCCC----------------------------------------------
Q psy9327 252 VKSGAWDESG----VFIYTTSNHIKYAIVNGDHG---------------------------------------------- 281 (641)
Q Consensus 252 I~sla~~p~g----~~L~t~s~~~k~~l~~~~~g---------------------------------------------- 281 (641)
|.+++|+|++ .++++++.|+.+.+|+...+
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999998 89999999999999986653
Q ss_pred -eEecc---ccceEE--EEEcCcEEEEEeCCCCeEEEEeCCcc
Q psy9327 282 -IIRTL---DLPIYI--TKIKGNQVYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 282 -~I~~~---d~p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~ 318 (641)
.+..+ ..++.. +..++..+++++.||.+++|+++.+.
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 12212 112332 44568899999999999999998754
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.4e-25 Score=244.01 Aligned_cols=223 Identities=10% Similarity=0.132 Sum_probs=172.2
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc-----CeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-----PVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-----~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.|.+.|.+++|||+|.+||+++.||+|++||.+. ++..+. |.. .|.+++|||+|.+|++|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs----------- 148 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN----------- 148 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE-----------
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc-----------
Confidence 5688999999999999999999999999999544 666677 666 499999999999999998
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe-------eEEEE----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-------CIFTL----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW 150 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-------~~~~~----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~ 150 (641)
.||+|++||+.++. .+.++ .+|.+.|.+++|+|++ +++++.|++|++||+
T Consensus 149 -----------------~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 149 -----------------EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp -----------------TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred -----------------CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 99999999999885 36776 6788899999999999 889999999999999
Q ss_pred CCCee---EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC-CCceeeeeeee
Q psy9327 151 QSRNC---ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK-HPIWKYCKPVK 225 (641)
Q Consensus 151 ~~~~~---i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~-~~v~~~~~~l~ 225 (641)
..+.. ..++ .+|...|.+++|+ |..+++++ |++|++||+.+++......+|...+.++... .|- ...++
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d---~~~La 283 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKE---STILL 283 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSS---CEEEE
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCC---CCEEE
Confidence 88773 4567 4888999999999 68999998 6999999999888744444666655543320 110 01133
Q ss_pred eeCCCee-----------------------EEEecCCCcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 226 YCNPKHT-----------------------LHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 226 s~~~d~~-----------------------I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
++..+|. +++|+..+..+..+.....|.+++|+|+|..+++++
T Consensus 284 ~a~edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 284 MSNKTSYKVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp ECSSCEEEEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEE
T ss_pred EEcCCCCEEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEE
Confidence 4444454 444443333333333445578888888888888776
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=4.9e-24 Score=229.99 Aligned_cols=274 Identities=11% Similarity=0.046 Sum_probs=215.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-----cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-----KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-----~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+.+++|+|++.++++++.++.|++||..+++.+. .+..|.+.|.+++|+|++.++++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-------------- 188 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM-------------- 188 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG--------------
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC--------------
Confidence 446699999987788888889999999999988776 4567899999999999999999998
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.|+.|++||+++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++.+..+..+
T Consensus 189 --------------~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~- 253 (433)
T 3bws_A 189 --------------QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI- 253 (433)
T ss_dssp --------------GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-
T ss_pred --------------CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-
Confidence 899999999999999999999999999999999999875 5558999999999999988888754
Q ss_pred CCEEEEEEecCCCEEEEEe--------CCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEE
Q psy9327 164 HYVMCAQFHPTDDIVVSAS--------LDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs--------~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i 235 (641)
..+.+++|+|++..+++++ .|+.|++||+++++....... ...+.++.. +|--. .-+.++..++.+.+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~-~~~g~--~l~~~~~~~~~v~v 329 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVS-GNTEN--KIYVSDMCCSKIEV 329 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEE-CSSTT--EEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEE-CCCCC--EEEEEecCCCEEEE
Confidence 5699999999999999988 589999999998876655421 112222111 11100 01456678999999
Q ss_pred ecC-CCcceeeecCCcceEEEEEcCCccEEEEecC---------------CeEEEEEcCCCCeEe-ccc---cceE-EEE
Q psy9327 236 CNR-KMEPLCNIHENTRVKSGAWDESGVFIYTTSN---------------HIKYAIVNGDHGIIR-TLD---LPIY-ITK 294 (641)
Q Consensus 236 ~d~-~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~---------------~~k~~l~~~~~g~I~-~~d---~p~~-~~~ 294 (641)
||. .......+.....+.+++|+|+|.++++++. ++.+.+|+..++.+. .+. .+.. .+.
T Consensus 330 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s 409 (433)
T 3bws_A 330 YDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVS 409 (433)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEc
Confidence 994 4566667777888999999999999988875 469999998777543 222 1211 244
Q ss_pred EcCcEEEEEeC-CCCeEEEEeCC
Q psy9327 295 IKGNQVYYLDR-ECSPHVLRIDP 316 (641)
Q Consensus 295 ~~g~~v~~~~~-dg~i~v~~~~~ 316 (641)
.++..+++.+. |+.+++|+++.
T Consensus 410 ~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 410 PDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEEecC
Confidence 56778887764 99999999874
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=6.3e-25 Score=228.54 Aligned_cols=231 Identities=12% Similarity=0.026 Sum_probs=190.8
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEEC-ccCcccccccc--cccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDY-RMNTLLEKFDE--HEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~-~~~~~l~~~~~--h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
..+.+|.+.|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.. |...|.+++|+| +..+++++
T Consensus 50 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~-------- 119 (342)
T 1yfq_A 50 LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAAS-------- 119 (342)
T ss_dssp EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEE--------
T ss_pred eeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEc--------
Confidence 45668999999999999999 9999999999999999 77754 67778 999999999999 99999998
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCC---------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ---------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t---------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
.|+.|++||+++ ++++.++. |.+.|.+++|+|++ +++++.|+.|++||
T Consensus 120 --------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d 176 (342)
T 1yfq_A 120 --------------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFR 176 (342)
T ss_dssp --------------------TTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEE
T ss_pred --------------------CCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEE
Confidence 999999999988 77777776 89999999999988 99999999999999
Q ss_pred CCC-Ce--eEEEEccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEecCCC------ceeeeccCCCc---------eeee
Q psy9327 150 WQS-RN--CICVLTGHNHYVMCAQFHP-TDDIVVSASLDQTIRVWDISGL------RKKNVAPGMGK---------LVLS 210 (641)
Q Consensus 150 ~~~-~~--~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~DgtI~IWD~~~~------~~~~~~~~~~~---------~v~s 210 (641)
+++ +. .......|...|.+++|+| ++.++++++.||.|++||++.. +....+..+.. .+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256 (342)
T ss_dssp SSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEE
T ss_pred CCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEE
Confidence 988 44 3445567889999999999 9999999999999999999876 55666665533 4444
Q ss_pred cccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecC--CcceEEEEEcCCccEEEEecCCeE
Q psy9327 211 MKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHE--NTRVKSGAWDESGVFIYTTSNHIK 272 (641)
Q Consensus 211 ~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k 272 (641)
+.. +|-- ..+++++.++.|++|| .+...+..+.. ..+|.+++ |+|.+|++++.|+.
T Consensus 257 ~~~-s~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 257 IEF-SPRH---KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEE-CTTT---CCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEE-cCCC---CEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 321 1111 1167888999999999 44666666653 67899999 99999999887654
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=6.3e-25 Score=226.96 Aligned_cols=218 Identities=11% Similarity=0.056 Sum_probs=148.7
Q ss_pred CCeEEEEEccC----CCeEEEEeCCCcEEEEECccCccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPK----RPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspd----g~~Lasg~~dg~I~iWD~~~~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
+.|.+++|+|+ ++++++++++ +++|++.+++.+.. ..+|++.|+.++|+|+|+.+.+-. .......+...
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~---~~~~~v~~l~f 186 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF---LMPPEETILTF 186 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE---ECCCSSCEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeec---cCCCceeeEEe
Confidence 46788888889 8888887753 55566555555544 344555555555555555444321 00000111111
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC---CCeEEEEEccCCCEE------------EEEeCCCeEEEEE
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL---DYIRTTFFHHEYPWI------------LSASDDQTIRIWY 149 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~---~~V~~v~fsp~~~~l------------~sgs~Dg~I~vWd 149 (641)
...+.....+++++.|++|+|||+++|+++.++.+|. ..+.+++|+|++..+ ++|+.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 1112233444455699999999999999999998754 367788999999876 6688999999999
Q ss_pred CCCCeeEEEE-----ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeee
Q psy9327 150 WQSRNCICVL-----TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 150 ~~~~~~i~~l-----~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
..+++++..+ .+|...+.+..++ +.++++++.|++|+|||+.++++..++.+|.
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~------------------- 325 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVS------------------- 325 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--------------------
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCC-------------------
Confidence 9999988776 4787776555444 8899999999999999999999888876542
Q ss_pred eeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 225 KYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
...+.+++|+|+|.+|++|+.|+.+.+|+
T Consensus 326 ------------------------~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 326 ------------------------DQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp -------------------------CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ------------------------CCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 11233589999999999999888888885
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=231.75 Aligned_cols=258 Identities=14% Similarity=0.199 Sum_probs=207.5
Q ss_pred CCcEEEEECccCcccccccccccCeEEEEEeC-CCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEEC
Q psy9327 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNY 108 (641)
Q Consensus 30 dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~ 108 (641)
++.+++|++..++....+..|.++|.+++|+| ++.+|++|+ .||.|++||+
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~----------------------------~dg~i~iw~~ 73 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGG----------------------------SDGVIVLYDL 73 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEE----------------------------TTSCEEEEEC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEc----------------------------CCCeEEEEEC
Confidence 45688999988888888889999999999999 999999998 9999999999
Q ss_pred CCCeeEEEEc-------------cCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC
Q psy9327 109 KQRKCIFTLL-------------GHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 109 ~t~~~~~~~~-------------~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~ 174 (641)
.+++....+. +|.+.|.+++|+| ++.+|++++.|+.|++||+.++++...+. +...+.++.|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~ 152 (408)
T 4a11_B 74 ENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPV 152 (408)
T ss_dssp CCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSS
T ss_pred CCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecC
Confidence 9876544442 5999999999999 77799999999999999999999888887 7888999999995
Q ss_pred C---CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-Cc-ceee----
Q psy9327 175 D---DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-ME-PLCN---- 245 (641)
Q Consensus 175 g---~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~-~~~~---- 245 (641)
+ .++++++.|+.|++||+++++....+.+|...+.++... |--. .-+++++.++.|++||.+ .. .+..
T Consensus 153 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~ 229 (408)
T 4a11_B 153 STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS-PRYD--YILATASADSRVKLWDVRRASGCLITLDQH 229 (408)
T ss_dssp CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC-SSCT--TEEEEEETTSCEEEEETTCSSCCSEECCTT
T ss_pred CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC-CCCC--cEEEEEcCCCcEEEEECCCCCccccccccc
Confidence 4 499999999999999999999888888887777765432 1111 015678899999999943 22 2222
Q ss_pred ------------ecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC--------------------------------
Q psy9327 246 ------------IHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-------------------------------- 281 (641)
Q Consensus 246 ------------~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-------------------------------- 281 (641)
..+...|.+++|+|+|.++++++.++.+.+|+..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T 4a11_B 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF 309 (408)
T ss_dssp TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE
T ss_pred ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE
Confidence 234678999999999999999999999999986543
Q ss_pred -----eEecccc--------------ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 282 -----IIRTLDL--------------PI--YITKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 282 -----~I~~~d~--------------p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.|+.|+. ++ ..+..++..+++++.||.+++|+++..+.
T Consensus 310 ~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 310 VPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 2333332 12 22556788999999999999999997553
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.9e-25 Score=229.80 Aligned_cols=234 Identities=11% Similarity=0.019 Sum_probs=176.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECc---------cCccccccc-ccccCeEEEEEeC--CCCEEEEeceeeEEee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYR---------MNTLLEKFD-EHEGPVRGICFHN--QQPIFVSGGKMIVMAY 77 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~---------~~~~l~~~~-~h~~~V~~i~fsp--~~~~l~sgs~~~~~~~ 77 (641)
..|.++.|+|+ +++|+.|++|++|+.. +++.+..+. .|.++|.+++|+| ++.++++++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s------- 146 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD------- 146 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE-------
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe-------
Confidence 56778888988 9999999999999765 444344443 5678999999999 999999998
Q ss_pred eceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
.|++|++||++++++...+.. |...|.+++|+|++.+|++|+.|+.|++||+++++++
T Consensus 147 ---------------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 147 ---------------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ---------------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred ---------------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 999999999999998777744 5568999999999999999999999999999999887
Q ss_pred -EEEcc-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC---ceee--ecccCCCceeeeeeeeeeCC
Q psy9327 157 -CVLTG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG---KLVL--SMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 157 -~~l~~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~---~~v~--s~~~~~~v~~~~~~l~s~~~ 229 (641)
..+.+ |.+.|++++|+|++.+|++++.| +|++||+++.+....+..+. ..+. ++. .+|--. .+++++.
T Consensus 206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~---~l~~~s~ 280 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD-IDDSGK---NMIAYSN 280 (343)
T ss_dssp CEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEE-ECTTSS---EEEEEET
T ss_pred ccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEE-ECCCCC---EEEEecC
Confidence 78888 99999999999999999999954 99999999987765554321 1110 011 111100 1455555
Q ss_pred -CeeEEEecC-CCcceeeecCCcceEEEEEcC---CccEEEEecCCeEEEEEcCCCCe
Q psy9327 230 -KHTLHICNR-KMEPLCNIHENTRVKSGAWDE---SGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 230 -d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p---~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
++.+++|+. +....... .++..++|++ ++..+++++.++.+.++-..+..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred CCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEEEecCCe
Confidence 899999983 22221111 5677889998 88889988888777766544333
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=1.1e-22 Score=216.28 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=194.9
Q ss_pred eeeccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..|. .+.+++|+|+|+++ ++++.|++|++||..+++.+..+..+. .+.+++|+|+++++++++
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~----------- 92 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTN----------- 92 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEE-----------
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEE-----------
Confidence 4556564 58999999999977 677789999999999999888886555 999999999999886654
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+.++.|++||+.+++.+..+..| ..+.+++|+|+++++ ++++.|+.|++||+.+++++..+.
T Consensus 93 ----------------~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 93 ----------------MASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp ----------------TTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ----------------CCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 27899999999999998888754 568999999999977 788889999999999999998887
Q ss_pred cCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeC---CCeeEEEe
Q psy9327 161 GHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN---PKHTLHIC 236 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~---~d~~I~i~ 236 (641)
.| ..+.+++|+|++..+ ++++.|++|++||+++++....+... ..+.++.. +|--. .+..+. .++.|.+|
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~-~~~g~---~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE-AAPSGIAV-NPEGT---KAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SEEEEEEE-CTTSS---EEEEEEECSSCCEEEEE
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC-CCccceEE-CCCCC---EEEEEecCcCCCcEEEE
Confidence 65 457999999999877 67788999999999998877766532 23333221 11100 023333 68999999
Q ss_pred c-CCCcceeeecCCcceEEEEEcCCccEE-EEecCCeEEEEEcCCCCeE
Q psy9327 237 N-RKMEPLCNIHENTRVKSGAWDESGVFI-YTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 237 d-~~~~~~~~~~~~~~I~sla~~p~g~~L-~t~s~~~k~~l~~~~~g~I 283 (641)
| .....+..+.....+.+++|+|+|.++ ++++.++.+.+|+.+++.+
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 9 556666777767778999999999888 5667899999999887764
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=2.3e-24 Score=222.74 Aligned_cols=172 Identities=16% Similarity=0.206 Sum_probs=136.2
Q ss_pred eeeccCCCCeEEEEEcc---CCCeEEEEeCCCcEEEEECccCcccccccccc---cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 3 TKFETKSARVKGLSFHP---KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE---GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp---dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~---~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
..+.+|+..++.++|+| ++.+|++|+.|++|+|||+.+|+.+.++.+|. ..|.+++|+|++..+++++.
T Consensus 172 ~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~----- 246 (356)
T 2w18_A 172 ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH----- 246 (356)
T ss_dssp EEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred eeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc-----
Confidence 34556777777777777 66789999999999999999999999998654 46888899999999988761
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
+......++++.|++|++||..+++.+.++ .+|.+.+.+..+ ++.++++|+.|++|+|||+.
T Consensus 247 -----------~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 247 -----------PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ----------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred -----------CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECC
Confidence 122234567789999999999999988776 477777554444 48899999999999999999
Q ss_pred CCeeEEEEccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 152 SRNCICVLTGHNHYVM-CAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~-sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+++++.++.+|.+.+. +++|+|+|++|+||+.|++|||||.
T Consensus 314 tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999988665 5899999999999999999999996
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=1.1e-23 Score=228.58 Aligned_cols=207 Identities=19% Similarity=0.343 Sum_probs=172.8
Q ss_pred ceeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcc-------cccccccccCeEEEEEeC-CCCEEEEecee
Q psy9327 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTL-------LEKFDEHEGPVRGICFHN-QQPIFVSGGKM 72 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~-------l~~~~~h~~~V~~i~fsp-~~~~l~sgs~~ 72 (641)
+..+.+|.+.|.+++|+|++. +|++|+.||.|++||+.++.. ...+..|...|.+++|+| ++..|++++
T Consensus 174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-- 251 (430)
T 2xyi_A 174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA-- 251 (430)
T ss_dssp SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE--
T ss_pred cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe--
Confidence 457889999999999999998 999999999999999987432 455668999999999999 677888887
Q ss_pred eEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEE
Q psy9327 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148 (641)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vW 148 (641)
.|+.|++||++++ +++..+..|.+.|++++|+|+++ ++++|+.|++|++|
T Consensus 252 --------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 252 --------------------------DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp --------------------------TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred --------------------------CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 9999999999987 67888889999999999999987 78999999999999
Q ss_pred ECCC-CeeEEEEccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCC--------------ceeeeccCCCceeeecc
Q psy9327 149 YWQS-RNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGL--------------RKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 149 d~~~-~~~i~~l~~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~--------------~~~~~~~~~~~~v~s~~ 212 (641)
|+++ +.++..+.+|...|.+++|+|++ .++++++.|++|++||++.. +......+|...+.++.
T Consensus 306 d~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 385 (430)
T 2xyi_A 306 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385 (430)
T ss_dssp ETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEE
T ss_pred eCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEE
Confidence 9998 56788999999999999999998 47999999999999999872 34445555665565543
Q ss_pred cCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 213 SKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 213 ~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
.. |--. ..+++++.++.|++|+..
T Consensus 386 ~~-p~~~--~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 386 WN-PNEP--WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EC-SSST--TEEEEEETTSEEEEEEEC
T ss_pred EC-CCCC--CEEEEEECCCCEEEeEcc
Confidence 22 1100 126778899999999944
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=2.2e-22 Score=213.98 Aligned_cols=264 Identities=10% Similarity=0.043 Sum_probs=205.1
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEE-EEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF-VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l-~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.++++++.|+.|++||..+++.+..+..|. .+.+++|+|++.++ ++++ .|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~----------------------------~d 53 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANA----------------------------HS 53 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEG----------------------------GG
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECC----------------------------CC
Confidence 467888999999999999999888887664 58999999999987 5555 89
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE-
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV- 178 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l- 178 (641)
++|++||..+++.+..+..+. .+.+++|+|++++++ +++.|+.|++||+.+++.+..+..| ..+.+++|+|+++.+
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLY 131 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEE
Confidence 999999999999999888655 899999999999775 5557799999999999998888754 568999999999977
Q ss_pred EEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEE
Q psy9327 179 VSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAW 257 (641)
Q Consensus 179 vSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~ 257 (641)
++++.|+.|++||+.+++....+..+.. +.++. .+|--.. -+.++..++.|.+|| ........+.....+.+++|
T Consensus 132 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~-~~~dg~~--l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 207 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTKAVINTVSVGRS-PKGIA-VTPDGTK--VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV 207 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCSS-EEEEE-ECTTSSE--EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEecCCC-cceEE-ECCCCCE--EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE
Confidence 7888899999999999888777764322 22221 1111000 124667889999999 45556666667778999999
Q ss_pred cCCccEEEEec---CCeEEEEEcCCCCeE-ecccc---ceE-EEEEcCcEE-EEEeCCCCeEEEEeCCcchh
Q psy9327 258 DESGVFIYTTS---NHIKYAIVNGDHGII-RTLDL---PIY-ITKIKGNQV-YYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 258 ~p~g~~L~t~s---~~~k~~l~~~~~g~I-~~~d~---p~~-~~~~~g~~v-~~~~~dg~i~v~~~~~~~~~ 320 (641)
+|+|.++++++ .++.+.+|+..++.. ..+.. +.. .+..++..+ ++.+.|+.+++|+..+++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 99999999888 689999999877643 22222 221 234557667 56688999999999875544
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=1.1e-22 Score=214.89 Aligned_cols=240 Identities=11% Similarity=0.146 Sum_probs=171.4
Q ss_pred CCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee----ec
Q psy9327 10 ARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL----ES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~----~~ 84 (641)
..+..++++++++.+ ++|+.|++|++||..+++.+..+. |..+|.+++|+++...++. +..+..|+.... ..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSY--GDVISVFKFGNPWKRITD 135 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEE--TTEEEEEESSTTCCBSSC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEE--cCEEEEEECCCCceeeEE
Confidence 357888999988877 567788999999999999888885 7779999999987543333 233333322111 00
Q ss_pred ccCCcc-----eeeEEE--eeCCCeEEEEECCCCe----------------eEEEEccCCCCeEEEEEccCCCEEEEEeC
Q psy9327 85 RNEPCL-----FRIKSV--LGDDYKIKVWNYKQRK----------------CIFTLLGHLDYIRTTFFHHEYPWILSASD 141 (641)
Q Consensus 85 ~~~~~~-----~~~~~~--~s~Dg~I~vWD~~t~~----------------~~~~~~~h~~~V~~v~fsp~~~~l~sgs~ 141 (641)
...+.. +...++ ++.||.|++||+.+++ .+..+.+|.++|.+++|+|++.+|++|+.
T Consensus 136 ~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~ 215 (355)
T 3vu4_A 136 DIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ 215 (355)
T ss_dssp CEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC
Confidence 000000 022333 6899999999999875 27889999999999999999999999999
Q ss_pred CCe-EEEEECCCCeeEEEEc-c-CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceee--eccCCCceeeecccCCC
Q psy9327 142 DQT-IRIWYWQSRNCICVLT-G-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN--VAPGMGKLVLSMKSKHP 216 (641)
Q Consensus 142 Dg~-I~vWd~~~~~~i~~l~-~-h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~--~~~~~~~~v~s~~~~~~ 216 (641)
|++ |++||+++++++.++. + |...|.+++|+|++.+|++++.|++|++||++...... .+.+. +. ......
T Consensus 216 d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~---~~-~~~~~~ 291 (355)
T 3vu4_A 216 DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGW---IN-MKYFQS 291 (355)
T ss_dssp TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTT---EE-CCCCCC
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccce---ee-cccccc
Confidence 998 9999999999999998 6 99999999999999999999999999999998653221 11110 00 011111
Q ss_pred ceeeeeeeeeeCCCeeEEEecCCCcceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 217 IWKYCKPVKYCNPKHTLHICNRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 217 v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
.|..+. ..+. ...+...++|+++|..+++++.++++.+|.
T Consensus 292 ~~~~~~---------------------~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 292 EWSLCN---------------------FKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SSCSEE---------------------EECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ccceeE---------------------EEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 111100 0001 123346689999999999998888777764
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=8.7e-23 Score=213.61 Aligned_cols=249 Identities=13% Similarity=0.112 Sum_probs=190.6
Q ss_pred EECccCcccccccccccCeEEEEEeCC---CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-C
Q psy9327 36 WDYRMNTLLEKFDEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-R 111 (641)
Q Consensus 36 WD~~~~~~l~~~~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~ 111 (641)
|+....+.+..+.+|.+.|.+++|+|+ +.+|++|+ .|+.|++||+.+ +
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~----------------------------~dg~i~iw~~~~~~ 75 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGS----------------------------WANDVRCWEVQDSG 75 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEE----------------------------TTSEEEEEEECTTS
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEEC----------------------------CCCcEEEEEcCCCC
Confidence 445556677788899999999999999 58999998 999999999997 5
Q ss_pred eeE-EEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE--ecCCCEEEEEeCCCeEE
Q psy9327 112 KCI-FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF--HPTDDIVVSASLDQTIR 188 (641)
Q Consensus 112 ~~~-~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f--sp~g~~lvSgs~DgtI~ 188 (641)
..+ ..+.+|.+.|.+++|+|++++|++|+.|+.|++||+++++++. +.+|...|.+++| +|++.++++++.||+|+
T Consensus 76 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 76 QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 544 7888999999999999999999999999999999999998776 5569999999999 88999999999999999
Q ss_pred EEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcc--eeeec--CCcceEEEEEcCCcc--
Q psy9327 189 VWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEP--LCNIH--ENTRVKSGAWDESGV-- 262 (641)
Q Consensus 189 IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~--~~~~~--~~~~I~sla~~p~g~-- 262 (641)
+||+++++....+..+. .+.++....+. +..+..++.+.+|+..... ..... ....+.++++.+++.
T Consensus 155 vwd~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPE-RCYCADVIYPM------AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNK 227 (368)
T ss_dssp EECSSCSSCSEEEECSS-CEEEEEEETTE------EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSC
T ss_pred EEECCCCcEEEEEecCC-CceEEEecCCe------eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCC
Confidence 99999988887776543 33332322221 4456678999999944322 12221 234445555544333
Q ss_pred --EEEEecCCeEEEEEcCCCCe-------Eecccc------------ceEE--EEEcCcEEEEEeCCCCeEEEEeCCcch
Q psy9327 263 --FIYTTSNHIKYAIVNGDHGI-------IRTLDL------------PIYI--TKIKGNQVYYLDRECSPHVLRIDPTEF 319 (641)
Q Consensus 263 --~L~t~s~~~k~~l~~~~~g~-------I~~~d~------------p~~~--~~~~g~~v~~~~~dg~i~v~~~~~~~~ 319 (641)
.+++++.++.+.+|+.+.+. +..-.. ++.. +..++..+++++.||.+++|++.+.+.
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 39999999999999877652 111111 2222 445678999999999999999887554
Q ss_pred h
Q psy9327 320 K 320 (641)
Q Consensus 320 ~ 320 (641)
.
T Consensus 308 ~ 308 (368)
T 3mmy_A 308 L 308 (368)
T ss_dssp E
T ss_pred E
Confidence 3
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.4e-23 Score=242.16 Aligned_cols=245 Identities=15% Similarity=0.129 Sum_probs=192.6
Q ss_pred cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--CCeeEEEEccCC
Q psy9327 44 LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--QRKCIFTLLGHL 121 (641)
Q Consensus 44 l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t~~~~~~~~~h~ 121 (641)
+..+.+|.++|++++|+|+++++++|+ .||+|++||+. +++.+.++.+|.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~----------------------------~dg~I~vwd~~~~~~~~~~~l~~h~ 53 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCS----------------------------SDKTIKIFEVEGETHKLIDTLTGHE 53 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEE----------------------------TTTEEEEEEEETTEEEEEEEECCCS
T ss_pred eeecccCcceeEEEEECCCCCeEEEEE----------------------------CCCcEEEEecCCCCCccceeccCCc
Confidence 345779999999999999999999998 99999999998 557788999999
Q ss_pred CCeEEEEEccC--CCEEEEEeCCCeEEEEECCCCe--eEEEEccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEecCCC
Q psy9327 122 DYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN--CICVLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 122 ~~V~~v~fsp~--~~~l~sgs~Dg~I~vWd~~~~~--~i~~l~~h~~~V~sl~fsp~--g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++|++++|+|+ +.+|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ +..+++|+.||+|++||+++.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 99999999988 8999999999999999999987 77888999999999999999 999999999999999999887
Q ss_pred ce--eeeccCCCceeeecccCCCcee---------eeeeeeeeCCCeeEEEecCC-C----cceeee-cCCcceEEEEEc
Q psy9327 196 RK--KNVAPGMGKLVLSMKSKHPIWK---------YCKPVKYCNPKHTLHICNRK-M----EPLCNI-HENTRVKSGAWD 258 (641)
Q Consensus 196 ~~--~~~~~~~~~~v~s~~~~~~v~~---------~~~~l~s~~~d~~I~i~d~~-~----~~~~~~-~~~~~I~sla~~ 258 (641)
.. .....++...+.++........ -...+++++.++.|++||.+ . .....+ .+...|.+++|+
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 33 3344556666666443221000 01127788899999999933 2 222233 347899999999
Q ss_pred CC---ccEEEEecCCeEEEEEcCCCCe------Eecc---ccce--EEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 259 ES---GVFIYTTSNHIKYAIVNGDHGI------IRTL---DLPI--YITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 259 p~---g~~L~t~s~~~k~~l~~~~~g~------I~~~---d~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
|+ +.++++++.++.+.+|+...+. +... ..++ ..+..++..+++++.||.+++|+++.
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99 9999999999999999877652 1111 1122 23556788999999999999999885
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=2.6e-22 Score=216.48 Aligned_cols=246 Identities=11% Similarity=0.054 Sum_probs=195.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+.+|.+.|.+++|+|++.++++++.||.|++||.++++.+..+..|...+.+++|+|++..+++++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------- 230 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN------------- 230 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE-------------
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe-------------
Confidence 4568999999999999999999999999999999999999888988999999999999999885554
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe--------CCCeEEEEECCCCee
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS--------DDQTIRIWYWQSRNC 155 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs--------~Dg~I~vWd~~~~~~ 155 (641)
+.|+.|++||+++++.+..+..+ +.+.+++|+|+++++++++ .|+.|++||+++++.
T Consensus 231 --------------~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 231 --------------WISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp --------------TTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred --------------cCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 27999999999999998888754 5689999999999999888 589999999999987
Q ss_pred EEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccC--CC-ceeeee--------e
Q psy9327 156 ICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK--HP-IWKYCK--------P 223 (641)
Q Consensus 156 i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~--~~-v~~~~~--------~ 223 (641)
+..+ .|...+.+++|+|+++. +++++.|+.|++||+.+++....++. +..+.++... .. ++.... .
T Consensus 296 ~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 296 IDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-FDKPNTIALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp EEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEECCCCCTTTCT
T ss_pred Eeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-CCCCCeEEEcCCCCEEEEEecCCCcccccc
Confidence 7666 46678999999999974 56778999999999999887776653 2333332211 11 110000 0
Q ss_pred eeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCC
Q psy9327 224 VKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGD 279 (641)
Q Consensus 224 l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~ 279 (641)
+.+++.|+.|.+|| ..++.+..+.....+.+++|+|+|.++++++ .++.+.+|+.+
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 22334478999999 4566677777778899999999999998876 47888887643
No 128
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=1.4e-22 Score=217.37 Aligned_cols=182 Identities=11% Similarity=0.108 Sum_probs=135.7
Q ss_pred eeeccCCCCeEEEEEcc--------CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCC-EEEEeceee
Q psy9327 3 TKFETKSARVKGLSFHP--------KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGGKMI 73 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fsp--------dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~-~l~sgs~~~ 73 (641)
..+++|.+.|++++|+| |+++||+|+.|++|+|||+.++..+..+..|..+|.+++|+|++. +|++|+
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~--- 206 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE--- 206 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE---
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC---
Confidence 35789999999999998 889999999999999999998888888889999999999999875 688887
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-------------------------EccCCCCeEEEE
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-------------------------LLGHLDYIRTTF 128 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-------------------------~~~h~~~V~~v~ 128 (641)
.|++|++||+++++.... ..+|.+.|.++.
T Consensus 207 -------------------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 207 -------------------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp -------------------------TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred -------------------------CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 999999999988764332 235778899999
Q ss_pred Ec-cCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEE------------------Eec--CCCEEEEEeCCCeE
Q psy9327 129 FH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ------------------FHP--TDDIVVSASLDQTI 187 (641)
Q Consensus 129 fs-p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~------------------fsp--~g~~lvSgs~DgtI 187 (641)
|+ |++..+++++.|+++++||+.+++....+..|...+..+. |+| ++.++++|+.||+|
T Consensus 262 ~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 262 WIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp EETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred eecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 87 7999999999999999999998877777666655554443 333 23467889999999
Q ss_pred EEEecCCCceeeeccCCCceeeecc
Q psy9327 188 RVWDISGLRKKNVAPGMGKLVLSMK 212 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~~~~~v~s~~ 212 (641)
++||+.+++......+++..|.++.
T Consensus 342 ~lwd~~~~~~~~~~~~~~~~V~sva 366 (393)
T 4gq1_A 342 QLINTYEKDSNSIPIQLGMPIVDFC 366 (393)
T ss_dssp EEEETTCTTCCEEEEECSSCEEEEE
T ss_pred EEEECCCCcEEEEecCCCCcEEEEE
Confidence 9999999888777766666666543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=1.4e-19 Score=195.63 Aligned_cols=247 Identities=8% Similarity=0.013 Sum_probs=182.2
Q ss_pred eeccCCCCeEEEEEcc--------------CCCeEEEEeCC------CcEEEEECccCcccccccccccCeEEEEEeCCC
Q psy9327 4 KFETKSARVKGLSFHP--------------KRPWILSSLHN------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63 (641)
Q Consensus 4 ~~~~H~~~V~~l~fsp--------------dg~~Lasg~~d------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~ 63 (641)
.+.+|...+..+++++ .+..++.++.+ ++|++||+. +.....+..|...|.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCC
Confidence 4667777777777765 15666666654 799999997 44567788899999999999999
Q ss_pred CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC---CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EE
Q psy9327 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD---YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SA 139 (641)
Q Consensus 64 ~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D---g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sg 139 (641)
++|++++ .+ ..|++||+.+++.. .+..|.+.+.+++|+|+++.|+ ++
T Consensus 191 ~~la~~s----------------------------~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 191 SKLAYVT----------------------------FESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp SEEEEEE----------------------------CTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEE----------------------------ecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEE
Confidence 9999987 55 49999999999875 5667889999999999999887 66
Q ss_pred eCCCe--EEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeC-CC--eEEEEecCCCceeeeccCCCceeeecccC
Q psy9327 140 SDDQT--IRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL-DQ--TIRVWDISGLRKKNVAPGMGKLVLSMKSK 214 (641)
Q Consensus 140 s~Dg~--I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-Dg--tI~IWD~~~~~~~~~~~~~~~~v~s~~~~ 214 (641)
+.|+. |++||+.++++ ..+..|...+.+++|+|+|+.|++++. ++ .|.+||+.+++... +..++..+.++..
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~- 318 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQNQDADV- 318 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSEEEEEEE-
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-EecCCCcccCeEE-
Confidence 66654 99999998875 577789999999999999999988886 45 67778988876433 3333444433221
Q ss_pred CCceeeeeeeeeeC---CCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCe---EEEEEcCCCCeEecc
Q psy9327 215 HPIWKYCKPVKYCN---PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI---KYAIVNGDHGIIRTL 286 (641)
Q Consensus 215 ~~v~~~~~~l~s~~---~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~---k~~l~~~~~g~I~~~ 286 (641)
.|--.. +++++ .+..|.+||........+.....+.+++|+|+|.+|++++.++ .+++|+.+.+..+.+
T Consensus 319 spdG~~---l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 319 SSDGKF---MVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp CTTSSE---EEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CCCCCE---EEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 111010 22222 2468999995544444555545899999999999998887544 778887766655544
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=3.7e-19 Score=198.89 Aligned_cols=285 Identities=10% Similarity=0.120 Sum_probs=208.3
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEEC--ccCcccccccccccCeEEEEEeC----CCCEEEEeceeeEE
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDY--RMNTLLEKFDEHEGPVRGICFHN----QQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~--~~~~~l~~~~~h~~~V~~i~fsp----~~~~l~sgs~~~~~ 75 (641)
+.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+.++. +...+.+++|+| +++++++++
T Consensus 172 ~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~----- 244 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGA----- 244 (543)
T ss_dssp EEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEE-----
T ss_pred EEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEE-----
Confidence 345553333 889999999999999999999999999 7888888876 455679999999 999999987
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----------CCC-CeEEEEEccCCC-EEEEEeCCC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----------HLD-YIRTTFFHHEYP-WILSASDDQ 143 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----------h~~-~V~~v~fsp~~~-~l~sgs~Dg 143 (641)
..+++|.+||..+++++.++.. |.+ .+.++.++|+++ ++++...++
T Consensus 245 ----------------------~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 245 ----------------------YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp ----------------------EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred ----------------------ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 2689999999999999988864 223 789999999776 566778899
Q ss_pred eEEEEECCCCeeEE--EEccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCCCceeeeccC----CCceeeecccCCC
Q psy9327 144 TIRIWYWQSRNCIC--VLTGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISGLRKKNVAPG----MGKLVLSMKSKHP 216 (641)
Q Consensus 144 ~I~vWd~~~~~~i~--~l~~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~~~~~ 216 (641)
+|.+||+.+.+.+. .+ .+...+..+.|+|+|++++++ ..+++|.+||..+++....++. |......+ .+|
T Consensus 303 ~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~--~~p 379 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF--VHP 379 (543)
T ss_dssp EEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE--EET
T ss_pred eEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc--CCC
Confidence 99999998865433 44 366778899999999976655 5689999999999988877653 21111111 111
Q ss_pred ceeeeeeeeeeC-CCeeEEEecC-C-------CcceeeecC-CcceEEEEEcCCccEEEEecC-------CeEEEEEcCC
Q psy9327 217 IWKYCKPVKYCN-PKHTLHICNR-K-------MEPLCNIHE-NTRVKSGAWDESGVFIYTTSN-------HIKYAIVNGD 279 (641)
Q Consensus 217 v~~~~~~l~s~~-~d~~I~i~d~-~-------~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~-------~~k~~l~~~~ 279 (641)
-.. ..++++. .+++|.+||. . .+.+..+.. +..+..++++|+|.+||+++. +..+.+|+.+
T Consensus 380 ~~g--~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 380 KYG--PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp TTE--EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCc--cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 100 0133443 6799999993 3 556666664 456788999999999999872 5689999887
Q ss_pred CCeE--ecccc---------ceEE----EEEcCcEEEEE-----eCCCCeEEEEeCCcchh
Q psy9327 280 HGII--RTLDL---------PIYI----TKIKGNQVYYL-----DRECSPHVLRIDPTEFK 320 (641)
Q Consensus 280 ~g~I--~~~d~---------p~~~----~~~~g~~v~~~-----~~dg~i~v~~~~~~~~~ 320 (641)
++.+ ..+.. .-.. +..+|..++.. +.|+.|.+|+..+.+..
T Consensus 458 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 458 NLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp CTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEE
Confidence 6542 22211 1111 33568888765 24799999988876654
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=9.5e-19 Score=188.99 Aligned_cols=223 Identities=9% Similarity=-0.001 Sum_probs=171.0
Q ss_pred ceeeccCCCCeEEEEEccCCCeEEEEeCCC---cEEEEECccCcccccccccccCeEEEEEeCCCCEEE-EeceeeEEee
Q psy9327 2 LTKFETKSARVKGLSFHPKRPWILSSLHNG---VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV-SGGKMIVMAY 77 (641)
Q Consensus 2 l~~~~~H~~~V~~l~fspdg~~Lasg~~dg---~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~-sgs~~~~~~~ 77 (641)
++.+.+|.+.|.+++|||+|++|++++.++ .|++||+.+++.. .+..|.+.+.+++|+|+++.|+ +++
T Consensus 171 ~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~------- 242 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALS------- 242 (415)
T ss_dssp CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEEC-------
T ss_pred CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEe-------
Confidence 356788999999999999999999999875 9999999988764 5667888999999999999888 444
Q ss_pred eceeeecccCCcceeeEEEeeCCC--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CC--eEEEEECCC
Q psy9327 78 QGCILESRNEPCLFRIKSVLGDDY--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQ--TIRIWYWQS 152 (641)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg--~I~vWd~~~ 152 (641)
.|+ .|++||+.+++. ..+..|.+.+.+++|+|++++|++++. ++ .|++||..+
T Consensus 243 ---------------------~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 243 ---------------------KTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp ---------------------TTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred ---------------------cCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 444 599999998876 567789999999999999999998886 44 688889888
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEEEEEeCC---CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCC
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLD---QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D---gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~ 229 (641)
++. ..+..|...+.+++|+|+|++|++++.+ ..|++||+.+++... +..+. .+.++. .+|--. .+++++.
T Consensus 301 ~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~-~~~~~~-~spdg~---~l~~~s~ 373 (415)
T 2hqs_A 301 GAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF-LDETPS-LAPNGT---MVIYSSS 373 (415)
T ss_dssp SCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS-SCEEEE-ECTTSS---EEEEEEE
T ss_pred CCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC-CcCCeE-EcCCCC---EEEEEEc
Confidence 764 4556678889999999999999888764 589999999887643 33222 222211 111100 0333333
Q ss_pred Ce---eEEEecCCCcceeeecC-CcceEEEEEcCCc
Q psy9327 230 KH---TLHICNRKMEPLCNIHE-NTRVKSGAWDESG 261 (641)
Q Consensus 230 d~---~I~i~d~~~~~~~~~~~-~~~I~sla~~p~g 261 (641)
++ .|.+||..+.....+.. ...|.+++|+|..
T Consensus 374 ~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred CCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 33 79999977766666654 5789999999974
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=7.9e-19 Score=203.05 Aligned_cols=275 Identities=9% Similarity=0.025 Sum_probs=193.5
Q ss_pred CCCeEEEEEccCCCeEEEEeC-CC-----cEEEEECccCccccccccccc------------------------CeEEEE
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-NG-----VIQLWDYRMNTLLEKFDEHEG------------------------PVRGIC 58 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-dg-----~I~iWD~~~~~~l~~~~~h~~------------------------~V~~i~ 58 (641)
...|.+++|||||++|++++. || +|++||..+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999999876655554433 388999
Q ss_pred EeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEE
Q psy9327 59 FHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWI 136 (641)
Q Consensus 59 fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l 136 (641)
|||||++|++++ . +.|.+||+.++. ....+..|.+.+..++|+|+|++|
T Consensus 116 ~SpDg~~l~~~~----------------------------~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 116 WSPDAQRLLFPL----------------------------G-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp ECTTSSEEEEEE----------------------------T-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEE
T ss_pred ECCCCCEEEEEe----------------------------C-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEE
Confidence 999999999996 3 899999999883 345577788899999999999999
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCC----------------EEEEEEecCCCEEEEEeCCC---------------
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHY----------------VMCAQFHPTDDIVVSASLDQ--------------- 185 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~----------------V~sl~fsp~g~~lvSgs~Dg--------------- 185 (641)
+++++ +.|++||+.+++.......+... +.++.|+|||++|++++.|+
T Consensus 167 a~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~ 245 (741)
T 2ecf_A 167 SFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADR 245 (741)
T ss_dssp EEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSC
T ss_pred EEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCc
Confidence 99885 69999999998876555444432 47899999999999988776
Q ss_pred ------------------eEEEEecCC-CceeeeccC--CCceeeecccCCCcee--eeeeeeeeCCCeeEEEecCC-Cc
Q psy9327 186 ------------------TIRVWDISG-LRKKNVAPG--MGKLVLSMKSKHPIWK--YCKPVKYCNPKHTLHICNRK-ME 241 (641)
Q Consensus 186 ------------------tI~IWD~~~-~~~~~~~~~--~~~~v~s~~~~~~v~~--~~~~l~s~~~d~~I~i~d~~-~~ 241 (641)
.|++||+.+ ++......+ +...+.++.. |--. +.........+..|.+||.. +.
T Consensus 246 ~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 246 TDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred ccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 889999988 776544432 3344443222 1100 00000112346789999943 33
Q ss_pred ceeeecC--Cc---ceEEEEEcCCccEEEEecCCe--EEEEEcCCCCeEecccc---ceE---EEEEcCcEEE-EEeCCC
Q psy9327 242 PLCNIHE--NT---RVKSGAWDESGVFIYTTSNHI--KYAIVNGDHGIIRTLDL---PIY---ITKIKGNQVY-YLDREC 307 (641)
Q Consensus 242 ~~~~~~~--~~---~I~sla~~p~g~~L~t~s~~~--k~~l~~~~~g~I~~~d~---p~~---~~~~~g~~v~-~~~~dg 307 (641)
....... .. .+.+++|+|+|.++++++.++ +++.++.+.+ ++.+.. .+. .+..+++.++ +.+.++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 3333222 22 456899999999888888776 4555554444 544422 221 2556677664 555555
Q ss_pred --CeEEEEeCC
Q psy9327 308 --SPHVLRIDP 316 (641)
Q Consensus 308 --~i~v~~~~~ 316 (641)
.+++|.++.
T Consensus 403 ~~~~~l~~~~~ 413 (741)
T 2ecf_A 403 ARESQIYAVPL 413 (741)
T ss_dssp TTCBEEEEEET
T ss_pred CceEEEEEEEc
Confidence 889998864
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=1.8e-19 Score=195.80 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=135.0
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc----------cccc-----cccccCeEEEEEeCCCCEEE----E
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL----------LEKF-----DEHEGPVRGICFHNQQPIFV----S 68 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~----------l~~~-----~~h~~~V~~i~fsp~~~~l~----s 68 (641)
+...++.+++++++.++++|+.|| +++|+...... +..+ -.+.+.|.+++|+|++.+|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 345689999999999999999988 99988542110 0000 12456799999999999999 5
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC--------e---eEEEEccCCCCeEEEEEccC-CCEE
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--------K---CIFTLLGHLDYIRTTFFHHE-YPWI 136 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~--------~---~~~~~~~h~~~V~~v~fsp~-~~~l 136 (641)
|+ .|++|++||+.++ + .+..+.+|.+.|.+++|+|+ +.+|
T Consensus 114 gs----------------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 114 SE----------------------------YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp TT----------------------------TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred cC----------------------------CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 65 8999999998654 2 24556789999999999998 7899
Q ss_pred EEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 137 ~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
++++.|++|++||++++.......+|...|++++|+|+|.+|++|+.||+|++||.+ ++....+
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 999999999999999998887778899999999999999999999999999999998 4433333
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.82 E-value=7.4e-18 Score=174.60 Aligned_cols=271 Identities=9% Similarity=0.052 Sum_probs=192.2
Q ss_pred EEEccCCCe-EEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 15 LSFHPKRPW-ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 15 l~fspdg~~-Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
..|.+++++ +++++.++.|.+||..+++.+..+..+..++ +++|+|+++++++++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~----------------------- 58 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTS----------------------- 58 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEE-----------------------
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEe-----------------------
Confidence 346666665 6677789999999999998888777666677 999999999777776
Q ss_pred EEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCC---eEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 94 KSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQ---TIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg---~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
..++.|.+||..+++. ...+..+..+..+++|+|++++++++..++ .|.+||..+++.+..+..+ ....++
T Consensus 59 ----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~ 133 (331)
T 3u4y_A 59 ----DFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGI 133 (331)
T ss_dssp ----STTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEE
T ss_pred ----CCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccce
Confidence 2588999999999987 777777777776699999999998655553 9999999999988887644 456899
Q ss_pred EEecCCCEE-EEEeCCCe-EEEEecCCCceee-----eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCc
Q psy9327 170 QFHPTDDIV-VSASLDQT-IRVWDISGLRKKN-----VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKME 241 (641)
Q Consensus 170 ~fsp~g~~l-vSgs~Dgt-I~IWD~~~~~~~~-----~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~ 241 (641)
+|+|+|+++ ++...++. +.+|++....... ... .+.....+. .+|--. .-+.++..++.|.+|| ....
T Consensus 134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-~spdg~--~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS-GGTRPFNIT-FTPDGN--FAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC-SSSSEEEEE-ECTTSS--EEEEEETTTTEEEEEECSSTT
T ss_pred EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcccc-CCCCccceE-ECCCCC--EEEEEeCCCCeEEEEECCCCc
Confidence 999999754 55566688 9999987533221 111 111111111 011000 0134455788999999 4455
Q ss_pred c---eeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEeccc----------cce-----EEEEEcCcEEEE
Q psy9327 242 P---LCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLD----------LPI-----YITKIKGNQVYY 302 (641)
Q Consensus 242 ~---~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~d----------~p~-----~~~~~~g~~v~~ 302 (641)
. +..+.....+..++|+|+|.+++.++ .++.+.+|+.+++.+..+. .+. ..+..++..++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 210 NITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp SCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred ccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEE
Confidence 5 66777777888999999999887665 5778999998888773211 111 245667777766
Q ss_pred Ee-CCCCeEEEEeCCcc
Q psy9327 303 LD-RECSPHVLRIDPTE 318 (641)
Q Consensus 303 ~~-~dg~i~v~~~~~~~ 318 (641)
.+ .++.+.+|++....
T Consensus 290 ~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 290 SANISRELKVFTISGKV 306 (331)
T ss_dssp EETTTTEEEEEETTSCE
T ss_pred ecCCCCcEEEEEecCCc
Confidence 55 55799999988644
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=1.8e-17 Score=172.75 Aligned_cols=242 Identities=7% Similarity=0.010 Sum_probs=184.7
Q ss_pred CCCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
...+..++|+|+|+++++++. ++.|.+||..+++.+..+.. ...+.+++|+|++..+++++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~----------- 107 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGN----------- 107 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEE-----------
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEe-----------
Confidence 456889999999998888774 56899999999988877754 44578899999999666655
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC---------eEEEEEccCCCEEEEEe--CCCeEEEEEC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY---------IRTTFFHHEYPWILSAS--DDQTIRIWYW 150 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~---------V~~v~fsp~~~~l~sgs--~Dg~I~vWd~ 150 (641)
..++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||.
T Consensus 108 ----------------~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 108 ----------------TVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp ----------------TTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred ----------------cCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 27899999999999988888765432 78999999999777665 5889999999
Q ss_pred CCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC----CCceeeecc--cCCCceeeeeee
Q psy9327 151 QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG----MGKLVLSMK--SKHPIWKYCKPV 224 (641)
Q Consensus 151 ~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~----~~~~v~s~~--~~~~v~~~~~~l 224 (641)
.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||..+++....+.. +...+.++. ..... -+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~ 246 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR-----AF 246 (353)
T ss_dssp TTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE-----EE
T ss_pred CCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE-----EE
Confidence 99999988876677788999999999999999999999999999887766543 112221111 11110 02
Q ss_pred eeeCCCeeEEEecC-CCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEe
Q psy9327 225 KYCNPKHTLHICNR-KMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIR 284 (641)
Q Consensus 225 ~s~~~d~~I~i~d~-~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~ 284 (641)
.+...++.+.+||. .++.+..+....+ ..++|+|+|.+++.++ .++.+.+|+..++.+.
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 33445689999994 4555555554433 5699999999777665 6889999998877643
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.80 E-value=1.1e-17 Score=173.37 Aligned_cols=246 Identities=10% Similarity=0.148 Sum_probs=169.5
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCC-CcEEEEECc--cCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHN-GVIQLWDYR--MNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~d-g~I~iWD~~--~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+.+++|+|++.++++++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~----------- 102 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGS----------- 102 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEE-----------
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEe-----------
Confidence 466789999999999999888876 999999997 444 334444333 788999999999887775
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEEC---CCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCC-CeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNY---KQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQS-RNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~---~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~-~~~i 156 (641)
..++.|.+||+ .+++....+..+ ..+.+++|+|+++++++++ .|+.|++||+.+ ++..
T Consensus 103 ----------------~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 103 ----------------YNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp ----------------TTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ----------------cCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 26899999999 444555666544 4588999999999888777 899999999987 5433
Q ss_pred E----EEcc-CCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC--Cce--eee---ccC-CC--ceeeecccCCCceee
Q psy9327 157 C----VLTG-HNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG--LRK--KNV---APG-MG--KLVLSMKSKHPIWKY 220 (641)
Q Consensus 157 ~----~l~~-h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~--~~~--~~~---~~~-~~--~~v~s~~~~~~v~~~ 220 (641)
. .+.. ....+.+++|+|++.+++++ ..++.|++||+.. ++. ... .+. +. ..+..+. .+|--.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~s~dg~- 243 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH-ITPDGR- 243 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE-ECTTSS-
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE-ECCCCC-
Confidence 2 2332 34578899999999976555 4899999999954 322 111 111 00 0111111 011000
Q ss_pred eeeeeeeCCCeeEEEecCC-----CcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEE--cCCCCeEe
Q psy9327 221 CKPVKYCNPKHTLHICNRK-----MEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIV--NGDHGIIR 284 (641)
Q Consensus 221 ~~~l~s~~~d~~I~i~d~~-----~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~--~~~~g~I~ 284 (641)
.-+.+...++.+.+||.. ...+..+.....+.+++|+|+|.++++++ .++.+.+| +.++|..+
T Consensus 244 -~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 244 -HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp -EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred -EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceee
Confidence 013355678999999944 23444444445588999999999888887 57888888 44456544
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=9.8e-19 Score=190.07 Aligned_cols=159 Identities=11% Similarity=0.031 Sum_probs=134.2
Q ss_pred CCCCeEEEEEccCCCeEE----EEeCCCcEEEEECccC--------cc---cccccccccCeEEEEEeCC-CCEEEEece
Q psy9327 8 KSARVKGLSFHPKRPWIL----SSLHNGVIQLWDYRMN--------TL---LEKFDEHEGPVRGICFHNQ-QPIFVSGGK 71 (641)
Q Consensus 8 H~~~V~~l~fspdg~~La----sg~~dg~I~iWD~~~~--------~~---l~~~~~h~~~V~~i~fsp~-~~~l~sgs~ 71 (641)
|.+.|.+++|+|+|++|+ +|+.|++|++||+.++ +. +..+.+|..+|.+++|+|+ +.+|++++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s- 169 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL- 169 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE-
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE-
Confidence 456799999999999999 7888999999998765 11 3456679999999999998 78999997
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~ 151 (641)
.||+|++||++++.......+|...|++++|+|++.+|++|+.|++|++||.+
T Consensus 170 ---------------------------~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 170 ---------------------------ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ---------------------------TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ---------------------------CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999999999998877778899999999999999999999999999999998
Q ss_pred CCeeEEEEccC-------CCCEEEEEEecCCCEEEE-EeCCC------eEEEEecCCC
Q psy9327 152 SRNCICVLTGH-------NHYVMCAQFHPTDDIVVS-ASLDQ------TIRVWDISGL 195 (641)
Q Consensus 152 ~~~~i~~l~~h-------~~~V~sl~fsp~g~~lvS-gs~Dg------tI~IWD~~~~ 195 (641)
++....+..| ...|.+++|++++.++++ ++.|| .+++||+++.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 -LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp -CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred -CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 5555666544 338999999998877754 33443 3999999865
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=1.2e-18 Score=200.88 Aligned_cols=285 Identities=9% Similarity=0.072 Sum_probs=190.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc---CeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG---PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~---~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
..+.+++|+|||+++++ +.||+|++||..+++....+..|.. .|.+++|||||++|++++.....
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~----------- 84 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPI----------- 84 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCC-----------
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccc-----------
Confidence 34678899999997776 7899999999999988777766665 49999999999999998610000
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
-..+.++.|.+||+.+++. ..+. +|...+..++|+|+|++|++++. +.|++||..+++.......+.
T Consensus 85 --------~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~ 154 (723)
T 1xfd_A 85 --------YQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK 154 (723)
T ss_dssp --------SSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB
T ss_pred --------eeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC
Confidence 0001248899999999876 3333 35556889999999999999986 799999999988776665544
Q ss_pred CCE------------------EEEEEecCCCEEEEEeCCC----------------------------------eEEEEe
Q psy9327 164 HYV------------------MCAQFHPTDDIVVSASLDQ----------------------------------TIRVWD 191 (641)
Q Consensus 164 ~~V------------------~sl~fsp~g~~lvSgs~Dg----------------------------------tI~IWD 191 (641)
..+ .+++|+|||+.|++++.|+ +|++||
T Consensus 155 ~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 333 7899999999999988653 799999
Q ss_pred cCCCceeeeccCC------CceeeecccCCCceeee-eeeeeeCCCeeEEEecCC-Ccceeee--cCCcce----EEEEE
Q psy9327 192 ISGLRKKNVAPGM------GKLVLSMKSKHPIWKYC-KPVKYCNPKHTLHICNRK-MEPLCNI--HENTRV----KSGAW 257 (641)
Q Consensus 192 ~~~~~~~~~~~~~------~~~v~s~~~~~~v~~~~-~~l~s~~~d~~I~i~d~~-~~~~~~~--~~~~~I----~sla~ 257 (641)
+.+++....+..+ ...+.++. ..|--... ........+..|.+||.. +...... .+...+ .+++|
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 313 (723)
T 1xfd_A 235 LNGPTHDLEMMPPDDPRMREYYITMVK-WATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF 313 (723)
T ss_dssp SSSSCCCEECCCCCCGGGSSEEEEEEE-ESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE
T ss_pred CCCCceeEEeeCCccCCCccceeEEEE-EeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE
Confidence 9888754444432 22332221 11111110 000112245689999943 3332222 222333 37899
Q ss_pred cCCccEEEEe--cCCe------EEEEEc-CCCCe---Eecccc---ce---EEEEEcCcEEEEEeC-C--CCeEEEEeCC
Q psy9327 258 DESGVFIYTT--SNHI------KYAIVN-GDHGI---IRTLDL---PI---YITKIKGNQVYYLDR-E--CSPHVLRIDP 316 (641)
Q Consensus 258 ~p~g~~L~t~--s~~~------k~~l~~-~~~g~---I~~~d~---p~---~~~~~~g~~v~~~~~-d--g~i~v~~~~~ 316 (641)
+|+|..|+.. ..++ ++++|+ ...+. ++.+.. .+ ..+..++..++..+. + +.+.+|.++.
T Consensus 314 spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 314 SKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred cCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 9999977754 3444 688887 45554 444321 11 246677888865554 4 7899999875
Q ss_pred c
Q psy9327 317 T 317 (641)
Q Consensus 317 ~ 317 (641)
.
T Consensus 394 ~ 394 (723)
T 1xfd_A 394 V 394 (723)
T ss_dssp S
T ss_pred C
Confidence 3
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=4.9e-18 Score=171.26 Aligned_cols=234 Identities=8% Similarity=0.002 Sum_probs=165.5
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-Cccccccccc-ccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-NTLLEKFDEH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-~~~l~~~~~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+..|.+.|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|++.++++++.
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~--------- 104 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDK--------- 104 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEEC---------
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEe---------
Confidence 34667889999999999999999987 78999999998 7776666555 478899999999999998861
Q ss_pred eeecccCCcceeeEEEeeC--CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCC-CeeE
Q psy9327 81 ILESRNEPCLFRIKSVLGD--DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQS-RNCI 156 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~--Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~-~~~i 156 (641)
.. ...|..||..+++ ...+..+ ..+..++|+|++++++ +++.|+.+++|++.. ....
T Consensus 105 -----------------~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 105 -----------------VEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp -----------------TTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred -----------------CCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 02 2345555555555 3444434 3588999999999877 788899999998642 3345
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecC-CCceeeeccCCCceeeecccCCCceeeeeeeeeeCC-----
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDIS-GLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP----- 229 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~-~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~----- 229 (641)
..+..|...+.+++|+|++..++.++ .|+.+++|++. .......+..+...+.++.. +|--.. ++.++.
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~---l~~~~~~~~~~ 241 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP-SPSGDK---VVFVSYDADVF 241 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE-CTTSSE---EEEEEEETTCC
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEE-CCCCCE---EEEEEcCCCCC
Confidence 66777888999999999999877666 59999999986 44455555544444433221 111000 222222
Q ss_pred ------CeeEEEecCCCcc---eeee-cCCcceEEEEEcCCccEEEEecC
Q psy9327 230 ------KHTLHICNRKMEP---LCNI-HENTRVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 230 ------d~~I~i~d~~~~~---~~~~-~~~~~I~sla~~p~g~~L~t~s~ 269 (641)
+..+.+||..... +... .+...+.+++|+|+|..|++++.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred cccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 2679999944322 2222 34567889999999999988764
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=2.1e-17 Score=184.74 Aligned_cols=268 Identities=10% Similarity=0.040 Sum_probs=196.3
Q ss_pred EEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 16 ~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
+|+|++.++++++.|++|.+||..+++.+.++..+.. +.+++|+|+++++++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~------------------------- 197 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIG------------------------- 197 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEE-------------------------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEEC-------------------------
Confidence 4899999999999999999999999999988874333 89999999999999998
Q ss_pred EeeCCCeEEEEEC--CCCeeEEEEccCCCCeEEEEEcc----CCCEEEEEe-CCCeEEEEECCCCeeEEEEcc-------
Q psy9327 96 VLGDDYKIKVWNY--KQRKCIFTLLGHLDYIRTTFFHH----EYPWILSAS-DDQTIRIWYWQSRNCICVLTG------- 161 (641)
Q Consensus 96 ~~s~Dg~I~vWD~--~t~~~~~~~~~h~~~V~~v~fsp----~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~------- 161 (641)
.|++|.+||+ .+++++.++. +...++.++|+| +++++++++ .+++|.+||..+++++.++..
T Consensus 198 ---~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 198 ---RDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp ---TTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred ---CCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 8899999999 8999998888 455679999999 999998888 589999999999999988864
Q ss_pred ---CCC-CEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceee--eccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 162 ---HNH-YVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKN--VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 162 ---h~~-~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~--~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
|.. .+.++.++|++. ++++...+++|.+||..+.+... .++ ++..+..+. ++|--. .-+.++..++.|.
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~-~spdg~--~l~va~~~~~~v~ 349 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGG-WDSSHR--YFMTAANNSNKVA 349 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEE-ECTTSC--EEEEEEGGGTEEE
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCce-ECCCCC--EEEEEecCCCeEE
Confidence 223 789999999765 56778889999999998765433 222 122221111 111000 0134455688999
Q ss_pred Eec-CCCcceeeecC-----CcceEEEEEcCC-ccEEEEec-CCeEEEEEcCCC--------CeEeccccc-----eEEE
Q psy9327 235 ICN-RKMEPLCNIHE-----NTRVKSGAWDES-GVFIYTTS-NHIKYAIVNGDH--------GIIRTLDLP-----IYIT 293 (641)
Q Consensus 235 i~d-~~~~~~~~~~~-----~~~I~sla~~p~-g~~L~t~s-~~~k~~l~~~~~--------g~I~~~d~p-----~~~~ 293 (641)
+|| .+++.+..+.. ......+ ++|+ |..++++. .++.+.+|+.+. ..++.+..+ ...+
T Consensus 350 v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~ 428 (543)
T 1nir_A 350 VIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKT 428 (543)
T ss_dssp EEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC
T ss_pred EEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEc
Confidence 999 45555555542 2223332 4677 66666654 578999998765 345555432 1235
Q ss_pred EEcCcEEEEEeC-------CCCeEEEEeCCcc
Q psy9327 294 KIKGNQVYYLDR-------ECSPHVLRIDPTE 318 (641)
Q Consensus 294 ~~~g~~v~~~~~-------dg~i~v~~~~~~~ 318 (641)
+.++..+++.++ +++|.+|++++.+
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 677889998773 6799999999765
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=4.8e-17 Score=169.57 Aligned_cols=228 Identities=9% Similarity=0.036 Sum_probs=176.3
Q ss_pred CCeEEEEEccCCCeEEE-EeCCCcEEEEECccCcccccccccccC---------eEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGP---------VRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Las-g~~dg~I~iWD~~~~~~l~~~~~h~~~---------V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..+.+++|+|+|+++++ +..++.|.+||..+++.+..+..+... +.+++|+|++.++++++.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------- 160 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-------- 160 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE--------
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec--------
Confidence 45778999999996554 455799999999999888777654432 789999999998777651
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
+.++.|.+||..+++.+..+..+...+.+++|+|++.++++++.++.|.+||..+++.+..+
T Consensus 161 ------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 161 ------------------GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp ------------------SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred ------------------CCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 15889999999999999988866667889999999999999999999999999999988777
Q ss_pred cc----CCCCEEEEEEecCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 160 TG----HNHYVMCAQFHPTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 160 ~~----h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
.. +...+.+++|+|+++.++.++. ++.|.+||..+++....++.....-..+...... -+.+...++.|.
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~-----l~v~~~~~~~v~ 297 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNE-----AYVTHRQAGKVS 297 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTE-----EEEEETTTTEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCE-----EEEEECCCCeEE
Confidence 63 5667889999999997766655 5999999999988776665322111111111110 133455789999
Q ss_pred Eec-CCCcceeeecCCcceEEEEEcCCccEEEEec
Q psy9327 235 ICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTS 268 (641)
Q Consensus 235 i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s 268 (641)
+|| ..++.+..+.....+.+++|+|+|.+++.+.
T Consensus 298 ~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEE
Confidence 999 4566666777777889999999999887765
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.78 E-value=1e-16 Score=166.02 Aligned_cols=249 Identities=6% Similarity=0.021 Sum_probs=170.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcc-cccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~-l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++.
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----------- 102 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVT----------- 102 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECC-----------
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEec-----------
Confidence 444555666 9999999997766665 89999999999987 777777777776699999999999654
Q ss_pred eecccCCcceeeEEEeeCC-C--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCe-EEEEECCCCeeE
Q psy9327 82 LESRNEPCLFRIKSVLGDD-Y--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQT-IRIWYWQSRNCI 156 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-g--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~-I~vWd~~~~~~i 156 (641)
.+ + .|.+||..+++.+..+..+ ....+++|+|+++++ +++..++. |.+|++.....+
T Consensus 103 -----------------~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 103 -----------------GLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp -----------------CSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred -----------------CCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 34 3 9999999999988887754 456899999999844 55566688 999998754332
Q ss_pred ----EEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCCCce---eeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 157 ----CVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISGLRK---KNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 157 ----~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~---~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
.....+...+.+++|+|+|+++ +++..++.|++||+.+++. ...++.. ..+..+. .+|--. .-+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~-~spdg~--~l~v~~~ 240 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIV-VSRDGS--TVYVLTE 240 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEE-ECTTSS--EEEEECS
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEE-ECCCCC--EEEEEEc
Confidence 1222345668999999999865 4555789999999998887 5555432 1111111 111000 0023344
Q ss_pred CCeeEEEecCC-Ccc--eeeecC-----Cc---ceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEecc
Q psy9327 229 PKHTLHICNRK-MEP--LCNIHE-----NT---RVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~--~~~~~~-----~~---~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~~ 286 (641)
.++.|.+||.. +.. +..+.. .. ....++|+|+|.+|+.++ .++.+.+|+.....+...
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 67789999944 322 222211 11 124579999999887665 456888888776655433
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.4e-16 Score=164.55 Aligned_cols=260 Identities=6% Similarity=-0.040 Sum_probs=185.5
Q ss_pred CeEEEEeCCCcEEEEECccCccccccccccc--CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEG--PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~--~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
+++++++.+++|.+||..+++.+..+..... .+.+++|+|+++.+++++ +.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------------------------~~ 54 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------------------------NK 54 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------------------------TT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---------------------------CC
Confidence 4789999999999999999988877753322 578999999998765554 27
Q ss_pred CCeEEEEECCCCeeEEEEcc-C----CCCeEEEEEccCCCEEEEEe------------CCCeEEEEECCCCeeEEEEccC
Q psy9327 100 DYKIKVWNYKQRKCIFTLLG-H----LDYIRTTFFHHEYPWILSAS------------DDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~-h----~~~V~~v~fsp~~~~l~sgs------------~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
++.|.+||..+++.+..+.. + ...+.+++|+|+++++++++ .++.|.+||..+++.+..+..
T Consensus 55 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 133 (337)
T 1pby_B 55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA- 133 (337)
T ss_dssp TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence 89999999999998877753 2 22567899999999888886 579999999999988877764
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCC--ceeeecccCCC-ceeeeeeeeeeCCC---------
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG--KLVLSMKSKHP-IWKYCKPVKYCNPK--------- 230 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~--~~v~s~~~~~~-v~~~~~~l~s~~~d--------- 230 (641)
...+.+++|+|++++++++ ++.|.+||+.+++....++... ..+ ....... ++ .++..+
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~------~~~~~~~~~~~~~~~ 204 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVW------NQHESSGVMATPFYT 204 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT-BCCCBCCCCC------CCCTTTTEEEEEEEE
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc-eeCCCccEEe------eeccCCCceeeeeec
Confidence 4567889999999988877 6899999999988776554321 111 0000000 00 011111
Q ss_pred --------------eeEEEecCCCcceeee---cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE-ecccc---c
Q psy9327 231 --------------HTLHICNRKMEPLCNI---HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII-RTLDL---P 289 (641)
Q Consensus 231 --------------~~I~i~d~~~~~~~~~---~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I-~~~d~---p 289 (641)
..+.+||......... .....+.+++|+|+|.+++++ ++.+.+|+.+++.+ ..+.. |
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~ 282 (337)
T 1pby_B 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSY 282 (337)
T ss_dssp EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCC
T ss_pred cccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCce
Confidence 1578888443322211 234567889999999999988 68899999887754 33322 2
Q ss_pred eE-EEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 290 IY-ITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 290 ~~-~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
.. .+..++..++..+.++.+.+|+..+.+..
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 11 23456788888888999999998876543
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=5.6e-17 Score=182.47 Aligned_cols=266 Identities=6% Similarity=-0.113 Sum_probs=183.4
Q ss_pred CCCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEece----e--eEEee---
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGK----M--IVMAY--- 77 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~----~--~~~~~--- 77 (641)
..+|.+++|+|||++||+++. ||+++||++..++. .++..|. ..+.+++|+|+ ..+++++. . .++.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 568999999999999998887 99999999876654 4444444 68999999999 66665542 1 12112
Q ss_pred -eceeeec---------ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----C
Q psy9327 78 -QGCILES---------RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD----Q 143 (641)
Q Consensus 78 -~~~~~~~---------~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g 143 (641)
.+..... ...|+......+.+.++.+.+||+.+++.......+ . .+++|+|||+++++++.| +
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCe
Confidence 1211111 112223223334444455569999999866555433 3 789999999999988877 7
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC--eEEEEecCCCceeeeccCCCceeeecccCCC---ce
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ--TIRVWDISGLRKKNVAPGMGKLVLSMKSKHP---IW 218 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg--tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~---v~ 218 (641)
.|++||+.+++.. .+.+|.+.+.+++|+|||++|++++.|+ .|++||+.+++.. .+.++...+.+.....+ .|
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 8999999988754 6788999999999999999999888898 9999999998877 66555444332220000 01
Q ss_pred eeee-eeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCC---eEEEEEcCCCCeEecc
Q psy9327 219 KYCK-PVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH---IKYAIVNGDHGIIRTL 286 (641)
Q Consensus 219 ~~~~-~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~---~k~~l~~~~~g~I~~~ 286 (641)
.... -+.++..++.+++|+. +.... .....+.+++|+ +|.++++++.+ ..+++++.+. .++.+
T Consensus 254 spdg~~~~~~~~~g~~~l~~~-g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 254 LPDGRLAVVARREGRSAVFID-GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp CTTSCEEEEEEETTEEEEEET-TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred cCCCcEEEEEEcCCcEEEEEE-CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 1111 1445667889999997 44332 234678899999 88888887754 5677777654 55444
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=7.5e-17 Score=185.45 Aligned_cols=275 Identities=9% Similarity=0.057 Sum_probs=187.8
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|.+++|||| ..++.+. ++.|++||+.+++.. .+..+.+.+.+++|+|||++++++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-------------------- 138 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-------------------- 138 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE--------------------
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE--------------------
Confidence 56999999999 6666553 599999999888654 344567788999999999999996
Q ss_pred ceeeEEEeeCCCeEEEEECCC-----CeeEEEEccCCCC--------------eEEEEEccCCCEEEEEe----------
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQ-----RKCIFTLLGHLDY--------------IRTTFFHHEYPWILSAS---------- 140 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t-----~~~~~~~~~h~~~--------------V~~v~fsp~~~~l~sgs---------- 140 (641)
.|+.|++||+.+ ++.......+... +.+++|+|||++|++++
T Consensus 139 ---------~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~ 209 (706)
T 2z3z_A 139 ---------RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTP 209 (706)
T ss_dssp ---------ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEE
T ss_pred ---------ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEE
Confidence 579999999998 8766554444443 48899999999999987
Q ss_pred -----------------------CCCeEEEEECCCCeeEEEEc--cCCCCEEEEEEecCCCEEEEEeCCC-----eEEEE
Q psy9327 141 -----------------------DDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSASLDQ-----TIRVW 190 (641)
Q Consensus 141 -----------------------~Dg~I~vWd~~~~~~i~~l~--~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI~IW 190 (641)
.+..|++||+.+++...... .|...+.+++|+|+|+.|++++.|+ +|++|
T Consensus 210 ~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~ 289 (706)
T 2z3z_A 210 IVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAY 289 (706)
T ss_dssp EEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred eeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEE
Confidence 45789999999988654442 5778899999999999999988776 99999
Q ss_pred ecCCCceeee-ccC-CCceeeecccCCCceee--ee-eeeeeCCCeeEEEec--CCCcceeeecC-CcceEE-EEEcCCc
Q psy9327 191 DISGLRKKNV-APG-MGKLVLSMKSKHPIWKY--CK-PVKYCNPKHTLHICN--RKMEPLCNIHE-NTRVKS-GAWDESG 261 (641)
Q Consensus 191 D~~~~~~~~~-~~~-~~~~v~s~~~~~~v~~~--~~-~l~s~~~d~~I~i~d--~~~~~~~~~~~-~~~I~s-la~~p~g 261 (641)
|..+++.... ... ....+. ....+.|.. .. -+.++..++.+.+|. .....+..+.. ...+.+ ++|+|+|
T Consensus 290 d~~~g~~~~~~~~~~~~~~~~--~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg 367 (706)
T 2z3z_A 290 DAETGRFVRTLFVETDKHYVE--PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG 367 (706)
T ss_dssp ETTTCCEEEEEEEEECSSCCC--CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS
T ss_pred ECCCCceeeEEEEccCCCeEC--ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC
Confidence 9998833322 211 111110 001112221 11 134555677777776 34444555443 445666 7999999
Q ss_pred cEEEEecC-C----eEEEEEcCCCCeEeccccc--eE--EEEEcCcEEEEEe-CC---CCeEEEEeCCcc
Q psy9327 262 VFIYTTSN-H----IKYAIVNGDHGIIRTLDLP--IY--ITKIKGNQVYYLD-RE---CSPHVLRIDPTE 318 (641)
Q Consensus 262 ~~L~t~s~-~----~k~~l~~~~~g~I~~~d~p--~~--~~~~~g~~v~~~~-~d---g~i~v~~~~~~~ 318 (641)
..|+.++. + ..++.++.+++.++.+... +. .+..++..++... .+ +.+.+|+.++++
T Consensus 368 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 368 TRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 88876553 3 3788888777665544321 21 2344566665443 22 447788877654
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.75 E-value=1.9e-16 Score=163.99 Aligned_cols=261 Identities=11% Similarity=0.114 Sum_probs=172.7
Q ss_pred eEEEEeCCCcEEEEECc-cC--cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 23 WILSSLHNGVIQLWDYR-MN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~-~~--~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++++++.|+.|++||+. ++ +.+.. ..+...+.+++|+|+++++++++ ..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~---------------------------~~ 58 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGV---------------------------RP 58 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEE---------------------------TT
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEee---------------------------cC
Confidence 34455789999999985 33 22333 25777899999999999888887 14
Q ss_pred CCeEEEEECC--CCe--eEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEEC---CCCeeEEEEccCCCCEEEEEE
Q psy9327 100 DYKIKVWNYK--QRK--CIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYW---QSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 100 Dg~I~vWD~~--t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~---~~~~~i~~l~~h~~~V~sl~f 171 (641)
++.|.+|++. +++ .+..+..+. .+..++|+|+++++++++ .++.|.+||+ .+.+.+..+..+ ..+.+++|
T Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ 136 (343)
T 1ri6_A 59 EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI 136 (343)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE
T ss_pred CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE
Confidence 4999999998 554 344555444 788999999999776665 4889999999 444555555544 45889999
Q ss_pred ecCCCEEEEEe-CCCeEEEEecCC-Cceeee----cc-CCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCC---c
Q psy9327 172 HPTDDIVVSAS-LDQTIRVWDISG-LRKKNV----AP-GMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM---E 241 (641)
Q Consensus 172 sp~g~~lvSgs-~DgtI~IWD~~~-~~~~~~----~~-~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~---~ 241 (641)
+|+++.+++++ .|+.|++||+.+ ++.... .. ..+..+..+. .+|--.. -+.++..++.+.+|+... .
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pdg~~--l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV-FHPNEQY--AYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE-ECTTSSE--EEEEETTTTEEEEEESSCTTSC
T ss_pred CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE-ECCCCCE--EEEEeCCCCEEEEEEecCCCCc
Confidence 99999888877 899999999987 543221 11 1122222211 1111000 123445788999999532 1
Q ss_pred c--eeeec---C----CcceEEEEEcCCccEEEEe-cCCeEEEEEcCC--CCeEecc------ccce-EEEEEcCcEEEE
Q psy9327 242 P--LCNIH---E----NTRVKSGAWDESGVFIYTT-SNHIKYAIVNGD--HGIIRTL------DLPI-YITKIKGNQVYY 302 (641)
Q Consensus 242 ~--~~~~~---~----~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~--~g~I~~~------d~p~-~~~~~~g~~v~~ 302 (641)
. ...+. . ...+.+++|+|+|.+++.+ ..++.+.+|+.+ .+..+.+ ..|. ..+..++..++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA 293 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEE
Confidence 1 22221 1 2356689999999888754 478889999876 3433221 1121 224456787888
Q ss_pred Ee-CCCCeEEEEeCC
Q psy9327 303 LD-RECSPHVLRIDP 316 (641)
Q Consensus 303 ~~-~dg~i~v~~~~~ 316 (641)
.+ .++.+.+|.++.
T Consensus 294 ~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 294 AGQKSHHISVYEIVG 308 (343)
T ss_dssp ECTTTCEEEEEEEET
T ss_pred ecCCCCeEEEEEEcC
Confidence 77 579999998874
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=2.4e-16 Score=164.81 Aligned_cols=247 Identities=11% Similarity=0.052 Sum_probs=165.4
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC---CCcEEEEECccCc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH---NGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~---dg~I~iWD~~~~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+...+..++|+|+|+ |++++. ++.|.+||+.+++ .+..+..+...+.+++|+|+++++++++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~----------- 104 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN----------- 104 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE-----------
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe-----------
Confidence 4556778899999999 555544 6899999997665 4445556778889999999999888876
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECC-CC--eeEEEEcc---------CCCCeEEEEEccCCCEEEEEeCCCeEEEEE
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYK-QR--KCIFTLLG---------HLDYIRTTFFHHEYPWILSASDDQTIRIWY 149 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~--~~~~~~~~---------h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd 149 (641)
..++.|.+||+. ++ +.+..+.. +...+.+++|+|++++++++..++.|.+||
T Consensus 105 ----------------~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 105 ----------------YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp ----------------TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred ----------------CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 268999999996 33 33333322 123488999999999777777889999999
Q ss_pred CC-CCeeE--EEEccC-CCCEEEEEEecCCCEEEE-EeCCCeEEEEecCC--Ccee--eeccCCC------ceeeecccC
Q psy9327 150 WQ-SRNCI--CVLTGH-NHYVMCAQFHPTDDIVVS-ASLDQTIRVWDISG--LRKK--NVAPGMG------KLVLSMKSK 214 (641)
Q Consensus 150 ~~-~~~~i--~~l~~h-~~~V~sl~fsp~g~~lvS-gs~DgtI~IWD~~~--~~~~--~~~~~~~------~~v~s~~~~ 214 (641)
+. +++.. ..+..+ ...+..++|+|+|+++++ +..++.|.+||+.. ++.. ....... ..+..+.
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-- 246 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR-- 246 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE--
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE--
Confidence 98 55432 222322 336788999999996555 56789999999874 3321 1111110 1111111
Q ss_pred CCceeeeee--eeeeCCCeeEEEecCC----CcceeeecC-CcceEEEEEcCCccEEEEecC-CeEEEEE--cCCCCeEe
Q psy9327 215 HPIWKYCKP--VKYCNPKHTLHICNRK----MEPLCNIHE-NTRVKSGAWDESGVFIYTTSN-HIKYAIV--NGDHGIIR 284 (641)
Q Consensus 215 ~~v~~~~~~--l~s~~~d~~I~i~d~~----~~~~~~~~~-~~~I~sla~~p~g~~L~t~s~-~~k~~l~--~~~~g~I~ 284 (641)
|..... +.+...++.|.+|+.. ...+..+.. ...+..++|+|+|.+|++++. ++.+.+| +.++|.+.
T Consensus 247 ---~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 247 ---LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ---ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ---ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 111111 2344567899999943 233444443 456889999999999988874 4777777 66667665
Q ss_pred cc
Q psy9327 285 TL 286 (641)
Q Consensus 285 ~~ 286 (641)
.+
T Consensus 324 ~~ 325 (347)
T 3hfq_A 324 LL 325 (347)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=1.1e-16 Score=166.18 Aligned_cols=158 Identities=7% Similarity=-0.025 Sum_probs=125.2
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
++++++++.++++++.+++|.+||..+++.+..+..+. ..+.+++|+|++..+++++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---------------------- 61 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------------------- 61 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE----------------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe----------------------
Confidence 56788899999999999999999999998887776443 2578899999998665544
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCC------CCeEEEEEccCCCEEEEEeCC------------CeEEEEECCCC-
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHL------DYIRTTFFHHEYPWILSASDD------------QTIRIWYWQSR- 153 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~------~~V~~v~fsp~~~~l~sgs~D------------g~I~vWd~~~~- 153 (641)
..++.|.+||..+++.+..+..+. ..+.+++|+|+++++++++.+ +.|.+||+.++
T Consensus 62 -----~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 62 -----NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -----TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -----CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 278999999999999887776432 237889999999999988865 89999999874
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.+..+. +...+.+++|+|+|+ +++++. .|.+||..+++....++
T Consensus 137 ~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 137 EAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp GBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred ccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccc
Confidence 3334444 344688999999999 555544 49999999988776654
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.74 E-value=1.1e-16 Score=184.99 Aligned_cols=275 Identities=8% Similarity=-0.019 Sum_probs=179.4
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccC----------------eEEEEEeCCCCEE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------------VRGICFHNQQPIF 66 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------------V~~i~fsp~~~~l 66 (641)
..+..|...+.+++|||||++|++++ ++.|.+||+.+++.......+... +.+++|||||++|
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l 223 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI 223 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence 45677888999999999999999887 468999999888765544434332 4789999999999
Q ss_pred EEeceee--EEeeeceeeecccCCcc-----eeeEEEeeC--CCeEEEEECCC-CeeEEEEc--cCCCCeEEEEEccCCC
Q psy9327 67 VSGGKMI--VMAYQGCILESRNEPCL-----FRIKSVLGD--DYKIKVWNYKQ-RKCIFTLL--GHLDYIRTTFFHHEYP 134 (641)
Q Consensus 67 ~sgs~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~s~--Dg~I~vWD~~t-~~~~~~~~--~h~~~V~~v~fsp~~~ 134 (641)
++++... ...+. .....|.. ..+...+.. ...|.+||+.+ ++...... .|...+..++| |+|+
T Consensus 224 ~~~~~d~~~~~~~~----~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~ 298 (741)
T 2ecf_A 224 AYARIDESPVPVQK----RYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ 298 (741)
T ss_dssp EEEEEECTTSCEEE----EEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT
T ss_pred EEEEEcCCCCceEe----cCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC
Confidence 9886210 00000 00000000 000000111 12788899998 87655443 47889999999 9999
Q ss_pred EEEEEeC-----CCeEEEEECCCCeeEEEEccCCC----CEEEEEEecCCCEEEEEeCCCeEEEEecC-CCceeeeccCC
Q psy9327 135 WILSASD-----DQTIRIWYWQSRNCICVLTGHNH----YVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGM 204 (641)
Q Consensus 135 ~l~sgs~-----Dg~I~vWd~~~~~~i~~l~~h~~----~V~sl~fsp~g~~lvSgs~DgtI~IWD~~-~~~~~~~~~~~ 204 (641)
+|++++. +..|++||..++++...+..|.. .+.+++|+|+|+++++++.||.+++|.+. .+. ...+..+
T Consensus 299 ~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~ 377 (741)
T 2ecf_A 299 HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG 377 (741)
T ss_dssp EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS
T ss_pred EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec
Confidence 9987654 67899999999988777766553 45689999999999999999988888775 333 5555544
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCe--eEEEecC--CCcceeeecCCcceEEEEEcCCccEEEEecCC----eEEEEE
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKH--TLHICNR--KMEPLCNIHENTRVKSGAWDESGVFIYTTSNH----IKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~--~I~i~d~--~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~----~k~~l~ 276 (641)
...+.+.....|--.. -+.++..++ .+++|+. .+.....+.....+.+++|+|+|.+++....+ ..+.++
T Consensus 378 ~~~v~~~~~~s~dg~~--l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~ 455 (741)
T 2ecf_A 378 NWSVDELLAVDEKAGL--AYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELF 455 (741)
T ss_dssp SSCEEEEEEEETTTTE--EEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred ceEEEeEeEEeCCCCE--EEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence 3333322111110000 022333444 7888873 34445555556678899999999988866432 567777
Q ss_pred cCCCCeEecc
Q psy9327 277 NGDHGIIRTL 286 (641)
Q Consensus 277 ~~~~g~I~~~ 286 (641)
+.+.+.++.+
T Consensus 456 ~~~~~~~~~l 465 (741)
T 2ecf_A 456 RANGEKIATL 465 (741)
T ss_dssp ETTSCEEECS
T ss_pred EcCCCeEEEe
Confidence 7666655544
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=3.1e-16 Score=180.31 Aligned_cols=278 Identities=9% Similarity=0.019 Sum_probs=178.6
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECcc-----CcccccccccccC--------------eEEEEEeCCCC
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRM-----NTLLEKFDEHEGP--------------VRGICFHNQQP 64 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~-----~~~l~~~~~h~~~--------------V~~i~fsp~~~ 64 (641)
.+..+.+.+.+++|||||++|+++ .|+.|.+||+.+ ++.......+... +.+++|+|||+
T Consensus 115 ~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 445567788999999999999985 679999999998 7665444434333 48999999999
Q ss_pred EEEEeceeeEEeeeceeeecc-cCCc--ceeeEE--EeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEE
Q psy9327 65 IFVSGGKMIVMAYQGCILESR-NEPC--LFRIKS--VLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWIL 137 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~-~~~~--~~~~~~--~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~ 137 (641)
+|++++............... ..+. ...+.. ....+..|.+||+.+++...... .|...+..++|+|++++++
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 999886100000000000000 0000 000000 11245689999999998655442 4778899999999999999
Q ss_pred EEeCCC-----eEEEEECCCCeeEEEEc--cCCC---CEEEEEEec--CCCEEEEEeCCCeEEEEecC-CCceeeeccCC
Q psy9327 138 SASDDQ-----TIRIWYWQSRNCICVLT--GHNH---YVMCAQFHP--TDDIVVSASLDQTIRVWDIS-GLRKKNVAPGM 204 (641)
Q Consensus 138 sgs~Dg-----~I~vWd~~~~~~i~~l~--~h~~---~V~sl~fsp--~g~~lvSgs~DgtI~IWD~~-~~~~~~~~~~~ 204 (641)
+++.|+ .|++||..+++....+. .+.. .+.++.|+| +|.++++++.|+.+++|++. ++.....+..+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 988775 99999999984333332 2222 246789999 99999999999999999886 55555555544
Q ss_pred CceeeecccCCCceeeeeeeeeeCCCe----eEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCC----eEEEEE
Q psy9327 205 GKLVLSMKSKHPIWKYCKPVKYCNPKH----TLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH----IKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~~l~s~~~d~----~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~----~k~~l~ 276 (641)
...+.+.....|--.. -+.++..++ .|..||........+.+...+.+++|+|+|.+++.+..+ ..+.+|
T Consensus 354 ~~~v~~~~~~spdg~~--l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~ 431 (706)
T 2z3z_A 354 EWEVTNFAGFDPKGTR--LYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVT 431 (706)
T ss_dssp SSCEEEEEEECTTSSE--EEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEE
T ss_pred CeEEEeeeEEcCCCCE--EEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEE
Confidence 3333321111111000 012233333 667777444445555566778999999999988766432 568899
Q ss_pred cCCCCeEe
Q psy9327 277 NGDHGIIR 284 (641)
Q Consensus 277 ~~~~g~I~ 284 (641)
+.+++...
T Consensus 432 d~~~~~~~ 439 (706)
T 2z3z_A 432 NIGKGSHT 439 (706)
T ss_dssp ESSSCEEE
T ss_pred ECCCCeEe
Confidence 87777633
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=8.3e-17 Score=185.41 Aligned_cols=244 Identities=11% Similarity=0.089 Sum_probs=169.2
Q ss_pred eeccCCC---CeEEEEEccCCCeEEEEeCC---------CcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEe
Q psy9327 4 KFETKSA---RVKGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 4 ~~~~H~~---~V~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sg 69 (641)
.+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. +.....|...+..++|||||++|+.+
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~ 131 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFI 131 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEE
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEE
Confidence 3445554 49999999999999999874 7888999998875 33333455668999999999999998
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe------------------EEEEEcc
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI------------------RTTFFHH 131 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V------------------~~v~fsp 131 (641)
+ ++.|++||..+++.......+...+ .+++|+|
T Consensus 132 ~-----------------------------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 132 F-----------------------------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp E-----------------------------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred E-----------------------------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 6 4799999999988777666554433 7899999
Q ss_pred CCCEEEEEeCCC----------------------------------eEEEEECCCCeeEEEEccC------CCCEEEEEE
Q psy9327 132 EYPWILSASDDQ----------------------------------TIRIWYWQSRNCICVLTGH------NHYVMCAQF 171 (641)
Q Consensus 132 ~~~~l~sgs~Dg----------------------------------~I~vWd~~~~~~i~~l~~h------~~~V~sl~f 171 (641)
||++|++++.|+ +|++||+.++++...+..| ...+.+++|
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 262 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW 262 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEE
Confidence 999999887653 8999999988866666654 678999999
Q ss_pred ecCCCEEEEEeC----CCeEEEEecCCCceeeeccCC-CceeeecccCCCceeeeee-ee--eeCCCe------eEEEec
Q psy9327 172 HPTDDIVVSASL----DQTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHPIWKYCKP-VK--YCNPKH------TLHICN 237 (641)
Q Consensus 172 sp~g~~lvSgs~----DgtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~v~~~~~~-l~--s~~~d~------~I~i~d 237 (641)
+|||+++++.+. +..|++||+.+++.......+ ...+.. ....+.|..... ++ +...++ .+.+||
T Consensus 263 SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 263 ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR-QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC-CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEec-cCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 999998877653 368999999988766554321 111110 001223322221 22 123344 577787
Q ss_pred -CCCcc---eeeecC-CcceEE-EEEcCCccEEEEecCC---eEEEEEc
Q psy9327 238 -RKMEP---LCNIHE-NTRVKS-GAWDESGVFIYTTSNH---IKYAIVN 277 (641)
Q Consensus 238 -~~~~~---~~~~~~-~~~I~s-la~~p~g~~L~t~s~~---~k~~l~~ 277 (641)
..... ...+.. ...+.. ++|+|+|..|+..+.+ +...+|.
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 33333 334432 344554 6999999999866544 4555554
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=1.9e-16 Score=159.60 Aligned_cols=221 Identities=7% Similarity=-0.047 Sum_probs=155.9
Q ss_pred EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEE
Q psy9327 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKV 105 (641)
Q Consensus 26 sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~v 105 (641)
.++.|++|++||..+++.. .+..|.+.|.+++|+|+++++++++ ++.|.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-----------------------------~~~i~~ 66 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-----------------------------EGLLYR 66 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-----------------------------TTEEEE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-----------------------------CCeEEE
Confidence 3457899999999988765 4557899999999999999999974 789999
Q ss_pred EECCC-CeeEEEEccC-CCCeEEEEEccCCCEEEEEe--CCCeEEEE--ECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 106 WNYKQ-RKCIFTLLGH-LDYIRTTFFHHEYPWILSAS--DDQTIRIW--YWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 106 WD~~t-~~~~~~~~~h-~~~V~~v~fsp~~~~l~sgs--~Dg~I~vW--d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
||+.+ ++.......| ...+.+++|+|+++++++++ .++...+| +..++. ...+..+ ..+.+++|+|+++.++
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFT 144 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEE
Confidence 99999 8877766666 47789999999999999998 33455555 545554 3444434 3589999999999877
Q ss_pred -EEeCCCeEEEEecC--CCceeeeccCCCceeeecccCCCceeeeeeee-eeCCCeeEEEecC--CCcceeeec-CCcce
Q psy9327 180 -SASLDQTIRVWDIS--GLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK-YCNPKHTLHICNR--KMEPLCNIH-ENTRV 252 (641)
Q Consensus 180 -Sgs~DgtI~IWD~~--~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~-s~~~d~~I~i~d~--~~~~~~~~~-~~~~I 252 (641)
+++.|+.+++|++. ++.. ..+..+...+.++.. +|--. .++ ++..++.+.+|+. .......+. +...+
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-s~dg~---~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 219 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDY-SPDGR---WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGD 219 (297)
T ss_dssp EEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEE-CTTSS---EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEE
T ss_pred EEECCCCceEEEEEECCCCcc-eEcccCCCccccceE-CCCCC---EEEEEecCCCCccEEEECCCCCCcEEEecCCccc
Confidence 78899999999964 3332 333333333333221 11000 022 3335777888872 344444444 35678
Q ss_pred EEEEEcCCccEEEEecCC-----------eEEEEEcCCCCeE
Q psy9327 253 KSGAWDESGVFIYTTSNH-----------IKYAIVNGDHGII 283 (641)
Q Consensus 253 ~sla~~p~g~~L~t~s~~-----------~k~~l~~~~~g~I 283 (641)
.+++|+|+|.+|+.++.+ ..+++|+.+++..
T Consensus 220 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 899999999999888754 6788898776643
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=4.1e-16 Score=187.68 Aligned_cols=297 Identities=10% Similarity=0.018 Sum_probs=208.5
Q ss_pred CCCCeEEEEEc-cCCCeEEEEeCCCcEEEEECccCccccccccccc-CeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFH-PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-PVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fs-pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
|.+.+.+++|| |||+++++++ ++.|.+|+...++.. .+..|.+ .+.+++|+ ++..+++++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s--------------- 355 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGT--------------- 355 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEE---------------
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEE---------------
Confidence 55679999999 9999999888 789999999877644 3556777 89999999 999999987
Q ss_pred cCCcceeeEEEeeCCCeEE-EEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIK-VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~-vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.++.+. +||..+++.. .+.+|...+..++|+|++++|++++.|+.|++||+.+++....+.+|.+
T Consensus 356 -------------~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 356 -------------REGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 421 (1045)
T ss_dssp -------------TTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred -------------CCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence 678888 9999887654 4447888999999999999999999999999999999998888878999
Q ss_pred CEEEEEEecCCCEEEEEeCCC----------eEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQ----------TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~Dg----------tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
.+.+++|+|||++|++++.++ .|++||+.+++ ...+..+...+.++.. .|--. .+...+.++...
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~-spdG~---~l~~~s~~~~~~ 496 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAF-DADSK---NLYYLSYRSLDP 496 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEE-CTTSC---EEEEEESCCCCC
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceE-cCCCC---EEEEEecccCCc
Confidence 999999999999998887754 99999999877 4444444333322110 00000 011111111111
Q ss_pred E------------------------------------------ecCCC--cceeeec-CCcceEEEEEcCCccEEEE---
Q psy9327 235 I------------------------------------------CNRKM--EPLCNIH-ENTRVKSGAWDESGVFIYT--- 266 (641)
Q Consensus 235 i------------------------------------------~d~~~--~~~~~~~-~~~~I~sla~~p~g~~L~t--- 266 (641)
. |+..+ ..+..+. +...+.+++++|+|.++++
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~ 576 (1045)
T 1k32_A 497 SPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPV 576 (1045)
T ss_dssp EECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCC
T ss_pred CcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecc
Confidence 1 11111 1112222 3466889999999987775
Q ss_pred ----------ecCCeEEEEEcCCCCeEeccccce--EEEEEcCcEEEEEeCCCCeEEEEeCCcc-----hhh-----hH-
Q psy9327 267 ----------TSNHIKYAIVNGDHGIIRTLDLPI--YITKIKGNQVYYLDRECSPHVLRIDPTE-----FKF-----KL- 323 (641)
Q Consensus 267 ----------~s~~~k~~l~~~~~g~I~~~d~p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~-----~~~-----k~- 323 (641)
.....++++|+..++....+..++ ..+..+|..++..+.+ .+++|+..+.+ ..+ +.
T Consensus 577 ~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~ 655 (1045)
T 1k32_A 577 HGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKPEDERTVETDKRPLVSS 655 (1045)
T ss_dssp CCSHHHHHHCCCCCEEEEEEETTTCCEEEEEEEEEEEEECTTSCEEEEEETT-SCEEEEESSCTTSCEECCCCSSCEEEE
T ss_pred cCcccccccccCCCceEEEEECCCCcEEEeecCcceEEECCCCCEEEEEcCC-cEEEEeCccCcccCCccccceeEEEEC
Confidence 124678888888887766543322 2344568888887766 89999998765 111 11
Q ss_pred --HHhccchHHHHHHHhcCcc
Q psy9327 324 --ALINHKYEEVLHIVRNSRL 342 (641)
Q Consensus 324 --~l~~~~~~~~l~~~~~s~l 342 (641)
+-....|+++.+++++..+
T Consensus 656 ~~~~~~~~~~~~~~~~~~~y~ 676 (1045)
T 1k32_A 656 IHEEFLQMYDEAWKLARDNYW 676 (1045)
T ss_dssp HHHHHHHHHHHHHHHHHHHCS
T ss_pred hhHHHHHHHHHHHHHHHHhhc
Confidence 1122345677777776544
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=3.9e-16 Score=179.93 Aligned_cols=278 Identities=6% Similarity=0.027 Sum_probs=176.2
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCccccccccccc---CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG---PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~---~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+++|+|+|.++++ +.||+|++||..+++....+..|.. .+.+++|||||++|++++.... .|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~-~~------------- 84 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSK-LW------------- 84 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEE-CS-------------
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCce-eE-------------
Confidence 7899999965554 5699999999999987666665554 4899999999999998861000 00
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-ccCCCCE---
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TGHNHYV--- 166 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~h~~~V--- 166 (641)
-.+.++.|++||+.+++.+.... -.+.+..++|||||++|++++ |+.|++||..++++.... .++...|
T Consensus 85 -----~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 85 -----RYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp -----SSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred -----EeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 00126899999999998631111 135688899999999999986 789999999888765432 2333323
Q ss_pred --------------EEEEEecCCCEEEEEeCCC----------------------------------eEEEEecCCCcee
Q psy9327 167 --------------MCAQFHPTDDIVVSASLDQ----------------------------------TIRVWDISGLRKK 198 (641)
Q Consensus 167 --------------~sl~fsp~g~~lvSgs~Dg----------------------------------tI~IWD~~~~~~~ 198 (641)
.+++|+|||+.|++++.|. +|++||+.+++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 4899999999999988653 7899999987653
Q ss_pred ---e-----eccCCCceeeecccCCCceeeeeeeeeeC--CCeeEEEec----CCC-cceeee-----cCCcceE-----
Q psy9327 199 ---N-----VAPGMGKLVLSMKSKHPIWKYCKPVKYCN--PKHTLHICN----RKM-EPLCNI-----HENTRVK----- 253 (641)
Q Consensus 199 ---~-----~~~~~~~~v~s~~~~~~v~~~~~~l~s~~--~d~~I~i~d----~~~-~~~~~~-----~~~~~I~----- 253 (641)
. .+.++...+.++... |--.+.+. .... ....|.+|| ... ...... .+...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~S-pD~~~~~~-~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWV-TDERVCLQ-WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEES-SSSEEEEE-EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCC
T ss_pred ceeEccCCccCCCCcceEEEeEEe-CCCeEEEE-EeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCC
Confidence 1 122344444443221 11111111 1111 224577888 332 222222 2234454
Q ss_pred EEEEcCCccEEEE--ecC--CeEEEEEcCCCCeEeccccc---e--EEEEEcCcEEEEEeC-----CCCeEEEEeCC
Q psy9327 254 SGAWDESGVFIYT--TSN--HIKYAIVNGDHGIIRTLDLP---I--YITKIKGNQVYYLDR-----ECSPHVLRIDP 316 (641)
Q Consensus 254 sla~~p~g~~L~t--~s~--~~k~~l~~~~~g~I~~~d~p---~--~~~~~~g~~v~~~~~-----dg~i~v~~~~~ 316 (641)
+.+|+|+|..++. ... ...+++|+.+++..+.+... + ..+. +++.++..+. ++...+|.++.
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 7899999986554 333 45677887666554433211 1 1122 5666655554 47888998764
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.69 E-value=1.4e-15 Score=183.10 Aligned_cols=161 Identities=16% Similarity=0.125 Sum_probs=141.0
Q ss_pred eeccCCC-CeEEEEEccCCCeEEEEeCCCcEE-EEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSA-RVKGLSFHPKRPWILSSLHNGVIQ-LWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~-~V~~l~fspdg~~Lasg~~dg~I~-iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+..|.+ .+.+++|+ ||+.+++++.++.+. +||..+++.. .+..|...+.+++|+|+++++++++
T Consensus 331 ~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~----------- 397 (1045)
T 1k32_A 331 KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVAN----------- 397 (1045)
T ss_dssp ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEE-----------
T ss_pred EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEEC-----------
Confidence 4556777 89999999 999999999888888 8998877543 3447888999999999999999997
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC----------eEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ----------TIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg----------~I~vWd~~ 151 (641)
.++.|++||+.+++....+.+|.+.+.+++|+|+|++|++++.++ .|++||+.
T Consensus 398 -----------------~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 398 -----------------DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp -----------------TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred -----------------CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 899999999999998888878999999999999999998887654 99999999
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
+++ +..+.+|...+.+++|+|+|+.|++++.++..++|+....
T Consensus 461 ~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 461 GRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp TTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred CCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 887 7788889999999999999999999999988888886543
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=1.4e-15 Score=156.86 Aligned_cols=244 Identities=7% Similarity=-0.056 Sum_probs=168.4
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+.+++|+|+|++++ ++..++.|.+||..+++.+..+.. |...+.+++|+|++.++++++.....
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~--------- 105 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL--------- 105 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---------
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc---------
Confidence 588999999998664 555689999999999887766643 23367789999999988887410000
Q ss_pred ccCCcceeeEEEee--CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLG--DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s--~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.+ ..- .++.|.+||..+++.+..+.. ...+.+++|+|++++++++ ++.|++||..+++.+..+..+
T Consensus 106 --~~-------~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 106 --EL-------THFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp --CS-------SCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECST
T ss_pred --cc-------ccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecc
Confidence 00 000 368999999999998887764 4567889999999988887 689999999999988777654
Q ss_pred CCCEEEEEEecCCCEEEEEeC-CC-----------------------eEEEEecCCCceeee-ccCCCceeeecccCCCc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASL-DQ-----------------------TIRVWDISGLRKKNV-APGMGKLVLSMKSKHPI 217 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~-Dg-----------------------tI~IWD~~~~~~~~~-~~~~~~~v~s~~~~~~v 217 (641)
... ..+.|+|++..++.++. ++ .|.+||..+++.... ...+...+.++.. .|-
T Consensus 174 ~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-s~d 251 (337)
T 1pby_B 174 SWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV-NPA 251 (337)
T ss_dssp TTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEE-CTT
T ss_pred ccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEE-CCC
Confidence 311 12378999886654443 22 468999998776411 1111111111110 110
Q ss_pred eeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCe
Q psy9327 218 WKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282 (641)
Q Consensus 218 ~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~ 282 (641)
-.. +..+ ++.|.+|| ..++....+.....+.+++|+|+|.++++++.++.+.+|+.+++.
T Consensus 252 g~~---l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 252 KTR---AFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SSE---EEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCE---EEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 000 2222 68899999 445555666666778899999999999998888999999877654
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=6.9e-15 Score=155.70 Aligned_cols=280 Identities=9% Similarity=0.037 Sum_probs=184.7
Q ss_pred eeeccCCCCeEE-----EEEccCCCeEEEEeC-CCc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeE
Q psy9327 3 TKFETKSARVKG-----LSFHPKRPWILSSLH-NGV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74 (641)
Q Consensus 3 ~~~~~H~~~V~~-----l~fspdg~~Lasg~~-dg~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~ 74 (641)
+.+..|...... .+|||||++|+.++. +|. |.+||..+++.......+...+.+++|+|+++.|+.++
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~---- 99 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK---- 99 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE----
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe----
Confidence 456666666666 889999999998887 674 88889888887666666666666788999999999997
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEE--EccCCCEEEEE-------------
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF--FHHEYPWILSA------------- 139 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~--fsp~~~~l~sg------------- 139 (641)
.++.|.+||+.+++....+..+.+.+.... ++|++.+++..
T Consensus 100 ------------------------~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 100 ------------------------DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp ------------------------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ------------------------CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 788999999999988777776766665444 48999988743
Q ss_pred ---------eCCCeEEEEECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCC------CeEEEEecCCCceeeeccC
Q psy9327 140 ---------SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLD------QTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 140 ---------s~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~D------gtI~IWD~~~~~~~~~~~~ 203 (641)
+.+..|.+||+.+++.. .+..+...+..+.|+| +|..|+.++.+ ..|.++|..+.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred chhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 24578999999988644 4445777899999999 99988877763 3788888776554433332
Q ss_pred CC-ceeeecccCCCceeeeee-eee-----eCCCeeEEEecCCCcceeeecC-Cc------ceEEEEEcCCccEEEEe--
Q psy9327 204 MG-KLVLSMKSKHPIWKYCKP-VKY-----CNPKHTLHICNRKMEPLCNIHE-NT------RVKSGAWDESGVFIYTT-- 267 (641)
Q Consensus 204 ~~-~~v~s~~~~~~v~~~~~~-l~s-----~~~d~~I~i~d~~~~~~~~~~~-~~------~I~sla~~p~g~~L~t~-- 267 (641)
.. ..+.. +.|..... ++. +..+..|.+||........+.. .. .....+|+|+|..|+..
T Consensus 235 ~~~~~~~~-----~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 235 AEGESCTH-----EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp CTTEEEEE-----EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred CCCccccc-----ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 21 12322 11211111 111 1122359999944332222211 11 01123799999888854
Q ss_pred -------cCCeEEEEEcCCCCeEeccccce----------------EEEEEcCcEEE-EEeCCCCeEEEEeCC
Q psy9327 268 -------SNHIKYAIVNGDHGIIRTLDLPI----------------YITKIKGNQVY-YLDRECSPHVLRIDP 316 (641)
Q Consensus 268 -------s~~~k~~l~~~~~g~I~~~d~p~----------------~~~~~~g~~v~-~~~~dg~i~v~~~~~ 316 (641)
..+..+++|+.+.+.++.+.... ..+..+|..++ +.+++|...+|.++-
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp -------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 45668999998888765442211 13556666554 455788888887664
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=2.1e-14 Score=150.98 Aligned_cols=247 Identities=9% Similarity=0.047 Sum_probs=160.8
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC----CcEEEEECcc--Cc--ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN----GVIQLWDYRM--NT--LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d----g~I~iWD~~~--~~--~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
|...+..++|+|+|++|++++.+ |.|.+|++.. ++ .+.....+......+++ ++.++++++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~--------- 116 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTAN--------- 116 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEE---------
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEE---------
Confidence 56677889999999999998875 8999999865 43 23333345566778888 777777765
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE------Ecc--------CCCCeEEEEEccCCCEEEEEe-CCCe
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT------LLG--------HLDYIRTTFFHHEYPWILSAS-DDQT 144 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~------~~~--------h~~~V~~v~fsp~~~~l~sgs-~Dg~ 144 (641)
..++.|.+|++.....+.. ..+ +...+.+++|+|+++++++++ .++.
T Consensus 117 ------------------~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 117 ------------------YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp ------------------TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ------------------CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 2789999999975432211 111 123458899999999665554 5899
Q ss_pred EEEEECCCCee-------------EEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCcee--eecc---CCC
Q psy9327 145 IRIWYWQSRNC-------------ICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKK--NVAP---GMG 205 (641)
Q Consensus 145 I~vWd~~~~~~-------------i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~--~~~~---~~~ 205 (641)
|.+|++..... ......+...+..++|+|+|+++++++ .+++|.+||+.+++.. .... ...
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 99998875431 122234456688999999999887777 6899999999876432 2121 111
Q ss_pred ceeeecccCCCceeeeeeeeeeCC-CeeEEEecCC---Cc--ceeeecCCcceEEEEEcCCccEEEEec-CCeEEEE--E
Q psy9327 206 KLVLSMKSKHPIWKYCKPVKYCNP-KHTLHICNRK---ME--PLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAI--V 276 (641)
Q Consensus 206 ~~v~s~~~~~~v~~~~~~l~s~~~-d~~I~i~d~~---~~--~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l--~ 276 (641)
.....+. .+|--.. -+.+... ++.+.+|+.. +. .+..+..+..+.+++|+|+|.+|++++ .++.+.+ +
T Consensus 259 ~~~~~i~-~spdg~~--l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 259 QGSGDIH-LSPDGKY--LYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEEE-ECTTSSE--EEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCcccEE-ECCCCCE--EEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 1111111 0110000 0233344 6889999842 22 344444456788999999999998887 5566666 5
Q ss_pred cCCCCeEecc
Q psy9327 277 NGDHGIIRTL 286 (641)
Q Consensus 277 ~~~~g~I~~~ 286 (641)
+.++|.+..+
T Consensus 336 d~~~g~~~~~ 345 (361)
T 3scy_A 336 DQATGLLTDI 345 (361)
T ss_dssp CTTTCCEEEC
T ss_pred ECCCCcEeec
Confidence 6667766644
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=1.8e-14 Score=167.01 Aligned_cols=282 Identities=9% Similarity=0.087 Sum_probs=173.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccC-----eEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-----VRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~-----V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....+++|+|||.+++++ ||+|++||+.+++....+..|... ...++|||||++++.++.......
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r------- 87 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR------- 87 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS-------
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE-------
Confidence 346689999999988886 899999999999876666666532 244889999999998861000000
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE-EccCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHN 163 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-l~~h~ 163 (641)
-+..+.+.+||+.+++.. .+..|.+.+...+|||||+.|+.++ |+.|++||..+++.... ..++.
T Consensus 88 ------------~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 88 ------------HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp ------------SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBT
T ss_pred ------------EccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCc
Confidence 001267889999999854 4667888999999999999999885 68999999988775432 23443
Q ss_pred CCE-----------------EEEEEecCCCEEEEEeCCC------------------------------------eEEEE
Q psy9327 164 HYV-----------------MCAQFHPTDDIVVSASLDQ------------------------------------TIRVW 190 (641)
Q Consensus 164 ~~V-----------------~sl~fsp~g~~lvSgs~Dg------------------------------------tI~IW 190 (641)
..+ .++.|||||+.|+.++.|. ++++|
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 333 3589999999999886443 47777
Q ss_pred ecCC---C---ceeeecc-----CCCceeeecccCCCcee-eeeeeeeeCCCeeEEEec-CCCc------ceee---ecC
Q psy9327 191 DISG---L---RKKNVAP-----GMGKLVLSMKSKHPIWK-YCKPVKYCNPKHTLHICN-RKME------PLCN---IHE 248 (641)
Q Consensus 191 D~~~---~---~~~~~~~-----~~~~~v~s~~~~~~v~~-~~~~l~s~~~d~~I~i~d-~~~~------~~~~---~~~ 248 (641)
|+.+ + +...... ++..++.++... |--. +...+.....+..|.+|| ..+. .... -.+
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws-pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA-TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE-ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred ECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe-CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 8777 5 2222211 133333332111 1000 001111223445788998 3333 1111 112
Q ss_pred Ccce-----EEEEEcCCccEEE-EecC---CeEEEEEcCCCCeEecccc---c-eEEEEEcCcEEEEEeCC-----CCeE
Q psy9327 249 NTRV-----KSGAWDESGVFIY-TTSN---HIKYAIVNGDHGIIRTLDL---P-IYITKIKGNQVYYLDRE-----CSPH 310 (641)
Q Consensus 249 ~~~I-----~sla~~p~g~~L~-t~s~---~~k~~l~~~~~g~I~~~d~---p-~~~~~~~g~~v~~~~~d-----g~i~ 310 (641)
...+ .+.+|+|||..++ ..+. ...+++++.+.+..+.+.. . ......+++.++..+.. +...
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBE
T ss_pred CceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeE
Confidence 3333 3688999999876 5553 3678888877766553321 1 11222446665554432 3445
Q ss_pred EEEeC
Q psy9327 311 VLRID 315 (641)
Q Consensus 311 v~~~~ 315 (641)
+|.++
T Consensus 393 ly~v~ 397 (740)
T 4a5s_A 393 LYKIQ 397 (740)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55444
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.2e-13 Score=143.83 Aligned_cols=239 Identities=10% Similarity=0.048 Sum_probs=172.1
Q ss_pred CCCeEEEEEccCCCeEEEEeCC------------------------CcEEEEECccCccccccc-ccccCeEEEEEeCCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHN------------------------GVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQ 63 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~d------------------------g~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~ 63 (641)
-+.+.+++++|+|+++++...+ ++|.+||..+++.+..+. .+-....+++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999998888777 479999998888776554 344678999999999
Q ss_pred CEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEE---------ccCCCCeEEEEEcc-C
Q psy9327 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTL---------LGHLDYIRTTFFHH-E 132 (641)
Q Consensus 64 ~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~---------~~h~~~V~~v~fsp-~ 132 (641)
.++++.. .++.|++||..... .+..+ .++.....+++|+| +
T Consensus 103 ~l~v~d~----------------------------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~ 154 (329)
T 3fvz_A 103 NYWVTDV----------------------------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST 154 (329)
T ss_dssp CEEEEET----------------------------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT
T ss_pred CEEEEEC----------------------------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC
Confidence 9887776 78999999976442 56666 34556789999999 8
Q ss_pred CCEEEEEe-CCCeEEEEECCCCeeEEEEcc----------CCCCEEEEEEecC-CCEEEEEeCCCeEEEEecCCCceeee
Q psy9327 133 YPWILSAS-DDQTIRIWYWQSRNCICVLTG----------HNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 133 ~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~----------h~~~V~sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
+.++++.+ .++.|++|| .+++.+..+.. +......++++|+ +.++++.+.+++|++||..+++....
T Consensus 155 g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp CCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 88888886 799999999 66777777642 3344899999998 77888888899999999998877776
Q ss_pred cc--CCCceeeecccCCC--ceeeeee-eeeeCCCeeEEEec-CCCcceeeec----CCcceEEEEEcCCccEEEEecCC
Q psy9327 201 AP--GMGKLVLSMKSKHP--IWKYCKP-VKYCNPKHTLHICN-RKMEPLCNIH----ENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 201 ~~--~~~~~v~s~~~~~~--v~~~~~~-l~s~~~d~~I~i~d-~~~~~~~~~~----~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
+. .++..+.++.. +| ++..... ..+....+.+.+|| ..+..+..+. .......++++|+|..+++...+
T Consensus 234 ~~~~~~~~~~~~~~~-~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 234 IKHASFGRNVFAISY-IPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp ECCTTTTTCEEEEEE-ETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred EeccccCCCcceeee-cCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 63 23333332211 12 1111111 22333566899999 5566666553 34567889999999666665555
Q ss_pred eEEEEEc
Q psy9327 271 IKYAIVN 277 (641)
Q Consensus 271 ~k~~l~~ 277 (641)
+++..|+
T Consensus 313 ~~I~~~~ 319 (329)
T 3fvz_A 313 NTVWKFT 319 (329)
T ss_dssp CCEEEEE
T ss_pred CEEEEEe
Confidence 5666554
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=2.3e-13 Score=138.03 Aligned_cols=237 Identities=13% Similarity=0.168 Sum_probs=166.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc------ccccCeEEEEEe-CCCCEEEEeceeeEEeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD------EHEGPVRGICFH-NQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~------~h~~~V~~i~fs-p~~~~l~sgs~~~~~~~~~ 79 (641)
+|-..+.+++++|++.++++...++.|.+||.. ++.+..+. .+...+.++++. +++.++++..
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~--------- 96 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER--------- 96 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC---------
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcC---------
Confidence 455789999999999988888889999999976 55555553 244678999995 6777666663
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
+.++.|.+|| .+++.+..+.. +...+.+++++|++.++++.+.++.|.+||.. ++.+..
T Consensus 97 ------------------~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 156 (286)
T 1q7f_A 97 ------------------SPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHK 156 (286)
T ss_dssp ------------------GGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ------------------CCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence 1388999999 66777777743 45678999999999988888889999999964 555555
Q ss_pred Ec--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 159 LT--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 159 l~--~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+. ++...+.+++++|+|.++++.+.++.|++||... +....+...+
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g------------------------------- 204 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEG------------------------------- 204 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTT-------------------------------
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCC-------------------------------
Confidence 53 4566799999999999888888899999999754 2222221100
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEecCCe-EEEEEcCCCCeEecccc------ceEEEEEcCcEEEEEeCCCCe
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI-KYAIVNGDHGIIRTLDL------PIYITKIKGNQVYYLDRECSP 309 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~-k~~l~~~~~g~I~~~d~------p~~~~~~~g~~v~~~~~dg~i 309 (641)
....+..++++++|.++++...++ .+.+|+.+...+..+.. |..+.-.....++..+.++++
T Consensus 205 -----------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v 273 (286)
T 1q7f_A 205 -----------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRL 273 (286)
T ss_dssp -----------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEE
T ss_pred -----------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeE
Confidence 013455678888887666666554 78888765555554422 222222223334444678888
Q ss_pred EEEEeCC
Q psy9327 310 HVLRIDP 316 (641)
Q Consensus 310 ~v~~~~~ 316 (641)
++|+...
T Consensus 274 ~v~~~~~ 280 (286)
T 1q7f_A 274 YIYRYVQ 280 (286)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 8887654
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=8.5e-14 Score=145.27 Aligned_cols=258 Identities=10% Similarity=0.048 Sum_probs=162.5
Q ss_pred CCcEEEEECc--cCcccc-cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEE
Q psy9327 30 NGVIQLWDYR--MNTLLE-KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVW 106 (641)
Q Consensus 30 dg~I~iWD~~--~~~~l~-~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vW 106 (641)
++.|.+|+++ +++... ....+...+..++|+|+++ +++++. .+.++.|.+|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~-------------------------~~~~~~v~~~ 68 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDK-------------------------EDDEGGIAAW 68 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEE-------------------------ETTEEEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEe-------------------------cCCCceEEEE
Confidence 5668888775 344322 2334567778899999999 555541 0136899999
Q ss_pred ECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCC-C--eeEEEEcc---------CCCCEEEEEE
Q psy9327 107 NYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQS-R--NCICVLTG---------HNHYVMCAQF 171 (641)
Q Consensus 107 D~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~-~--~~i~~l~~---------h~~~V~sl~f 171 (641)
|+.+++ .+..+..+...+..++|+|+++++++++ .+++|.+||+.. + +.+..+.. +...+.+++|
T Consensus 69 ~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 69 QIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp EEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred EecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE
Confidence 998776 4455556778889999999999888887 789999999963 2 33333321 1234889999
Q ss_pred ecCCCEEEEEeCCCeEEEEecC-CCceeee--ccC-CCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC---Cc--c
Q psy9327 172 HPTDDIVVSASLDQTIRVWDIS-GLRKKNV--APG-MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK---ME--P 242 (641)
Q Consensus 172 sp~g~~lvSgs~DgtI~IWD~~-~~~~~~~--~~~-~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~---~~--~ 242 (641)
+|+|+++++...++.|++||+. +++.... ... .+.....+. .+|--. ..+.+...++.+.+|+.. +. .
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~-~spdg~--~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV-FSPDGQ--YAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE-ECTTSS--EEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE-ECCCCC--EEEEEeCCCCEEEEEEecCCCCceEE
Confidence 9999977777778999999998 4433211 111 111111111 111000 012344567889999833 22 1
Q ss_pred eeeecC-------CcceEEEEEcCCccEEEEe-cCCeEEEEEcCC-CCeEe---cccc----ce-EEEEEcCcEEEEEeC
Q psy9327 243 LCNIHE-------NTRVKSGAWDESGVFIYTT-SNHIKYAIVNGD-HGIIR---TLDL----PI-YITKIKGNQVYYLDR 305 (641)
Q Consensus 243 ~~~~~~-------~~~I~sla~~p~g~~L~t~-s~~~k~~l~~~~-~g~I~---~~d~----p~-~~~~~~g~~v~~~~~ 305 (641)
...+.. ...+..++|+|+|.+|+.+ ..++.+.+|+.+ +|... .+.. |. ..+..++..++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 222221 1458889999999988654 467888888754 33332 2211 22 224566777877775
Q ss_pred C-CCeEEEEeCC
Q psy9327 306 E-CSPHVLRIDP 316 (641)
Q Consensus 306 d-g~i~v~~~~~ 316 (641)
+ +.+.+|.++.
T Consensus 306 ~~~~v~v~~~d~ 317 (347)
T 3hfq_A 306 NTDNATLYARDL 317 (347)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCcEEEEEEeC
Confidence 4 8899998875
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.62 E-value=5.3e-14 Score=148.67 Aligned_cols=257 Identities=10% Similarity=0.005 Sum_probs=165.2
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECc-cCccccccccc-ccCeEEEEEeCCCCE--EEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFDEH-EGPVRGICFHNQQPI--FVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~-~~~~l~~~~~h-~~~V~~i~fsp~~~~--l~sgs~~~~~~~~~~~~~~~ 85 (641)
..+..++|+|+|++|++++.+ .|.+||+. +++........ .+.+.+++|+|++++ +++++. +
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~-------~------ 105 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQ-------P------ 105 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSS-------T------
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecC-------C------
Confidence 467899999999999999887 99999997 77654332211 133556899999995 344420 0
Q ss_pred cCCcceeeEEEee----CCCeEEEEECC-CCeeEEEEc----cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECC-CCe
Q psy9327 86 NEPCLFRIKSVLG----DDYKIKVWNYK-QRKCIFTLL----GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQ-SRN 154 (641)
Q Consensus 86 ~~~~~~~~~~~~s----~Dg~I~vWD~~-t~~~~~~~~----~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~-~~~ 154 (641)
. +...+. .++++.+|++. +++....+. .+...+.+++|+|+|+++++++ .++.|++||+. +++
T Consensus 106 -----~-~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 106 -----P-YAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE 179 (365)
T ss_dssp -----T-CCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred -----c-ceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC
Confidence 0 000001 48899999997 466544433 2556799999999999887765 46899999998 675
Q ss_pred eE--EEEc--cCCCCEEEEEEecCCCEEEEEeC-CCeEEEEecC--CCceee---eccCCCceeeecccCCCceeeeeee
Q psy9327 155 CI--CVLT--GHNHYVMCAQFHPTDDIVVSASL-DQTIRVWDIS--GLRKKN---VAPGMGKLVLSMKSKHPIWKYCKPV 224 (641)
Q Consensus 155 ~i--~~l~--~h~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~--~~~~~~---~~~~~~~~v~s~~~~~~v~~~~~~l 224 (641)
.. ..+. .|...++.++|+|+|+++++++. +++|.+|++. +++... .+... ...
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~-------~~~---------- 242 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI-------PPG---------- 242 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-------CTT----------
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-------CCC----------
Confidence 43 3343 24667999999999999887775 7899999875 333211 00000 000
Q ss_pred eeeCCCeeEEEecCCCcceeeecCCcceEEEE-EcCCccEEEEecCC-e-----EEEEEcCC-CCeEec----ccc----
Q psy9327 225 KYCNPKHTLHICNRKMEPLCNIHENTRVKSGA-WDESGVFIYTTSNH-I-----KYAIVNGD-HGIIRT----LDL---- 288 (641)
Q Consensus 225 ~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla-~~p~g~~L~t~s~~-~-----k~~l~~~~-~g~I~~----~d~---- 288 (641)
..+. . .. ......+..++ |+|+|++|++++.. . .+.+|+.+ +|.+.. ...
T Consensus 243 ----~~g~------~-~~---~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~ 308 (365)
T 1jof_A 243 ----IPDR------D-PE---TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG 308 (365)
T ss_dssp ----CCCB------C-TT---TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCC
T ss_pred ----cCCc------c-cc---cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCC
Confidence 0000 0 00 00011467899 99999999877632 2 78888754 565442 211
Q ss_pred ce-EEEEE---cCcEEEEEeCC-CCeEEEEeCCc
Q psy9327 289 PI-YITKI---KGNQVYYLDRE-CSPHVLRIDPT 317 (641)
Q Consensus 289 p~-~~~~~---~g~~v~~~~~d-g~i~v~~~~~~ 317 (641)
|. ..+.. +|..++..+.+ +.+.+|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 11 12345 68889888865 89999999875
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=166.11 Aligned_cols=227 Identities=9% Similarity=0.107 Sum_probs=152.5
Q ss_pred CeEEEEEccCCCeEEEEeC---------CCcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLH---------NGVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~---------dg~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.|.+++|||||++|++++. +++|++||+.+++.+ ..+ ...+..++|||||++|+.+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~---------- 127 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYV---------- 127 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEE----------
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEE----------
Confidence 3889999999999998876 789999999988763 223 3568899999999999998
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCe-----------------EEEEEccCCCEEEEEeC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYI-----------------RTTFFHHEYPWILSASD 141 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V-----------------~~v~fsp~~~~l~sgs~ 141 (641)
.++.|++||..+++..... .++...| .+++|+|||++|++++.
T Consensus 128 -------------------~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 128 -------------------YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp -------------------ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred -------------------ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 4789999999988765432 2333322 48999999999999886
Q ss_pred CC----------------------------------eEEEEECCCCeeE--------EEEccCCCCEEEEEEecCCCEEE
Q psy9327 142 DQ----------------------------------TIRIWYWQSRNCI--------CVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 142 Dg----------------------------------~I~vWd~~~~~~i--------~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
|. +|++||+.+++.. ..+.+|...+.+++|+||+.+++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEE
Confidence 52 7899999987652 12346888999999999988777
Q ss_pred EEeCC----CeEEEEe----cCCCceeeec----cCCCceeeecccCCCceeeeee---eeeeC--CCeeEEEecCCCcc
Q psy9327 180 SASLD----QTIRVWD----ISGLRKKNVA----PGMGKLVLSMKSKHPIWKYCKP---VKYCN--PKHTLHICNRKMEP 242 (641)
Q Consensus 180 Sgs~D----gtI~IWD----~~~~~~~~~~----~~~~~~v~s~~~~~~v~~~~~~---l~s~~--~d~~I~i~d~~~~~ 242 (641)
+.... ..|.+|| ..+++..... .++...+.......+.|..... +.+.. ....|.+||.....
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 74432 2488899 7777766655 2443333200001233322211 11222 34467777844433
Q ss_pred eeeecC-CcceEEEEEcCCccEEEEecCC
Q psy9327 243 LCNIHE-NTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 243 ~~~~~~-~~~I~sla~~p~g~~L~t~s~~ 270 (641)
...+.. ...+..+.+. ++..++..+.+
T Consensus 349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 349 AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 333433 4456666666 66666655543
No 165
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=6.4e-13 Score=135.67 Aligned_cols=232 Identities=9% Similarity=0.046 Sum_probs=158.5
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++|+|++.++++..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~----------- 87 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSH----------- 87 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEET-----------
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEec-----------
Confidence 45566777889999999998 7788888999999998876 566777788899999999999887775
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEEEeC----------------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASD---------------- 141 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs~---------------- 141 (641)
.++.|.+||..+++........ ...+.+++++|+|.++++.+.
T Consensus 88 -----------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 88 -----------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp -----------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred -----------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccC
Confidence 6789999999888765443322 234678999999998887321
Q ss_pred -CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC-CCce---eeeccCCCceee--ecccC
Q psy9327 142 -DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRK---KNVAPGMGKLVL--SMKSK 214 (641)
Q Consensus 142 -Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~-~~~~---~~~~~~~~~~v~--s~~~~ 214 (641)
.+.|..+|.. ++ ...+..+......++|+|+++.+++.+.++.|.+||+. .++. ...+........ .....
T Consensus 151 ~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 151 PGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp SSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred CCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 3456666654 43 44555677788999999999988888888999999996 3332 122211100000 11111
Q ss_pred CCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEE-cCCccEEEEecCCeEEE
Q psy9327 215 HPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAW-DESGVFIYTTSNHIKYA 274 (641)
Q Consensus 215 ~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~-~p~g~~L~t~s~~~k~~ 274 (641)
.. +..+. ++.|.+||..+..+..+.....+.+++| +|++..|+.++.++-+.
T Consensus 229 G~-------l~v~~-~~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 229 GL-------IWASA-GDGVHVLTPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp SC-------EEEEE-TTEEEEECTTSCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEE
T ss_pred CC-------EEEEc-CCeEEEECCCCCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEE
Confidence 11 11222 5667778766666555554333777777 47777777777654333
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=1.2e-13 Score=146.14 Aligned_cols=271 Identities=9% Similarity=0.013 Sum_probs=168.8
Q ss_pred eEEEEEccCCCeEEEEeCC---CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 12 VKGLSFHPKRPWILSSLHN---GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~d---g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+.+++|+|||++|+.+... ..|.+||..+++.......+......+.|+|++++|+.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~------------------ 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK------------------ 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE------------------
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE------------------
Confidence 7788999999998877543 4688889888765433333333333478999999998887
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEE-------------------EEEccCCCEEEEE-----eCCCe
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT-------------------TFFHHEYPWILSA-----SDDQT 144 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~-------------------v~fsp~~~~l~sg-----s~Dg~ 144 (641)
.++.|.+||+.+++.......+.+.... ++|+|+++.++.+ ..+..
T Consensus 100 ----------~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 100 ----------NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp ----------TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred ----------cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 7789999999998876666545443322 3467777766544 45678
Q ss_pred EEEEECCCCeeEEEEccCCCCEEEEEEec-CCCEEEEEeCC------CeEEEEecCCCceeeeccCC-CceeeecccCCC
Q psy9327 145 IRIWYWQSRNCICVLTGHNHYVMCAQFHP-TDDIVVSASLD------QTIRVWDISGLRKKNVAPGM-GKLVLSMKSKHP 216 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~D------gtI~IWD~~~~~~~~~~~~~-~~~v~s~~~~~~ 216 (641)
|++||+.+++..... .+...+..+.|+| ++..|+.++.+ ..|.+||+.+++........ ...+..+. ..|
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~-~sp 247 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF-WIP 247 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE-ECT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE-ECC
Confidence 999999988765444 4677899999999 78877766654 36888888765543333311 11222211 111
Q ss_pred ceeeeeeeeee-----CCCeeEEEecCCCcceeeecCCcceEEEEEcC-CccEEEEec----------------CCeEEE
Q psy9327 217 IWKYCKPVKYC-----NPKHTLHICNRKMEPLCNIHENTRVKSGAWDE-SGVFIYTTS----------------NHIKYA 274 (641)
Q Consensus 217 v~~~~~~l~s~-----~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p-~g~~L~t~s----------------~~~k~~ 274 (641)
--.. ++.+ ...+.|.+||........+....... .+|+| +|.+++.++ .+..++
T Consensus 248 dg~~---l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 248 DGSA---MAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp TSSC---EEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred CCCE---EEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 0000 1222 12255999995433332222211233 89999 999888754 346788
Q ss_pred EEcCCCCeEecccc-c---------------eEEEEEcCcEEEE-EeCCCCeEEEEeCC
Q psy9327 275 IVNGDHGIIRTLDL-P---------------IYITKIKGNQVYY-LDRECSPHVLRIDP 316 (641)
Q Consensus 275 l~~~~~g~I~~~d~-p---------------~~~~~~~g~~v~~-~~~dg~i~v~~~~~ 316 (641)
+|+.+++.++.+.. + ...+..+|..++. .++++...+|.++.
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 89877665433211 1 1234456666554 44667777777663
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.52 E-value=8.4e-13 Score=136.81 Aligned_cols=227 Identities=9% Similarity=-0.028 Sum_probs=152.9
Q ss_pred EEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCC
Q psy9327 56 GICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYP 134 (641)
Q Consensus 56 ~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~ 134 (641)
++++++++.++++++ .+++|.+||..+++.+..+..+. ..+..++|+|+++
T Consensus 4 g~~~~~~~~~~v~~~----------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 55 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN----------------------------YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR 55 (349)
T ss_dssp CCCCCTTCEEEEEEE----------------------------TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS
T ss_pred cccccCCCEEEEEeC----------------------------CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC
Confidence 456777887888876 89999999999999988887554 2577899999998
Q ss_pred EE-EEEeCCCeEEEEECCCCeeEEEEccCC------CCEEEEEEecCCCEEEEEeCC------------CeEEEEecCCC
Q psy9327 135 WI-LSASDDQTIRIWYWQSRNCICVLTGHN------HYVMCAQFHPTDDIVVSASLD------------QTIRVWDISGL 195 (641)
Q Consensus 135 ~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~------~~V~sl~fsp~g~~lvSgs~D------------gtI~IWD~~~~ 195 (641)
.+ ++++.++.|.+||..+++.+..+..+. ..+.+++|+|+|+++++++.+ +.|.+||+.++
T Consensus 56 ~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 56 TAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 55 566678999999999998887776332 237789999999999998865 89999999885
Q ss_pred ceee---eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecC-----------------------
Q psy9327 196 RKKN---VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHE----------------------- 248 (641)
Q Consensus 196 ~~~~---~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~----------------------- 248 (641)
+... ...... .+.++.. +| ...+..+ ++.+.+||. .+.....+..
T Consensus 136 ~~~~~~~~~~~~~-~~~~~~~-s~----dg~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
T 1jmx_B 136 LEAKPVRTFPMPR-QVYLMRA-AD----DGSLYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR 207 (349)
T ss_dssp GGBCCSEEEECCS-SCCCEEE-CT----TSCEEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTT
T ss_pred cccceeeeccCCC-cccceeE-CC----CCcEEEc--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcc
Confidence 4332 222111 1211110 11 0001111 223777773 3332222211
Q ss_pred ----------------------------------------------CcceEEEEEcC-CccEEEEecCCeEEEEEcCCCC
Q psy9327 249 ----------------------------------------------NTRVKSGAWDE-SGVFIYTTSNHIKYAIVNGDHG 281 (641)
Q Consensus 249 ----------------------------------------------~~~I~sla~~p-~g~~L~t~s~~~k~~l~~~~~g 281 (641)
...+.+++|+| +|.+++++ ++.+.+|+..++
T Consensus 208 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 208 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence 11345678889 99999988 778999998877
Q ss_pred eE-ecccc---ce-EEEEEcCcEEEEEeCCCCeEEEEeCCcchh
Q psy9327 282 II-RTLDL---PI-YITKIKGNQVYYLDRECSPHVLRIDPTEFK 320 (641)
Q Consensus 282 ~I-~~~d~---p~-~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~ 320 (641)
.+ ..++. +. ..+..++..++..+.++.+.+|+.++.+..
T Consensus 286 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 286 KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred eEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence 64 33322 21 224456778888888899999998875543
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=1.4e-12 Score=137.81 Aligned_cols=250 Identities=10% Similarity=0.020 Sum_probs=156.3
Q ss_pred ccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEE--eCCCCEEEEeceeeEEeeeceeee
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF--HNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~f--sp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+|...+.+.+|+|||+.|+.++.++.|.+||+.+++....+..+.+.+....| +|++..++.... .+
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~------~~---- 146 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEI------RR---- 146 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEE------EG----
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccc------cC----
Confidence 345555557789999999999999999999999998776656556665554444 899998875320 00
Q ss_pred cccCCcce----eeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCC
Q psy9327 84 SRNEPCLF----RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDD------QTIRIWYWQS 152 (641)
Q Consensus 84 ~~~~~~~~----~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D------g~I~vWd~~~ 152 (641)
....+... ........+..|.+||+.+++.. .+..+...+..++|+| ++..|+.++.+ ..|.++|...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~ 225 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG 225 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence 00000000 00001125578999999998754 4445777899999999 99988877753 3788888766
Q ss_pred CeeEEEEccCC--CCEEEEEEecCCCEEEEEeC-CC----eEEEEecCCCceeee--ccCCCceeeecccCCCceeeeee
Q psy9327 153 RNCICVLTGHN--HYVMCAQFHPTDDIVVSASL-DQ----TIRVWDISGLRKKNV--APGMGKLVLSMKSKHPIWKYCKP 223 (641)
Q Consensus 153 ~~~i~~l~~h~--~~V~sl~fsp~g~~lvSgs~-Dg----tI~IWD~~~~~~~~~--~~~~~~~v~s~~~~~~v~~~~~~ 223 (641)
+.. ..+..+. ..+....|+|+|+.|+..+. ++ .|.+||+.+++.... .++...... ......|.....
T Consensus 226 ~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~--~~~~~~~spdg~ 302 (388)
T 3pe7_A 226 TNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMS--NYDGSLMVGDGS 302 (388)
T ss_dssp CCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEE--CTTSSEEEEEEC
T ss_pred Cce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeee--cCCCCeEccCCC
Confidence 543 3444444 35788999999997755443 22 399999998875332 222101100 011112332221
Q ss_pred -eee---------eCCCeeEEEecCCCcceeeecC-Cc-----------ceEEEEEcCCccEEEEecC
Q psy9327 224 -VKY---------CNPKHTLHICNRKMEPLCNIHE-NT-----------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 224 -l~s---------~~~d~~I~i~d~~~~~~~~~~~-~~-----------~I~sla~~p~g~~L~t~s~ 269 (641)
++. ...+..|.+||........+.. .. .+.+++|+|+|..|+.++.
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp CC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred cceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 111 1456689999955444444433 22 4778899999998887663
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=4.6e-13 Score=141.37 Aligned_cols=204 Identities=10% Similarity=0.045 Sum_probs=139.3
Q ss_pred eEEEEEccCCCe--EEEEe-------------CCCcEEEEECc-cCccccccc----ccccCeEEEEEeCCCCEEEEece
Q psy9327 12 VKGLSFHPKRPW--ILSSL-------------HNGVIQLWDYR-MNTLLEKFD----EHEGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 12 V~~l~fspdg~~--Lasg~-------------~dg~I~iWD~~-~~~~l~~~~----~h~~~V~~i~fsp~~~~l~sgs~ 71 (641)
+.+++|+|+|++ ++++. .+|++.+|++. .++....+. .+...+.+++|+|+|+++++++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~- 163 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD- 163 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc-
Confidence 556899999994 55553 68999999997 465544333 2456899999999999888775
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-CCeeE--EEEc--cCCCCeEEEEEccCCCEEEEEeC-CCeE
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-QRKCI--FTLL--GHLDYIRTTFFHHEYPWILSASD-DQTI 145 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~~~~--~~~~--~h~~~V~~v~fsp~~~~l~sgs~-Dg~I 145 (641)
..++.|.+||+. +++.. ..+. .|...++.++|+|+++++++++. ++.|
T Consensus 164 --------------------------~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 217 (365)
T 1jof_A 164 --------------------------LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp --------------------------TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred --------------------------CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE
Confidence 257899999998 77643 3343 24567999999999998887764 7899
Q ss_pred EEEECC--CCeeE---EEEc-------cCCC------CEEEEE-EecCCCEEEEEeCCC------eEEEEecC-CCceee
Q psy9327 146 RIWYWQ--SRNCI---CVLT-------GHNH------YVMCAQ-FHPTDDIVVSASLDQ------TIRVWDIS-GLRKKN 199 (641)
Q Consensus 146 ~vWd~~--~~~~i---~~l~-------~h~~------~V~sl~-fsp~g~~lvSgs~Dg------tI~IWD~~-~~~~~~ 199 (641)
.+|++. +++.. ..+. +|.. .+..++ |+|+|++|++++.+. +|.+||+. +++...
T Consensus 218 ~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 218 CEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 999875 45432 1221 2232 588999 999999887766432 89999986 333211
Q ss_pred eccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcC---CccEEEEecC-CeEEEE
Q psy9327 200 VAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDE---SGVFIYTTSN-HIKYAI 275 (641)
Q Consensus 200 ~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p---~g~~L~t~s~-~~k~~l 275 (641)
... .+ . ........++|+| +|.+|++++. ++.+.+
T Consensus 298 ~~~----~~---~----------------------------------~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v 336 (365)
T 1jof_A 298 QLF----LS---P----------------------------------TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI 336 (365)
T ss_dssp EEE----EE---E----------------------------------CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred eee----ee---e----------------------------------cCCCCcccceecCCCcCCCEEEEEEcCCCeEEE
Confidence 000 00 0 0112234478888 7999998875 477777
Q ss_pred EcCCCCeE
Q psy9327 276 VNGDHGII 283 (641)
Q Consensus 276 ~~~~~g~I 283 (641)
|..+.+.+
T Consensus 337 ~~~~~~~l 344 (365)
T 1jof_A 337 YRWKDEFL 344 (365)
T ss_dssp EEEETTEE
T ss_pred EEEchhhC
Confidence 76555433
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=4.3e-13 Score=152.86 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=164.0
Q ss_pred eeccCCCCeEEEEEccCCCeEEEE--eCCCcEEEEECccCcccccccccccCeE---------EEEEe--CCCCE-EEEe
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSS--LHNGVIQLWDYRMNTLLEKFDEHEGPVR---------GICFH--NQQPI-FVSG 69 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg--~~dg~I~iWD~~~~~~l~~~~~h~~~V~---------~i~fs--p~~~~-l~sg 69 (641)
.+.+|...+..++|++++-+++++ +.++...||....+.....+..|...+. ...|+ ||+.. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 356799999999999887777777 5588999999655545556666666666 66676 99998 7766
Q ss_pred ceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC--C-CeeEEEEcc-----CCCCeEEEEEccCCCEEEEEeC
Q psy9327 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK--Q-RKCIFTLLG-----HLDYIRTTFFHHEYPWILSASD 141 (641)
Q Consensus 70 s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t-~~~~~~~~~-----h~~~V~~v~fsp~~~~l~sgs~ 141 (641)
+ ..+..|.+|+.. . +. ...+.. |...+.+++|+|||+.|++++.
T Consensus 98 ~---------------------------~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~ 149 (662)
T 3azo_A 98 H---------------------------FGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAE 149 (662)
T ss_dssp B---------------------------TTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEE
T ss_pred E---------------------------CCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEe
Confidence 5 146677777776 3 43 455555 6678899999999999999887
Q ss_pred C----------CeEEEEECCC------CeeEEEEc-cCCCCEEEEEEecCCCEEEEEeCCC--------eEEEEecC-CC
Q psy9327 142 D----------QTIRIWYWQS------RNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQ--------TIRVWDIS-GL 195 (641)
Q Consensus 142 D----------g~I~vWd~~~------~~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~Dg--------tI~IWD~~-~~ 195 (641)
| ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.++ .|++||+. ++
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred cccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 7 6899999988 554 4555 6667888999999999999887553 78888887 44
Q ss_pred ---ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCe-
Q psy9327 196 ---RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI- 271 (641)
Q Consensus 196 ---~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~- 271 (641)
+...... .+...+.+++|+|||.++++++.++
T Consensus 229 ~~~~~~~l~~--------------------------------------------~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 229 RFADTRTLLG--------------------------------------------GPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp CEEEEEEEEE--------------------------------------------ETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cccccEEeCC--------------------------------------------CCCceEcceEECCCCeEEEEECCCCC
Confidence 1111111 1134556678888888666666555
Q ss_pred -EEEEEcCCCCeEecc-cc-------------ceEEEEEcCcEEEEEeCCCCeEEEEeC
Q psy9327 272 -KYAIVNGDHGIIRTL-DL-------------PIYITKIKGNQVYYLDRECSPHVLRID 315 (641)
Q Consensus 272 -k~~l~~~~~g~I~~~-d~-------------p~~~~~~~g~~v~~~~~dg~i~v~~~~ 315 (641)
++++++.+++..+.+ .. ....+..++..+++.+. +..++|.++
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 667776555544322 11 01112235666677777 778888665
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=1.8e-12 Score=147.78 Aligned_cols=246 Identities=7% Similarity=0.011 Sum_probs=159.9
Q ss_pred eeccCCCCeE---------EEEEc--cCCCe-EEEEeC-CCcEEEEECc--c-Ccccccccc-----cccCeEEEEEeCC
Q psy9327 4 KFETKSARVK---------GLSFH--PKRPW-ILSSLH-NGVIQLWDYR--M-NTLLEKFDE-----HEGPVRGICFHNQ 62 (641)
Q Consensus 4 ~~~~H~~~V~---------~l~fs--pdg~~-Lasg~~-dg~I~iWD~~--~-~~~l~~~~~-----h~~~V~~i~fsp~ 62 (641)
.+..|...+. +..|+ |||++ |+.++. +..|.+|+.. . + ....+.. |...+.+++|+||
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~-~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA-VPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC-CCEECSCCCCSTTCEEEEEEEEETT
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC-CCEeccCCccCCCCccccCcEECCC
Confidence 4555655555 56565 99998 776654 5566666654 2 3 3444444 6778999999999
Q ss_pred CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC----------CeEEEEECCC------CeeEEEEc-cCCCCeE
Q psy9327 63 QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD----------YKIKVWNYKQ------RKCIFTLL-GHLDYIR 125 (641)
Q Consensus 63 ~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D----------g~I~vWD~~t------~~~~~~~~-~h~~~V~ 125 (641)
|+.|++++ .+ ..|.+||+.+ ++. ..+. .+.+.+.
T Consensus 141 g~~l~~~~----------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~ 191 (662)
T 3azo_A 141 RGEVWCMA----------------------------EEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVT 191 (662)
T ss_dssp TTEEEEEE----------------------------EEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEEC
T ss_pred CCEEEEEE----------------------------ecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCccc
Confidence 99999886 33 5899999988 554 4555 6667888
Q ss_pred EEEEccCCCEEEEEeCC--------CeEEEEECC-CC---eeEEEEccCCCCEEEEEEecCCCEEEEEeCCC--eEEEEe
Q psy9327 126 TTFFHHEYPWILSASDD--------QTIRIWYWQ-SR---NCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ--TIRVWD 191 (641)
Q Consensus 126 ~v~fsp~~~~l~sgs~D--------g~I~vWd~~-~~---~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg--tI~IWD 191 (641)
.++|+|||++|+.++.+ ..|++||+. ++ +......+|...+..+.|+|||+++++++.|+ .|.+||
T Consensus 192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 89999999999987755 479999998 56 44444555678999999999999888888888 566666
Q ss_pred cCCCceeeeccCCCceeeecccCCCcee-----eee-----eeeeeCCCeeEEEe--cCCCcceeeecC-CcceEEE-EE
Q psy9327 192 ISGLRKKNVAPGMGKLVLSMKSKHPIWK-----YCK-----PVKYCNPKHTLHIC--NRKMEPLCNIHE-NTRVKSG-AW 257 (641)
Q Consensus 192 ~~~~~~~~~~~~~~~~v~s~~~~~~v~~-----~~~-----~l~s~~~d~~I~i~--d~~~~~~~~~~~-~~~I~sl-a~ 257 (641)
..+++......++.. + ..|.|. +.+ -+.++.. +.+++| |.....+..+.. ...+.++ ++
T Consensus 272 ~~~~~~~~l~~~~~~-~-----~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~ 344 (662)
T 3azo_A 272 PATGAATQLCRREEE-F-----AGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTV 344 (662)
T ss_dssp TTTCCEEESSCCSSB-S-----SCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEE
T ss_pred CCCCceeeccccccc-c-----cCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEec
Confidence 656665544433211 1 111111 111 1333444 677777 544333444433 4456666 66
Q ss_pred cCCccEEEEecCC--eEEEEEcCCCCeEecc
Q psy9327 258 DESGVFIYTTSNH--IKYAIVNGDHGIIRTL 286 (641)
Q Consensus 258 ~p~g~~L~t~s~~--~k~~l~~~~~g~I~~~ 286 (641)
++++..+++++.+ ..++.++.+++..+.+
T Consensus 345 ~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 345 SGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 6655555555544 3566666666655433
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.50 E-value=1.1e-11 Score=128.47 Aligned_cols=230 Identities=12% Similarity=0.073 Sum_probs=151.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
.+..+...+.+++|+|+|++++++..++.|.+||..+++.......+...+.+++|+|++.+++++.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~------------- 105 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYL------------- 105 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEEC-------------
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeC-------------
Confidence 4556677789999999999888888899999999988765443335667899999999999877765
Q ss_pred cccCCcceeeEEEeeCC----CeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeC------CCeEEEEECC
Q psy9327 84 SRNEPCLFRIKSVLGDD----YKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQ 151 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~D----g~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~ 151 (641)
.+ +.|.+||..+++....+. .+...+.+++++|++.++++... .+.|..||..
T Consensus 106 ---------------~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 106 ---------------GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp ---------------TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred ---------------CCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 44 689999998887654443 24457899999999998877664 3567777766
Q ss_pred CCeeEEEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCC-Cceeeec--------cCCCceeee--cccCCCcee
Q psy9327 152 SRNCICVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG-LRKKNVA--------PGMGKLVLS--MKSKHPIWK 219 (641)
Q Consensus 152 ~~~~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~-~~~~~~~--------~~~~~~v~s--~~~~~~v~~ 219 (641)
+++... +..+...+..++|+|++..+ ++.+.++.|.+||..+ +.....+ .++ ..... ......+|
T Consensus 171 ~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~- 247 (333)
T 2dg1_A 171 FRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLY- 247 (333)
T ss_dssp SCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEE-
T ss_pred CCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEE-
Confidence 554432 33334568899999999855 4556688999999963 2222111 110 01111 11111111
Q ss_pred eeeeeeeeCCCeeEEEecCCCcceeeecCCc-------ceEEEEEcCCccEEEEecC
Q psy9327 220 YCKPVKYCNPKHTLHICNRKMEPLCNIHENT-------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 220 ~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~-------~I~sla~~p~g~~L~t~s~ 269 (641)
.+...++.|.+||.+...+..+.... .+.+++|+|++..|+.++.
T Consensus 248 -----v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 248 -----VAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp -----EEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred -----EEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 12224567777776555544443321 4677888877766665543
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.49 E-value=5e-12 Score=146.43 Aligned_cols=238 Identities=11% Similarity=0.032 Sum_probs=153.4
Q ss_pred EEEEEccCCCeEEEEeCC---------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 13 KGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
..++|||||++|+.++.+ +.+.+||+.+++.. .+..|.+.+...+|||||+.|+.+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-------------- 129 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-------------- 129 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE--------------
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE--------------
Confidence 448899999999998876 56779999998754 566788899999999999999988
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCe-----------------EEEEEccCCCEEEEEeCCC--
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYI-----------------RTTFFHHEYPWILSASDDQ-- 143 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V-----------------~~v~fsp~~~~l~sgs~Dg-- 143 (641)
.|+.|.+||..+++.... ..++.+.+ .+++|||||+.|+.++.|.
T Consensus 130 ---------------~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~ 194 (740)
T 4a5s_A 130 ---------------WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE 194 (740)
T ss_dssp ---------------ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT
T ss_pred ---------------ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccC
Confidence 478999999998875442 23333333 3589999999999876332
Q ss_pred ----------------------------------eEEEEECCC---Ce--eEEEEc------cCCCCEEEEEEecCCCEE
Q psy9327 144 ----------------------------------TIRIWYWQS---RN--CICVLT------GHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 144 ----------------------------------~I~vWd~~~---~~--~i~~l~------~h~~~V~sl~fsp~g~~l 178 (641)
+|++||+.+ ++ ....+. +|...+..++|+|||+++
T Consensus 195 v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~ 274 (740)
T 4a5s_A 195 VPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERIS 274 (740)
T ss_dssp CCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEE
T ss_pred CceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEE
Confidence 588899988 73 233443 388899999999999966
Q ss_pred EEEeC----CCeEEEEecCCCc----eeeec----cCCCceeeecccCCCceeeeee-ee-ee---CCCeeEEEecCCCc
Q psy9327 179 VSASL----DQTIRVWDISGLR----KKNVA----PGMGKLVLSMKSKHPIWKYCKP-VK-YC---NPKHTLHICNRKME 241 (641)
Q Consensus 179 vSgs~----DgtI~IWD~~~~~----~~~~~----~~~~~~v~s~~~~~~v~~~~~~-l~-s~---~~d~~I~i~d~~~~ 241 (641)
+.... +..|++||..+++ +.... .++..++.......|.|..... ++ .. .....|.+||..+.
T Consensus 275 ~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 275 LQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 65432 3479999999887 32222 2233333200012344432221 11 22 23457888885554
Q ss_pred ceeeecC-CcceEEEE-EcCCccEEEEecCC-------eEEEEEcCCCCe
Q psy9327 242 PLCNIHE-NTRVKSGA-WDESGVFIYTTSNH-------IKYAIVNGDHGI 282 (641)
Q Consensus 242 ~~~~~~~-~~~I~sla-~~p~g~~L~t~s~~-------~k~~l~~~~~g~ 282 (641)
....+.. ...+..+. ++ +..++..++. ..++..+.+.+.
T Consensus 355 ~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 355 DCTFITKGTWEVIGIEALT--SDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp SCEESCCSSSCEEEEEEEC--SSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred ceEecccCCEEEEEEEEEe--CCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 4444443 33454443 55 4444443332 345555544443
No 174
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.48 E-value=2.1e-12 Score=135.54 Aligned_cols=160 Identities=8% Similarity=0.044 Sum_probs=117.3
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcc------c-------ccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTL------L-------EKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~------l-------~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
..+.+++|+|+|+++++++ .++.|.+|++..... + .....+...+.+++|+|+++++++++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~----- 229 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN----- 229 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-----
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-----
Confidence 3468899999999776655 589999999875431 1 11123445678999999999887775
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc---cCCCCeEEEEEccCCCEEEEEeC--CCeEEEE
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL---GHLDYIRTTFFHHEYPWILSASD--DQTIRIW 148 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~---~h~~~V~~v~fsp~~~~l~sgs~--Dg~I~vW 148 (641)
..++.|.+||+.+++. +..+. .+.....+++|+|+++++++++. ++.|.+|
T Consensus 230 ----------------------~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 230 ----------------------EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp ----------------------TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred ----------------------CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 2689999999998764 33332 34456789999999998866655 5899999
Q ss_pred ECC--CCe--eEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecC--CCce
Q psy9327 149 YWQ--SRN--CICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDIS--GLRK 197 (641)
Q Consensus 149 d~~--~~~--~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~--~~~~ 197 (641)
++. +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+|++. +++.
T Consensus 288 ~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 985 344 4445544 55788999999999888887 67899997554 5544
No 175
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=4.2e-10 Score=113.74 Aligned_cols=270 Identities=10% Similarity=0.050 Sum_probs=177.7
Q ss_pred eccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+..+...+.+++++++|.+.++...++.|..||.. ++. ..+. .+...+.++++++++.+.++..
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~------------ 75 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTEN------------ 75 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEET------------
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCC------------
Confidence 44566789999999999977776668899999987 543 3322 3456799999999999888775
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee-EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEc
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLT 160 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~ 160 (641)
.++.|..||.. ++. ...+......+.++++++++.++++...++.|..||. +++... ...
T Consensus 76 ----------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 76 ----------------AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp ----------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred ----------------CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 68899999986 432 2222234567899999999998888888899999998 554332 233
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
.+...+.++++.++|.+.++...++.|..||. +++.... .+.....+.++. ....+| .+....+.|..+|
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~------v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALW------FVEIIGNKIGRIT 210 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE------EEETTTTEEEEEC
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEE------EEccCCceEEEEC
Confidence 45567899999999988888777899999999 5554332 222122222211 111122 1223466788888
Q ss_pred CCCcceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------ceEEEEEcCcEEEEEeCCCC
Q psy9327 238 RKMEPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------PIYITKIKGNQVYYLDRECS 308 (641)
Q Consensus 238 ~~~~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------p~~~~~~~g~~v~~~~~dg~ 308 (641)
.... +..+. ....+.+++++++|...++...++.+..++. ++.+..+.. |..+.. .+..++..+..+.
T Consensus 211 ~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~ 287 (299)
T 2z2n_A 211 TSGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDK 287 (299)
T ss_dssp TTCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTE
T ss_pred CCCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCc
Confidence 6433 22232 2467889999999985555556677888876 566655432 222222 4445555554555
Q ss_pred eEEEEeCC
Q psy9327 309 PHVLRIDP 316 (641)
Q Consensus 309 i~v~~~~~ 316 (641)
+..++.++
T Consensus 288 l~~~~~~~ 295 (299)
T 2z2n_A 288 IGKLTLIK 295 (299)
T ss_dssp EEEEEEC-
T ss_pred EEEEEcCc
Confidence 55555544
No 176
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.47 E-value=5e-13 Score=150.12 Aligned_cols=153 Identities=9% Similarity=-0.042 Sum_probs=123.4
Q ss_pred eEEEEEccCCCe-EEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 12 VKGLSFHPKRPW-ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 12 V~~l~fspdg~~-Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
+...+|+|+|+. +++++.++.+.+||+.+++..... .+.. .+++|+|||+++++++
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~--~~~~~spDG~~la~~~-------------------- 168 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG--FGFVSDIRGDLIAGLG-------------------- 168 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--CEEEEEEETTEEEEEE--------------------
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--ceEEECCCCCEEEEEE--------------------
Confidence 446688888863 333444455669999888654433 3333 7899999999999876
Q ss_pred eeeEEEeeCC----CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCeeEEEEccCCC
Q psy9327 91 FRIKSVLGDD----YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ--TIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 91 ~~~~~~~s~D----g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg--~I~vWd~~~~~~i~~l~~h~~ 164 (641)
.+ +.|++||+.+++.. .+..|.+.+..++|+|||++|++++.|+ .|++||+.+++.. .+.+|..
T Consensus 169 --------~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~ 238 (582)
T 3o4h_A 169 --------FFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK 238 (582)
T ss_dssp --------EEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS
T ss_pred --------EcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc
Confidence 34 78999999988764 6788999999999999999999888888 8999999998887 7788888
Q ss_pred CEEEEE--------EecCCCEEEEEeCCCeEEEEecCCCceee
Q psy9327 165 YVMCAQ--------FHPTDDIVVSASLDQTIRVWDISGLRKKN 199 (641)
Q Consensus 165 ~V~sl~--------fsp~g~~lvSgs~DgtI~IWD~~~~~~~~ 199 (641)
.+..+. |+|||.++++++.|+++++|++ ++...
T Consensus 239 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 239 DFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp HHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred ChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 777777 9999999999999999999999 55443
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=2.5e-11 Score=126.22 Aligned_cols=255 Identities=13% Similarity=0.053 Sum_probs=163.2
Q ss_pred CCeEEEEEccCCCeEEEEe---------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSL---------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~---------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+...++ ||++++... .++.|.+||..+++.. .+ ..+..++|+|||.+|+.++.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~--------- 78 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRA--------- 78 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEE---------
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEe---------
Confidence 45778888 898887642 2577999999887642 33 57889999999999988761
Q ss_pred eeecccCCcceeeEEEeeCC--C--eEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC--------------
Q psy9327 81 ILESRNEPCLFRIKSVLGDD--Y--KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD-------------- 142 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~D--g--~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D-------------- 142 (641)
.+ + .|.+||+.+++.......+ . +..++|+|+++.|+.++.+
T Consensus 79 ------------------~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 79 ------------------NEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp ------------------ETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred ------------------ccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 21 3 4888899888766555433 3 9999999999988887642
Q ss_pred -------------CeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCC-------eEEEEecCCCceeeecc
Q psy9327 143 -------------QTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-------TIRVWDISGLRKKNVAP 202 (641)
Q Consensus 143 -------------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-------tI~IWD~~~~~~~~~~~ 202 (641)
..|++||+.+++.+..+.. . .+..+.|+|+| ++++++.++ ...+|.+.+++......
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~ 215 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFE 215 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEE
T ss_pred eeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEecc
Confidence 5799999999887555554 3 78899999999 888886652 44555544444332222
Q ss_pred CCCceeeecccCCCceeeeeeeeeeC--------CCeeEEEecCCCcceeeecC-CcceEE-EEEcCCccEEEEecCCeE
Q psy9327 203 GMGKLVLSMKSKHPIWKYCKPVKYCN--------PKHTLHICNRKMEPLCNIHE-NTRVKS-GAWDESGVFIYTTSNHIK 272 (641)
Q Consensus 203 ~~~~~v~s~~~~~~v~~~~~~l~s~~--------~d~~I~i~d~~~~~~~~~~~-~~~I~s-la~~p~g~~L~t~s~~~k 272 (641)
+ ..+.+....... ++.++ ....|.+|| .+........ ...+.. ++|+ +| .+++++.++.
T Consensus 216 ~--~~~~~~spdg~~------l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 216 K--VSFYAVDSDGER------ILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp E--ESEEEEEECSSC------EEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred C--cceeeECCCCCE------EEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 1 112211100000 22221 235788888 4433322222 456775 8999 88 8888887777
Q ss_pred EEEEcCCCCeEecc---ccceEEEEEcCcEEEEEeCCCCe-EEEEeC
Q psy9327 273 YAIVNGDHGIIRTL---DLPIYITKIKGNQVYYLDRECSP-HVLRID 315 (641)
Q Consensus 273 ~~l~~~~~g~I~~~---d~p~~~~~~~g~~v~~~~~dg~i-~v~~~~ 315 (641)
..+| .++|....+ +..+.........+++.+.++.. .+|.++
T Consensus 285 ~~l~-~~~g~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IWDGEIKPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EESSSEEEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred EEEE-EcCCceEEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 7777 555543322 22222222223566677766665 888887
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=2.8e-11 Score=122.48 Aligned_cols=197 Identities=11% Similarity=0.238 Sum_probs=145.2
Q ss_pred cCCCCeEEEEE-ccCCCeEEEEeC-CCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 7 TKSARVKGLSF-HPKRPWILSSLH-NGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 7 ~H~~~V~~l~f-spdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
+|...+.++++ .+++.++++... ++.|.+|| .+++.+..+.. +...+.+++++|++.++++..
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------------- 139 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVEC------------- 139 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEET-------------
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEEC-------------
Confidence 34567899999 477776666643 88999999 56766666642 446789999999999877776
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.++.|.+||.. ++.+..+. .+...+.++++++++.++++.+.++.|++||. +++.+..+..
T Consensus 140 ---------------~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 202 (286)
T 1q7f_A 140 ---------------KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGG 202 (286)
T ss_dssp ---------------TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESC
T ss_pred ---------------CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEcc
Confidence 78999999964 66666664 45567899999999998888888999999997 4556666653
Q ss_pred C--CCCEEEEEEecCCCEEEEEeCCC-eEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecC
Q psy9327 162 H--NHYVMCAQFHPTDDIVVSASLDQ-TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 162 h--~~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~ 238 (641)
+ ...+..++++|+|.++++.+.++ .|.+||... +....+..+
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~---------------------------------- 247 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESK---------------------------------- 247 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEES----------------------------------
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEccc----------------------------------
Confidence 3 46789999999999999888886 999999543 222222100
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
.....+.+++++|+|..+++ +.++++.+|..
T Consensus 248 --------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 --------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp --------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred --------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 01224567999999976665 55777777764
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.44 E-value=1.8e-11 Score=126.78 Aligned_cols=242 Identities=9% Similarity=-0.013 Sum_probs=166.2
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
+..|.+++|+|++..++..+.++.++.| .++....+..+...+.+++|+|++.+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~------------------ 63 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDV------------------ 63 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEET------------------
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEEC------------------
Confidence 4568899999998888777888999999 3555566666777889999999999877776
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC----CeEEEEECCCCeeEEEEc--cC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD----QTIRIWYWQSRNCICVLT--GH 162 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D----g~I~vWd~~~~~~i~~l~--~h 162 (641)
.++.|.+||..+++.......+...+.+++|+|++.+++++..+ +.|.+||..++.....+. .+
T Consensus 64 ----------~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 64 ----------FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp ----------TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred ----------CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 78999999999888665554567889999999999988887776 789999998876553443 34
Q ss_pred CCCEEEEEEecCCCEEEEEeC------CCeEEEEecCCCceeeeccCCCceeeec--ccCCCceeeeeeeeeeCCCeeEE
Q psy9327 163 NHYVMCAQFHPTDDIVVSASL------DQTIRVWDISGLRKKNVAPGMGKLVLSM--KSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~------DgtI~IWD~~~~~~~~~~~~~~~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
...+.+++++|+|.++++.+. .+.|..||..+++......... ....+ ...... -..+...++.|.
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~i~~~~dg~~-----l~v~~~~~~~i~ 207 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS-VANGIALSTDEKV-----LWVTETTANRLH 207 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES-SEEEEEECTTSSE-----EEEEEGGGTEEE
T ss_pred CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC-cccceEECCCCCE-----EEEEeCCCCeEE
Confidence 567999999999998887664 3556666665544332221110 11111 111100 012223467888
Q ss_pred EecC--CCcceeee--------cCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccc
Q psy9327 235 ICNR--KMEPLCNI--------HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLD 287 (641)
Q Consensus 235 i~d~--~~~~~~~~--------~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d 287 (641)
+||. .+..+..+ .....+..++++++|...+++..++.+.+|+.+...+..+.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE
Confidence 8884 33322211 11236778999999987777667788888987655555543
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=1.6e-11 Score=141.44 Aligned_cols=257 Identities=7% Similarity=-0.041 Sum_probs=159.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCC-----cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNG-----VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg-----~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|...+.+++|||||++||.++.++ +|++||+.+++.+.... ....+.+++|+||++.|+.++.... .+.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~---~~~-- 196 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQ---DGK-- 196 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCC---SSC--
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCcccceEEEEeCCCEEEEEEECCc---ccc--
Confidence 444688999999999998776543 89999999987655322 2233678999999999988761000 000
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCe----eEEEEccCCCCeEEEEEccCCCEEEEEeC-----CCeEEEEECCC-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASD-----DQTIRIWYWQS- 152 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-----Dg~I~vWd~~~- 152 (641)
.... .........|++|++.+++ .+.....|...+..+.|+|+|++|+.++. +..|++||+.+
T Consensus 197 ---~~~~----~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 197 ---SDGT----ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp ---CSSS----CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred ---cccc----ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccc
Confidence 0000 0000013349999998875 22233335667889999999999887765 67899999976
Q ss_pred -----Ce-eEEEEccCCCCEEEEEEecCCCEEEEEeCC----CeEEEEecCCCce---eeeccCCC-ceeeecccCCCce
Q psy9327 153 -----RN-CICVLTGHNHYVMCAQFHPTDDIVVSASLD----QTIRVWDISGLRK---KNVAPGMG-KLVLSMKSKHPIW 218 (641)
Q Consensus 153 -----~~-~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D----gtI~IWD~~~~~~---~~~~~~~~-~~v~s~~~~~~v~ 218 (641)
+. ....+..+.+.+.. .|+|+|..|+..+.+ +.|.+||+.++.. ....+... ..+.++.....-
T Consensus 270 ~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 347 (710)
T 2xdw_A 270 SNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN- 347 (710)
T ss_dssp SSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-
T ss_pred ccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-
Confidence 43 45667677776665 488999877766553 3699999987642 22223222 133322211000
Q ss_pred eeeeeeeeeCCCe--eEEEecC-CCcceeeecC-CcceEEEEEcCCccEEEEe-c---CCeEEEEEcCCCCe
Q psy9327 219 KYCKPVKYCNPKH--TLHICNR-KMEPLCNIHE-NTRVKSGAWDESGVFIYTT-S---NHIKYAIVNGDHGI 282 (641)
Q Consensus 219 ~~~~~l~s~~~d~--~I~i~d~-~~~~~~~~~~-~~~I~sla~~p~g~~L~t~-s---~~~k~~l~~~~~g~ 282 (641)
.-+.+...++ .|.+|+. .+..+..+.. ...+.+++++|++..++.+ + ..+.++.++..++.
T Consensus 348 ---~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 348 ---FLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---EEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---EEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 0123333344 4666774 4544444432 5567888999988655532 2 45788888876655
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.42 E-value=5e-12 Score=145.38 Aligned_cols=243 Identities=8% Similarity=-0.079 Sum_probs=157.9
Q ss_pred cCCCCeEEEEEccCCCeEEE-----EeCCCcEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 7 TKSARVKGLSFHPKRPWILS-----SLHNGVIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Las-----g~~dg~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
+|...+.+++|||||++||. |+.+.+|++||+.+++.+.. .+-..+ .+++|+||++.|+.++
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~--------- 186 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEW--------- 186 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEE---------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEE---------
Confidence 45667999999999999983 34456899999999886511 122222 6799999999999886
Q ss_pred eeeecccCCcceeeEEEeeCCC-------------eEEEEECCCCe----eEEEEccCCCCeEEEEEccCCCEEEEEeCC
Q psy9327 80 CILESRNEPCLFRIKSVLGDDY-------------KIKVWNYKQRK----CIFTLLGHLDYIRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg-------------~I~vWD~~t~~----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D 142 (641)
.|. .|++|++.++. .+.....|...+.++.|+|+|++++.++.+
T Consensus 187 -------------------~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 187 -------------------LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp -------------------CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred -------------------ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 443 49999998875 344444566788999999999988887766
Q ss_pred C----eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe---CCCeEEEEecCCCce---eeeccCC-Cceeeec
Q psy9327 143 Q----TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS---LDQTIRVWDISGLRK---KNVAPGM-GKLVLSM 211 (641)
Q Consensus 143 g----~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs---~DgtI~IWD~~~~~~---~~~~~~~-~~~v~s~ 211 (641)
+ .|++||..++. ...+..+...+....| |+|.+++++. .++.|.+||+.++.. ...++.. ...+.++
T Consensus 248 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 5 67777765554 3445556666667767 5555555544 258999999987653 3333322 2223222
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEec--CCCcceeeec--CCcceEEEEEcCCccEEEE----ecCCeEEEEEcCCCCeE
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICN--RKMEPLCNIH--ENTRVKSGAWDESGVFIYT----TSNHIKYAIVNGDHGII 283 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d--~~~~~~~~~~--~~~~I~sla~~p~g~~L~t----~s~~~k~~l~~~~~g~I 283 (641)
..... ..+.+...++..++|. ..+.....+. +...+..++++|++..++. ....+.+++|+..++..
T Consensus 326 ~~~~~-----~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 326 SIVGG-----HLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEETT-----EEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEECC-----EEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 21111 1134444566655554 3344333332 3556778889998876662 23457888998877765
Q ss_pred ecc
Q psy9327 284 RTL 286 (641)
Q Consensus 284 ~~~ 286 (641)
+.+
T Consensus 401 ~~l 403 (695)
T 2bkl_A 401 ELW 403 (695)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=8.3e-12 Score=131.87 Aligned_cols=243 Identities=9% Similarity=0.011 Sum_probs=162.9
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc------ccCeEEEEEeCCCCEEE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH------EGPVRGICFHNQQPIFV 67 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h------~~~V~~i~fsp~~~~l~ 67 (641)
++..+..+ .++|||||++++++. .+++|.+||..+++.+.++... ......++|+|++++++
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 44444444 899999999999886 3678999999988887776532 34567899999999999
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCC-CEEEEEeCCCeE
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEY-PWILSASDDQTI 145 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I 145 (641)
++.. +.+++|.+||..+++.+.+ +. +. ....+.+.|++ ..+++.+.||++
T Consensus 124 v~n~--------------------------~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~ 175 (361)
T 2oiz_A 124 LQNA--------------------------SPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGL 175 (361)
T ss_dssp EEEE--------------------------SSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSE
T ss_pred EECC--------------------------CCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcE
Confidence 8861 1268999999999998887 54 32 22346677765 678899999999
Q ss_pred EEEECCC-CeeEEE------EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee--eeccC------------C
Q psy9327 146 RIWYWQS-RNCICV------LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK--NVAPG------------M 204 (641)
Q Consensus 146 ~vWd~~~-~~~i~~------l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~--~~~~~------------~ 204 (641)
.+|+... ++.... +..+..++ .+.++|++..++..+.++.+.+||+...... ..+.- .
T Consensus 176 ~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 176 LTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 9999865 544422 22222332 3345778888888889999999999754321 11100 0
Q ss_pred CceeeecccC-CCceeeeeeeeeeC------CCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 205 GKLVLSMKSK-HPIWKYCKPVKYCN------PKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 205 ~~~v~s~~~~-~~v~~~~~~l~s~~------~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
+...+.+... ..++-... . .+. ..+.|.+|| .+.+.+..+..+. ..+++|+|+|++|++++. +.+.+|
T Consensus 255 g~~~~a~~~dg~~lyv~~~-~-~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~ 330 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMH-P-DGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVY 330 (361)
T ss_dssp CSSCEEEETTTTEEEEEEE-S-SCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEE
T ss_pred CeeEEEEecCCCeEEEEEc-c-CCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEE
Confidence 1001111111 11110000 0 000 135899999 5667777777666 999999999999998886 889999
Q ss_pred cCCCC
Q psy9327 277 NGDHG 281 (641)
Q Consensus 277 ~~~~g 281 (641)
+..++
T Consensus 331 D~~t~ 335 (361)
T 2oiz_A 331 DISQP 335 (361)
T ss_dssp ECSSS
T ss_pred ECCCC
Confidence 88777
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=1.6e-11 Score=127.69 Aligned_cols=240 Identities=9% Similarity=0.037 Sum_probs=139.2
Q ss_pred CCeEEEEEccCCCeEEEEeCC---Cc--EEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee-e
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---GV--IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL-E 83 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---g~--I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~-~ 83 (641)
..+.+++|||||++|+.++.+ +. |.+||+.+++...... +.. +.+++|+|+++.|+.++......-...+. .
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 357789999999999887754 33 7777887776544333 334 99999999999988876210000000000 0
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC-------eEEEEECCCCeeE
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ-------TIRIWYWQSRNCI 156 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg-------~I~vWd~~~~~~i 156 (641)
.........+ .......|.+||+.+++.+..+.. . .+..++|+|++ ++++++.+. ...+|.+.+++.
T Consensus 137 ~~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~- 210 (347)
T 2gop_A 137 VPAWFDDLGF--FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE- 210 (347)
T ss_dssp CCCC-----------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-
T ss_pred cceeecCccc--ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-
Confidence 0000000000 001235799999999987455554 3 78899999999 777776542 334444435553
Q ss_pred EEEccCCCCEEEEEEecCCCEEEEEeCC--------CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeC
Q psy9327 157 CVLTGHNHYVMCAQFHPTDDIVVSASLD--------QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 157 ~~l~~h~~~V~sl~fsp~g~~lvSgs~D--------gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~ 228 (641)
..+..+ ..+.++ +|+|+.|+.++.+ ..|.+|| +++......++...+.+. +.|. ..-+.++.
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~----~~~s-dg~~~~~~ 280 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQA----KIKD-GKVYFTLF 280 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEE----EEET-TEEEEEEE
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCc----cEEc-CcEEEEEe
Confidence 344444 555554 9999988877754 3688888 555444444444444320 1222 11234455
Q ss_pred CCeeEEEecCC-CcceeeecCCcceEEEEEcCCccEEEEecCC
Q psy9327 229 PKHTLHICNRK-MEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270 (641)
Q Consensus 229 ~d~~I~i~d~~-~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~ 270 (641)
.++.+++| .. +...........|.+++|+| ..+++++.+
T Consensus 281 ~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 281 EEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp ETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECS
T ss_pred cCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCC
Confidence 66677776 43 33333344466788999999 455555543
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=5.8e-11 Score=118.74 Aligned_cols=233 Identities=5% Similarity=-0.081 Sum_probs=152.9
Q ss_pred CeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
...+++++|+|++++ +.+.++.|..||..++........+...+.++++++++.++++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~-------------------- 84 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTD-------------------- 84 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEE--------------------
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEc--------------------
Confidence 678999999999766 44678999999976554322222334567899999999855554
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
.++.|.+||...+... .+. .....+.++++++++.++++...++.|.+|+..+.........+...+.+
T Consensus 85 ---------~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~ 154 (270)
T 1rwi_B 85 ---------FNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG 154 (270)
T ss_dssp ---------TTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCC
T ss_pred ---------CCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCcee
Confidence 4789999998765433 332 33467899999999998888888899999987665543333334456789
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCCcceeee
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI 246 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~ 246 (641)
++++|+|.++++...++.|.+||..+................+. ....+ ..+...++.|..|+.........
T Consensus 155 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l------~v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 155 VAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTV------YVTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCE------EEEETTTSCEEEECTTCSCCEEC
T ss_pred EEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCE------EEEECCCCcEEEEcCCCCcceee
Confidence 99999999888877789999999987654432221111122211 11111 22333567888888554433333
Q ss_pred cC--CcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 247 HE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 247 ~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
.. ...+.+++++++|...++...++++.++..+
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 22 2567889999998866666666666666543
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.40 E-value=5.9e-11 Score=125.29 Aligned_cols=272 Identities=9% Similarity=0.025 Sum_probs=173.4
Q ss_pred CCCeEEEEe------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 20 KRPWILSSL------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 20 dg~~Lasg~------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
++.++++.. .|+.|.+||..+++.+..+..+..+ .++|+|++++++++..... .
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~------------------~ 73 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHE------------------R 73 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEET------------------T
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEeccc------------------c
Confidence 556666553 3789999999999988888777766 8999999999998851000 0
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEE-EccCCC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICV-LTGHNH 164 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~-l~~h~~ 164 (641)
..-+..++.|.+||..+++.+.++... ......++|+|+++++++++. +++|.+||..+++.+.. +. +.+
T Consensus 74 ~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~ 152 (361)
T 2oiz_A 74 ITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG 152 (361)
T ss_dssp SSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT
T ss_pred cccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC
Confidence 000013678999999999988887632 245678999999999988863 68999999999998877 54 222
Q ss_pred CEEEEEEecCC-CEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCceeee----eeeeeeCCCeeEEEecC
Q psy9327 165 YVMCAQFHPTD-DIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWKYC----KPVKYCNPKHTLHICNR 238 (641)
Q Consensus 165 ~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~~~----~~l~s~~~d~~I~i~d~ 238 (641)
...+.+.|++ ..+++.+.||++.+|++.. ++....... ..+.. ....|++... ..+...+.++.+.++|.
T Consensus 153 -~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~ 228 (361)
T 2oiz_A 153 -CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS--KQMFS-VKDDPIFIAPALDKDKAHFVSYYGNVYSADF 228 (361)
T ss_dssp -EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC--CCCSC-TTTSCBCSCCEECSSEEEEEBTTSEEEEEEC
T ss_pred -cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc--cceEc-CCCCceEEEecccCCEEEEEeCCCeEEEEEe
Confidence 2335677876 6888999999999999865 443311100 00000 0001111000 01222335667888884
Q ss_pred CCcce---eeec--------CC---cceEEEEEcCCccEEEEecC-----------CeEEEEEcCCCCeE-ecccc--ce
Q psy9327 239 KMEPL---CNIH--------EN---TRVKSGAWDESGVFIYTTSN-----------HIKYAIVNGDHGII-RTLDL--PI 290 (641)
Q Consensus 239 ~~~~~---~~~~--------~~---~~I~sla~~p~g~~L~t~s~-----------~~k~~l~~~~~g~I-~~~d~--p~ 290 (641)
..... ..+. .. .....++++|++..++.+.. ...+.+|+..++.+ ..+.. |.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~p~ 308 (361)
T 2oiz_A 229 SGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRDAL 308 (361)
T ss_dssp SSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTTCC
T ss_pred cCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCCee
Confidence 32211 1110 00 11112689999888887643 34788998877653 33322 32
Q ss_pred E-EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 291 Y-ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 291 ~-~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
. .+..+|..+++.+. +.+.+|+..+.
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 2 24567889998887 99999988876
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=3.5e-12 Score=134.71 Aligned_cols=239 Identities=8% Similarity=-0.016 Sum_probs=142.3
Q ss_pred EEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
.+.|+|||++|+.++.++.|.+||..+++....+..+.+ |+|++..++..+......... ......|+....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~~~~~~~~~~~~~--~~~~~spdg~~~ 156 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVANSDCTKLVGIEI--LKRDWQPLTSWE 156 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEECTTSSEEEEEEE--EGGGCCCCCSHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEEeccCCccccccc--cccccCCCCcce
Confidence 378999999999999999999999988865444443333 555555555443111100000 001112222111
Q ss_pred EEEe----eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc-CCCEEEEEeCC------CeEEEEECCCCeeEEEEccC
Q psy9327 94 KSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH-EYPWILSASDD------QTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 94 ~~~~----s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D------g~I~vWd~~~~~~i~~l~~h 162 (641)
.... ..+..|.+||+.+++..... .+...+..+.|+| ++..|+.++.+ ..|.+||...++.. .+..+
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~ 234 (396)
T 3c5m_A 157 KFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH 234 (396)
T ss_dssp HHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC
T ss_pred eeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc
Confidence 1111 35678999999988765544 4677899999999 78877766543 46889998765533 33333
Q ss_pred --CCCEEEEEEecCCCEEEEEeCC-----CeEEEEecCCCceeeeccCCCceeeeccc-CCCceeeeeeeeee-------
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLD-----QTIRVWDISGLRKKNVAPGMGKLVLSMKS-KHPIWKYCKPVKYC------- 227 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~~~~~~~~~~~v~s~~~-~~~v~~~~~~l~s~------- 227 (641)
...+..+.|+|+|+.|+.++.+ +.|++||+.+++........+.. ..... .... ++..
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~------l~~~~~~~p~~ 307 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSL------MVGDGCDAPVD 307 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSE------EEEEECCC---
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCce------EEEecCCccee
Confidence 2358889999999987776554 45999999887654332211111 11111 1111 1111
Q ss_pred ---------CCCeeEEEecCCCcceeeecC-Cc-----------ceEEEEEcCCccEEEEecC
Q psy9327 228 ---------NPKHTLHICNRKMEPLCNIHE-NT-----------RVKSGAWDESGVFIYTTSN 269 (641)
Q Consensus 228 ---------~~d~~I~i~d~~~~~~~~~~~-~~-----------~I~sla~~p~g~~L~t~s~ 269 (641)
..+..|.+||........+.. .. .+.+.+|+|+|..|+.++.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 134689999944332223322 22 2566899999998887663
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.2e-11 Score=130.94 Aligned_cols=152 Identities=6% Similarity=0.007 Sum_probs=121.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc----------cccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL----------LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~----------l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
.+++.|++++.+.++++|+.++ +++|+...... ......+.+ |+.++| ++.+|+++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~---------- 103 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS---------- 103 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE----------
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE----------
Confidence 3699999999999999999986 66699764431 111223556 999999 88999988
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l 159 (641)
.++.|++||+.+.........|..++.++.+.+.. +++++.||.+.+||++++....
T Consensus 104 -------------------~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 104 -------------------TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp -------------------ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE--
T ss_pred -------------------cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc--
Confidence 47899999998776666677788889888776553 9999999999999999887643
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce--eeecc
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK--KNVAP 202 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~ 202 (641)
+...|+|++|||+| ++.|..||++++|+..+... +.+++
T Consensus 161 --~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~ 201 (388)
T 1xip_A 161 --LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFS 201 (388)
T ss_dssp --EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred --ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceec
Confidence 44689999999999 67899999999999988764 44443
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.36 E-value=1.3e-10 Score=118.00 Aligned_cols=210 Identities=9% Similarity=-0.020 Sum_probs=151.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
.+++|++++.|+.|++||.++|+.+.++..+. ..+.+++++|+|+++++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs------------------------------ 53 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS------------------------------ 53 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE------------------------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe------------------------------
Confidence 45789999999999999998999999998776 57899999999998883
Q ss_pred CCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeeEEEEc------cCCCCEEEEE
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCICVLT------GHNHYVMCAQ 170 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~~l~------~h~~~V~sl~ 170 (641)
.++.|..||. +|+.+..+..+. ..+.++.+.++|..+++.+. ++.|..+|. +++.+..+. ++......+.
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 4677999998 899999998753 57889999999999999887 888888885 677666654 2223455667
Q ss_pred EecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecCC
Q psy9327 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHEN 249 (641)
Q Consensus 171 fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~~ 249 (641)
+.++|+++++.+.++.|..||.. ++.+-.+...+........... ..+.++..++.|..+|.. ++.+..+...
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG-----DCLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTS-----CEEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCC-----CEEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 89999999999999999999998 7776665532111110000000 013334455667777755 6666555421
Q ss_pred -------cceEEEEEcCCccEEEEe
Q psy9327 250 -------TRVKSGAWDESGVFIYTT 267 (641)
Q Consensus 250 -------~~I~sla~~p~g~~L~t~ 267 (641)
..+.+++..++|..+++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCccccccccceEcCCCCEEEEe
Confidence 125566666776666554
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=4.3e-11 Score=138.59 Aligned_cols=257 Identities=9% Similarity=0.007 Sum_probs=158.5
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC-----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN-----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d-----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
|...+.+++|||||++||.++.+ .+|++||+.+++.+.. ..+...+.+++|+|| ..|+.+..... ..+
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~--~~~--- 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEP--KEG--- 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCc--ccc---
Confidence 33468899999999999877654 3599999999976543 122223357899999 88887751000 000
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc--cCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCC
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL--GHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSR 153 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~ 153 (641)
...........|.+|++.++.. ...+. .+...+..+.|+|+|++|+..+.++ .|++||+.++
T Consensus 234 ---------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 234 ---------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp --------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred ---------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 0000001134699999987652 23333 3444688999999999888777544 8999999877
Q ss_pred --eeEEEEccCCCCEEEEEEecCCCEEEEEeCC----CeEEEEecCCC--ceeeeccCCCceeeecccCCCceeeeeeee
Q psy9327 154 --NCICVLTGHNHYVMCAQFHPTDDIVVSASLD----QTIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 154 --~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D----gtI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
++...+..+...+.... +|+|..|+..+.+ +.|.+||+.++ +....++.....+.++..... .-+.
T Consensus 305 ~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~-----~lv~ 378 (741)
T 1yr2_A 305 KIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGN-----RLFA 378 (741)
T ss_dssp EECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBT-----EEEE
T ss_pred CCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECC-----EEEE
Confidence 32455666666665554 4889888877764 45999999874 334444443333322211110 1133
Q ss_pred eeCCCeeEEEe--cCCCcceeeec--CCcceEEEEEcCCccEEEE----ecCCeEEEEEcCCCCeEecc
Q psy9327 226 YCNPKHTLHIC--NRKMEPLCNIH--ENTRVKSGAWDESGVFIYT----TSNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 226 s~~~d~~I~i~--d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t----~s~~~k~~l~~~~~g~I~~~ 286 (641)
+...++..++| +..+.....+. +...+..++++|++..++. ....+.+++|+..++..+.+
T Consensus 379 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 379 SYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 44445554554 44444444443 3567888999998775552 23467889998888776655
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.33 E-value=3.9e-11 Score=124.71 Aligned_cols=158 Identities=8% Similarity=0.081 Sum_probs=127.4
Q ss_pred cCCCCeEEEEEcc-CCCeEEEEe-CCCcEEEEECccCcccccccc----------cccCeEEEEEeCC-CCEEEEeceee
Q psy9327 7 TKSARVKGLSFHP-KRPWILSSL-HNGVIQLWDYRMNTLLEKFDE----------HEGPVRGICFHNQ-QPIFVSGGKMI 73 (641)
Q Consensus 7 ~H~~~V~~l~fsp-dg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~----------h~~~V~~i~fsp~-~~~l~sgs~~~ 73 (641)
++-....+++|+| ++.++++.+ .++.|++|| .+++.+..+.. +-....+|+++|+ +.++++..
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--- 215 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--- 215 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---
Confidence 4555789999999 788888886 699999999 56777766643 2234899999998 66656655
Q ss_pred EEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEE-------eCCCe
Q psy9327 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSA-------SDDQT 144 (641)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sg-------s~Dg~ 144 (641)
.++.|++||..+|+.+.++. .+...+.+++|+| +..+++. +.+.+
T Consensus 216 -------------------------~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 216 -------------------------ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp -------------------------TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCC
T ss_pred -------------------------CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcE
Confidence 88999999999899888884 4667889999999 4334433 33458
Q ss_pred EEEEECCCCeeEEEE---ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 145 IRIWYWQSRNCICVL---TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 145 I~vWd~~~~~~i~~l---~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
|++||..+++.+..+ .++...+..++++|+|.++++.+.+++|++|++..
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999999999888 46788899999999998889999999999999865
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.30 E-value=1.3e-08 Score=102.66 Aligned_cols=241 Identities=9% Similarity=-0.002 Sum_probs=161.6
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccc-cccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE-KFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~-~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.....+.+++++++|.+.++...++.|..||.. ++... .+..+...+.++++.+++.+.++..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 80 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN--------------- 80 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET---------------
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec---------------
Confidence 345688999999999977777778999999977 54332 1223346789999999998777765
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~~h~ 163 (641)
.++.|..||.. ++... ........+.++++.+++.++++...++.|..||.. ++... .+....
T Consensus 81 -------------~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 145 (300)
T 2qc5_A 81 -------------GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKG 145 (300)
T ss_dssp -------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred -------------CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCC
Confidence 67899999988 65432 223344678999999999988888778999999987 55432 233345
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.++++.+++.+.++...++.|..||. +++.... .+........+. ....+| .+....+.|..+|..+
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~------v~~~~~~~i~~~~~~g 218 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALW------FVEIMGNKIGRITTTG 218 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEE------EEETTTTEEEEECTTC
T ss_pred CCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEE------EEccCCCEEEEEcCCC
Confidence 67899999999997777777889999998 4443322 222112222211 111121 1222455688888643
Q ss_pred cceee-ec-CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecc
Q psy9327 241 EPLCN-IH-ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 241 ~~~~~-~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~ 286 (641)
..... .. ....+.+++++++|...++...++.+..++. ++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 219 EISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred cEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 32222 11 2456789999999985555556678888876 4555544
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.27 E-value=4.3e-09 Score=117.54 Aligned_cols=237 Identities=9% Similarity=0.068 Sum_probs=164.7
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECc--cCcccccccccccCeEEEEEe----CCCCEEEEeceeeEEeeeceeeec
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYR--MNTLLEKFDEHEGPVRGICFH----NQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~--~~~~l~~~~~h~~~V~~i~fs----p~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
.+.++.|+|||+++++++.||.|.+||+. +++.+.++....+ ...++|+ |+|+++++++.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~------------- 263 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAY------------- 263 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEE-------------
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEc-------------
Confidence 56799999999999999999999999995 7777777765443 5789999 69999999873
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----------CCC-CeEEEEEccCCCE-EEEEeCCCeEEEEECCC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----------HLD-YIRTTFFHHEYPW-ILSASDDQTIRIWYWQS 152 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----------h~~-~V~~v~fsp~~~~-l~sgs~Dg~I~vWd~~~ 152 (641)
.+++|.|+|..+.+.+.++.. |.. .+..+.++++++. +++..++|.|.++|+.+
T Consensus 264 --------------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 264 --------------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp --------------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred --------------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 789999999999998887652 222 6788999998774 45556779999999987
Q ss_pred CeeE--EEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeeccC-C-----Cceeeecc-cCCCceeeee
Q psy9327 153 RNCI--CVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVAPG-M-----GKLVLSMK-SKHPIWKYCK 222 (641)
Q Consensus 153 ~~~i--~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~~~-~-----~~~v~s~~-~~~~v~~~~~ 222 (641)
.+.. ..+ ........+.|+|+++++++++ .+++|.++|..+++.....+. . +....-.. ...++|.
T Consensus 330 ~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~--- 405 (567)
T 1qks_A 330 LNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA--- 405 (567)
T ss_dssp SSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE---
T ss_pred Cccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE---
Confidence 5422 222 2345677889999999877665 578999999999887665542 1 00110000 0122221
Q ss_pred eeeeeCCCeeEEEecCC--------CcceeeecCC-cceEEEEEcCCccEEEEecC-------CeEEEEEcCCCC
Q psy9327 223 PVKYCNPKHTLHICNRK--------MEPLCNIHEN-TRVKSGAWDESGVFIYTTSN-------HIKYAIVNGDHG 281 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~~--------~~~~~~~~~~-~~I~sla~~p~g~~L~t~s~-------~~k~~l~~~~~g 281 (641)
.+...++.|.++|.. .+.+..+... ..-.-+..+|++.++|.... ...+.+++..+.
T Consensus 406 --t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 406 --TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp --EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred --eCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 112256789999833 3344554432 22233678999999998662 246777775544
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.26 E-value=2.1e-09 Score=111.67 Aligned_cols=237 Identities=9% Similarity=-0.048 Sum_probs=157.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....++.++ ++.+.++...++.|.+||..+++.+.++. .......+++++++...++..
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~------------------- 102 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQI------------------- 102 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEB-------------------
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEEC-------------------
Confidence 346778875 34455566668999999999999888884 456788999999986555553
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEEEEccCC
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
.++.|.+||..+++...++.... .....+++ .++.++++.. .+++|.+||..+++.+.++...
T Consensus 103 ---------~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g- 171 (328)
T 3dsm_A 103 ---------WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG- 171 (328)
T ss_dssp ---------SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-
T ss_pred ---------CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-
Confidence 68999999999999887776433 14556777 4454455544 4899999999999988777643
Q ss_pred CCEEEEEEecCCCEEEEEeCC----------CeEEEEecCCCceeeeccCC-Cceeeec--ccCCCceeeeeeeeeeCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLD----------QTIRVWDISGLRKKNVAPGM-GKLVLSM--KSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~D----------gtI~IWD~~~~~~~~~~~~~-~~~v~s~--~~~~~v~~~~~~l~s~~~d 230 (641)
.....+.++|+|++++++..+ +.|.+||..+++....+... +.....+ ...... +..+..
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~------lyv~~~- 244 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT------LYWINN- 244 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE------EEEESS-
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE------EEEEcc-
Confidence 345688999999987777665 79999999988776554311 1111111 111110 111112
Q ss_pred eeEEEecCCCccee---eecC-CcceEEEEEcCCccEEEEe-----cCCeEEEEEcCCCCeEecc
Q psy9327 231 HTLHICNRKMEPLC---NIHE-NTRVKSGAWDESGVFIYTT-----SNHIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 231 ~~I~i~d~~~~~~~---~~~~-~~~I~sla~~p~g~~L~t~-----s~~~k~~l~~~~~g~I~~~ 286 (641)
.+.++|.....+. .+.. ......++++|++..++.+ ..++.+.+|+.+...+..+
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i 308 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEF 308 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEE
T ss_pred -EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEE
Confidence 7888884322221 1222 4567889999954445444 4678888888774445444
No 194
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.25 E-value=9.9e-10 Score=126.46 Aligned_cols=241 Identities=12% Similarity=0.029 Sum_probs=147.6
Q ss_pred cCCCeEEEEeCC-C----cEEEEECccCcccc-----cc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 19 PKRPWILSSLHN-G----VIQLWDYRMNTLLE-----KF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 19 pdg~~Lasg~~d-g----~I~iWD~~~~~~l~-----~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
|+|.+++....+ + .+.+.+...++... .+ .+|...+.+++|||||++|+.+...
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~--------------- 145 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA--------------- 145 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE---------------
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC---------------
Confidence 889987765433 2 23333433343211 11 2344578999999999999987510
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe----------------EEEEECC
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT----------------IRIWYWQ 151 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~----------------I~vWd~~ 151 (641)
.++....|++||+.+++.+.....+ ..+..++|+||++.|+.++.|+. |++|++.
T Consensus 146 --------~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~ 216 (710)
T 2xdw_A 146 --------SGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG 216 (710)
T ss_dssp --------TTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT
T ss_pred --------CCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC
Confidence 0011238999999999876643222 23667999999999999888766 9999998
Q ss_pred CCe----eEEEEccCCCCEEEEEEecCCCEEEEEeC-----CCeEEEEecCC------Cc-eeeeccCCCceeeecccCC
Q psy9327 152 SRN----CICVLTGHNHYVMCAQFHPTDDIVVSASL-----DQTIRVWDISG------LR-KKNVAPGMGKLVLSMKSKH 215 (641)
Q Consensus 152 ~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~-----DgtI~IWD~~~------~~-~~~~~~~~~~~v~s~~~~~ 215 (641)
+++ .+.....|...+..+.|+|||++|+.++. +..|++||+.+ +. ....+..+...+..
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~----- 291 (710)
T 2xdw_A 217 TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD----- 291 (710)
T ss_dssp SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-----
T ss_pred CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-----
Confidence 865 33333345667889999999999887765 67899999976 42 23333322211111
Q ss_pred Cceeeee-eeee-eC---CCeeEEEecCCC-c--ceeee-cCC--cceEEEEEcCCccEEEEecCCe--EEEEEcCCCC-
Q psy9327 216 PIWKYCK-PVKY-CN---PKHTLHICNRKM-E--PLCNI-HEN--TRVKSGAWDESGVFIYTTSNHI--KYAIVNGDHG- 281 (641)
Q Consensus 216 ~v~~~~~-~l~s-~~---~d~~I~i~d~~~-~--~~~~~-~~~--~~I~sla~~p~g~~L~t~s~~~--k~~l~~~~~g- 281 (641)
.|.... .+.. .. ....|.+||... . .+..+ .+. ..+.+++|++++.++++...++ ++++++..+|
T Consensus 292 -~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 292 -YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp -EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred -EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 111000 0111 11 245688888432 2 22332 332 3678899998888888887665 5666776444
Q ss_pred eEeccccc
Q psy9327 282 IIRTLDLP 289 (641)
Q Consensus 282 ~I~~~d~p 289 (641)
.++.+..+
T Consensus 371 ~~~~l~~~ 378 (710)
T 2xdw_A 371 LLKIFPLE 378 (710)
T ss_dssp EEEEECCC
T ss_pred EEEecCCC
Confidence 35555543
No 195
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.24 E-value=2.4e-09 Score=109.82 Aligned_cols=232 Identities=8% Similarity=0.028 Sum_probs=151.9
Q ss_pred eeeccCCCCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 3 TKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
..+..+.....+..|+|+|+ +++++..++.|..|+. +++ ...+..+...+.+++++++|.++++..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~----------- 104 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEH----------- 104 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEET-----------
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEEC-----------
Confidence 34555566778999999998 5667777899999997 454 455666778899999999999776664
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEE----EeC------------
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILS----ASD------------ 141 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~s----gs~------------ 141 (641)
.++.|.+||.. ++........ ...+.+++++|+|.++++ |..
T Consensus 105 -----------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 105 -----------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp -----------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred -----------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 56789999986 5533222111 234678999999998886 332
Q ss_pred -CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCC------CeEEEEecCCCcee--eeccCC-Cce--ee
Q psy9327 142 -DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD------QTIRVWDISGLRKK--NVAPGM-GKL--VL 209 (641)
Q Consensus 142 -Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~D------gtI~IWD~~~~~~~--~~~~~~-~~~--v~ 209 (641)
.+.|..||..+++..... .......++|+|++..|+.+..+ +.|.+||+...... ..+... ... -+
T Consensus 167 ~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi 244 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF 244 (305)
T ss_dssp SCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred CCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence 356888887666644333 44567889999999987777665 78999998754310 111000 000 00
Q ss_pred ecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEE
Q psy9327 210 SMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275 (641)
Q Consensus 210 s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l 275 (641)
....... +..+.. +.|.+|+..+..+..+.....+.+++|++++..|+.++.++-+.+
T Consensus 245 ~~d~~G~-------lwv~~~-~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 245 CVDRGGW-------LWSSSG-TGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECTTSC-------EEECCS-SEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EECCCCC-------EEEecC-CcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 1111111 222222 348888877776666665556788888888888887776655444
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.24 E-value=2.3e-10 Score=131.50 Aligned_cols=270 Identities=8% Similarity=-0.027 Sum_probs=160.9
Q ss_pred EccCCCeEEEEeCCC---cEEEEEC--ccCcccccc------cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 17 FHPKRPWILSSLHNG---VIQLWDY--RMNTLLEKF------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 17 fspdg~~Lasg~~dg---~I~iWD~--~~~~~l~~~------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+|+|.+++....++ .-.+|-. ..++...-+ ++|...+.+++|||||++|+.+..
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~-------------- 140 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQK-------------- 140 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEE--------------
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEEC--------------
Confidence 348899888776544 3445543 334321111 235567999999999999985531
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCe--EEEEEccCCCEEEEEeCCCe-------------EEEEEC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYI--RTTFFHHEYPWILSASDDQT-------------IRIWYW 150 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V--~~v~fsp~~~~l~sgs~Dg~-------------I~vWd~ 150 (641)
..++.+.+|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|.. |++|++
T Consensus 141 ---------~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l 209 (695)
T 2bkl_A 141 ---------PNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTL 209 (695)
T ss_dssp ---------ETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEET
T ss_pred ---------CCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEEC
Confidence 011256799999999998641 1122223 67899999999999998776 999999
Q ss_pred CCCe----eEEEEccCCCCEEEEEEecCCCEEEEEeCCC----eEEEEecCCCceeeeccCCCceeeecccCCCceeeee
Q psy9327 151 QSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASLDQ----TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222 (641)
Q Consensus 151 ~~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg----tI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~ 222 (641)
.++. ++....+|...+.++.|+|+|++|+.++.++ .|.+||..++..................... +
T Consensus 210 ~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~---l-- 284 (695)
T 2bkl_A 210 GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR---F-- 284 (695)
T ss_dssp TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE---E--
T ss_pred CCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc---E--
Confidence 8775 4444445667899999999999888877666 6777776555433333322211111110111 1
Q ss_pred eeeeeC---CCeeEEEecCC-Ccc---eeeecC--CcceEEEEEcCCccEEEEecCCeEEEE--EcCCCCeEeccccc--
Q psy9327 223 PVKYCN---PKHTLHICNRK-MEP---LCNIHE--NTRVKSGAWDESGVFIYTTSNHIKYAI--VNGDHGIIRTLDLP-- 289 (641)
Q Consensus 223 ~l~s~~---~d~~I~i~d~~-~~~---~~~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l--~~~~~g~I~~~d~p-- 289 (641)
+.... .++.|.+||.. ... ...+.+ ...+.+++|+ ++..+++...++...+ ++.+.+.++.+..|
T Consensus 285 -~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 362 (695)
T 2bkl_A 285 -YVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGV 362 (695)
T ss_dssp -EEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSS
T ss_pred -EEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCC
Confidence 11111 36789999843 221 222222 4467888888 5677777776665544 44444455555443
Q ss_pred eEE----EEEcCcEEE-EEe---CCCCeEEEEeCCcc
Q psy9327 290 IYI----TKIKGNQVY-YLD---RECSPHVLRIDPTE 318 (641)
Q Consensus 290 ~~~----~~~~g~~v~-~~~---~dg~i~v~~~~~~~ 318 (641)
.++ +..++..++ ..+ ..+.++.|++.+++
T Consensus 363 ~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 363 GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 111 112344444 222 33566777766544
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.22 E-value=4.3e-09 Score=106.64 Aligned_cols=178 Identities=8% Similarity=-0.025 Sum_probs=134.5
Q ss_pred CCCeEEEEECCCCeeEEEEccCC-CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-CCCEEEEEEecCCC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH-NHYVMCAQFHPTDD 176 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h-~~~V~sl~fsp~g~ 176 (641)
.|+.|.+||.++|+.+.++..+. ..+.+++++|+|++++ +.++.|..||. +++.+..+..+ ...+.++.+.|+|.
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence 99999999999999999998876 4788999999999888 45788999998 89888888865 35788999999999
Q ss_pred EEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeee-----eeeeeeCCCeeEEEecCCCcceeeecCCc
Q psy9327 177 IVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----KPVKYCNPKHTLHICNRKMEPLCNIHENT 250 (641)
Q Consensus 177 ~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~-----~~l~s~~~d~~I~i~d~~~~~~~~~~~~~ 250 (641)
.+++.+. ++.+..+|. .++.+..+..... +. ....+...+. .-+.+...++.|..||..++.+..+....
T Consensus 90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~-~~--~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~ 165 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETG-IE--RPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG 165 (276)
T ss_dssp EEEEEESTTEEEEEECT-TSCEEEEEEECCS-CS--SGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSS
T ss_pred EEEEecCCCCEEEEEeC-CCCEEEEEeccCC-CC--cccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCC
Confidence 9999887 788888886 4554433321000 00 0000000000 01455667899999997788888887766
Q ss_pred ceEEEEEcCCccEEEEecCCeEEEEEcCCCCeE
Q psy9327 251 RVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 251 ~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I 283 (641)
...++...++|..+++++.++++..++.++|.+
T Consensus 166 ~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 166 TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 777888899999999998888999999886654
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.22 E-value=2.5e-09 Score=111.02 Aligned_cols=248 Identities=9% Similarity=-0.029 Sum_probs=161.3
Q ss_pred CCCcEEEEECccCccccccc------ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 29 HNGVIQLWDYRMNTLLEKFD------EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 29 ~dg~I~iWD~~~~~~l~~~~------~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
.+++|.+||..+++....+. .......++++.. +...++.. .++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~----------------------------~~~~ 65 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVN----------------------------NSHV 65 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEG----------------------------GGTE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEc----------------------------CCCE
Confidence 37899999999988765442 1223467788753 34444444 6899
Q ss_pred EEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC-----CCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN-----HYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~-----~~V~sl~fsp~g~~ 177 (641)
|.+||..+++.+.++. .......+++++++.++++...++.|.+||..+++....+.... .....+++ .++.+
T Consensus 66 v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~l 143 (328)
T 3dsm_A 66 IFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYV 143 (328)
T ss_dssp EEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEE
T ss_pred EEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEE
Confidence 9999999999988885 45678899999998666666589999999999998877765332 14556777 34444
Q ss_pred EEEEe-CCCeEEEEecCCCceeeeccCCCce-eeecccCCCceeeeeeeeeeCC----------CeeEEEecCC-Cccee
Q psy9327 178 VVSAS-LDQTIRVWDISGLRKKNVAPGMGKL-VLSMKSKHPIWKYCKPVKYCNP----------KHTLHICNRK-MEPLC 244 (641)
Q Consensus 178 lvSgs-~DgtI~IWD~~~~~~~~~~~~~~~~-v~s~~~~~~v~~~~~~l~s~~~----------d~~I~i~d~~-~~~~~ 244 (641)
+++.. .+++|.+||..+++....++....+ -+.+.....+| .++.. .+.|.++|.. .+...
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~------v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMW------TITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEE------EEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEE------EEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 44443 4899999999998877665421111 01111111121 11222 2689999944 44443
Q ss_pred eecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEec---c----ccceEEEEE-cCcEEEEEe-----CCCCe
Q psy9327 245 NIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT---L----DLPIYITKI-KGNQVYYLD-----RECSP 309 (641)
Q Consensus 245 ~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~---~----d~p~~~~~~-~g~~v~~~~-----~dg~i 309 (641)
.+.. +.....++++|++..++.+.. .+.+++.+++.+.. + ..|-.+.-. ++..++..+ .++.+
T Consensus 218 ~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 218 QFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp EEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred EEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 4433 457889999999999998776 77788877776531 1 223333222 355565554 56777
Q ss_pred EEEEeC
Q psy9327 310 HVLRID 315 (641)
Q Consensus 310 ~v~~~~ 315 (641)
.+|+.+
T Consensus 296 ~v~d~~ 301 (328)
T 3dsm_A 296 YRYSPQ 301 (328)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 777766
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=5.9e-09 Score=106.33 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=151.6
Q ss_pred eccCCCCeEEEEEccCCCeEEE-------EeCCCcEEEEECccCcccccccc-----cccCeEEEEEeCC-CCEEEEece
Q psy9327 5 FETKSARVKGLSFHPKRPWILS-------SLHNGVIQLWDYRMNTLLEKFDE-----HEGPVRGICFHNQ-QPIFVSGGK 71 (641)
Q Consensus 5 ~~~H~~~V~~l~fspdg~~Las-------g~~dg~I~iWD~~~~~~l~~~~~-----h~~~V~~i~fsp~-~~~l~sgs~ 71 (641)
+...-....+++|+++|.++++ +..++.|..||..+++.. .+.. +...+.+++++++ +.++++..
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~- 90 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADM- 90 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEET-
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEEC-
Confidence 3344456789999999987777 577899999998777643 2322 5578999999999 76555553
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-Ecc----CCCCeEEEEEccCCCEEEEEeCC----
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLG----HLDYIRTTFFHHEYPWILSASDD---- 142 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~----h~~~V~~v~fsp~~~~l~sgs~D---- 142 (641)
+..|.+||.. ++.... ... +...+.++++++++.++++...+
T Consensus 91 ----------------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 141 (314)
T 1pjx_A 91 ----------------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAP 141 (314)
T ss_dssp ----------------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTT
T ss_pred ----------------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccc
Confidence 4479999988 765433 221 12358899999999988877665
Q ss_pred -----------CeEEEEECCCCeeEEEEccCCCCEEEEEEe----cCCCEE-EEEeCCCeEEEEecC-CCce-----eee
Q psy9327 143 -----------QTIRIWYWQSRNCICVLTGHNHYVMCAQFH----PTDDIV-VSASLDQTIRVWDIS-GLRK-----KNV 200 (641)
Q Consensus 143 -----------g~I~vWd~~~~~~i~~l~~h~~~V~sl~fs----p~g~~l-vSgs~DgtI~IWD~~-~~~~-----~~~ 200 (641)
+.|..||.. ++... +..+......++|+ |+++.+ ++.+.++.|.+||.. +++. ...
T Consensus 142 ~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 142 ADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp SCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred ccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence 577788765 54433 33344567889999 999655 445568999999986 3331 122
Q ss_pred ccCCC-ceeeec--ccCCCceeeeeeeeeeCCCeeEEEecCC-CcceeeecC-CcceEEEEEcCCccEEEEec-CCeEEE
Q psy9327 201 APGMG-KLVLSM--KSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHE-NTRVKSGAWDESGVFIYTTS-NHIKYA 274 (641)
Q Consensus 201 ~~~~~-~~v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d~~-~~~~~~~~~-~~~I~sla~~p~g~~L~t~s-~~~k~~ 274 (641)
+++.. .....+ .....+| .+...++.|..||.. +.....+.. ...+.+++++++|..|+.++ .++.+.
T Consensus 220 ~~~~~~~~p~~i~~d~~G~l~------v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDEDNNLL------VANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp CCCCSSCEEEEEEEBTTCCEE------EEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCCCCCCceEECCCCCEE------EEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence 22211 111111 1111121 222356788899855 555444443 36788999999998666554 445555
Q ss_pred EEcCC
Q psy9327 275 IVNGD 279 (641)
Q Consensus 275 l~~~~ 279 (641)
.++.+
T Consensus 294 ~~~~~ 298 (314)
T 1pjx_A 294 KFEWQ 298 (314)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 55543
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.17 E-value=3.6e-08 Score=99.36 Aligned_cols=230 Identities=8% Similarity=-0.005 Sum_probs=152.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+...+.+++++++|.+.++...++.|..||.. ++. ..+. .....+.++++.|++.+.++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 117 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEM--------------- 117 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEET---------------
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEec---------------
Confidence 45679999999999987777778899999975 332 2232 2455789999999998888775
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE-EccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~-l~~h~ 163 (641)
.++.|.+||. +++.... ...+...+.++++++++.++++...++.|..||. +++.... +..+.
T Consensus 118 -------------~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 182 (299)
T 2z2n_A 118 -------------NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPA 182 (299)
T ss_dssp -------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred -------------CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCC
Confidence 6889999998 5554332 3335567899999999998888877899999998 6654432 33455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.+++++++|.+.++...++.|.+||. +++.... .+.....+.++.. ...+| .+...++.|..+|..+
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~------v~~~~~~~i~~~d~~g 255 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW------FTEWGANKIGRLTSNN 255 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE------EEETTTTEEEEEETTT
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE------EeccCCceEEEECCCC
Confidence 67899999999998877777889999999 5543322 2212222222211 11122 2222467788888543
Q ss_pred cceeeec---CCcceEEEEEcCCccEEEEecCCeEEEEEcCC
Q psy9327 241 EPLCNIH---ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279 (641)
Q Consensus 241 ~~~~~~~---~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~ 279 (641)
. +..+. ....+.++++ ++|...++++. +.+..++.+
T Consensus 256 ~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~~ 294 (299)
T 2z2n_A 256 I-IEEYPIQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTLI 294 (299)
T ss_dssp E-EEEEECSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEEC
T ss_pred c-eEEEeCCCCCCccceEEe-cCCCEEEEecC-CcEEEEEcC
Confidence 2 22221 2356788888 77776555443 344444433
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=9.6e-09 Score=114.75 Aligned_cols=225 Identities=14% Similarity=0.093 Sum_probs=163.6
Q ss_pred cCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
|.+.++++...+++|.++|..+++.+.++.. ...+.++.|+||++++++++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~---------------------------- 215 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIG---------------------------- 215 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEE----------------------------
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEc----------------------------
Confidence 4455667777899999999999998888753 33567999999999999987
Q ss_pred CCCeEEEEECC--CCeeEEEEccCCCCeEEEEEc----cCCCEEEEEe-CCCeEEEEECCCCeeEEEEcc----------
Q psy9327 99 DDYKIKVWNYK--QRKCIFTLLGHLDYIRTTFFH----HEYPWILSAS-DDQTIRIWYWQSRNCICVLTG---------- 161 (641)
Q Consensus 99 ~Dg~I~vWD~~--t~~~~~~~~~h~~~V~~v~fs----p~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~---------- 161 (641)
.|+.|.+||+. +++.+.++.... ..+.++|+ |+|+++++++ .+++|.++|..+.+.+.++.-
T Consensus 216 ~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred CCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence 89999999996 888888887544 45789999 6999877665 469999999999988877642
Q ss_pred CCC-CEEEEEEecCCC-EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCC
Q psy9327 162 HNH-YVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK 239 (641)
Q Consensus 162 h~~-~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~ 239 (641)
|.. .+..+.+++++. ++++...+|.|.++|....+....
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v--------------------------------------- 335 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT--------------------------------------- 335 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE---------------------------------------
T ss_pred cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee---------------------------------------
Confidence 222 677888888765 455566678999999876331110
Q ss_pred CcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEe-cccc----c-----eEEEEEcCcEEEEEe--CC
Q psy9327 240 MEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIR-TLDL----P-----IYITKIKGNQVYYLD--RE 306 (641)
Q Consensus 240 ~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~-~~d~----p-----~~~~~~~g~~v~~~~--~d 306 (641)
..+........+.|+|+|+++++++ ...++.+++..++.+. .++. | ....+.++..++..+ .+
T Consensus 336 ----~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~ 411 (567)
T 1qks_A 336 ----TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD 411 (567)
T ss_dssp ----EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS
T ss_pred ----eeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC
Confidence 1111234455689999999988766 5678888998887643 3333 2 122344556777654 46
Q ss_pred CCeEEEEeCC
Q psy9327 307 CSPHVLRIDP 316 (641)
Q Consensus 307 g~i~v~~~~~ 316 (641)
+.+.++..++
T Consensus 412 ~~Vsvid~~~ 421 (567)
T 1qks_A 412 DSVALIGTDP 421 (567)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEecCCC
Confidence 7899998886
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.16 E-value=8.1e-09 Score=109.01 Aligned_cols=283 Identities=8% Similarity=-0.006 Sum_probs=177.6
Q ss_pred EEEccCCCeEEEEeC-----CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 15 LSFHPKRPWILSSLH-----NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 15 l~fspdg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....|+++++++... ++.|.+.|..+++.+.++..-..+ . ++++|+++++.++.....-
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r-------------- 101 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSR-------------- 101 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEE--------------
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccc--------------
Confidence 456789998888865 689999999999999888765666 4 9999999988777410000
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------CCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEEEc
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------DYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~l~ 160 (641)
..-+..++.|.+||..+++.+.++.-.. .....++|+|+|++++.+.. ++.|.++|..+++.+.++.
T Consensus 102 ----~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 102 ----IARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp ----TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ----cccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 0000136789999999999988875321 24567999999998887763 6899999999999988885
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC-CceeeeccCCCceeeecccCCCcee-eeeeeeeeCCCeeEEEecC
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG-LRKKNVAPGMGKLVLSMKSKHPIWK-YCKPVKYCNPKHTLHICNR 238 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~-~~~~~~~~~~~~~v~s~~~~~~v~~-~~~~l~s~~~d~~I~i~d~ 238 (641)
-.. . ...+....+.+++.+.||++.+.++.. ++........-.........++.|. ....+...+.++.+.+.|.
T Consensus 178 v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~ 254 (386)
T 3sjl_D 178 VPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL 254 (386)
T ss_dssp CCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEEC
T ss_pred CCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEEC
Confidence 321 1 222333446777888899999999876 4432211110000000011122221 1112334455788898985
Q ss_pred CCcc---eeeec--------C---CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCe-EeccccceEE-
Q psy9327 239 KMEP---LCNIH--------E---NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGI-IRTLDLPIYI- 292 (641)
Q Consensus 239 ~~~~---~~~~~--------~---~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~-I~~~d~p~~~- 292 (641)
.... ...+. . ......+++++++..++.... ...+++.+..++. ++.+..+-..
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~ 334 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEID 334 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred CCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcc
Confidence 4332 11111 0 122334777898888887642 3578888887765 4555443211
Q ss_pred ---EEEcCc-EEEEEeC-CCCeEEEEeCCcchh
Q psy9327 293 ---TKIKGN-QVYYLDR-ECSPHVLRIDPTEFK 320 (641)
Q Consensus 293 ---~~~~g~-~v~~~~~-dg~i~v~~~~~~~~~ 320 (641)
...++. .+|+.++ ++.+.+++..+.+..
T Consensus 335 ~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 335 SINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 223454 6777665 788988887765543
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.14 E-value=5.9e-10 Score=118.10 Aligned_cols=134 Identities=10% Similarity=0.086 Sum_probs=111.7
Q ss_pred cCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
.+.+ |+.++| |+++|+++ .+|.|++||+++.........|..++.++.+.+.. ++++.
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~---------------- 143 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN---------------- 143 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE----------------
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEE----------------
Confidence 3566 999999 99999999 88999999998776555666788888888776543 66665
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee--EEEE-----
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC--ICVL----- 159 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~--i~~l----- 159 (641)
.||.+.+||++++.... +...|++++|||+| ++.|..||++++|+.....+ ..++
T Consensus 144 ------------~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 144 ------------SVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp ------------TTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH
T ss_pred ------------CCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc
Confidence 89999999999887643 45689999999999 78899999999999988776 6666
Q ss_pred -c---cCCCCEEEEEEecCCCEEEE
Q psy9327 160 -T---GHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 160 -~---~h~~~V~sl~fsp~g~~lvS 180 (641)
. +|...|.++.|.+++.++++
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEE
Confidence 3 47889999999999988876
No 204
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.14 E-value=2.6e-09 Score=108.65 Aligned_cols=184 Identities=9% Similarity=-0.065 Sum_probs=122.9
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccc----cccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE----HEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~----h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+.+..+...+.+++++|+|.++++...++.|.+||..+++....... ....+..++++|+|.++++.+..
T Consensus 62 ~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~------ 135 (296)
T 3e5z_A 62 SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTY------ 135 (296)
T ss_dssp EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSH------
T ss_pred EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcc------
Confidence 34556778899999999999887777778999999877764332221 12356789999999988873200
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-CCee--
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNC-- 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~-~~~~-- 155 (641)
|........ ........+.|..+|.. ++ ...+..+.....+++|+|+++.+++.+.++.|++||+. +++.
T Consensus 136 g~~~~~~~~-----~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 136 GIDKPEEGY-----GGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEY 208 (296)
T ss_dssp HHHCGGGSS-----CCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEE
T ss_pred ccccccccc-----cccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcC
Confidence 000000000 00000013456666655 44 34455577788999999999988888888999999987 4544
Q ss_pred -EEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 156 -i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
...+..+...+.+++++++|.+.++. ++.|.+||.. ++....+.
T Consensus 209 ~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred CCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 33344456677889999999876666 8899999987 55554444
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.5e-08 Score=108.71 Aligned_cols=215 Identities=10% Similarity=0.024 Sum_probs=141.2
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....+++|+|+++++++...++.|+.||..+++..........+ . ++|+|++..+++++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d------------------- 189 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIG------------------- 189 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEB-------------------
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEe-------------------
Confidence 46889999999998788777899999999877654444332233 3 99999999888886
Q ss_pred ceeeEEEeeCCC--eEEEEECCCCeeEEEE----ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE----E
Q psy9327 90 LFRIKSVLGDDY--KIKVWNYKQRKCIFTL----LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV----L 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg--~I~vWD~~t~~~~~~~----~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~----l 159 (641)
.++ .|.+||...+.....+ ..+...+.+++++|++..|..+..++.|+.||..++..... .
T Consensus 190 ---------~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~ 260 (409)
T 3hrp_A 190 ---------WEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL 260 (409)
T ss_dssp ---------SSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC
T ss_pred ---------cCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccc
Confidence 444 8999998766544444 22456778999999555555577788999999987764322 2
Q ss_pred ccCCCCE-E-EEEEecC-CCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 160 TGHNHYV-M-CAQFHPT-DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 160 ~~h~~~V-~-sl~fsp~-g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.++...- . .++|+|+ +.++++-+.++.|+.||.... ...+.+... . .+..++
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~--------~----------~g~~dg----- 315 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSAT--------Q----------KTVQDG----- 315 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTT--------C----------CSCBCE-----
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCC--------C----------CCcCCC-----
Confidence 2222222 3 8999995 667777777899999997653 111111100 0 000000
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCCCeEec
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRT 285 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~g~I~~ 285 (641)
......-.....++++++|.+.++-+ .+.++..++..+|.+..
T Consensus 316 ------~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 316 ------LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp ------EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred ------cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 00000113456789999988666666 77888888766676653
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=7.9e-08 Score=101.74 Aligned_cols=275 Identities=11% Similarity=-0.009 Sum_probs=170.1
Q ss_pred EEccCCCeEEEEeC--CC---cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 16 SFHPKRPWILSSLH--NG---VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 16 ~fspdg~~Lasg~~--dg---~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
...|+++++++... .+ +|.++|..+++.+.++.....+ .++||||++++.++......
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~--------------- 89 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSR--------------- 89 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccc---------------
Confidence 34578887777653 22 8899999999988877655555 99999999999888510000
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEE-Ec
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICV-LT 160 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~-l~ 160 (641)
..-+..++.|.+||..+.+.+.++.-. ......++|+|+|++++.++. ++.|.++| .+++.+.. +.
T Consensus 90 ---~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 90 ---IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred ---cccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 000003678999999998887776422 133568999999999998874 58899999 99988777 54
Q ss_pred cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccC-----CCceeeecccCCCceeee-eeeeeeCCCeeE
Q psy9327 161 GHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPG-----MGKLVLSMKSKHPIWKYC-KPVKYCNPKHTL 233 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~-----~~~~v~s~~~~~~v~~~~-~~l~s~~~d~~I 233 (641)
- .. ++.+.|++ ..+++.+.||++.+||. +++....... ....+. .++.+... ..+......+.+
T Consensus 166 ~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~v 236 (373)
T 2mad_H 166 S-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL----TQPAQANKSGRIVWPVYSGKI 236 (373)
T ss_pred C-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee----ecceeEecCCEEEEEcCCceE
Confidence 2 22 24556665 46677888999999999 7765532210 000000 01100000 001122234566
Q ss_pred EEecCCCc---ceeeecC-----------CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCeE-ecccc
Q psy9327 234 HICNRKME---PLCNIHE-----------NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGII-RTLDL 288 (641)
Q Consensus 234 ~i~d~~~~---~~~~~~~-----------~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~I-~~~d~ 288 (641)
.+.|.... .+..+.. ......++++|++..++.+.. .+.+.+.+..++.+ +.+..
T Consensus 237 ~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~ 316 (373)
T 2mad_H 237 LQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred EEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC
Confidence 66663221 1111110 122334678999888887653 24688888877654 55544
Q ss_pred c---eE-EEEEcCc-EEEEEe-CCCCeEEEEeCCcchh
Q psy9327 289 P---IY-ITKIKGN-QVYYLD-RECSPHVLRIDPTEFK 320 (641)
Q Consensus 289 p---~~-~~~~~g~-~v~~~~-~dg~i~v~~~~~~~~~ 320 (641)
+ .. .+..+|+ .++... .++.+.+++..+.+..
T Consensus 317 g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 317 GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 3 12 2445566 777777 5899999988875543
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.10 E-value=3.7e-09 Score=121.42 Aligned_cols=257 Identities=12% Similarity=0.039 Sum_probs=151.8
Q ss_pred cCCCCeEEEEEccCCCeEEEEe-----CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 7 TKSARVKGLSFHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~-----~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
+|...+.+++|||||++||-+. ...+|++||+.+++.+.. ..+.....+++|+ |++.|+.+....
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~-------- 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDK-------- 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSC--------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecC--------
Confidence 4566789999999999988443 235799999999976432 1111113578999 999888876100
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCe----eEEEEcc-CCCCeEEEEEccCCCEEEEEeC----CCeEEEEECCC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----CIFTLLG-HLDYIRTTFFHHEYPWILSASD----DQTIRIWYWQS 152 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~----~~~~~~~-h~~~V~~v~fsp~~~~l~sgs~----Dg~I~vWd~~~ 152 (641)
+. ............|++|++.++. .+..... |...+..+.|+|++++++..+. +..|++||+.+
T Consensus 196 ------~~-~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 196 ------PD-GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ------CC--------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ------cc-cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 00 0000000123469999998764 3333333 4556788999999998754332 35899999987
Q ss_pred Ce-eEEEEccCCCCEEEEEEecCCCEE-EEEeCC---CeEEEEecCCCce--eeeccCCCceeeecccCCCceeeeeeee
Q psy9327 153 RN-CICVLTGHNHYVMCAQFHPTDDIV-VSASLD---QTIRVWDISGLRK--KNVAPGMGKLVLSMKSKHPIWKYCKPVK 225 (641)
Q Consensus 153 ~~-~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~D---gtI~IWD~~~~~~--~~~~~~~~~~v~s~~~~~~v~~~~~~l~ 225 (641)
+. ....+..+.+..... |+++|..+ ++...| +.|..||+.++.. ...+..+...+.++....... +.
T Consensus 269 ~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~l-----v~ 342 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYL-----FA 342 (693)
T ss_dssp TTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEE-----EE
T ss_pred CCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEE-----EE
Confidence 63 455666676666665 56666554 444443 6899999987654 122222222221211111100 11
Q ss_pred eeC--CCeeEEEecCCCcceeeec--CCcceEEEEEcCCccEEEEecC----CeEEEEEcCCCCeEecc
Q psy9327 226 YCN--PKHTLHICNRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSN----HIKYAIVNGDHGIIRTL 286 (641)
Q Consensus 226 s~~--~d~~I~i~d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~----~~k~~l~~~~~g~I~~~ 286 (641)
... ....|.+||..+.....+. ....+..+++++++..++.... -+.++.++.+++..+.+
T Consensus 343 ~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l 411 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLY 411 (693)
T ss_dssp EEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEE
T ss_pred EEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEE
Confidence 111 2236888886655544443 3456777788888766554432 36788888777655443
No 208
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.09 E-value=2.7e-09 Score=106.50 Aligned_cols=159 Identities=6% Similarity=-0.009 Sum_probs=122.9
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..+.+++++|+|.++++...++.|.+||..+.............+.+++++|++.++++..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~------------------- 168 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT------------------- 168 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG-------------------
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC-------------------
Confidence 5789999999999777777789999998654433222223334678999999998777765
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl 169 (641)
.++.|.+||...+........+...+.++++++++.++++...++.|.+||............+...+.++
T Consensus 169 ---------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i 239 (270)
T 1rwi_B 169 ---------DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAV 239 (270)
T ss_dssp ---------GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEE
T ss_pred ---------CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeE
Confidence 67899999988776544333444678999999999888888889999999987665443333344678999
Q ss_pred EEecCCCEEEEEeCCCeEEEEecCCCc
Q psy9327 170 QFHPTDDIVVSASLDQTIRVWDISGLR 196 (641)
Q Consensus 170 ~fsp~g~~lvSgs~DgtI~IWD~~~~~ 196 (641)
+++|+|.++++.+.+++|++++....+
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 999999999999999999999987644
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=1.8e-07 Score=94.25 Aligned_cols=228 Identities=9% Similarity=0.003 Sum_probs=147.4
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
+...+.+++++++|.+.++...++.|..||.. ++. ..+. .....+.++++.+++.+.++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~--------------- 122 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQL--------------- 122 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEET---------------
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEcc---------------
Confidence 34678999999999977777668899999977 544 2232 2346789999999998887775
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEE-EEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEccCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIF-TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLTGHN 163 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~-~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~~h~ 163 (641)
.++.|..||.. ++... .+......+.++++.+++.++++...++.|..||. +++... ....+.
T Consensus 123 -------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 187 (300)
T 2qc5_A 123 -------------NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNA 187 (300)
T ss_dssp -------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred -------------CCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCC
Confidence 67899999987 65442 23334567899999999997777777889999998 554433 223455
Q ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeee-ccCCCceeeecc--cCCCceeeeeeeeeeCCCeeEEEecCCC
Q psy9327 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV-APGMGKLVLSMK--SKHPIWKYCKPVKYCNPKHTLHICNRKM 240 (641)
Q Consensus 164 ~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~-~~~~~~~v~s~~--~~~~v~~~~~~l~s~~~d~~I~i~d~~~ 240 (641)
..+.+++++++|.+.++...++.|.+||. +++.... .+.....+.++. ....+| .+...++.|..+|..+
T Consensus 188 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~------v~~~~~~~i~~~~~~g 260 (300)
T 2qc5_A 188 AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIW------FTEWGANQIGRITNDN 260 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE------EEETTTTEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEE------EeccCCCeEEEECCCC
Confidence 67899999999988887777889999998 3333222 222122222211 111121 1222356677777543
Q ss_pred cceee-ec-CCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 241 EPLCN-IH-ENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 241 ~~~~~-~~-~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
..... .. ....+.+++.+++|...+++. . .+..+
T Consensus 261 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 261 TIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp CEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred cEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 22111 11 234567778888776444433 3 44433
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.07 E-value=6.3e-09 Score=120.37 Aligned_cols=269 Identities=9% Similarity=-0.015 Sum_probs=152.0
Q ss_pred ccCCCeEEEEeCCCc---EEEEECc-----cCcccccc-------cccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 18 HPKRPWILSSLHNGV---IQLWDYR-----MNTLLEKF-------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 18 spdg~~Lasg~~dg~---I~iWD~~-----~~~~l~~~-------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
+|+|++++....++. -.+|-.. .++. ..+ .+|...+.+++|||||++|+.+...
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~---------- 183 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKG-RVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD---------- 183 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCC-EEEECGGGCC----EEEEEEEECTTSSEEEEEEEE----------
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCC-EEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC----------
Confidence 489998887665433 5566543 2322 221 2244478899999999999987610
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCe--------------EEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT--------------IRIW 148 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~--------------I~vW 148 (641)
.++...+|++||+.+++.+... .+...+..++|+|| +.|+.++.|.. |++|
T Consensus 184 -------------~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~ 248 (741)
T 1yr2_A 184 -------------GGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLH 248 (741)
T ss_dssp -------------TTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEE
T ss_pred -------------CCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEE
Confidence 0001146999999999875431 12222357899999 98888876654 9999
Q ss_pred ECCCCe----eEEEEccCCCCEEEEEEecCCCEEEEEeCCC-----eEEEEecCCC--ceeeeccCCCceeeecccCCCc
Q psy9327 149 YWQSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASLDQ-----TIRVWDISGL--RKKNVAPGMGKLVLSMKSKHPI 217 (641)
Q Consensus 149 d~~~~~----~i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg-----tI~IWD~~~~--~~~~~~~~~~~~v~s~~~~~~v 217 (641)
++.++. .+.....|...+.++.|+|||++|+..+.++ .|++||+.++ +....+.......... +
T Consensus 249 ~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-----~ 323 (741)
T 1yr2_A 249 RLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-----V 323 (741)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-----E
T ss_pred ECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-----E
Confidence 997765 3333334445689999999999888777544 8999999876 3122222221111110 0
Q ss_pred eeeeeeeeee----CCCeeEEEecCCC--cceee-ecC-CcceEEEEEcCCccEEEEecCCeE--EEEEcCCCCeEeccc
Q psy9327 218 WKYCKPVKYC----NPKHTLHICNRKM--EPLCN-IHE-NTRVKSGAWDESGVFIYTTSNHIK--YAIVNGDHGIIRTLD 287 (641)
Q Consensus 218 ~~~~~~l~s~----~~d~~I~i~d~~~--~~~~~-~~~-~~~I~sla~~p~g~~L~t~s~~~k--~~l~~~~~g~I~~~d 287 (641)
+.....+... .....|.+||... ..+.. +.+ ...+.+++|+ ++..+++...++. +++++.+.+.++.+.
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 1000001111 1245688888433 22222 222 3346677887 5566777766654 445554455566665
Q ss_pred cc--eEE--E--EEcCcEEE-EEe---CCCCeEEEEeCCcc
Q psy9327 288 LP--IYI--T--KIKGNQVY-YLD---RECSPHVLRIDPTE 318 (641)
Q Consensus 288 ~p--~~~--~--~~~g~~v~-~~~---~dg~i~v~~~~~~~ 318 (641)
.| .++ . ..++..++ +.+ ..+.+..|++.+++
T Consensus 403 ~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 403 LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 43 111 1 12344333 332 23556666665543
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.04 E-value=4.8e-08 Score=99.65 Aligned_cols=225 Identities=8% Similarity=0.087 Sum_probs=142.0
Q ss_pred cCCCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 7 TKSARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 7 ~H~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
.+..--.+..|+|++ .++++...++.|..||..+++. ..+ .....+.+++++|++.++++.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~~---------------- 71 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVATI---------------- 71 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEEE----------------
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEEE----------------
Confidence 344556788999965 4566666789999999887754 333 345789999999999955543
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc----CCCCeEEEEEccCCCEEEEEeCC---------CeEEEEECCC
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----HLDYIRTTFFHHEYPWILSASDD---------QTIRIWYWQS 152 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~D---------g~I~vWd~~~ 152 (641)
++.|.+||.++++....... ....+.+++++|+|.++++...+ ..-.+|.+..
T Consensus 72 --------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 72 --------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp --------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred --------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 45799999998875433322 12357889999999977655322 2334554432
Q ss_pred CeeEEEEccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEec--CCCcee-----eeccCCCceee--ecccCCCceeeee
Q psy9327 153 RNCICVLTGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDI--SGLRKK-----NVAPGMGKLVL--SMKSKHPIWKYCK 222 (641)
Q Consensus 153 ~~~i~~l~~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~--~~~~~~-----~~~~~~~~~v~--s~~~~~~v~~~~~ 222 (641)
......+..+......++|+|+++.+ ++.+.++.|.+||+ .++... ..+........ .+.....+|.
T Consensus 138 ~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv--- 214 (297)
T 3g4e_A 138 DHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV--- 214 (297)
T ss_dssp TSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE---
T ss_pred CCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE---
Confidence 22223333344567899999999866 55566889999997 344321 11111111111 1112222222
Q ss_pred eeeeeCCCeeEEEecCC-CcceeeecCC-cceEEEEEc-CCccEEEEecC
Q psy9327 223 PVKYCNPKHTLHICNRK-MEPLCNIHEN-TRVKSGAWD-ESGVFIYTTSN 269 (641)
Q Consensus 223 ~l~s~~~d~~I~i~d~~-~~~~~~~~~~-~~I~sla~~-p~g~~L~t~s~ 269 (641)
+....+.|..||.. ++.+..+... ..+++++|. |++..|+.++.
T Consensus 215 ---a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 215 ---ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ---EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ---EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 22345678999964 7776666653 689999998 88888877653
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.03 E-value=1.4e-07 Score=99.83 Aligned_cols=238 Identities=8% Similarity=-0.094 Sum_probs=150.8
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++|||||++++++. .++.|.+||..+.+.+..+... ...-..++|+|+|++++++..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~----- 144 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF----- 144 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEec-----
Confidence 899999999998885 3678999999888776665321 123458999999999998861
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCe
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRN 154 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~ 154 (641)
..++.|.++| .+++.+.+ +... + ++.+.|++ ..+++.+.|+++.+||. +++
T Consensus 145 ---------------------~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 145 ---------------------AAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred ---------------------CCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 0257899999 99998877 5422 2 24455655 45677788999999999 777
Q ss_pred eEEEEc-----cCCCC-EEEEEEecCCCEEEEEeCCCeEEEEecCCCce--eeeccC------------CCceeeecccC
Q psy9327 155 CICVLT-----GHNHY-VMCAQFHPTDDIVVSASLDQTIRVWDISGLRK--KNVAPG------------MGKLVLSMKSK 214 (641)
Q Consensus 155 ~i~~l~-----~h~~~-V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~~------------~~~~v~s~~~~ 214 (641)
...... ....+ .....+.+++..++..+.++.+.+.|+.+... ...+.- .+...+.+...
T Consensus 198 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d 277 (373)
T 2mad_H 198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKS 277 (373)
T ss_pred EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCC
Confidence 653321 11122 23345677665555455788999999975432 111110 00000111110
Q ss_pred -CCceeeeeeeee---eCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCeE
Q psy9327 215 -HPIWKYCKPVKY---CNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGII 283 (641)
Q Consensus 215 -~~v~~~~~~l~s---~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~I 283 (641)
..+|-....... -...+.|.+.| .+.+.+..+..+....+++|+|||+ .++++. .++.+.+++..++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 001100000000 00235788889 5566667887777889999999999 788776 578888888776553
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.98 E-value=2.1e-07 Score=96.39 Aligned_cols=217 Identities=7% Similarity=-0.043 Sum_probs=136.7
Q ss_pred CeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
-..+..|+|++. +++++..++.|..||..+++. ..+. ....+.+++|+|++.++++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~-------------------- 107 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS-------------------- 107 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE--------------------
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE--------------------
Confidence 457889999755 556666789999999887653 2332 35689999999999877765
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEcc----CCCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLG----HLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l 159 (641)
.+ .|.+||..+++....... ....+.+++++|+|.++++... .+.|..+| +++.. .+
T Consensus 108 ---------~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~ 174 (326)
T 2ghs_A 108 ---------DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KL 174 (326)
T ss_dssp ---------TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EE
T ss_pred ---------CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-Ee
Confidence 33 399999988875433221 1235889999999997766543 24566666 45533 33
Q ss_pred ccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEecC--CC-ce-----eeeccCCCceeee--cccCCCceeeeeeeeeeC
Q psy9327 160 TGHNHYVMCAQFHPTDDIVV-SASLDQTIRVWDIS--GL-RK-----KNVAPGMGKLVLS--MKSKHPIWKYCKPVKYCN 228 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lv-Sgs~DgtI~IWD~~--~~-~~-----~~~~~~~~~~v~s--~~~~~~v~~~~~~l~s~~ 228 (641)
..+......++|+|+++.++ +.+.++.|.+||+. ++ .. ...+......... ......+|. +..
T Consensus 175 ~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv------a~~ 248 (326)
T 2ghs_A 175 FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN------ARW 248 (326)
T ss_dssp EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE------EEE
T ss_pred eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE------EEe
Confidence 33445678999999998664 44567899999986 44 21 1111111111111 111111221 122
Q ss_pred CCeeEEEecCCCcceeeecC-CcceEEEEEc-CCccEEEEec
Q psy9327 229 PKHTLHICNRKMEPLCNIHE-NTRVKSGAWD-ESGVFIYTTS 268 (641)
Q Consensus 229 ~d~~I~i~d~~~~~~~~~~~-~~~I~sla~~-p~g~~L~t~s 268 (641)
.++.|..||..+..+..+.. ...+.+++|+ +++..|+.++
T Consensus 249 ~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 249 GEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 35678888866655555543 3468899998 8877776654
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=1.4e-07 Score=98.46 Aligned_cols=227 Identities=11% Similarity=0.056 Sum_probs=141.8
Q ss_pred CCeEEEEEccCCCeEEEEe--CCCcEEEEECccCcccccc-------cccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSL--HNGVIQLWDYRMNTLLEKF-------DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~--~dg~I~iWD~~~~~~l~~~-------~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+.+++++|+|+++++.. .++.++||.+.+++. ..| ..|-..+.+++|++++.+.++-.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~---------- 85 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN---------- 85 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC----------
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcC----------
Confidence 6799999999999888864 245466676655543 222 23556899999999987666543
Q ss_pred eeecccCCcceeeEEEeeC----CCeEEEEECCCCeeEEEEccC------CCCeEEEEEccCCC-EEEEEe---CCCeEE
Q psy9327 81 ILESRNEPCLFRIKSVLGD----DYKIKVWNYKQRKCIFTLLGH------LDYIRTTFFHHEYP-WILSAS---DDQTIR 146 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~----Dg~I~vWD~~t~~~~~~~~~h------~~~V~~v~fsp~~~-~l~sgs---~Dg~I~ 146 (641)
+. +..|.+||..+++.+.++... ...+..+++++++. .+++.+ .++.|.
T Consensus 86 -----------------g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 86 -----------------GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp -----------------HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred -----------------CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 11 678999999999977776532 24568999998654 445555 688999
Q ss_pred EEECCCCeeEEEEccCC-----------------------------CCEEEEEEecCCCEEEEEeCCC-eEEEEecC---
Q psy9327 147 IWYWQSRNCICVLTGHN-----------------------------HYVMCAQFHPTDDIVVSASLDQ-TIRVWDIS--- 193 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~-----------------------------~~V~sl~fsp~g~~lvSgs~Dg-tI~IWD~~--- 193 (641)
+||+.+++....+.+|. ..+..++|+|+++.|+.+..++ .+..+|..
T Consensus 149 v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~ 228 (343)
T 2qe8_A 149 RVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLS 228 (343)
T ss_dssp EEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHT
T ss_pred EEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhc
Confidence 99999887766665431 2368899999999888887766 44444432
Q ss_pred CCce-----eeecc--C-CCc-eeeecccCCCceeeeeeeeeeCCCeeEEEecC-CCcceeeecC--CcceEEEEEcCCc
Q psy9327 194 GLRK-----KNVAP--G-MGK-LVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR-KMEPLCNIHE--NTRVKSGAWDESG 261 (641)
Q Consensus 194 ~~~~-----~~~~~--~-~~~-~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~-~~~~~~~~~~--~~~I~sla~~p~g 261 (641)
.+.. ...+. + .+. .-+++.....+ ..+....+.|..||. .+........ .....+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l------~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 229 NLQLTDAELGSKIERYSEKPICDGISIDKDHNI------YVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp CTTCCHHHHHTTCEEEEECCSCSCEEECTTCCE------EEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS
T ss_pred CCCCChhhhhcceEecccCCCCceEEECCCCCE------EEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC
Confidence 1100 00000 0 000 00111111112 223335678899986 5543222222 3457889999888
Q ss_pred cEEEEecCC
Q psy9327 262 VFIYTTSNH 270 (641)
Q Consensus 262 ~~L~t~s~~ 270 (641)
..+++.+..
T Consensus 303 ~l~v~~~~~ 311 (343)
T 2qe8_A 303 YLYFDCNQL 311 (343)
T ss_dssp CEEEEECCG
T ss_pred cEEEEeCcc
Confidence 766665543
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.94 E-value=3.1e-08 Score=100.95 Aligned_cols=156 Identities=10% Similarity=0.073 Sum_probs=117.4
Q ss_pred CCeEEEEEccCCCeEEEEeCC---------------CcEEEEECccCcccccccccccCeEEEEEe----CCCCEEEEec
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---------------GVIQLWDYRMNTLLEKFDEHEGPVRGICFH----NQQPIFVSGG 70 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---------------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fs----p~~~~l~sgs 70 (641)
..+.+++++|+|++.++...+ +.|..||.. ++. ..+..+.....+++|+ |++..+..+.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-EEeccCCCCcceEEEecccCCCCCEEEEEE
Confidence 458899999999877776655 567777654 443 3333445567899999 9997665553
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-CCe-----eEEEEccCC-CCeEEEEEccCCCEEEEEeCCC
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-QRK-----CIFTLLGHL-DYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-t~~-----~~~~~~~h~-~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
+.++.|.+||.. +++ ....+.++. ..+..+++++++.++++...++
T Consensus 195 ---------------------------~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 195 ---------------------------TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp ---------------------------TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ---------------------------CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 267899999986 454 233344444 6788999999999888888899
Q ss_pred eEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCC
Q psy9327 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISG 194 (641)
Q Consensus 144 ~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~ 194 (641)
.|.+||.++++.+..+..+...+.+++|+|++.. +++.+.++.|..||+..
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999877777777777788999999999994 45555678999999864
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.92 E-value=2.8e-10 Score=120.54 Aligned_cols=204 Identities=12% Similarity=0.117 Sum_probs=110.4
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++..+++++.||.|..||..+|+.+.+++. +++.+..+..++..+++++ .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s----------------------------~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDP----------------------------N 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECT----------------------------T
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeC----------------------------C
Confidence 577899999999999999999999888866 5565555666777777766 8
Q ss_pred CCeEEEEECCCCeeEEEEccCCCC-eEE-EEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDY-IRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~-V~~-v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|+.|..||.++|+.+..+..+... +.+ ..+. .+..+++|+.|+.++.||.++++.+..+..+. ...++|++..
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~ 132 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSL 132 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCE
Confidence 999999999999887776544221 100 0111 34567888889999999999999887776553 2356678889
Q ss_pred EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEE-E
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKS-G 255 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~s-l 255 (641)
+++++.|+.|+.||.++++.+-...... ..+....... .....+..++.++.+..|| .+++.+.......++.. .
T Consensus 133 v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~-~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~ 209 (369)
T 2hz6_A 133 LYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDV-DYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFY 209 (369)
T ss_dssp EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCT-TCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEE
T ss_pred EEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCc-cccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEE
Confidence 9999999999999999887654432110 0000000000 0001234456788899999 45665555554444433 3
Q ss_pred EEcCCc
Q psy9327 256 AWDESG 261 (641)
Q Consensus 256 a~~p~g 261 (641)
+++++|
T Consensus 210 ~~~~dg 215 (369)
T 2hz6_A 210 VWQREG 215 (369)
T ss_dssp ECTTSS
T ss_pred EecCCc
Confidence 344444
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.91 E-value=2e-07 Score=99.93 Aligned_cols=273 Identities=11% Similarity=0.035 Sum_probs=167.7
Q ss_pred cCCCeEEEEeC-C----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 19 PKRPWILSSLH-N----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 19 pdg~~Lasg~~-d----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
|++++++++.. + +.|.+.|..+++.+.++..-..+ +++++||+++++++.... ..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~------------------~~ 141 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVF------------------ER 141 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEE------------------EE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccc------------------cc
Confidence 46676665554 2 69999999999999988766667 899999999888875100 00
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEEEECCCCeeEEEEccCCC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRIWYWQSRNCICVLTGHNH 164 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~vWd~~~~~~i~~l~~h~~ 164 (641)
..-+..++.|.++|..+++.+.++.-. ......++|+|++++++.+.. +++|.+.|..+++.+.++.-..
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g- 220 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD- 220 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-
T ss_pred cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-
Confidence 000013678999999999988877521 133467899999999988874 6899999999999888876321
Q ss_pred CEEEEEEecCC-CEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeee------eeeeeeCCCeeEEEec
Q psy9327 165 YVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC------KPVKYCNPKHTLHICN 237 (641)
Q Consensus 165 ~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~------~~l~s~~~d~~I~i~d 237 (641)
+....|++ ..+++.+.||++.+.|..+++...... .+.. ....|++... ..+......+.+.+.|
T Consensus 221 ---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~----~~~~-v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD 292 (426)
T 3c75_H 221 ---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT----EVFH-TEDELLINHPAFSLRSGRLVWPTYTGKIFQAD 292 (426)
T ss_dssp ---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC----CCCS-CTTSCBCSCCEECTTTCEEEEEBTTSEEEEEE
T ss_pred ---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee----eeec-cCCCceeeEeeecCCCCEEEEEeCCCcEEEEe
Confidence 12334443 566677778888877775544332110 0000 0000111000 0011222345677777
Q ss_pred CCCcceeeec-----------C---CcceEEEEEcCCccEEEEecC----------CeEEEEEcCCCCe-EeccccceE-
Q psy9327 238 RKMEPLCNIH-----------E---NTRVKSGAWDESGVFIYTTSN----------HIKYAIVNGDHGI-IRTLDLPIY- 291 (641)
Q Consensus 238 ~~~~~~~~~~-----------~---~~~I~sla~~p~g~~L~t~s~----------~~k~~l~~~~~g~-I~~~d~p~~- 291 (641)
.......... . ......++++|++..++.+.. .+.+.+.+..++. +..+..+-.
T Consensus 293 ~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P 372 (426)
T 3c75_H 293 LTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEI 372 (426)
T ss_dssp ECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred ccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCc
Confidence 4322211110 0 011123689999888887642 3578888877654 455544321
Q ss_pred ---EEEEcCc-EEEEEe-CCCCeEEEEeCCcchh
Q psy9327 292 ---ITKIKGN-QVYYLD-RECSPHVLRIDPTEFK 320 (641)
Q Consensus 292 ---~~~~~g~-~v~~~~-~dg~i~v~~~~~~~~~ 320 (641)
.+..+++ .+++.. .++.+.+++..+.+..
T Consensus 373 ~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 373 DSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 1345677 888888 5899999988875543
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.91 E-value=2.1e-07 Score=98.15 Aligned_cols=245 Identities=9% Similarity=0.055 Sum_probs=155.3
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCcccccccccc-------cCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEHE-------GPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h~-------~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++++|||++++++. .++.|.+||..+++.+.++.... ..-..++|+|||+++.++..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~----- 156 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF----- 156 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-----
Confidence 499999999887765 36789999999998887774321 23457999999999888751
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC-Cee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS-RNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~-~~~ 155 (641)
..++.|.++|..+++.+.++.-. + . ...+......+++.+.||++.+.+..+ ++.
T Consensus 157 ---------------------~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 157 ---------------------SPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp ---------------------SSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred ---------------------CCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 13689999999999999988532 1 1 223333455777888899999999876 554
Q ss_pred EEEEccCC----CCEE-EEEEe-cCCCEEEEEeCCCeEEEEecCCCce--eeecc---------C---CCceeeeccc-C
Q psy9327 156 ICVLTGHN----HYVM-CAQFH-PTDDIVVSASLDQTIRVWDISGLRK--KNVAP---------G---MGKLVLSMKS-K 214 (641)
Q Consensus 156 i~~l~~h~----~~V~-sl~fs-p~g~~lvSgs~DgtI~IWD~~~~~~--~~~~~---------~---~~~~v~s~~~-~ 214 (641)
..+...+. .++. ...|. ++|++++ .+.+|+|.+.|..+... ...+. + .+.....+.. .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 33222121 2221 23554 5675555 66689999999976542 21111 0 0101111111 1
Q ss_pred CCceeeeeeeeee---CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCe-Eeccc
Q psy9327 215 HPIWKYCKPVKYC---NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGI-IRTLD 287 (641)
Q Consensus 215 ~~v~~~~~~l~s~---~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~-I~~~d 287 (641)
+..|-....-.-+ ...+.|.+.| .+.+.+..+.-+.++.+++++++++ .|++++ .++.+.+++..++. ++.++
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 1111100000000 1236788888 6677778887778899999999986 777765 47788888876654 45555
Q ss_pred c
Q psy9327 288 L 288 (641)
Q Consensus 288 ~ 288 (641)
.
T Consensus 372 ~ 372 (386)
T 3sjl_D 372 Q 372 (386)
T ss_dssp C
T ss_pred C
Confidence 5
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.84 E-value=3.3e-07 Score=98.25 Aligned_cols=152 Identities=9% Similarity=0.057 Sum_probs=110.0
Q ss_pred EEEccCCCeEEEEeCCC--cEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 15 LSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
++|+|+++.|+++..++ .|.+||...+.....+ ......+.+++++|++..|..+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d------------------ 237 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD------------------ 237 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC------------------
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE------------------
Confidence 89999999998888766 7888887665443333 22456778999999555555565
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEE----EccCCCCe--EEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEcc
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFT----LLGHLDYI--RTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~----~~~h~~~V--~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~ 161 (641)
.++.|..||..++..... ..++.+.- ..++|+|+ +.++++...++.|+.|+.... +..+.+
T Consensus 238 ----------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g 305 (409)
T 3hrp_A 238 ----------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCG 305 (409)
T ss_dssp ----------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEE
T ss_pred ----------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEe
Confidence 688999999987764322 22222222 39999995 666777778899999997654 334433
Q ss_pred CC---------------CCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCc
Q psy9327 162 HN---------------HYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLR 196 (641)
Q Consensus 162 h~---------------~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~ 196 (641)
+. .....++|+|+|.++++-+ .++.|+.||..++.
T Consensus 306 ~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 306 SATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp CTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred CCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 32 4588999999999888887 89999999987655
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=4.4e-07 Score=97.24 Aligned_cols=240 Identities=8% Similarity=-0.021 Sum_probs=155.0
Q ss_pred EEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCEEEEeceeeEEe
Q psy9327 14 GLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 14 ~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
.++++|||++++++. .++.|.++|..+++.+.++.-. ......++|+||+++++++..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----- 196 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----- 196 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC-----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec-----
Confidence 899999999888775 4678999999999887776421 223467899999999998851
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCee
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
..++.|.+.|..+++.+.++.-- .. ....|++ +.+++.+.||++.+.+..+++.
T Consensus 197 ---------------------~~~~~VsVID~~t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 197 ---------------------SPAPAVGVVDLEGKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp ---------------------SSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred ---------------------CCCCeEEEEECCCCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 02688999999999998887642 11 2333433 5667777788888888765554
Q ss_pred EEE----EccCCCCE-EEEEEecCCCEEEEEeCCCeEEEEecCCCceee--ecc---C---------CCceeeecccC-C
Q psy9327 156 ICV----LTGHNHYV-MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN--VAP---G---------MGKLVLSMKSK-H 215 (641)
Q Consensus 156 i~~----l~~h~~~V-~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~--~~~---~---------~~~~v~s~~~~-~ 215 (641)
... +.....++ ..+.|.+++..++..+.++++.+.|..+..... .+. . .+...+.+... +
T Consensus 252 ~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~ 331 (426)
T 3c75_H 252 KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD 331 (426)
T ss_dssp EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT
T ss_pred EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCC
Confidence 422 11111111 235678998887777888999999997543211 100 0 00000011100 1
Q ss_pred Cceeeeeeeeee---CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCcc-EEEEec-CCeEEEEEcCCCCeE
Q psy9327 216 PIWKYCKPVKYC---NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGV-FIYTTS-NHIKYAIVNGDHGII 283 (641)
Q Consensus 216 ~v~~~~~~l~s~---~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~-~L~t~s-~~~k~~l~~~~~g~I 283 (641)
.+|-....-..+ ...+.|.+.| .+.+.+..+.-+.....++|+|+|+ .++++. .++.+.+++..++.+
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 111100000000 0246799999 6677777887777789999999999 888887 588888888776653
No 221
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.77 E-value=3e-07 Score=93.65 Aligned_cols=147 Identities=8% Similarity=0.068 Sum_probs=108.2
Q ss_pred CCeEEEEEccCCCeEEEEeCC---------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN---------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d---------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
..+++++++|+|++.++...+ +.-.||.+.....+..+..+....++++|+|++..+..+.
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~---------- 167 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYID---------- 167 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEE----------
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEec----------
Confidence 458899999999966654332 3345666543323333334455678999999999776654
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEEC--CCCee-----EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNY--KQRKC-----IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~--~t~~~-----~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
+.++.|.+||+ .++.. ...+..+.+...++++.++|.+.++...++.|.+||..++
T Consensus 168 -----------------~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 168 -----------------SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp -----------------GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred -----------------CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 36889999997 45543 2333445567889999999998888888899999999999
Q ss_pred eeEEEEccCCCCEEEEEEe-cCCCEEEEEeC
Q psy9327 154 NCICVLTGHNHYVMCAQFH-PTDDIVVSASL 183 (641)
Q Consensus 154 ~~i~~l~~h~~~V~sl~fs-p~g~~lvSgs~ 183 (641)
+.+..+..+...+++++|. |+++.|+.++.
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 9998888777889999998 88876655554
No 222
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=98.70 E-value=2.4e-08 Score=92.59 Aligned_cols=73 Identities=23% Similarity=0.364 Sum_probs=61.7
Q ss_pred chHHHHHHHHhcCCccchhhhhhhcCCcHHHHHHHhhcCCCCCCCccCCCCCCCccccCCccccccCCCcccee
Q psy9327 345 EVGERIKILKSCGQTSLAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLT 418 (641)
Q Consensus 345 D~~~r~~~l~~~g~~~la~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (641)
|+++|+++|.++|+++.||++|++||.++.++++.+..+.++++..||.. ..+....||+|+....+|||++.
T Consensus 104 dv~~~i~lL~~~~r~~eA~~~A~t~g~~~~a~~~~~~~~~~~~~~~~p~~-~~~~~~~p~~~~~~~~~nwp~~~ 176 (177)
T 3mkq_B 104 STKERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQAEVDEQDVTLPDQ-MDASNFVQRPVISKPLEKWPLKE 176 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHTTCCGGGCCCCSC-CCCSCCSCCCCCSSCCSSCCBCC
T ss_pred CHHHHHHHHHHCCChHHHHHHHHHcCcHHHHHHHHHHhCCccccccCCCc-CCcccCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999988777778876 33333256666656789999964
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.69 E-value=5.5e-06 Score=86.93 Aligned_cols=265 Identities=8% Similarity=-0.034 Sum_probs=162.8
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc---------ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH---------EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h---------~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
.+..+++++.+|.|..+|..+|+.+.++... ...+.+.-. .++..+++++
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~-------------------- 110 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGS-------------------- 110 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEE--------------------
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEc--------------------
Confidence 3567888888999999999999887766542 122322211 1334555554
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCE----
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV---- 166 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V---- 166 (641)
.++.|..+|.++|+.+..+............. +..++.++.++.+..+|..+++.+..........
T Consensus 111 --------~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 111 --------EKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp --------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred --------CCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 78999999999999888776543222122222 4468888899999999999998877765432211
Q ss_pred -EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCce----eeec--ccCCCceeeeeeeeeeCCCeeEEEecC-
Q psy9327 167 -MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKL----VLSM--KSKHPIWKYCKPVKYCNPKHTLHICNR- 238 (641)
Q Consensus 167 -~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~----v~s~--~~~~~v~~~~~~l~s~~~d~~I~i~d~- 238 (641)
...... +..++.++.++.+..+|..+++..-........ +..+ ....|+.. ...+..+..++.+..+|.
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-NGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-TTEEEEECTTSCEEEEETT
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-CCEEEEEecCcEEEEEECC
Confidence 112222 457888888999999999988776444321100 0000 01112111 112444556778888884
Q ss_pred CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc------eEEEEEcCcEEEEEeCCCCeEEE
Q psy9327 239 KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP------IYITKIKGNQVYYLDRECSPHVL 312 (641)
Q Consensus 239 ~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p------~~~~~~~g~~v~~~~~dg~i~v~ 312 (641)
+++.+..... ....+...+ +..++.++.++.+..++..+|.+. |..+ .......++.++..+.+|.+.++
T Consensus 258 tG~~~w~~~~-~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 258 SGQIMWKREL-GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTL-WTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp TCCEEEEECC-CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEE-EEECTTTTSCCCCCEEETTEEEEECTTSEEEEE
T ss_pred CCcEEeeccC-CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEE-EeecccCCCcccCCEEECCEEEEEeCCCeEEEE
Confidence 4555444433 233444444 456777778888888888887653 2111 11112357889999999999999
Q ss_pred EeCCcchhhh
Q psy9327 313 RIDPTEFKFK 322 (641)
Q Consensus 313 ~~~~~~~~~k 322 (641)
+..+++...+
T Consensus 334 d~~tG~~~~~ 343 (376)
T 3q7m_A 334 NVEDGRFVAQ 343 (376)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCcEEEE
Confidence 8887766543
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.68 E-value=5e-07 Score=103.59 Aligned_cols=208 Identities=13% Similarity=0.101 Sum_probs=124.8
Q ss_pred cccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-EccCCCCeEEEE
Q psy9327 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLGHLDYIRTTF 128 (641)
Q Consensus 50 h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~h~~~V~~v~ 128 (641)
|...+.+++|||||++++-+.+ ..++....|++||+.+|+.+.. +.+ .....++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~-----------------------~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~ 181 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLS-----------------------LAGSDWREIHLMDVESKQPLETPLKD--VKFSGIS 181 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEE-----------------------CSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCE
T ss_pred CcEEEEEEEECCCCCEEEEEEe-----------------------cCCCceEEEEEEECCCCCCCccccCC--ceeccEE
Confidence 5567899999999999886531 0001446899999999986543 221 1124678
Q ss_pred EccCCCEEEEEeCCC-------------eEEEEECCCCe----eEEEEcc-CCCCEEEEEEecCCCEEEEEeC----CCe
Q psy9327 129 FHHEYPWILSASDDQ-------------TIRIWYWQSRN----CICVLTG-HNHYVMCAQFHPTDDIVVSASL----DQT 186 (641)
Q Consensus 129 fsp~~~~l~sgs~Dg-------------~I~vWd~~~~~----~i~~l~~-h~~~V~sl~fsp~g~~lvSgs~----Dgt 186 (641)
|+ |++.|+.++.|. .|++|++.+.. ++..... |.....++.|+|||++|+..+. +..
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 260 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNR 260 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCE
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcE
Confidence 99 999998888774 49999998764 3433344 5566889999999997754332 358
Q ss_pred EEEEecCCCc-eeeeccCCCceeee-cccCCCceeeeeeeeeeC--CCeeEEEecCCC-cc--eee-ecCCcceEEEEEc
Q psy9327 187 IRVWDISGLR-KKNVAPGMGKLVLS-MKSKHPIWKYCKPVKYCN--PKHTLHICNRKM-EP--LCN-IHENTRVKSGAWD 258 (641)
Q Consensus 187 I~IWD~~~~~-~~~~~~~~~~~v~s-~~~~~~v~~~~~~l~s~~--~d~~I~i~d~~~-~~--~~~-~~~~~~I~sla~~ 258 (641)
|++||+.++. ....+......... .......+- +.+.. ....|..+|... .. +.. ..+...+. .|+
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~----~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s 334 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLY----LLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH 334 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEE----EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE
T ss_pred EEEEECCCCCCceEEEeCCCCceEEEEeccCCEEE----EEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE
Confidence 9999997763 22222222111111 000000000 11111 246788887332 22 222 33333443 788
Q ss_pred CCccEEEEecC-C--eEEEEEcCCCCeEeccccc
Q psy9327 259 ESGVFIYTTSN-H--IKYAIVNGDHGIIRTLDLP 289 (641)
Q Consensus 259 p~g~~L~t~s~-~--~k~~l~~~~~g~I~~~d~p 289 (641)
+++.+|+.... + .++.+++.+.+..+.+..|
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKRVREVALP 368 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCEEEEECCS
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCeeEEeecC
Confidence 88887776653 3 3678888777777666543
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.68 E-value=8e-07 Score=91.01 Aligned_cols=206 Identities=11% Similarity=-0.056 Sum_probs=128.8
Q ss_pred eCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
+.++.+..+|.. ++....+..+...+.++...+++. +..++.++.+..+|.. ++....+......+.++.+.+++.+
T Consensus 114 t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l 190 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTI 190 (330)
T ss_dssp CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCE
T ss_pred ecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEE
Confidence 478899999988 877777766666667777777776 5667788999999998 7777676655666777777777775
Q ss_pred EEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCC-cceEEEE
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHEN-TRVKSGA 256 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~-~~I~sla 256 (641)
.+. + +.+..+| .+++...........+.++.... ...+..+..++.+..+|.++..+..+... ..+.++.
T Consensus 191 ~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-----~g~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~ 261 (330)
T 3hxj_A 191 YFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-----DGTIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPV 261 (330)
T ss_dssp EEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-----TSCEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred EEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECC-----CCeEEEEcCCCeEEEECCCCCEeEEeeCCCCccccce
Confidence 544 4 7899999 66555444332222222211110 01133344566677778666655555443 2334456
Q ss_pred EcCCccEEEEecCCeEEEEEcCCCCeEeccccc----eEEEEEcCcEEEEEeCCCCeEEEEeCC
Q psy9327 257 WDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP----IYITKIKGNQVYYLDRECSPHVLRIDP 316 (641)
Q Consensus 257 ~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p----~~~~~~~g~~v~~~~~dg~i~v~~~~~ 316 (641)
.+++| .|+.++.++.+..++.+...+.....+ .....+.+..++.++.+|.+.+.....
T Consensus 262 ~~~~g-~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 262 IGNTD-TIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECTTS-CEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred EcCCC-eEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 66665 477777777777777643333333222 112334667788889999888876554
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.66 E-value=1.5e-06 Score=99.48 Aligned_cols=274 Identities=9% Similarity=-0.013 Sum_probs=169.3
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC----------e-EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------V-RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------V-~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++.+... + .+++. .+..+++++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~------------------- 128 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGV------------------- 128 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC-------------------
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEc-------------------
Confidence 556788888999999999999988887543210 0 11222 234556665
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccC--CCCeEEEEEcc---CCCEEEEEe-----CCCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH--LDYIRTTFFHH---EYPWILSAS-----DDQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h--~~~V~~v~fsp---~~~~l~sgs-----~Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|..+|.++|+.+..+... ......+..+| ++..++..+ .|+.|+.||.++++.+..+
T Consensus 129 ---------~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 129 ---------LDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ---------cCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 8999999999999999887642 11111111122 444444332 3789999999999988776
Q ss_pred ccC--C-----------------------------CCEEEEEEecCCCEEEEEeCCCe-------------------EEE
Q psy9327 160 TGH--N-----------------------------HYVMCAQFHPTDDIVVSASLDQT-------------------IRV 189 (641)
Q Consensus 160 ~~h--~-----------------------------~~V~sl~fsp~g~~lvSgs~Dgt-------------------I~I 189 (641)
... . ..-..+++.|++.+++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 421 0 01125788999999999988864 999
Q ss_pred EecCCCceeeeccCCCceeeecccCC-Cce-eee------eeeeeeCCCeeEEEec-CCCcceeeecCC-----------
Q psy9327 190 WDISGLRKKNVAPGMGKLVLSMKSKH-PIW-KYC------KPVKYCNPKHTLHICN-RKMEPLCNIHEN----------- 249 (641)
Q Consensus 190 WD~~~~~~~~~~~~~~~~v~s~~~~~-~v~-~~~------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~----------- 249 (641)
||..+++.+=.+....+......... ++. ++. ..+..+..++.+.++| .+++.+......
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999987654432111111001111 111 000 0255667889999999 445544221110
Q ss_pred -----------------------------cceEEEEEcCCccEEEEecC-------------------------------
Q psy9327 250 -----------------------------TRVKSGAWDESGVFIYTTSN------------------------------- 269 (641)
Q Consensus 250 -----------------------------~~I~sla~~p~g~~L~t~s~------------------------------- 269 (641)
..-..+++||+...++..++
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 439 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMM 439 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCC
T ss_pred CCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccccc
Confidence 01123688998777776533
Q ss_pred --------------CeEEEEEcCCCCeEecccc----ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 270 --------------HIKYAIVNGDHGIIRTLDL----PI--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 270 --------------~~k~~l~~~~~g~I~~~d~----p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
++.+..|+..+|.+. |.. |. ......+..++.++.||.+++|+..+++..++..+
T Consensus 440 p~~~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 440 PEGAEGLLEMAKSWSGKLIAWDPVKQQAA-WEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp CSSHHHHHHHHTTCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcccccCCCCCCCcceeEEEEECCCCCeE-eEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 266777777776643 211 11 12445788999999999999999999988766544
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=2.3e-06 Score=97.69 Aligned_cols=273 Identities=8% Similarity=-0.040 Sum_probs=172.3
Q ss_pred CCeEEEEeCCCcEEEEECccCccccccccccc-----------CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEG-----------PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~-----------~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++.... ...+++. .+..+++++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~------------------- 135 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGA------------------- 135 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEEC-------------------
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEc-------------------
Confidence 44677778889999999999998887754321 0112232 344556655
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccC-C----CCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-L----DYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICV 158 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~----~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~ 158 (641)
.|+.+..+|..+|+.+.++..+ . ..+.+.-...++ .++.++. ++.|+.+|..+++.+..
T Consensus 136 ---------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 136 ---------WDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ---------CCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 8999999999999999988755 2 112111111134 4444443 79999999999998877
Q ss_pred EccCCCC--------------------------------EEEEEEecCCCEEEEEeCCC-------------------eE
Q psy9327 159 LTGHNHY--------------------------------VMCAQFHPTDDIVVSASLDQ-------------------TI 187 (641)
Q Consensus 159 l~~h~~~--------------------------------V~sl~fsp~g~~lvSgs~Dg-------------------tI 187 (641)
+...... ...++++|++..++.++.++ +|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7532211 13578899999999888764 59
Q ss_pred EEEecCCCceeeeccC--CCceeeecccCCCceeee-------eeeeeeCCCeeEEEec-CCCcceeeecCC--------
Q psy9327 188 RVWDISGLRKKNVAPG--MGKLVLSMKSKHPIWKYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHEN-------- 249 (641)
Q Consensus 188 ~IWD~~~~~~~~~~~~--~~~~v~s~~~~~~v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~-------- 249 (641)
..+|..+++.+=.+.. +...-+. ....|+..-. ..+..+..++.+.++| .+++.+..+...
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~-~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccc-cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 9999999887654432 1111000 0112221110 2255667889999999 455555443311
Q ss_pred ----cce------------------------EEEEEcCCccEEEEecCC-------------------------------
Q psy9327 250 ----TRV------------------------KSGAWDESGVFIYTTSNH------------------------------- 270 (641)
Q Consensus 250 ----~~I------------------------~sla~~p~g~~L~t~s~~------------------------------- 270 (641)
.++ ..+++||++..++...++
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 111 156889988788775432
Q ss_pred ------------eEEEEEcCCCCeEeccccc----e--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHHh
Q psy9327 271 ------------IKYAIVNGDHGIIRTLDLP----I--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALI 326 (641)
Q Consensus 271 ------------~k~~l~~~~~g~I~~~d~p----~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l~ 326 (641)
+.+..|+..+|.+. |..+ . ......+..++..+.||.+++|+..+++..++..+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~-W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAA-WSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccccccCCCCCccEEEEEeCCCCcEE-eecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 66777777777653 2221 1 123456788999999999999999988877665443
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.62 E-value=4.1e-07 Score=94.82 Aligned_cols=163 Identities=10% Similarity=-0.017 Sum_probs=114.0
Q ss_pred cCCCCeEEEEEccCCCeEEEEeC-----CCcEEEEECccCcccccccc------cccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 7 TKSARVKGLSFHPKRPWILSSLH-----NGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 7 ~H~~~V~~l~fspdg~~Lasg~~-----dg~I~iWD~~~~~~l~~~~~------h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
+|-..+.+++|+++|+++++... ++.|.+||..+++.+..+.. +...+..+++++++..+..+.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd----- 138 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD----- 138 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE-----
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc-----
Confidence 45678999999999886665543 57899999998887666542 234568999998655554443
Q ss_pred eeeceeeecccCCcceeeEEEee---CCCeEEEEECCCCeeEEEEccCC-----------------------------CC
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLG---DDYKIKVWNYKQRKCIFTLLGHL-----------------------------DY 123 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s---~Dg~I~vWD~~t~~~~~~~~~h~-----------------------------~~ 123 (641)
+ .++.|.+||..+++....+.+|. ..
T Consensus 139 ----------------------~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 196 (343)
T 2qe8_A 139 ----------------------PAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLG 196 (343)
T ss_dssp ----------------------CCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCC
T ss_pred ----------------------CccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecc
Confidence 2 46789999998887766554431 23
Q ss_pred eEEEEEccCCCEEEEEeCCC-eEEEEECC---CCe-----eE--EEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEec
Q psy9327 124 IRTTFFHHEYPWILSASDDQ-TIRIWYWQ---SRN-----CI--CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs~Dg-~I~vWd~~---~~~-----~i--~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~ 192 (641)
+.+++|+|++..++.+..++ .+..++.. .+. .. ....++......++++++|.++++...++.|.+||.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 68899999999888777665 55444431 110 00 011234445667899999999999999999999998
Q ss_pred CCCc
Q psy9327 193 SGLR 196 (641)
Q Consensus 193 ~~~~ 196 (641)
.+++
T Consensus 277 ~~G~ 280 (343)
T 2qe8_A 277 ADRA 280 (343)
T ss_dssp TTTE
T ss_pred CCCC
Confidence 5444
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.61 E-value=2.9e-06 Score=87.65 Aligned_cols=145 Identities=11% Similarity=0.085 Sum_probs=103.1
Q ss_pred CCeEEEEEccCCCeEEEEeCC----CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHN----GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~d----g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
..+.+++++|+|+++++...+ +...||.+.+++. ..+..+.....+++|+|+++.++.+.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~--------------- 197 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV-TKLFADISIPNSICFSPDGTTGYFVD--------------- 197 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-EEEEEEESSEEEEEECTTSCEEEEEE---------------
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE-EEeeCCCcccCCeEEcCCCCEEEEEE---------------
Confidence 468999999999976655422 2334444434433 33334445678999999998776654
Q ss_pred cCCcceeeEEEeeCCCeEEEEECC--CC-e-----eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYK--QR-K-----CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~--t~-~-----~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~ 157 (641)
+.++.|.+||+. ++ + ....+....+...++++.++|.++++...++.|.+||. +++.+.
T Consensus 198 ------------~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 198 ------------TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp ------------TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred ------------CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 267899999986 56 3 23334444566789999999998888777889999998 567777
Q ss_pred EEccCCCCEEEEEEe-cCCCEEEEEeC
Q psy9327 158 VLTGHNHYVMCAQFH-PTDDIVVSASL 183 (641)
Q Consensus 158 ~l~~h~~~V~sl~fs-p~g~~lvSgs~ 183 (641)
.+..+...+++++|+ |++..|+.++.
T Consensus 265 ~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 265 RYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEECCCCCcEEEEEecCCCCEEEEEec
Confidence 777777789999998 88876655443
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=1.1e-05 Score=84.73 Aligned_cols=252 Identities=5% Similarity=-0.029 Sum_probs=153.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++..++.++.+|.|..+|..+|+.+.++............. +..+++++ .
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~----------------------------~ 151 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHT----------------------------S 151 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEEC----------------------------T
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEc----------------------------C
Confidence 45678888899999999999998877665432221111222 33555555 7
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCe-----EEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC-------EE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYI-----RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY-------VM 167 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V-----~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~-------V~ 167 (641)
++.|..+|..+|+.+..+....... ...... +..++.++.++.+..+|..+++.+......... +.
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 229 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLS 229 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCccccccc
Confidence 9999999999999888776432211 111222 446788888999999999999887666422110 00
Q ss_pred EEEEec--CCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCccee
Q psy9327 168 CAQFHP--TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLC 244 (641)
Q Consensus 168 sl~fsp--~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~ 244 (641)
.+.-.| .+..++.++.++.+..+|..+++..-...... ..++.. ....+..+..++.+..+| .+++...
T Consensus 230 ~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~--~~~~~~------~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 230 DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS--VNDFIV------DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC--EEEEEE------ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred ccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC--CCCceE------ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 011111 35678888889999999999887664443211 111000 001133444677888888 4455444
Q ss_pred eecC--CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe-cccc---ceE-EEEEcCcEEEEEeCCCCeEEEE
Q psy9327 245 NIHE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR-TLDL---PIY-ITKIKGNQVYYLDRECSPHVLR 313 (641)
Q Consensus 245 ~~~~--~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~-~~d~---p~~-~~~~~g~~v~~~~~dg~i~v~~ 313 (641)
.... ...+.+.... +..++.++.++.+..++.++|.+. ..+. ++. .....++.++..+.+|.+.+++
T Consensus 302 ~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 302 TQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred eecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 4431 2222223332 457888888999999998888654 1111 111 1123578889999999988875
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.58 E-value=3.3e-06 Score=83.67 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=114.4
Q ss_pred ceeeccCC--CCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEE
Q psy9327 2 LTKFETKS--ARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 2 l~~~~~H~--~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~ 75 (641)
+.+| .|. ....+|.|+ ++.+..+.+.+| .|+.+|..+++.+.+.... ... .++++. +..+....
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~lt----- 103 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDW--KDKIVGLT----- 103 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEE--TTEEEEEE-----
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEe--CCEEEEEE-----
Confidence 3455 344 335889999 677777777776 8999999999988877543 233 335544 33444333
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
-.++.+.++|..+.+.+.++.....+ .++ .+++..++.+..++.|.++|..+.+.
T Consensus 104 ----------------------w~~~~v~v~D~~t~~~~~ti~~~~eG-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v 158 (262)
T 3nol_A 104 ----------------------WKNGLGFVWNIRNLRQVRSFNYDGEG-WGL--THNDQYLIMSDGTPVLRFLDPESLTP 158 (262)
T ss_dssp ----------------------SSSSEEEEEETTTCCEEEEEECSSCC-CCE--EECSSCEEECCSSSEEEEECTTTCSE
T ss_pred ----------------------eeCCEEEEEECccCcEEEEEECCCCc-eEE--ecCCCEEEEECCCCeEEEEcCCCCeE
Confidence 17899999999999999998753322 233 35666666655688999999999887
Q ss_pred EEEEcc----CC-CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 156 ICVLTG----HN-HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 156 i~~l~~----h~-~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
+.++.- .. ..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 159 ~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 159 VRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred EEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 777642 11 345567776 67666555578899999999988777665
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.57 E-value=6.7e-05 Score=74.65 Aligned_cols=146 Identities=10% Similarity=0.006 Sum_probs=93.4
Q ss_pred CCeEEEEeCCCcEEEEECccCccc-----ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLL-----EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l-----~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
|++|+.+.. +.|+.+|+...... ..+......+.+++|++++..+..+.
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d------------------------- 54 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTD------------------------- 54 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEE-------------------------
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEE-------------------------
Confidence 345555553 47888987654321 11222345678999999776666655
Q ss_pred EeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecC
Q psy9327 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~ 174 (641)
..++.|.++|...+.....+........++++++++. ++++....+.|.+++...................++++|+
T Consensus 55 --~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~ 132 (267)
T 1npe_A 55 --ISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPV 132 (267)
T ss_dssp --TTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETT
T ss_pred --CCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeC
Confidence 2678999999986654444433335778999999755 5555566789999998754332223322356789999997
Q ss_pred CCEEEEEeC---CCeEEEEecCC
Q psy9327 175 DDIVVSASL---DQTIRVWDISG 194 (641)
Q Consensus 175 g~~lvSgs~---DgtI~IWD~~~ 194 (641)
+..|+.+.. .+.|..+++..
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEETTS
T ss_pred CCEEEEEECCCCCcEEEEEecCC
Confidence 665554443 35777777653
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.56 E-value=7.8e-06 Score=81.70 Aligned_cols=160 Identities=4% Similarity=-0.118 Sum_probs=113.6
Q ss_pred CeEEEEEccCCCeEEEEeC--CCcEEEEECccCcccccccccc-cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 11 RVKGLSFHPKRPWILSSLH--NGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~--dg~I~iWD~~~~~~l~~~~~h~-~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
...+++|+|++.+.++.+. ++.|.+.|..+++.+.++.... ....+++++ +..+..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t----------------- 82 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVV----------------- 82 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE-----------------
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEE-----------------
Confidence 4689999998755555543 5799999999999888765322 223456665 34444443
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-----
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH----- 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h----- 162 (641)
-.++.+.++|..+++.+.++..-... ...+++++..++.+..+++|.++|..+.+.+..+.--
T Consensus 83 ----------~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 83 ----------WLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR 150 (266)
T ss_dssp ----------TTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred ----------ecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc
Confidence 27899999999999999988633121 2345567776666667899999999998877776421
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
-..+..+.|. ++...+....++.|.+.|..+++....++
T Consensus 151 ~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 151 VIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp CCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred cccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 1246788888 67555555568899999999988776664
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.55 E-value=1.7e-05 Score=84.56 Aligned_cols=154 Identities=13% Similarity=0.110 Sum_probs=106.8
Q ss_pred cCCCeEEE-EeCCCcEEEEECccC----ccccccc------cc-ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeeccc
Q psy9327 19 PKRPWILS-SLHNGVIQLWDYRMN----TLLEKFD------EH-EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRN 86 (641)
Q Consensus 19 pdg~~Las-g~~dg~I~iWD~~~~----~~l~~~~------~h-~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~ 86 (641)
+++++|+. |..++.|.+.|+.+. +..+.++ .. ...-..+...|+| +++++...
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~-------------- 157 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGN-------------- 157 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEE--------------
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCC--------------
Confidence 78887665 556899999998654 4555552 11 1244667888999 66655400
Q ss_pred CCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC---CeEEEEEccCCCEEEEEe-------------------CCCe
Q psy9327 87 EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD---YIRTTFFHHEYPWILSAS-------------------DDQT 144 (641)
Q Consensus 87 ~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~---~V~~v~fsp~~~~l~sgs-------------------~Dg~ 144 (641)
..+...+.|.+.|.++++.+.++....+ .-..+.|+|+++.++++. .+.+
T Consensus 158 --------~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 158 --------EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp --------TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred --------cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 0001237899999999999999873222 234588899999888885 3789
Q ss_pred EEEEECCCCeeEEEEccC-C-CCEEEEEE--ecCCCEEEEEe------CCCeEEEEecCCC
Q psy9327 145 IRIWYWQSRNCICVLTGH-N-HYVMCAQF--HPTDDIVVSAS------LDQTIRVWDISGL 195 (641)
Q Consensus 145 I~vWd~~~~~~i~~l~~h-~-~~V~sl~f--sp~g~~lvSgs------~DgtI~IWD~~~~ 195 (641)
|.+||+.+++.+.++.-- . .....+.| +|+++++..++ .+++|.+|....+
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 999999999888887642 1 23455656 99999877766 5678888776543
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.53 E-value=5.1e-05 Score=75.51 Aligned_cols=162 Identities=9% Similarity=-0.029 Sum_probs=105.6
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|+|++..|+ +...++.|..+|...+.....+........+++++|++..+..+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d------------------ 97 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD------------------ 97 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEE------------------
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEE------------------
Confidence 3467899999766555 444578999999875543222222234678999999766666554
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC---CCeEEEEECCCCeeEEEEccCCCC
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD---DQTIRIWYWQSRNCICVLTGHNHY 165 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~---Dg~I~vWd~~~~~~i~~l~~h~~~ 165 (641)
...+.|.++|...................++++|++..+..+.. .+.|..+++...............
T Consensus 98 ---------~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~ 168 (267)
T 1npe_A 98 ---------SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGL 168 (267)
T ss_dssp ---------TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSC
T ss_pred ---------CCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCC
Confidence 26789999998754322223323356789999996655544443 468888887643322122233456
Q ss_pred EEEEEEecCCCEE-EEEeCCCeEEEEecCCCcee
Q psy9327 166 VMCAQFHPTDDIV-VSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 166 V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~~~~~ 198 (641)
...++++|++..| ++-...+.|.++|..+....
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 202 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR 202 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE
Confidence 8899999987655 45556789999999865433
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.51 E-value=1.6e-06 Score=91.29 Aligned_cols=198 Identities=5% Similarity=-0.170 Sum_probs=123.1
Q ss_pred eeeccCCCCeEEEEEccCCCeEEEEe----------CCCcEEEEECccCccccccccc-------ccCeEEEEEeCCCCE
Q psy9327 3 TKFETKSARVKGLSFHPKRPWILSSL----------HNGVIQLWDYRMNTLLEKFDEH-------EGPVRGICFHNQQPI 65 (641)
Q Consensus 3 ~~~~~H~~~V~~l~fspdg~~Lasg~----------~dg~I~iWD~~~~~~l~~~~~h-------~~~V~~i~fsp~~~~ 65 (641)
.++..-..+ .+.|+|||++++++. .++.|.+||..+++.+.++... ......++|+|||++
T Consensus 60 ~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~ 137 (368)
T 1mda_H 60 GHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137 (368)
T ss_dssp EEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC
T ss_pred EEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 344434455 799999999888886 3688999999999998888643 123568999999998
Q ss_pred EEEece---eeEEe--eece----eee-c--ccCCcceeeEEEeeCCCeEEEEECCC-----Ce----------------
Q psy9327 66 FVSGGK---MIVMA--YQGC----ILE-S--RNEPCLFRIKSVLGDDYKIKVWNYKQ-----RK---------------- 112 (641)
Q Consensus 66 l~sgs~---~~~~~--~~~~----~~~-~--~~~~~~~~~~~~~s~Dg~I~vWD~~t-----~~---------------- 112 (641)
++++.. ..... ++-. +.. . ...|......++.+.|+++.+.|+.+ ++
T Consensus 138 lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~ 217 (368)
T 1mda_H 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA 217 (368)
T ss_dssp EEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE
T ss_pred EEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc
Confidence 887641 11111 1110 000 0 00111111222233344444444433 11
Q ss_pred ---------------------------eEEEEcc-------C---CCCeEEEEEccCCCEEEEEeC---------CCeEE
Q psy9327 113 ---------------------------CIFTLLG-------H---LDYIRTTFFHHEYPWILSASD---------DQTIR 146 (641)
Q Consensus 113 ---------------------------~~~~~~~-------h---~~~V~~v~fsp~~~~l~sgs~---------Dg~I~ 146 (641)
.+..+.- + ......++|+|++..++.+.. +..+.
T Consensus 218 ~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 218 QANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp EETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred ccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 1111110 0 001112689999887776532 23566
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCC-EEEEEe-CCCeEEEEecCCCceeeeccC
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSAS-LDQTIRVWDISGLRKKNVAPG 203 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~-~lvSgs-~DgtI~IWD~~~~~~~~~~~~ 203 (641)
++|..+++.+.++.... ....+.|+|+|+ .+++.. .+++|.++|..+++.+.+++.
T Consensus 298 ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 298 SVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 99999999888775332 578999999997 566777 599999999999998888763
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.48 E-value=5e-06 Score=85.00 Aligned_cols=167 Identities=11% Similarity=0.019 Sum_probs=105.6
Q ss_pred eeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 97 LGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
++.++.|..+|.. ++.+..+......+.++.+.+++.+++. + +.+..+| .+++...........+.++...++|.
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC
T ss_pred EcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe
Confidence 3478999999998 8877777766667777888778875544 4 8899999 77777777766666788888888775
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecC-CcceEEE
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHE-NTRVKSG 255 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~-~~~I~sl 255 (641)
+..++.++.+..+|.. ++............. .++......+..+..++.+..+|.++........ ...+.++
T Consensus 228 -l~v~t~~~gl~~~~~~-g~~~~~~~~~~~~~~-----~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 228 -IYVTSLDGHLYAINPD-GTEKWRFKTGKRIES-----SPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATP 300 (330)
T ss_dssp -EEEEETTTEEEEECTT-SCEEEEEECSSCCCS-----CCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCC
T ss_pred -EEEEcCCCeEEEECCC-CCEeEEeeCCCCccc-----cceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccce
Confidence 4456677888888853 333333322111111 1111111124455567778888866555544443 4456667
Q ss_pred EEcCCccEEEEecCCeEEEEE
Q psy9327 256 AWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 256 a~~p~g~~L~t~s~~~k~~l~ 276 (641)
..+++|. |+.++.+|.+.+.
T Consensus 301 ~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 301 VIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp EECTTCC-EEEECTTSCEEEE
T ss_pred EEcCCCE-EEEEcCCCeEEEE
Confidence 7777765 5556655555544
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.47 E-value=7.4e-06 Score=81.18 Aligned_cols=157 Identities=10% Similarity=-0.002 Sum_probs=112.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCe--EEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV--RGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V--~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....+|.|+. +.+..+.+.+|.|+.+|..+++.+.+. -.... .++++..+. ..+...
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~-Ly~ltw----------------- 113 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGER-LYQLTW----------------- 113 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSC-EEEEES-----------------
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCE-EEEEEc-----------------
Confidence 3457899984 567778888899999999999988877 22333 346655433 223333
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--CC--
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG--HN-- 163 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~--h~-- 163 (641)
.++.+.+||.++.+.+.++..-..+ .+++ +++..|+.+..++.|.++|..+.+.+.++.- +.
T Consensus 114 -----------~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 114 -----------TEGLLFTWSGMPPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp -----------SSCEEEEEETTTTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred -----------cCCEEEEEECCcCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 7899999999999999998753222 3444 5677777776799999999999888777642 21
Q ss_pred -CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 164 -HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 164 -~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 245667777 67655555568899999999988776664
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.47 E-value=8.9e-05 Score=76.03 Aligned_cols=153 Identities=11% Similarity=0.147 Sum_probs=103.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc--------------------ccccCeEEEEEeC-CCCEEEE
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD--------------------EHEGPVRGICFHN-QQPIFVS 68 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~--------------------~h~~~V~~i~fsp-~~~~l~s 68 (641)
....+++|+++|+++.++..++.|..||..+++. ..+. .....+.++++.+ ++.++++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 4567889999999888888899999999765532 2221 1124678999998 6655444
Q ss_pred eceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-----CCCCeEEEEEcc-CCCEEEEEeC-
Q psy9327 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-----HLDYIRTTFFHH-EYPWILSASD- 141 (641)
Q Consensus 69 gs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-----h~~~V~~v~fsp-~~~~l~sgs~- 141 (641)
. ..+.|..+|..++.. ..+.. .......+++.+ +|.+.++...
T Consensus 98 d-----------------------------~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 98 D-----------------------------CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVST 147 (322)
T ss_dssp E-----------------------------TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCS
T ss_pred E-----------------------------CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcc
Confidence 3 344588888776542 22211 123578899999 9987776532
Q ss_pred ----------------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 142 ----------------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 142 ----------------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
++.|..||..+++...... .......++|+|++..++.+ +.++.|.+||+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3779999987776432222 22345678999999865554 5678999999875
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.45 E-value=3.3e-08 Score=104.45 Aligned_cols=173 Identities=13% Similarity=0.033 Sum_probs=96.3
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCC-EE-EEEEecCCC
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY-VM-CAQFHPTDD 176 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~-V~-sl~fsp~g~ 176 (641)
.|+.|..||..+|+.+.++.. +.+.+..+..++..+++++.|+.|+.||.++++.+..+..+... +. +..+. .+.
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~ 93 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG 93 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----
T ss_pred CCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC
Confidence 899999999999999998876 55656666677878888899999999999998876665433211 10 00111 355
Q ss_pred EEEEEeCCCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEec-CCCcceeeecCCcceEEE
Q psy9327 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN-RKMEPLCNIHENTRVKSG 255 (641)
Q Consensus 177 ~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sl 255 (641)
.+++++.|+.++.||..+++.+-.+...+... ..| ....+..++.++.+..|| .+++.+..+... ...+.
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~-----~~p---~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~~~~~ 164 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEKQQTLSSAFADS-----LSP---STSLLYLGRTEYTITMYDTKTRELRWNATYF-DYAAS 164 (369)
T ss_dssp -CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE-EECCB
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEecCCCccc-----ccc---cCCEEEEEecCCEEEEEECCCCCEEEeEecc-cccCc
Confidence 78888999999999999988776554332111 111 111245566788999999 455554443321 12223
Q ss_pred EEcCCc---cEEEEecCCeEEEEEcCCCCeE
Q psy9327 256 AWDESG---VFIYTTSNHIKYAIVNGDHGII 283 (641)
Q Consensus 256 a~~p~g---~~L~t~s~~~k~~l~~~~~g~I 283 (641)
++++++ ..++.++.++.+..++..+|.+
T Consensus 165 ~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 165 LPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 344432 4577788889999999888765
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.39 E-value=3.5e-05 Score=75.64 Aligned_cols=166 Identities=9% Similarity=0.005 Sum_probs=113.0
Q ss_pred ceeeccCC--CCeEEEEEccCCCeEEEEeCCC--cEEEEECccCcccccccccccC-eEEEEEeCCCCEEEEeceeeEEe
Q psy9327 2 LTKFETKS--ARVKGLSFHPKRPWILSSLHNG--VIQLWDYRMNTLLEKFDEHEGP-VRGICFHNQQPIFVSGGKMIVMA 76 (641)
Q Consensus 2 l~~~~~H~--~~V~~l~fspdg~~Lasg~~dg--~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp~~~~l~sgs~~~~~~ 76 (641)
+.+| .|. ....+|.|++ +.+..+.+.+| .|+.+|..+++.+.+..-.... -.++++.. ..+....
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--~~ly~lt------ 81 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--DRLIQLT------ 81 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEE------
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--CEEEEEE------
Confidence 4455 454 4577999997 55666666654 8999999999988877533221 13445543 3333332
Q ss_pred eeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeE
Q psy9327 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156 (641)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i 156 (641)
-.++.+.++|.++.+.+.++.....+ .+++ +++..|+.+..+++|.++|..+.+.+
T Consensus 82 ---------------------w~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 82 ---------------------WRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp ---------------------SSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEE
T ss_pred ---------------------eeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEE
Confidence 17899999999999999998753333 3444 45665555556899999999998877
Q ss_pred EEEccCC-----CCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 157 CVLTGHN-----HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 157 ~~l~~h~-----~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.++.-.. ..++.+.|. +|...+..-.+..|.+.|..+++....+.
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 7764211 345566665 56655555567899999999988777664
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.38 E-value=7.8e-06 Score=83.35 Aligned_cols=176 Identities=10% Similarity=-0.003 Sum_probs=109.8
Q ss_pred eeccCCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc-----ccCeEEEEEeCCCCEEEE----eceeeE
Q psy9327 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-----EGPVRGICFHNQQPIFVS----GGKMIV 74 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-----~~~V~~i~fsp~~~~l~s----gs~~~~ 74 (641)
.+..+...+.+++++++|+++++...++.|..||.. ++. ..+..+ ...+..++++|+|.+.++ |...
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~-- 155 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK-- 155 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSC--
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccc--
Confidence 455567789999999999966666566889999975 543 222111 234678999999998886 3200
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCC------CeEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDD------QTIRIW 148 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vW 148 (641)
.+.+. ........+.|..||..+++..... .......++|+|++..++.+..+ +.|.+|
T Consensus 156 -~~~~~------------~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 156 -PSQGC------------PADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp -GGGSC------------CCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred -ccccc------------ccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 00000 0000001356888888777654433 44567889999999977766554 789999
Q ss_pred ECCCCee--EEEE-ccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 149 YWQSRNC--ICVL-TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 149 d~~~~~~--i~~l-~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
|+..... ...+ .........+++.++|++.++ +.+ .|.+||.. ++....+
T Consensus 221 ~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~ 273 (305)
T 3dr2_A 221 AWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHI 273 (305)
T ss_dssp EEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEE
T ss_pred EecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEE
Confidence 9876541 1111 112344567889999995544 444 59999985 4444333
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.37 E-value=1.1e-05 Score=84.96 Aligned_cols=101 Identities=5% Similarity=-0.277 Sum_probs=75.9
Q ss_pred cEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC
Q psy9327 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR 111 (641)
Q Consensus 32 ~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~ 111 (641)
+|.+.|..+++.+.++..-..+ ++.|+|+++.+.++..... ...-+..++.|.+||..++
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~------------------r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFA------------------RSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEET------------------TTTSSSEEEEEEEECTTTC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEccccc------------------ccccCCCCCEEEEEECCCC
Confidence 8889999999999998766667 7999999998888740000 0000003689999999999
Q ss_pred eeEEEEccC-------CCCeEEEEEccCCCEEEEEeC--CCeEEE--EECCC
Q psy9327 112 KCIFTLLGH-------LDYIRTTFFHHEYPWILSASD--DQTIRI--WYWQS 152 (641)
Q Consensus 112 ~~~~~~~~h-------~~~V~~v~fsp~~~~l~sgs~--Dg~I~v--Wd~~~ 152 (641)
+.+.++..+ ......++|+|+|++++.+.. +..|.+ +|..+
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 999998643 123567999999999888864 467888 99876
No 244
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.35 E-value=1.5e-05 Score=91.09 Aligned_cols=242 Identities=10% Similarity=0.053 Sum_probs=148.3
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc--ccCeEEEEEeC---CCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH--EGPVRGICFHN---QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h--~~~V~~i~fsp---~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.+..+++++.||.|..+|..+|+.+.++... ......+..+| ++ .++++... ..
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~---------------~~----- 178 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGG---------------AE----- 178 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBC---------------TT-----
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCC---------------Cc-----
Confidence 3557888999999999999999988776542 11111111112 33 33333200 00
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccC--C-----------------------------CCeEEEEEccCCCEEEEEeCCC
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGH--L-----------------------------DYIRTTFFHHEYPWILSASDDQ 143 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h--~-----------------------------~~V~~v~fsp~~~~l~sgs~Dg 143 (641)
.+.++.|..||.++|+.+..+... . .....++++|+...++.++.++
T Consensus 179 --~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g 256 (689)
T 1yiq_A 179 --FGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNG 256 (689)
T ss_dssp --TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCE
T ss_pred --cCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCC
Confidence 013789999999999998887521 0 0012578889888899888876
Q ss_pred e-------------------EEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCCC---EEEEEeCCCeEEEEec
Q psy9327 144 T-------------------IRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTDD---IVVSASLDQTIRVWDI 192 (641)
Q Consensus 144 ~-------------------I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g~---~lvSgs~DgtI~IWD~ 192 (641)
. |..||.++++.+..+.. |. ..........+|. .++.++.+|.++++|.
T Consensus 257 ~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~ 336 (689)
T 1yiq_A 257 SLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDR 336 (689)
T ss_dssp ESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred CccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEEC
Confidence 4 99999999998877753 32 1222233334564 7889999999999999
Q ss_pred CCCceeeeccCC------------Ccee----------------ee-------------cccCCC-ceeeeee-------
Q psy9327 193 SGLRKKNVAPGM------------GKLV----------------LS-------------MKSKHP-IWKYCKP------- 223 (641)
Q Consensus 193 ~~~~~~~~~~~~------------~~~v----------------~s-------------~~~~~~-v~~~~~~------- 223 (641)
.+++.+...+-. +..+ .+ ...... ++.....
T Consensus 337 ~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 416 (689)
T 1yiq_A 337 ATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEH 416 (689)
T ss_dssp TTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEEC
T ss_pred CCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeee
Confidence 999876321100 0000 00 000000 0000000
Q ss_pred e-------------eee------------------CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCe
Q psy9327 224 V-------------KYC------------------NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 224 l-------------~s~------------------~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
. ..+ ..++.+..|| .+++.+..+....+.....+...+..++.++.++
T Consensus 417 ~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg 496 (689)
T 1yiq_A 417 IPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADG 496 (689)
T ss_dssp CSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTS
T ss_pred ccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCC
Confidence 0 000 0147899999 5566666666655565566666777888999999
Q ss_pred EEEEEcCCCCeEe
Q psy9327 272 KYAIVNGDHGIIR 284 (641)
Q Consensus 272 k~~l~~~~~g~I~ 284 (641)
.+..++.++|.+.
T Consensus 497 ~l~a~D~~tG~~l 509 (689)
T 1yiq_A 497 RVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEETTTCCEE
T ss_pred cEEEEECCCCccc
Confidence 9999998888653
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.34 E-value=1.6e-05 Score=90.83 Aligned_cols=241 Identities=9% Similarity=0.049 Sum_probs=150.9
Q ss_pred CCCeEEEEeCCCcEEEEECccCccccccccc-c----cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-E----GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~----~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
++..+++++.|+.+..+|..+|+.+.++..+ . ..+.+--.. .+..+++++.. ..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~---------------~~----- 185 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGG---------------AE----- 185 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBC---------------TT-----
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecc---------------cc-----
Confidence 3567888899999999999999998877654 1 111110000 12334444300 00
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccCCCC--------------------------------eEEEEEccCCCEEEEEeCC
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGHLDY--------------------------------IRTTFFHHEYPWILSASDD 142 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~--------------------------------V~~v~fsp~~~~l~sgs~D 142 (641)
.+.++.|..||..+|+.+.++...... ...++++|++..++.++.+
T Consensus 186 --~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~ 263 (677)
T 1kb0_A 186 --YGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGN 263 (677)
T ss_dssp --TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCC
T ss_pred --cCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCC
Confidence 002789999999999999887643211 1247889988888888766
Q ss_pred C-------------------eEEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCC---CEEEEEeCCCeEEEEe
Q psy9327 143 Q-------------------TIRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTD---DIVVSASLDQTIRVWD 191 (641)
Q Consensus 143 g-------------------~I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g---~~lvSgs~DgtI~IWD 191 (641)
+ +|..+|.++++.+..+.. |. .....+....+| ..++.++.+|.++++|
T Consensus 264 ~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD 343 (677)
T 1kb0_A 264 GSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLD 343 (677)
T ss_dssp EESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred CccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEE
Confidence 4 599999999998877653 31 123333444577 6899999999999999
Q ss_pred cCCCceeeeccCC-----------Cceee--------------------------ecccCCC-ceeeeee----ee----
Q psy9327 192 ISGLRKKNVAPGM-----------GKLVL--------------------------SMKSKHP-IWKYCKP----VK---- 225 (641)
Q Consensus 192 ~~~~~~~~~~~~~-----------~~~v~--------------------------s~~~~~~-v~~~~~~----l~---- 225 (641)
..+++.+...+-. +..+. +...... ++..... +.
T Consensus 344 ~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 423 (677)
T 1kb0_A 344 RTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKK 423 (677)
T ss_dssp TTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTT
T ss_pred CCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccc
Confidence 9999876543210 11110 0000000 0000000 00
Q ss_pred --ee--------------------------CCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEE
Q psy9327 226 --YC--------------------------NPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIV 276 (641)
Q Consensus 226 --s~--------------------------~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~ 276 (641)
.+ ...+.|..|| .+++.+..+....++.+..+...+..++.++.++.+.++
T Consensus 424 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~ 503 (677)
T 1kb0_A 424 WEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAY 503 (677)
T ss_dssp CCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEE
Confidence 00 0237899999 556666666666666666677777788888999999999
Q ss_pred cCCCCeE
Q psy9327 277 NGDHGII 283 (641)
Q Consensus 277 ~~~~g~I 283 (641)
+..+|.+
T Consensus 504 D~~tG~~ 510 (677)
T 1kb0_A 504 HAATGEK 510 (677)
T ss_dssp ETTTCCE
T ss_pred ECCCCce
Confidence 9887764
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.21 E-value=4.9e-05 Score=80.98 Aligned_cols=174 Identities=18% Similarity=0.199 Sum_probs=114.4
Q ss_pred CeEEEEEccCCCeEEEEeCC------CcEEEEECccCcccccccccccC---eEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 11 RVKGLSFHPKRPWILSSLHN------GVIQLWDYRMNTLLEKFDEHEGP---VRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~d------g~I~iWD~~~~~~l~~~~~h~~~---V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.-..+..+|+| +++++..+ |.|.+.|..+++.+.++..-.++ -..+.|+|+++.++++. |+.....
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~----wg~p~~~ 213 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE----WAVPNTI 213 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB----CCCHHHH
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEcc----CcCcccc
Confidence 34567788999 77777666 78999999999988888633222 34588899999998884 0000000
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-C-CCeEEEEE--ccCCCEEEEEe------CCCeEEEEECC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-L-DYIRTTFF--HHEYPWILSAS------DDQTIRIWYWQ 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~-~~V~~v~f--sp~~~~l~sgs------~Dg~I~vWd~~ 151 (641)
..+. .+. ... . ..+.+|.+||+.+++.+.++..- . ...+.+.| +|+++++..++ .+++|.+|.+.
T Consensus 214 ~~g~-~~~--~~~-~-~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 214 EDGL-KLE--HLK-D-RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp TTCC-CTT--THH-H-HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cccc-chh--hhh-h-ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 0000 000 000 0 14789999999999988888653 1 34556666 99999877666 57799888776
Q ss_pred CCee--EEEE--ccC----------------CCCEEEEEEecCCCEEEEEeC-CCeEEEEecCC
Q psy9327 152 SRNC--ICVL--TGH----------------NHYVMCAQFHPTDDIVVSASL-DQTIRVWDISG 194 (641)
Q Consensus 152 ~~~~--i~~l--~~h----------------~~~V~sl~fsp~g~~lvSgs~-DgtI~IWD~~~ 194 (641)
.++. ...+ ... ......+.+||||++|.++.. .+.|.++|+..
T Consensus 289 ~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 289 DGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred CCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 5431 1111 110 234678999999998876665 78999999863
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.21 E-value=0.00012 Score=83.27 Aligned_cols=273 Identities=10% Similarity=-0.010 Sum_probs=164.7
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC----------e-EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP----------V-RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~----------V-~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+++++.++.|..+|..+|+.+.+++..... + .+++. .+..++.++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~------------------- 124 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGT------------------- 124 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEEC-------------------
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEc-------------------
Confidence 456778888999999999999988877543211 0 11222 233455554
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~l 159 (641)
.|+.|..+|.++|+.+.++..... .+.+.-.-.++ .++.++. ++.|..+|.++++.+..+
T Consensus 125 ---------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 125 ---------LDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp ---------TTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ---------CCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 799999999999999988764211 11110000134 4444433 589999999999988777
Q ss_pred ccC---CC----------------------------CEEEEEEecCCCEEEEEeCCCe-------------------EEE
Q psy9327 160 TGH---NH----------------------------YVMCAQFHPTDDIVVSASLDQT-------------------IRV 189 (641)
Q Consensus 160 ~~h---~~----------------------------~V~sl~fsp~g~~lvSgs~Dgt-------------------I~I 189 (641)
... .. ....+++.|+...++.++.++. |..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 521 00 1124688888889988887764 999
Q ss_pred EecCCCceeeeccCCCceeeecccCCC-ce-ee--e----eeeeeeCCCeeEEEec-CCCcceeeecC------------
Q psy9327 190 WDISGLRKKNVAPGMGKLVLSMKSKHP-IW-KY--C----KPVKYCNPKHTLHICN-RKMEPLCNIHE------------ 248 (641)
Q Consensus 190 WD~~~~~~~~~~~~~~~~v~s~~~~~~-v~-~~--~----~~l~s~~~d~~I~i~d-~~~~~~~~~~~------------ 248 (641)
+|..+++.+=......+.........| +. .+ . ..+..+..++.+.++| .+++.+.....
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 999998876544321111100011111 10 00 0 0155666888899998 44554422111
Q ss_pred -Ccce------------------------EEEEEcCCccEEEEec-----------------------------------
Q psy9327 249 -NTRV------------------------KSGAWDESGVFIYTTS----------------------------------- 268 (641)
Q Consensus 249 -~~~I------------------------~sla~~p~g~~L~t~s----------------------------------- 268 (641)
..++ ..+++||+...++...
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 0011 1267888766655421
Q ss_pred -CCeEEEEEcCCCCeEecccc----ce--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 269 -NHIKYAIVNGDHGIIRTLDL----PI--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 269 -~~~k~~l~~~~~g~I~~~d~----p~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
.++.+..|+..+|.+. |.. +. ......++.++.++.|+.+++|+..+++..++..+
T Consensus 435 ~~~g~l~A~D~~tG~~~-W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAA-WKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp GCEEEEEEEETTTTEEE-EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CccceEEEEeCCCCcEE-EEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 2367777887777653 211 11 12445788999999999999999998887765544
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.16 E-value=0.0028 Score=73.42 Aligned_cols=267 Identities=10% Similarity=0.099 Sum_probs=160.3
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCL 90 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~ 90 (641)
|.++...+++.+.+ |+.++.+..||..+++..... ..+...|.++...+++.+.+..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt--------------------- 232 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT--------------------- 232 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE---------------------
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE---------------------
Confidence 88888888886444 665545888997766543221 1235678888888877755544
Q ss_pred eeeEEEeeCCCeEEEEECCCCeeEEEEcc-------CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc--
Q psy9327 91 FRIKSVLGDDYKIKVWNYKQRKCIFTLLG-------HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG-- 161 (641)
Q Consensus 91 ~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-------h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~-- 161 (641)
.++-+..||..+++....... ....|.++...+++.+.+ |+.+ -|.+||..+++.......
T Consensus 233 --------~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~ 302 (795)
T 4a2l_A 233 --------EGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPV 302 (795)
T ss_dssp --------BSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTT
T ss_pred --------CCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCC
Confidence 344488999887765433221 135799999998887554 4444 689999887764433211
Q ss_pred -----CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccC------CCceeeecccCCCceeeeeeeeeeCCC
Q psy9327 162 -----HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG------MGKLVLSMKSKHPIWKYCKPVKYCNPK 230 (641)
Q Consensus 162 -----h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~------~~~~v~s~~~~~~v~~~~~~l~s~~~d 230 (641)
....|.++...++|.+ ..|+.++-|..||..+......... .+..|.++..... ..+..|..+
T Consensus 303 ~~~~l~~~~i~~i~~D~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-----g~lWiGt~~ 376 (795)
T 4a2l_A 303 ENGSLSQRSVRSIFMDSQGGM-WLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-----KNLWIGTND 376 (795)
T ss_dssp STTSCSSSCEEEEEECTTSCE-EEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-----SCEEEEESS
T ss_pred CCCCCCCCcEEEEEEeCCcCE-EEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-----CCEEEEECC
Confidence 2356999999888874 4577778899998765443221110 1122333221110 113344456
Q ss_pred eeEEEecCCCcceeeec----------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc--------ceE-
Q psy9327 231 HTLHICNRKMEPLCNIH----------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL--------PIY- 291 (641)
Q Consensus 231 ~~I~i~d~~~~~~~~~~----------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~--------p~~- 291 (641)
+-+..+|.....+..+. ....|.+++.+++|..|+.|+.++-+..++.+++.+..+.. .+.
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 67788885544443332 13568899999998867777765557777777776654421 122
Q ss_pred EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 292 ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 292 ~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
+..+....++.++.+ .+..++.++.
T Consensus 457 i~~d~~g~lwigt~~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 457 ILPDGEGNLWLGTLS-ALVRFNPEQR 481 (795)
T ss_dssp EEECSSSCEEEEESS-CEEEEETTTT
T ss_pred EEECCCCCEEEEecC-ceeEEeCCCC
Confidence 233445566666663 3555555443
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.15 E-value=0.00041 Score=68.73 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=107.5
Q ss_pred eeccCCCCeEEEEEccCCCeE-EEEeCCCcEEEEECccCcccccccc-cccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 4 KFETKSARVKGLSFHPKRPWI-LSSLHNGVIQLWDYRMNTLLEKFDE-HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 4 ~~~~H~~~V~~l~fspdg~~L-asg~~dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.+-.+.+.+++|+|++..| ++...++.|...|.. ++.+.++.- -.....+|++.+++.++++.-
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E----------- 88 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE----------- 88 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET-----------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC-----------
Confidence 344556789999999987655 457778999999987 877777632 225678899999888767654
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECCCCee---EEEEc------cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC-
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC---IFTLL------GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ- 151 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~---~~~~~------~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~- 151 (641)
.++.+.++++..... +.... ......-+++|+|.+..|.++.......+|.++
T Consensus 89 -----------------~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g 151 (255)
T 3qqz_A 89 -----------------RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG 151 (255)
T ss_dssp -----------------TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred -----------------CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc
Confidence 667788887654432 22221 134457899999998777766665544555443
Q ss_pred --CCeeEEEEc-------cCCCCEEEEEEecCC-CEEEEEeCCCeEEEEecCC
Q psy9327 152 --SRNCICVLT-------GHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 152 --~~~~i~~l~-------~h~~~V~sl~fsp~g-~~lvSgs~DgtI~IWD~~~ 194 (641)
....+..+. .+...+.+++++|.. .+++....++.+.++|.+.
T Consensus 152 ~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 152 LLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp TTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred cccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 111122221 133457899999964 5566666677888888765
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.13 E-value=0.0013 Score=66.90 Aligned_cols=223 Identities=10% Similarity=0.034 Sum_probs=128.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
....+++|+++|+++++...++.|..||...+ ....+ ...+...++++.+++.++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~------------------- 90 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGW------------------- 90 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEE-------------------
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEec-------------------
Confidence 56789999999997777768899999997643 33322 2335688999999999666553
Q ss_pred ceeeEEEeeCC-CeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee-EEEEc------
Q psy9327 90 LFRIKSVLGDD-YKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC-ICVLT------ 160 (641)
Q Consensus 90 ~~~~~~~~s~D-g~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~-i~~l~------ 160 (641)
..+ ..|..+|..+++...... ........++..+++..+++...++.|.++|..+++. +....
T Consensus 91 --------~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 91 --------NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp --------CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred --------cCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence 122 357777877776543222 1223345566656555555555688999999876532 22111
Q ss_pred ---cCCCCEEEEEEecCCCEE-EEEeCCCeEEEEecCC-Cce--eeeccCC-CceeeecccCCCceeeeeeeeeeCCCee
Q psy9327 161 ---GHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG-LRK--KNVAPGM-GKLVLSMKSKHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 161 ---~h~~~V~sl~fsp~g~~l-vSgs~DgtI~IWD~~~-~~~--~~~~~~~-~~~v~s~~~~~~v~~~~~~l~s~~~d~~ 232 (641)
+.......+ +|++..+ ++-+..++|..+|+.. ++. ...+... ...-+++.....+| .+....+.
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~------va~~~~~~ 234 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY------GATHIYNS 234 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE------EECBTTCC
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEE------EEeCCCCe
Confidence 112234555 8888655 4555678999999875 221 1111000 00000111111111 12224567
Q ss_pred EEEecCCCcc--eeeecC-CcceEEEEEc---CCccEEEEecC
Q psy9327 233 LHICNRKMEP--LCNIHE-NTRVKSGAWD---ESGVFIYTTSN 269 (641)
Q Consensus 233 I~i~d~~~~~--~~~~~~-~~~I~sla~~---p~g~~L~t~s~ 269 (641)
|..+|..+.. +..+.. .....+++|. |++..|+.++.
T Consensus 235 V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 235 VVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 8888865543 222333 2567889998 78777776654
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.12 E-value=0.0013 Score=76.39 Aligned_cols=267 Identities=9% Similarity=0.088 Sum_probs=156.1
Q ss_pred eEEEEEccCCCeEEEEeCCCcEEEEECccCccccccccc-ccC-eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH-EGP-VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 12 V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~-V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
|.++...++|.+.+ ++. +.+..||..+++.......+ ... |.++...+++.+.+..
T Consensus 133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-------------------- 190 (795)
T 4a2l_A 133 VNGIEEISPEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGT-------------------- 190 (795)
T ss_dssp CCEEEEEETTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEE--------------------
T ss_pred EEEEEECCCCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEE--------------------
Confidence 88888888887554 444 44889997765432211111 223 8889888888665543
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEcc-------
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG------- 161 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~------- 161 (641)
.++.+..||..+++..... ..+...|.++...+++.+.+ |+.++.+..||..+++.......
T Consensus 191 ---------~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l 260 (795)
T 4a2l_A 191 ---------STDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSI 260 (795)
T ss_dssp ---------SSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSC
T ss_pred ---------CCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCcccc
Confidence 4545889998877643321 12356788898888876554 44455588999887765433221
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-------CceeeecccCCCceeeeeeeeeeCCCeeEE
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-------GKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-------~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~ 234 (641)
....|.++...++|.+.+ |+.+ -+.+||..+.+........ +..|.++.... ...+..|..++-+.
T Consensus 261 ~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-----~g~lWigt~~~Gl~ 333 (795)
T 4a2l_A 261 SSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-----QGGMWLGTYFGGLN 333 (795)
T ss_dssp SCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-----TSCEEEEESSSCEE
T ss_pred CCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-----CcCEEEEECCCCeE
Confidence 135699999988887554 4445 5889998776544332111 12222221110 01133444556677
Q ss_pred EecCCCcceeeec--------CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc------------ceE-EE
Q psy9327 235 ICNRKMEPLCNIH--------ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL------------PIY-IT 293 (641)
Q Consensus 235 i~d~~~~~~~~~~--------~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~------------p~~-~~ 293 (641)
.++.....+..+. ....|.++..+++|. |+.|+.++-+..++...+.+..+.. .+. +.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEE
T ss_pred EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEE
Confidence 7774433333222 145689999998876 6667766556667766665543321 122 23
Q ss_pred EEcCcE-EEEEeCCCCeEEEEeCCcc
Q psy9327 294 KIKGNQ-VYYLDRECSPHVLRIDPTE 318 (641)
Q Consensus 294 ~~~g~~-v~~~~~dg~i~v~~~~~~~ 318 (641)
.+.... ++.+..++-+..++.+++.
T Consensus 413 ~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 413 VDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 344455 7777776667776655543
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.12 E-value=2.5e-05 Score=86.03 Aligned_cols=177 Identities=10% Similarity=-0.025 Sum_probs=118.0
Q ss_pred CCeEEEEE-c-cCCCeEEEEe------------------CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEe
Q psy9327 10 ARVKGLSF-H-PKRPWILSSL------------------HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69 (641)
Q Consensus 10 ~~V~~l~f-s-pdg~~Lasg~------------------~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sg 69 (641)
....++++ + |++.++++++ .++.+.+.|..+.+.+.++.--. .-..++++|+|.+++++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt 212 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFST 212 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEE
Confidence 45788998 5 9999998885 24689999999988877775322 44778999999999998
Q ss_pred ceeeEEeeec---------eeeec------ccCCcceeeEEEeeCCCeEEEEECCC--Cee-EEEEccCCCCeEEEEEcc
Q psy9327 70 GKMIVMAYQG---------CILES------RNEPCLFRIKSVLGDDYKIKVWNYKQ--RKC-IFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 70 s~~~~~~~~~---------~~~~~------~~~~~~~~~~~~~s~Dg~I~vWD~~t--~~~-~~~~~~h~~~V~~v~fsp 131 (641)
+......+.- .+... ...+...... -+.|.|.|..+ ++. +..+..- ....++.++|
T Consensus 213 ~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~-----i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP 286 (595)
T 1fwx_A 213 SYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE-----LNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAP 286 (595)
T ss_dssp ESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE-----ETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECT
T ss_pred ecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE-----ECcEEEEeCcccCCceeEEEEecC-CCceEEEEcC
Confidence 7322110000 00000 0000000111 14599999998 555 5555432 2446899999
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCe------------eEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 132 EYPWILSAS-DDQTIRIWYWQSRN------------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 132 ~~~~l~sgs-~Dg~I~vWd~~~~~------------~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
||+++++++ .+.+|.++|+.+.+ ...... -......++|+|+|...++.-.|+.|.+||+..
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999776655 68899999998653 223332 334678899999995556677899999999876
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.08 E-value=9.5e-05 Score=81.41 Aligned_cols=215 Identities=10% Similarity=0.053 Sum_probs=139.6
Q ss_pred cCCCeEEEEeC-CCcEEEEECccCcccccccc-cccCeEEEEE-e-CCCCEEEEeceeeEE-eeeceeeecccCCcceee
Q psy9327 19 PKRPWILSSLH-NGVIQLWDYRMNTLLEKFDE-HEGPVRGICF-H-NQQPIFVSGGKMIVM-AYQGCILESRNEPCLFRI 93 (641)
Q Consensus 19 pdg~~Lasg~~-dg~I~iWD~~~~~~l~~~~~-h~~~V~~i~f-s-p~~~~l~sgs~~~~~-~~~~~~~~~~~~~~~~~~ 93 (641)
+||+++..... ++.|.+-|+.+.+....++- ......++++ + |++.+++++++.... .-+|.. .
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~-----------l 167 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTN-----------M 167 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSS-----------T
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcc-----------c
Confidence 38888877665 56799999999887664432 2345789998 5 999999888621110 001111 1
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCC------------------------------
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ------------------------------ 143 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg------------------------------ 143 (641)
...--.++.+.+.|..+.+...++.--. ....++++|+|+++++++.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 1111256789999999999988876322 456788999999999888553
Q ss_pred --------eEEEEECCC--Cee-EEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCCceeeeccCCCceeeec
Q psy9327 144 --------TIRIWYWQS--RNC-ICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGLRKKNVAPGMGKLVLSM 211 (641)
Q Consensus 144 --------~I~vWd~~~--~~~-i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~~~~~~~~~~~~~v~s~ 211 (641)
.|.|.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+.. +.+ + +
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~--~----l 317 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYE--N----A 317 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHS--C----C
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--ccc--c----c
Confidence 366777766 433 344431 12345789999999777665 5789999999864321 000 0 0
Q ss_pred ccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEEEec-CCeEEEEEcCCC
Q psy9327 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDH 280 (641)
Q Consensus 212 ~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s-~~~k~~l~~~~~ 280 (641)
+.+......+..+.....++|+|+| .+|++. -+..+..|+.+.
T Consensus 318 -------------------------~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 318 -------------------------DPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -------------------------CGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred -------------------------CcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 0011222333446677889999999 777765 677888888654
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.06 E-value=0.00062 Score=78.54 Aligned_cols=158 Identities=9% Similarity=0.046 Sum_probs=98.7
Q ss_pred CeEEEEEc-cCCCeEEEEeC-CC----cEEEEECccC-ccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 11 RVKGLSFH-PKRPWILSSLH-NG----VIQLWDYRMN-TLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 11 ~V~~l~fs-pdg~~Lasg~~-dg----~I~iWD~~~~-~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.+.+.+|| |||++||-+.. +| +|+++|+.++ +.+.. +. ....+++|+||++.|+..... .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d------~--- 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKD------E--- 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEEC------T---
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEEC------C---
Confidence 57889999 99998885543 33 4999999988 64321 21 223568999999888776510 0
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc-cCCCCeEEEEEccCCCEEEEEe---CCCeEEEEECCCC--e
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL-GHLDYIRTTFFHHEYPWILSAS---DDQTIRIWYWQSR--N 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~-~h~~~V~~v~fsp~~~~l~sgs---~Dg~I~vWd~~~~--~ 154 (641)
......|.++++.++.. ...+. .+......+.|+|++++|+..+ ....|+++|+.++ .
T Consensus 243 --------------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 243 --------------TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp --------------TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred --------------CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 00113688888887642 23333 2334567889999999887655 3457888998875 2
Q ss_pred e-EEEE-ccCCCCEEEEEEecCCCEEEEEeCC--C--eEEEEecCC
Q psy9327 155 C-ICVL-TGHNHYVMCAQFHPTDDIVVSASLD--Q--TIRVWDISG 194 (641)
Q Consensus 155 ~-i~~l-~~h~~~V~sl~fsp~g~~lvSgs~D--g--tI~IWD~~~ 194 (641)
. +..+ .+..+...++.|+..+.+++....+ + .|..+|+.+
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 2 1333 3344555666666544455555444 2 566667664
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=0.0015 Score=70.06 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=100.8
Q ss_pred CCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
.....++++| ++..|..+...+.|+.+|...++. ..+........+|+|++++.+|.++..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~----------------- 198 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITND----------------- 198 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEEC-----------------
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeC-----------------
Confidence 3567899998 455566665558899999876654 333334556789999999996666641
Q ss_pred cceeeEEEeeCCC----eEEEEECCCCeeE--EEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEc-
Q psy9327 89 CLFRIKSVLGDDY----KIKVWNYKQRKCI--FTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLT- 160 (641)
Q Consensus 89 ~~~~~~~~~s~Dg----~I~vWD~~t~~~~--~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~- 160 (641)
.++ .+.+.+. .+... ..+.. .....+++++| ++.++++-..++.|..+|...+.......
T Consensus 199 ----------~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 199 ----------QNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp ----------CSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ----------CCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 111 2333332 22111 22221 23456788999 77777777778899999998776422222
Q ss_pred cCCCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC
Q psy9327 161 GHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 194 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~ 194 (641)
+.......++|+|+|+ ++++-...+.|..+|...
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 2224578899999999 455555678999988764
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.99 E-value=0.00077 Score=75.42 Aligned_cols=274 Identities=8% Similarity=0.017 Sum_probs=161.0
Q ss_pred CCeEEEEeC-CCcEEEEEC-ccCccccccccccc-----------CeEEEEEeCCCCE----EEEeceeeEEeeeceeee
Q psy9327 21 RPWILSSLH-NGVIQLWDY-RMNTLLEKFDEHEG-----------PVRGICFHNQQPI----FVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 21 g~~Lasg~~-dg~I~iWD~-~~~~~l~~~~~h~~-----------~V~~i~fsp~~~~----l~sgs~~~~~~~~~~~~~ 83 (641)
+..++.++. ++.|.-+|. .+|+.+.+++.... ...+++.+|.+.. ++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t------------- 128 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ------------- 128 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-------------
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-------------
Confidence 446777777 899999999 89998877753221 1123455443322 55555
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeEE-EEEccCCCEEEEEe------CCCeEEEEECCC
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIRT-TFFHHEYPWILSAS------DDQTIRIWYWQS 152 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~~-v~fsp~~~~l~sgs------~Dg~I~vWd~~~ 152 (641)
.|+.+..+|.++|+.+........ .+.+ -.. .++ .++.++ .++.|+-+|.++
T Consensus 129 ---------------~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~T 191 (599)
T 1w6s_A 129 ---------------LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKT 191 (599)
T ss_dssp ---------------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTT
T ss_pred ---------------CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCC
Confidence 799999999999999887653220 1111 111 134 444444 389999999999
Q ss_pred CeeEEEEccCCCC-------------------------------------E-EEEEEecCCCEEEEEeCCC---------
Q psy9327 153 RNCICVLTGHNHY-------------------------------------V-MCAQFHPTDDIVVSASLDQ--------- 185 (641)
Q Consensus 153 ~~~i~~l~~h~~~-------------------------------------V-~sl~fsp~g~~lvSgs~Dg--------- 185 (641)
++.+..+...... + ...++.++..+++.++.++
T Consensus 192 G~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~ 271 (599)
T 1w6s_A 192 GEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRP 271 (599)
T ss_dssp CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSC
T ss_pred CcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccC
Confidence 9988776532111 0 1345667777888777653
Q ss_pred -------eEEEEecCCCceeeeccCCCceeeecc-cCCCce-eee-------eeeeeeCCCeeEEEec-CCCcceeeecC
Q psy9327 186 -------TIRVWDISGLRKKNVAPGMGKLVLSMK-SKHPIW-KYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHE 248 (641)
Q Consensus 186 -------tI~IWD~~~~~~~~~~~~~~~~v~s~~-~~~~v~-~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~ 248 (641)
+|..+|..+++.+=.+....+....+. ...|+. +.. ..+..+..++.+.+.| .+++.+.....
T Consensus 272 gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 272 GDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp SCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 899999999887644432111100000 011111 110 1134466788888888 44555443321
Q ss_pred C--------------cce--------------------------EEEEEcCCccEEEEecC-------------------
Q psy9327 249 N--------------TRV--------------------------KSGAWDESGVFIYTTSN------------------- 269 (641)
Q Consensus 249 ~--------------~~I--------------------------~sla~~p~g~~L~t~s~------------------- 269 (641)
. .++ ..+++||+...++...+
T Consensus 352 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~ 431 (599)
T 1w6s_A 352 DDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFF 431 (599)
T ss_dssp STTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcce
Confidence 1 111 24678887666665432
Q ss_pred --------------------CeEEEEEcCCCCeEecccc----ceE--EEEEcCcEEEEEeCCCCeEEEEeCCcchhhhH
Q psy9327 270 --------------------HIKYAIVNGDHGIIRTLDL----PIY--ITKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 323 (641)
Q Consensus 270 --------------------~~k~~l~~~~~g~I~~~d~----p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~ 323 (641)
.+.+..++..+|.+. |.. |.. .....+..+|..+.|+.+++++..+++...+.
T Consensus 432 ~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 432 VGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYK-WEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEE-EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ecccceeccCCcCCcccCCCcCeEEEEECCCCCEE-eEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 245555555555432 211 111 12346788999999999999999998877665
Q ss_pred HH
Q psy9327 324 AL 325 (641)
Q Consensus 324 ~l 325 (641)
.+
T Consensus 511 ~l 512 (599)
T 1w6s_A 511 KI 512 (599)
T ss_dssp EC
T ss_pred eC
Confidence 44
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.98 E-value=0.0053 Score=63.75 Aligned_cols=155 Identities=11% Similarity=0.010 Sum_probs=98.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
+..+|.+..+ ..+|+.+.. ..|+..+....... .+......+.+++|++.+..|..+.
T Consensus 34 d~~~C~~~~~-~~~ll~~~~-~~I~~i~~~g~~~~-~~~~~~~~~~~l~~d~~~~~ly~~D------------------- 91 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANR-IDIRQVLPHRSEYT-LLLNNLENAIALDFHHRRELVFWSD------------------- 91 (349)
T ss_dssp TSSCEEESSS-CCEEEEECB-SCEEEECTTSCCEE-EEECSCSCEEEEEEETTTTEEEEEE-------------------
T ss_pred CCCccccccc-CceeEeecc-cceEEEeCCCCeeE-EeecCCCceEEEEEeccccEEEEEe-------------------
Confidence 4445555555 344554433 45877887654332 2222334578999998766666654
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
...+.|..++...+.....+........++++.+.+ .++++-...+.|.+.+.........+.........
T Consensus 92 --------~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~ 163 (349)
T 3v64_C 92 --------VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 163 (349)
T ss_dssp --------TTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEE
T ss_pred --------ccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcce
Confidence 277899999998765444444344556789999754 45566667789999998765443344445567889
Q ss_pred EEEecCCCEEE-EEeCC-CeEEEEecCC
Q psy9327 169 AQFHPTDDIVV-SASLD-QTIRVWDISG 194 (641)
Q Consensus 169 l~fsp~g~~lv-Sgs~D-gtI~IWD~~~ 194 (641)
++++|.+..|+ +-..+ +.|...++..
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 99999655444 44444 6677776654
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.00034 Score=79.55 Aligned_cols=242 Identities=9% Similarity=0.031 Sum_probs=145.6
Q ss_pred CCeEEEEeCCCcEEEEECccCcccccccccccC-eEEEEEeC--CCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP-VRGICFHN--QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 21 g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~-V~~i~fsp--~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
+..++.++.||.|..+|..+|+.+.+++..... ...+..+| .+..++++... .. .
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~---------------~~-------~ 174 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG---------------AE-------Y 174 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBC---------------TT-------T
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCC---------------CC-------c
Confidence 457888889999999999999988777542110 00000011 12234443200 00 0
Q ss_pred eCCCeEEEEECCCCeeEEEEccC--C-C----------------------------CeEEEEEccCCCEEEEEeCCC---
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGH--L-D----------------------------YIRTTFFHHEYPWILSASDDQ--- 143 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h--~-~----------------------------~V~~v~fsp~~~~l~sgs~Dg--- 143 (641)
+.++.|..+|.++|+.+.++... . . ....+++.|+...++.++.++
T Consensus 175 ~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w 254 (668)
T 1kv9_A 175 GVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPW 254 (668)
T ss_dssp CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred CCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcc
Confidence 02689999999999999887531 0 0 012368888888888887776
Q ss_pred ----------------eEEEEECCCCeeEEEEcc--CC-------CCEEEEEEecCCC---EEEEEeCCCeEEEEecCCC
Q psy9327 144 ----------------TIRIWYWQSRNCICVLTG--HN-------HYVMCAQFHPTDD---IVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 144 ----------------~I~vWd~~~~~~i~~l~~--h~-------~~V~sl~fsp~g~---~lvSgs~DgtI~IWD~~~~ 195 (641)
.|..+|.++++.+..+.. |. .+.....+..+|. .++.++.+|.+.++|..++
T Consensus 255 ~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 255 NREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred ccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 499999999998877753 32 2333333444665 6889999999999999999
Q ss_pred ceeeeccC------------CCceee--------------------------ecccCCCceee-----ee----------
Q psy9327 196 RKKNVAPG------------MGKLVL--------------------------SMKSKHPIWKY-----CK---------- 222 (641)
Q Consensus 196 ~~~~~~~~------------~~~~v~--------------------------s~~~~~~v~~~-----~~---------- 222 (641)
+.+...+- .+..+. +.......+-+ +.
T Consensus 335 ~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 335 KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred CEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 87632211 011110 00000000000 00
Q ss_pred ---eee------------eeCCCeeEEEec-CCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe
Q psy9327 223 ---PVK------------YCNPKHTLHICN-RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284 (641)
Q Consensus 223 ---~l~------------s~~~d~~I~i~d-~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~ 284 (641)
.+. ....++.+..|| .+++.+.......+.........+..++.++.++.+..++.++|.+.
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 000 112347899999 56666656555555554555556778888889999999998877643
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.96 E-value=0.0077 Score=69.57 Aligned_cols=256 Identities=10% Similarity=0.089 Sum_probs=152.5
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
...|.++...++|. |..|+.++-+..||..+++.. .+ ......|.++...+++.+.+..
T Consensus 362 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lWigt--------------- 424 (781)
T 3v9f_A 362 NKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGNLWFGT--------------- 424 (781)
T ss_dssp SSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSCEEEEE---------------
T ss_pred CcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCCEEEEe---------------
Confidence 35699999988887 556665666889997665332 22 1234678999888777765533
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.++-+..+|..+++...... .....|.++...+++.+.+ |+. +.+..||..+++........
T Consensus 425 --------------~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 425 --------------YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp --------------TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred --------------ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 55678889988776433221 1346799999888887544 444 56889998876543332222
Q ss_pred -----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC---Cceeeeccc--CCCceeeeeeeeeeCCCee
Q psy9327 163 -----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLVLSMKS--KHPIWKYCKPVKYCNPKHT 232 (641)
Q Consensus 163 -----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~---~~~v~s~~~--~~~v~~~~~~l~s~~~d~~ 232 (641)
...|.++...++|.+.+ |+.++-+..||..+.+........ ...+.++.. ...+| .+..+|.
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-------i~T~~Gl 560 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMW-------LATGEGL 560 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEE-------EEETTEE
T ss_pred ccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEE-------EEECCCc
Confidence 46799999888887655 444344777888766543322111 122333221 12222 2334555
Q ss_pred EEEecCCCcceeeecC-----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccc----------eEEEEEcC
Q psy9327 233 LHICNRKMEPLCNIHE-----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP----------IYITKIKG 297 (641)
Q Consensus 233 I~i~d~~~~~~~~~~~-----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p----------~~~~~~~g 297 (641)
+..+|.....+..+.. ...|.++..+++|. |+.++.+| +..++.+++.++.++.. -......+
T Consensus 561 v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~-lW~~t~~G-l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~ 638 (781)
T 3v9f_A 561 VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN-IWASTNTG-ISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHN 638 (781)
T ss_dssp EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSC-EEEECSSC-EEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTT
T ss_pred eEEECCCCCcEEEccccCCCCCceEEEEEECCCCC-EEEEcCCc-eEEEECCCCceEEecccCCccccccccCceEECCC
Confidence 4777754443433322 34578889998886 55555555 45556677776655321 12233445
Q ss_pred cEEEEEeCCC
Q psy9327 298 NQVYYLDREC 307 (641)
Q Consensus 298 ~~v~~~~~dg 307 (641)
..++-++.+|
T Consensus 639 G~l~~g~~~G 648 (781)
T 3v9f_A 639 GLIYFGSING 648 (781)
T ss_dssp SCEEEEETTE
T ss_pred CEEEEECCCc
Confidence 5566666666
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.91 E-value=0.002 Score=72.00 Aligned_cols=273 Identities=10% Similarity=0.001 Sum_probs=156.3
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCe---------EEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV---------RGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V---------~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
..++.++.++.|..+|..+|+.+.+++.....- .+++. .+..++.++
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t---------------------- 124 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGT---------------------- 124 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEE----------------------
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEe----------------------
Confidence 345666664459999999999888775432210 11222 123444444
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCC----CeE-EEEEcc---CCC-EEEEEe------CCCeEEEEECCCCeeEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLD----YIR-TTFFHH---EYP-WILSAS------DDQTIRIWYWQSRNCIC 157 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~----~V~-~v~fsp---~~~-~l~sgs------~Dg~I~vWd~~~~~~i~ 157 (641)
.|+.+..+|.++|+.+..+..... .+. .-.... +++ .++.++ .++.|.-+|..+++.+.
T Consensus 125 ------~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 125 ------LDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp ------TTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred ------CCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 799999999999999887754321 111 011111 122 555554 37899999999998876
Q ss_pred EEccCCCCE-----------------------------------------EEEEEecCCCEEEEEeC-------------
Q psy9327 158 VLTGHNHYV-----------------------------------------MCAQFHPTDDIVVSASL------------- 183 (641)
Q Consensus 158 ~l~~h~~~V-----------------------------------------~sl~fsp~g~~lvSgs~------------- 183 (641)
........+ ..+++.|+..+++.++.
T Consensus 199 ~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~ 278 (582)
T 1flg_A 199 MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAK 278 (582)
T ss_dssp EEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCT
T ss_pred ecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccC
Confidence 654211000 13466777777776663
Q ss_pred -------C----CeEEEEecCCCceeeeccCCCceeeecc-cCCCceeee--------eeeeeeCCCeeEEEec-CCCcc
Q psy9327 184 -------D----QTIRVWDISGLRKKNVAPGMGKLVLSMK-SKHPIWKYC--------KPVKYCNPKHTLHICN-RKMEP 242 (641)
Q Consensus 184 -------D----gtI~IWD~~~~~~~~~~~~~~~~v~s~~-~~~~v~~~~--------~~l~s~~~d~~I~i~d-~~~~~ 242 (641)
| +.|..+|..+++.+=.+....+...... ...|+..-. ..+..++.++.+.++| .+++.
T Consensus 279 gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 358 (582)
T 1flg_A 279 GGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL 358 (582)
T ss_dssp TSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCE
Confidence 2 6899999999887654432111000000 012222110 1244566788888888 44554
Q ss_pred eeeecCCc--------------c--------------------------------eEEEEEcCCccEEEEec--------
Q psy9327 243 LCNIHENT--------------R--------------------------------VKSGAWDESGVFIYTTS-------- 268 (641)
Q Consensus 243 ~~~~~~~~--------------~--------------------------------I~sla~~p~g~~L~t~s-------- 268 (641)
+....... + -..+++||+...++...
T Consensus 359 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~ 438 (582)
T 1flg_A 359 QNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYW 438 (582)
T ss_dssp EEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEE
T ss_pred ecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeee
Confidence 43332211 0 01356777655555433
Q ss_pred -------------------------CCeEEEEEcCCCCeEecccc----ceE--EEEEcCcEEEEEeCCCCeEEEEeCCc
Q psy9327 269 -------------------------NHIKYAIVNGDHGIIRTLDL----PIY--ITKIKGNQVYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 269 -------------------------~~~k~~l~~~~~g~I~~~d~----p~~--~~~~~g~~v~~~~~dg~i~v~~~~~~ 317 (641)
..+.+..++..+|.+. |.. |.. .....+..++.++.|+.+++++..++
T Consensus 439 ~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 439 TEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVV-WEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp ECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEE-EEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEE-EEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 2466667776666553 221 111 12345788999999999999999988
Q ss_pred chhhhHHH
Q psy9327 318 EFKFKLAL 325 (641)
Q Consensus 318 ~~~~k~~l 325 (641)
+...+..+
T Consensus 518 ~~lW~~~~ 525 (582)
T 1flg_A 518 KELWKFQT 525 (582)
T ss_dssp CEEEEEEC
T ss_pred CEEEEecC
Confidence 87766543
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.91 E-value=0.012 Score=59.99 Aligned_cols=143 Identities=5% Similarity=-0.081 Sum_probs=90.1
Q ss_pred eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
+|+.+.. ..|+..|+.+.+..... .......+++|++.+..+..+. ..++.
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D---------------------------~~~~~ 53 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSD---------------------------LSQRM 53 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEE---------------------------TTTTE
T ss_pred EEEEECC-CeEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEE---------------------------CCCCc
Confidence 4555544 46899998876544333 2345678999998766666554 26789
Q ss_pred EEEEECCC----CeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQ----RKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t----~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|..+|... ......+........++++.+.+ .+.++-..++.|.+.|.........+.........++++|.+..
T Consensus 54 I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ 133 (316)
T 1ijq_A 54 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 133 (316)
T ss_dssp EEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred EEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCE
Confidence 99999876 22222333333456789998754 45566677889999998755433333434567889999996665
Q ss_pred EEEEeCC--CeEEEEecCC
Q psy9327 178 VVSASLD--QTIRVWDISG 194 (641)
Q Consensus 178 lvSgs~D--gtI~IWD~~~ 194 (641)
++.+... +.|...++..
T Consensus 134 ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 134 MYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEEccCCCCeEEEEcCCC
Confidence 5544432 5666666543
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.90 E-value=0.0015 Score=72.77 Aligned_cols=272 Identities=10% Similarity=0.005 Sum_probs=159.2
Q ss_pred CCeEEEEeC-CCcEEEEEC-ccCccccccccccc-C----------eEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 21 RPWILSSLH-NGVIQLWDY-RMNTLLEKFDEHEG-P----------VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 21 g~~Lasg~~-dg~I~iWD~-~~~~~l~~~~~h~~-~----------V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
+..++.++. ++.|..+|. .+|+.+.+++.... . -.+++. .+..++.++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~----------------- 122 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQ----------------- 122 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEEC-----------------
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEe-----------------
Confidence 445667777 899999999 89988877643211 0 011222 234555554
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC--C--CeEE-EEEccCCCEEEEEeC------CCeEEEEECCCCeeE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL--D--YIRT-TFFHHEYPWILSASD------DQTIRIWYWQSRNCI 156 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~--~--~V~~-v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i 156 (641)
.|+.+..+|..+|+.+.++.... . .+.+ -.. .++ .++.++. ++.|..+|.++++.+
T Consensus 123 -----------~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 123 -----------ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp -----------TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred -----------CCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 79999999999999988765321 0 1111 011 134 4555544 799999999999988
Q ss_pred EEEccCCCC--------------------------------------EEEEEEecCCCEEEEEeCC--------------
Q psy9327 157 CVLTGHNHY--------------------------------------VMCAQFHPTDDIVVSASLD-------------- 184 (641)
Q Consensus 157 ~~l~~h~~~--------------------------------------V~sl~fsp~g~~lvSgs~D-------------- 184 (641)
.++...... -..+++.++...++.++.+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 776532110 0135667776777766532
Q ss_pred --CeEEEEecCCCceeeeccCCCceeeec-ccCCCceeee-------eeeeeeCCCeeEEEec-CCCcceeeecCC----
Q psy9327 185 --QTIRVWDISGLRKKNVAPGMGKLVLSM-KSKHPIWKYC-------KPVKYCNPKHTLHICN-RKMEPLCNIHEN---- 249 (641)
Q Consensus 185 --gtI~IWD~~~~~~~~~~~~~~~~v~s~-~~~~~v~~~~-------~~l~s~~~d~~I~i~d-~~~~~~~~~~~~---- 249 (641)
+.|..+|..+++.+=..+...+..... ....|+..-. ..+..+..++.+...| .+++.+......
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 369999999988764443211100000 0112221110 1134456678888888 445544433221
Q ss_pred ----------cce--------------------------EEEEEcCCccEEEEecC------------------------
Q psy9327 250 ----------TRV--------------------------KSGAWDESGVFIYTTSN------------------------ 269 (641)
Q Consensus 250 ----------~~I--------------------------~sla~~p~g~~L~t~s~------------------------ 269 (641)
.++ ..++++|++..++..++
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 111 24578888777776542
Q ss_pred -------------CeEEEEEcCCCCeEeccccc----e--EEEEEcCcEEEEEeCCCCeEEEEeCCcchhhhHHH
Q psy9327 270 -------------HIKYAIVNGDHGIIRTLDLP----I--YITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLAL 325 (641)
Q Consensus 270 -------------~~k~~l~~~~~g~I~~~d~p----~--~~~~~~g~~v~~~~~dg~i~v~~~~~~~~~~k~~l 325 (641)
.+.+..++..+|.+. |..+ . ......+..++..+.||.+++++..+++...+..+
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~-W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAK-WTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEE-EEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEE-EEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 467777777776653 2111 1 11234578888899999999999988877665443
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.86 E-value=0.0099 Score=62.59 Aligned_cols=152 Identities=11% Similarity=0.007 Sum_probs=96.6
Q ss_pred EEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 13 KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 13 ~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
.|-+..+ ..+|+.+.. ..|+..+...+...... .......+++|++.+..|..+.
T Consensus 80 ~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D---------------------- 134 (386)
T 3v65_B 80 SCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSD---------------------- 134 (386)
T ss_dssp CEEECSS-CCEEEEECB-SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEE----------------------
T ss_pred eECCccc-cceeEeecC-ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEe----------------------
Confidence 3444444 345554443 56888887665433222 3344678999998766666554
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCC-CEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEE
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~-~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~f 171 (641)
...+.|+.++...+.....+........++++.+.+ .++++-...+.|.+.++........+.........+++
T Consensus 135 -----~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav 209 (386)
T 3v65_B 135 -----VTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 209 (386)
T ss_dssp -----TTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE
T ss_pred -----CCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE
Confidence 278899999998765444444444456789999754 45566666788999988755444444445567889999
Q ss_pred ecCCCEEEEEe-CC-CeEEEEecCC
Q psy9327 172 HPTDDIVVSAS-LD-QTIRVWDISG 194 (641)
Q Consensus 172 sp~g~~lvSgs-~D-gtI~IWD~~~ 194 (641)
+|.+..|+.+. .+ +.|...+...
T Consensus 210 dp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 210 HPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EcCCCeEEEeccCCCCEEEEEeCCC
Confidence 98766554443 33 5666666554
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.014 Score=67.33 Aligned_cols=257 Identities=11% Similarity=0.066 Sum_probs=152.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc----------ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD----------EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~----------~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
...|.++...++|. |..|+.++-|..++..++.. ..+. .....|.++...+++.+.+..
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt--------- 380 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGT--------- 380 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSCEEEEE---------
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCCEEEEe---------
Confidence 46799999999887 66677667788898765432 2221 124579999988877755443
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE---ccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCee
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~---~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~ 155 (641)
.++-|..||..+++..... ......|.++...+++.+.+ |+.++.+..+|.++++.
T Consensus 381 --------------------~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 381 --------------------DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp --------------------BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred --------------------CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 4566888887755432211 12346789999888887544 66677899999887764
Q ss_pred EEEEc--cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCC-----Cceeeeccc--CCCceeeeeeeee
Q psy9327 156 ICVLT--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-----GKLVLSMKS--KHPIWKYCKPVKY 226 (641)
Q Consensus 156 i~~l~--~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~-----~~~v~s~~~--~~~v~~~~~~l~s 226 (641)
..... .....|.++...+++.+.+ |+. +-+..||..+++........ ...+.++.. ...+ ..
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-------Wi 510 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-------WI 510 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-------EE
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-------EE
Confidence 32221 1346799998887776444 455 56888998776543322111 122332211 1122 22
Q ss_pred eCCCeeEEEecCCCcceeeecC-----CcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEecccc----c---e-EEE
Q psy9327 227 CNPKHTLHICNRKMEPLCNIHE-----NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL----P---I-YIT 293 (641)
Q Consensus 227 ~~~d~~I~i~d~~~~~~~~~~~-----~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~----p---~-~~~ 293 (641)
+..++-+..+|.....+..+.. ...|.++..+++|. ++.++..|-+..++.+++.+..+.. | + .+.
T Consensus 511 gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 511 GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EEEEECCCceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 3333346667754444443332 45688999998887 4445557765777776665544321 1 2 223
Q ss_pred EEcCcEEEEEeCCC
Q psy9327 294 KIKGNQVYYLDREC 307 (641)
Q Consensus 294 ~~~g~~v~~~~~dg 307 (641)
.+....++.++.+|
T Consensus 590 ~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 590 EDKNGNIWASTNTG 603 (781)
T ss_dssp ECSSSCEEEECSSC
T ss_pred ECCCCCEEEEcCCc
Confidence 44456677776665
No 265
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.75 E-value=0.00071 Score=67.44 Aligned_cols=149 Identities=9% Similarity=-0.011 Sum_probs=108.8
Q ss_pred EEEEccCCCeEEE-EeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCccee
Q psy9327 14 GLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 14 ~l~fspdg~~Las-g~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
+++++ +..|+. ...++.+.++|..+.+.+.++..- .+ .+..+++++..++++.
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~-~g~glt~Dg~~l~vs~---------------------- 123 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK-DGWGLATDGKILYGSD---------------------- 123 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SS-SCCEEEECSSSEEEEC----------------------
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CC-CeEEEEECCCEEEEEC----------------------
Confidence 44444 444544 446899999999999988888532 11 2345667887777776
Q ss_pred eEEEeeCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC-----
Q psy9327 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH----- 162 (641)
Q Consensus 93 ~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h----- 162 (641)
.+++|.++|..+.+.+.++.-.. ..+..+.|. ++..++....++.|.+.|..+++.+..+.-.
T Consensus 124 ------gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~ 196 (266)
T 2iwa_A 124 ------GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK 196 (266)
T ss_dssp ------SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH
T ss_pred ------CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 68899999999998888776322 246788888 6766666667899999999999988887521
Q ss_pred --------CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCCC
Q psy9327 163 --------NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 163 --------~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~~ 195 (641)
......++|+|+++ +++++...+++.+.++...
T Consensus 197 ~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 197 LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 13568999999986 5556667889999988664
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.73 E-value=0.036 Score=58.59 Aligned_cols=144 Identities=5% Similarity=-0.086 Sum_probs=93.3
Q ss_pred CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
.+|+.+. ...|+..|+....... +-.....+.+++|++.+..|..+. ...+
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD---------------------------~~~~ 134 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSD---------------------------LSQR 134 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEE---------------------------TTTT
T ss_pred ceeEEec-cceeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEe---------------------------cCCC
Confidence 3555554 4678888887654333 233456788999999766666655 2678
Q ss_pred eEEEEECCCC----eeEEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCC
Q psy9327 102 KIKVWNYKQR----KCIFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176 (641)
Q Consensus 102 ~I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~ 176 (641)
.|+.+++... .....+........++++.+ .+.+.++-...+.|.+.++........+.........++++|.+.
T Consensus 135 ~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 135 MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT
T ss_pred eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC
Confidence 9999998752 23333444556788999998 455666667788999999876654444444556688999999665
Q ss_pred EEEEEe-C-CCeEEEEecCC
Q psy9327 177 IVVSAS-L-DQTIRVWDISG 194 (641)
Q Consensus 177 ~lvSgs-~-DgtI~IWD~~~ 194 (641)
.|+.+. . .+.|...++..
T Consensus 215 ~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 215 FMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EEEEEECSSSCCEEEEETTS
T ss_pred eEEEEeCCCCCEEEEEeCCC
Confidence 555443 2 25666666544
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.72 E-value=0.007 Score=64.85 Aligned_cols=157 Identities=11% Similarity=0.038 Sum_probs=96.0
Q ss_pred CCeEEEEEccC--CCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPK--RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspd--g~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....+++|+|+ +..|+.+...+.|+.+|..+++... +........+++|++++.++++....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~--------------- 202 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQS--------------- 202 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCS---------------
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCC---------------
Confidence 35678999995 4445555544889999987775543 33345568999999999944443200
Q ss_pred CcceeeEEEeeCCC-eEEEEECCCCee-EEEEccCCCCeEEEEEcc-CCCEEEEEeCCCeEEEEECCCCeeEEEE-c-cC
Q psy9327 88 PCLFRIKSVLGDDY-KIKVWNYKQRKC-IFTLLGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVL-T-GH 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg-~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~-~h 162 (641)
..+. .+...+...+.. ...+. ......+++++| ++.++++-..++.|+.+|..++.....+ . +.
T Consensus 203 ----------~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~ 271 (433)
T 4hw6_A 203 ----------SDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT 271 (433)
T ss_dssp ----------CTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred ----------CcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence 0011 122222221110 01121 233456788999 7776667667889999998877652222 1 12
Q ss_pred CCCEEEEEEecCCCE-EEEEeCCCeEEEEecC
Q psy9327 163 NHYVMCAQFHPTDDI-VVSASLDQTIRVWDIS 193 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~ 193 (641)
...-..++|+|+++. .++-...+.|+.+|..
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 223357999999984 4555567899998875
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.71 E-value=0.034 Score=56.55 Aligned_cols=157 Identities=12% Similarity=-0.015 Sum_probs=99.2
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECcc---Cccccc-ccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRM---NTLLEK-FDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~---~~~l~~-~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
....+++|++++..|+ +-..++.|..+|... +..... +...-....++++.+.+..|..+.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d-------------- 95 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-------------- 95 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE--------------
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEE--------------
Confidence 4567999998766555 445578999999875 122222 222223557899987555554443
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-C-CeEEEEECCCCeeEEEE-cc
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-D-QTIRIWYWQSRNCICVL-TG 161 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-D-g~I~vWd~~~~~~i~~l-~~ 161 (641)
...+.|.+.|.........+.......++++++|.+..+..+.. . +.|...+..... ...+ ..
T Consensus 96 -------------~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~ 161 (316)
T 1ijq_A 96 -------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTE 161 (316)
T ss_dssp -------------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECS
T ss_pred -------------CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEEC
Confidence 26789999998754433333334467789999996665544443 3 688888875433 3333 33
Q ss_pred CCCCEEEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
.......++++|++..|+.+ +..+.|..+|..+
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 44568899999977665554 4567899998864
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.69 E-value=0.005 Score=68.84 Aligned_cols=161 Identities=9% Similarity=0.047 Sum_probs=101.7
Q ss_pred EEEccCCCe----EEEEeCCCcEEEEECccCccccccccccc----CeEE-EEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 15 LSFHPKRPW----ILSSLHNGVIQLWDYRMNTLLEKFDEHEG----PVRG-ICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 15 l~fspdg~~----Lasg~~dg~I~iWD~~~~~~l~~~~~h~~----~V~~-i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
++++|.+.. ++.++.|+.+..+|..+|+.+.+...... .+.+ -... ++ .+++++...
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~------------ 176 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGA------------ 176 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCG------------
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEeccc------------
Confidence 455444444 88888999999999999998776543210 1110 0111 23 334432000
Q ss_pred cCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCC-------------------------------------e-EEE
Q psy9327 86 NEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY-------------------------------------I-RTT 127 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~-------------------------------------V-~~v 127 (641)
. .+.++.|..+|.++|+.+.++...... + ..+
T Consensus 177 ------e----~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~ 246 (599)
T 1w6s_A 177 ------E----LGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY 246 (599)
T ss_dssp ------G----GTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred ------c----cCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccce
Confidence 0 003789999999999998887642211 0 134
Q ss_pred EEccCCCEEEEEeCC----------------CeEEEEECCCCeeEEEEcc--CC--------CCEEEEEEe-cCC---CE
Q psy9327 128 FFHHEYPWILSASDD----------------QTIRIWYWQSRNCICVLTG--HN--------HYVMCAQFH-PTD---DI 177 (641)
Q Consensus 128 ~fsp~~~~l~sgs~D----------------g~I~vWd~~~~~~i~~l~~--h~--------~~V~sl~fs-p~g---~~ 177 (641)
++.++...++.++.+ +.|..+|.++++.+..+.. |. .++. +... .+| ..
T Consensus 247 a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 247 AYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKL 325 (599)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEE
T ss_pred eEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEE
Confidence 566777777777655 4899999999998877653 21 1222 2232 467 56
Q ss_pred EEEEeCCCeEEEEecCCCceeee
Q psy9327 178 VVSASLDQTIRVWDISGLRKKNV 200 (641)
Q Consensus 178 lvSgs~DgtI~IWD~~~~~~~~~ 200 (641)
++.++.+|.+.+.|..+++.+-.
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEECCCcEEEEEECCCCCEeec
Confidence 78899999999999999887644
No 270
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.66 E-value=0.0011 Score=65.65 Aligned_cols=134 Identities=7% Similarity=0.021 Sum_probs=98.4
Q ss_pred cCCCeEEEEe-CCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEe
Q psy9327 19 PKRPWILSSL-HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97 (641)
Q Consensus 19 pdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (641)
++++.|.... .++.+.+||..+.+.+.++.... .+..+++++..|+.+.
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~Sd--------------------------- 143 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSD--------------------------- 143 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECC---------------------------
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEEC---------------------------
Confidence 3455555444 58999999999999998886432 3344556777777776
Q ss_pred eCCCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC----------
Q psy9327 98 GDDYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH---------- 162 (641)
Q Consensus 98 s~Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h---------- 162 (641)
.+++|.++|..+.+.+.++.-.. ..++.+.|. +|..++..-.+..|.+.|.++++.+..+.-.
T Consensus 144 -Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~ 221 (262)
T 3nol_A 144 -GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLP 221 (262)
T ss_dssp -SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCC
T ss_pred -CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccccc
Confidence 57889999999999888876422 334567776 6766666667889999999999988887532
Q ss_pred --CCCEEEEEEecCCCEEEEEeCC
Q psy9327 163 --NHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 163 --~~~V~sl~fsp~g~~lvSgs~D 184 (641)
.+..+.++|+|+++.|+..+..
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEETT
T ss_pred CcCCceEEEEEcCCCCEEEEECCC
Confidence 2356899999998877776653
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.63 E-value=0.018 Score=59.66 Aligned_cols=158 Identities=12% Similarity=0.041 Sum_probs=102.3
Q ss_pred CCeEEEEEccCCCeEEEE-eCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|++.+..|..+ ...+.|..++...+.....+........++++.+.+..|..+.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d------------------ 134 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD------------------ 134 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE------------------
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEc------------------
Confidence 346889999866655544 4678899999876543222222234457899998655555444
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCE-EEEEeCC-CeEEEEECCCCeeEEEEccCCCCE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW-ILSASDD-QTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~-l~sgs~D-g~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
...+.|.+.+.........+.......++++++|.+.. +++-..+ +.|...++................
T Consensus 135 ---------~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 135 ---------SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp ---------TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred ---------CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc
Confidence 26789999998755433334444567799999996554 4454445 788888876433222222334567
Q ss_pred EEEEEecCCCEEEEE-eCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVSA-SLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvSg-s~DgtI~IWD~~~ 194 (641)
..++|+|++..|..+ +..+.|..+|+..
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 899999876655544 4567888888865
No 272
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.55 E-value=0.092 Score=53.26 Aligned_cols=266 Identities=9% Similarity=0.093 Sum_probs=163.5
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.-.||..+.+|.-. ..+++++|+++++.+..+.- ..+|.--.|-.+..+-++.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT------------------------- 124 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT------------------------- 124 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEE-------------------------
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEEc-------------------------
Confidence 44688888777665 57899999999988777643 4677777886665544443
Q ss_pred EEeeCCCeEEEEECCC-CeeEEEEccCC----CCeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeeEEEEccC
Q psy9327 95 SVLGDDYKIKVWNYKQ-RKCIFTLLGHL----DYIRTTFFHHEYPWILSASD-------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t-~~~~~~~~~h~----~~V~~v~fsp~~~~l~sgs~-------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
+..|..|++.. ..+...|..|. ..|..-..+++.+|++..|- .|.+.+|..+.+ .-+.+.||
T Consensus 125 -----~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 198 (365)
T 2xzh_A 125 -----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 198 (365)
T ss_dssp -----SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS
T ss_pred -----CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeee
Confidence 56899999874 46777777664 35777788899999876543 478889997654 45677888
Q ss_pred CCCEEEEEEe--cCCC-EEEEEeC---CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 163 NHYVMCAQFH--PTDD-IVVSASL---DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 163 ~~~V~sl~fs--p~g~-~lvSgs~---DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
......+.+. +... +++-+.. .+.++|-++..... ..+...+. .+.++
T Consensus 199 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~--~~~~f~kk------------------------~vdi~ 252 (365)
T 2xzh_A 199 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPT--GNQPFPKK------------------------AVDVF 252 (365)
T ss_dssp EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCT--TCCCCCCE------------------------EEEEC
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCC--CCCCcccc------------------------cceee
Confidence 5543322221 1111 3333332 24677777633100 00111000 00000
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCCeE
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECSPH 310 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~i~ 310 (641)
=.. . ....-..++..++.-..++.-+.-|-+.+++.++|+.- .-..+++.... +..-+++..+.|.+.
T Consensus 253 fpp-----e-a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 253 FPP-----E-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp CCT-----T-CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred CCc-----c-ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 000 0 01334455777777677888888899999999998753 34555665443 456788899999999
Q ss_pred EEEeCCcchhhhHHHhccchHHHHHHHhcCccccchHHHHHHHHhcCCccchhhhhhhcCCcHH
Q psy9327 311 VLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGLSEE 374 (641)
Q Consensus 311 v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~D~~~r~~~l~~~g~~~la~~~a~~~~~~~~ 374 (641)
...+|.... +.++.+ ...+.++|.-.|.+.|++.+
T Consensus 327 ~v~v~~~~i--------------vpyi~~---------------~l~n~~LA~~lA~R~~LpGA 361 (365)
T 2xzh_A 327 SVCVEEENI--------------IPYITN---------------VLQNPDLALRMAVRNNNAGA 361 (365)
T ss_dssp EEEECTTTH--------------HHHHHH---------------TTCCHHHHHHHHHHTCC---
T ss_pred EEEECcccE--------------ehhhhh---------------cCCCHHHHHHHHHhcCCCCc
Confidence 999997443 333322 23455678888888887643
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.55 E-value=0.021 Score=60.05 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=102.8
Q ss_pred CCeEEEEEccCCCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCC
Q psy9327 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88 (641)
Q Consensus 10 ~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~ 88 (641)
..+.+++|++.+..|+ +-...+.|..++...+.....+........++++.+.+..|..+.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d------------------ 177 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD------------------ 177 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEE------------------
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEc------------------
Confidence 4577899998665555 445678899999876543222222233457899998665555544
Q ss_pred cceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCC-CeEEEEECCCCeeEEEEccCCCCE
Q psy9327 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDD-QTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 89 ~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~D-g~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
...+.|.+.++........+........+++++|.+..+. +-..+ +.|...+.................
T Consensus 178 ---------~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 248 (386)
T 3v65_B 178 ---------SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 248 (386)
T ss_dssp ---------TTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred ---------CCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe
Confidence 2677899998875543344444456789999998666544 44444 788888876543333333344567
Q ss_pred EEEEEecCCCEEEE-EeCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVS-ASLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvS-gs~DgtI~IWD~~~ 194 (641)
..++|+|++..|.. -+..+.|..+|+..
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 89999987655544 45567888888765
No 274
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.52 E-value=0.007 Score=59.82 Aligned_cols=126 Identities=8% Similarity=0.043 Sum_probs=87.8
Q ss_pred ccccccccccc--CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc
Q psy9327 42 TLLEKFDEHEG--PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119 (641)
Q Consensus 42 ~~l~~~~~h~~--~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~ 119 (641)
+.+.++ .|+. -..++.|+. +.+..+.+ .+|.|+++|+++++.+.++ -
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG----------------------------~~g~v~~iD~~Tgkv~~~~-l 92 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTG----------------------------HQGTLRQLSLESAQPVWME-R 92 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEET----------------------------TTTEEEECCSSCSSCSEEE-E
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcC----------------------------CCCEEEEEECCCCcEEeEE-C
Confidence 344555 4543 457899984 55556665 8889999999999988877 2
Q ss_pred CCCC-eEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 120 HLDY-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 120 h~~~-V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
.... --++++.. +.+.++.-.++.+.+||.++.+.+.++..... -..+ .+++..|+.+..+++|.++|..+.+..
T Consensus 93 ~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 93 LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGL--CYWNGKLVRSDGGTMLTFHEPDGFALV 168 (268)
T ss_dssp CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CCCE--EEETTEEEEECSSSEEEEECTTTCCEE
T ss_pred CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-eeEE--ecCCCEEEEECCCCEEEEEcCCCCeEE
Confidence 2222 23466643 34555666789999999999999998874322 2333 356888777777999999999998776
Q ss_pred eecc
Q psy9327 199 NVAP 202 (641)
Q Consensus 199 ~~~~ 202 (641)
..++
T Consensus 169 ~~I~ 172 (268)
T 3nok_A 169 GAVQ 172 (268)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.51 E-value=0.06 Score=56.84 Aligned_cols=160 Identities=10% Similarity=-0.053 Sum_probs=104.6
Q ss_pred CCCeEEEEEccCCCeEEEE-eCCCcEEEEECccCc----ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHPKRPWILSS-LHNGVIQLWDYRMNT----LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg-~~dg~I~iWD~~~~~----~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
-..+.+++|++.+..|..+ ..++.|+.++..... ....+........++++.+.+..|..+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d------------- 177 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------- 177 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE-------------
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE-------------
Confidence 4568899999866655554 457889999876521 2222222345678999998555555544
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-C-CCeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-D-DQTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~-Dg~I~vWd~~~~~~i~~l~~ 161 (641)
...+.|.+.|.........+.......++++++|.+..|..+. . .+.|...++...........
T Consensus 178 --------------~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 178 --------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp --------------TTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred --------------CCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 2678999999886654444444556689999999666555443 2 47888888865443333344
Q ss_pred CCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL 195 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~ 195 (641)
.......++++|++..|+.+. ..+.|..+|+...
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 446788999998777666554 4678888888653
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.50 E-value=0.1 Score=52.50 Aligned_cols=199 Identities=11% Similarity=-0.032 Sum_probs=110.2
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp 131 (641)
....+++|++++.++++-. .++.|..||...+ ....+. -.+.+.++++.+
T Consensus 32 ~~pegia~~~~g~lyv~d~----------------------------~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~ 81 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNH----------------------------EVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS 81 (306)
T ss_dssp CCEEEEEECTTSCEEEEET----------------------------TTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeC----------------------------CCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC
Confidence 4567899999998777765 7889999998754 333332 235688999999
Q ss_pred CCCEEEEEeCC--CeEEEEECCCCeeEEEEc-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce-eeeccCC---
Q psy9327 132 EYPWILSASDD--QTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK-KNVAPGM--- 204 (641)
Q Consensus 132 ~~~~l~sgs~D--g~I~vWd~~~~~~i~~l~-~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~-~~~~~~~--- 204 (641)
++.++++.... ..|..+|..+++...... ........++..+++..+++-+.++.|.++|..+++. .....+.
T Consensus 82 dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 82 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 99976665443 247777877776432222 1223344555555555555555688999999875421 1100000
Q ss_pred CceeeecccCCCceeeee--eeeeeCCCeeEEEecCCC--c--ceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcC
Q psy9327 205 GKLVLSMKSKHPIWKYCK--PVKYCNPKHTLHICNRKM--E--PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278 (641)
Q Consensus 205 ~~~v~s~~~~~~v~~~~~--~l~s~~~d~~I~i~d~~~--~--~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~ 278 (641)
....-.+...+.+ .... -..+-...+.|..++... . ....+........++++++|.+.++....+++..++.
T Consensus 162 ~~~~~~~~~pngi-s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 162 SNSESVFPAANGL-KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp SSTTCCSCSEEEE-EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred ccccCCCCcCCCc-CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 0000000000001 0000 012223456777777332 1 1111212234556889999976666556778888876
Q ss_pred CCCe
Q psy9327 279 DHGI 282 (641)
Q Consensus 279 ~~g~ 282 (641)
+ |.
T Consensus 241 ~-G~ 243 (306)
T 2p4o_A 241 D-RS 243 (306)
T ss_dssp T-CC
T ss_pred C-CC
Confidence 5 44
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.50 E-value=0.047 Score=55.76 Aligned_cols=144 Identities=8% Similarity=-0.026 Sum_probs=89.8
Q ss_pred eEEEEeCCCcEEEEECccCcc-cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCC
Q psy9327 23 WILSSLHNGVIQLWDYRMNTL-LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~-l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg 101 (641)
+|+.+. ...|+..|+..... ....-.....+.+++|++.+..|..+. ...+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D---------------------------~~~~ 57 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD---------------------------VSEE 57 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEE---------------------------TTTT
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEE---------------------------CCCC
Confidence 444443 46799999876531 111112234567899998666555554 2788
Q ss_pred eEEEEECCCCee-EEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 102 KIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 102 ~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
.|+.++...+.. ...+........++++.+. +.++++-...+.|.+++.........+.........++++|.+..|+
T Consensus 58 ~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly 137 (318)
T 3sov_A 58 AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY 137 (318)
T ss_dssp EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEE
Confidence 999999876632 1222223345678999974 55556666778999999875443333334556788999999765555
Q ss_pred EEeC--CCeEEEEecCC
Q psy9327 180 SASL--DQTIRVWDISG 194 (641)
Q Consensus 180 Sgs~--DgtI~IWD~~~ 194 (641)
.+.. .+.|...+...
T Consensus 138 ~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 138 WTDWGEVPKIERAGMDG 154 (318)
T ss_dssp EEECSSSCEEEEEETTS
T ss_pred EEecCCCCEEEEEEcCC
Confidence 4442 45666666553
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.48 E-value=0.0024 Score=71.16 Aligned_cols=159 Identities=11% Similarity=-0.011 Sum_probs=107.0
Q ss_pred EEEEccCCCeEEEEeCC----------------CcEEEEECccCcccccccc--cc--------cCeEEEEEeCCCC---
Q psy9327 14 GLSFHPKRPWILSSLHN----------------GVIQLWDYRMNTLLEKFDE--HE--------GPVRGICFHNQQP--- 64 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~d----------------g~I~iWD~~~~~~l~~~~~--h~--------~~V~~i~fsp~~~--- 64 (641)
.+++.++...++.+..+ +.|..+|..+|+.+.+++. |+ .++. +...++|.
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 36777777777766532 3599999999998877753 21 2222 22224553
Q ss_pred EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------------CCe-------
Q psy9327 65 IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------------DYI------- 124 (641)
Q Consensus 65 ~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------------~~V------- 124 (641)
.++.++ .+|.+.++|..+|+.+..+.-.. .++
T Consensus 318 ~v~~~~----------------------------~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 369 (571)
T 2ad6_A 318 LLSHID----------------------------RNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT 369 (571)
T ss_dssp EEEEEC----------------------------TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred EEEEeC----------------------------CCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence 455555 89999999999999887764221 111
Q ss_pred -------------------EEEEEccCCCEEEEEe-------------------------------------CCCeEEEE
Q psy9327 125 -------------------RTTFFHHEYPWILSAS-------------------------------------DDQTIRIW 148 (641)
Q Consensus 125 -------------------~~v~fsp~~~~l~sgs-------------------------------------~Dg~I~vW 148 (641)
..++++|+..+++..+ .++.+..|
T Consensus 370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~ 449 (571)
T 2ad6_A 370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAF 449 (571)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEE
T ss_pred CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEE
Confidence 2357888777666553 35789999
Q ss_pred ECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 149 d~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|..+++.+.++... ..+.+..+...+..++.++.|+.++.||.++++.+-.+.
T Consensus 450 D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 450 DLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 99999887776522 233333333456788889999999999999988776554
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.46 E-value=0.0037 Score=63.86 Aligned_cols=173 Identities=10% Similarity=0.099 Sum_probs=112.0
Q ss_pred ccCCCCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcccc-cccc----c--ccCeEEEEE---eCCCCEEEEeceeeE
Q psy9327 6 ETKSARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLE-KFDE----H--EGPVRGICF---HNQQPIFVSGGKMIV 74 (641)
Q Consensus 6 ~~H~~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~-~~~~----h--~~~V~~i~f---sp~~~~l~sgs~~~~ 74 (641)
++..---.+.+|++.+..+..++ ..|+|..||...+.... .+.. . ...+.+|.| .|+++++++.....
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~- 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK- 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT-
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc-
Confidence 33344455789998666666555 79999999987553322 3322 1 124689999 68877777542000
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECC---CCeeEEEEc--cC-----------CCCeEEEEEccCCCEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK---QRKCIFTLL--GH-----------LDYIRTTFFHHEYPWILS 138 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---t~~~~~~~~--~h-----------~~~V~~v~fsp~~~~l~s 138 (641)
........ -+.+..+..+|+. +++.+.... .. .....+++..++|+..++
T Consensus 88 ----------af~~~g~~----~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 88 ----------SFNFADQS----SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp ----------TTCTTSCC----SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred ----------cccccccc----cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 00000000 0136789999999 887766554 11 124789999999999999
Q ss_pred EeCC-CeEEEEECCCCeeEEEEc--c----CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 139 ASDD-QTIRIWYWQSRNCICVLT--G----HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 139 gs~D-g~I~vWd~~~~~~i~~l~--~----h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
++.- +.|...+.... .+..+. . .....+.++++|+|..|+....++.+..+|+..
T Consensus 154 ~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 154 FALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 9888 88888776543 233221 1 112356899999999888887799999999883
No 280
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.45 E-value=0.0042 Score=60.78 Aligned_cols=131 Identities=10% Similarity=0.019 Sum_probs=95.2
Q ss_pred CCeEE-EEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeC
Q psy9327 21 RPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD 99 (641)
Q Consensus 21 g~~La-sg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 99 (641)
++.|. ....++.+.+||..+.+.+.++..... +..+.+++..|+++. .
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~---Gwglt~dg~~L~vSd----------------------------g 122 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE---GWALTSDDSHLYMSD----------------------------G 122 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC---CCEEEECSSCEEEEC----------------------------S
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC---ceEEeeCCCEEEEEC----------------------------C
Confidence 44444 445689999999999999988864332 334446777777776 5
Q ss_pred CCeEEEEECCCCeeEEEEccCC-----CCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccC------------
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHL-----DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH------------ 162 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~-----~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h------------ 162 (641)
+++|.++|..+.+.+.++.-.. ..+..+.+. +|..++..-.+..|.+.|.++++.+..+.-.
T Consensus 123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~ 201 (243)
T 3mbr_X 123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDS 201 (243)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT
T ss_pred CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCC
Confidence 8899999999999888876432 345667766 5665655556889999999999988887511
Q ss_pred -CCCEEEEEEecCCCEEEEEeC
Q psy9327 163 -NHYVMCAQFHPTDDIVVSASL 183 (641)
Q Consensus 163 -~~~V~sl~fsp~g~~lvSgs~ 183 (641)
.+..+.++++|+++.|+..+.
T Consensus 202 ~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 202 TNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TSSCEEEEEEETTTTEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEECC
Confidence 135689999998877766664
No 281
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.44 E-value=0.004 Score=63.47 Aligned_cols=154 Identities=8% Similarity=-0.043 Sum_probs=101.1
Q ss_pred CCeEEEEEcc-CCCeEEEEeC-----------------CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEece
Q psy9327 10 ARVKGLSFHP-KRPWILSSLH-----------------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71 (641)
Q Consensus 10 ~~V~~l~fsp-dg~~Lasg~~-----------------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~ 71 (641)
.....+++.| +|.+.++-.. +|.|..||..+++.. .+........+|+|+|++..+..+.
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyv~d- 203 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT-LLLKELHVPGGAEVSADSSFVLVAE- 203 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE-EEEEEESCCCEEEECTTSSEEEEEE-
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE-EeccCCccCcceEECCCCCEEEEEe-
Confidence 3578899999 9986665432 367888887666432 2222223456899999998776664
Q ss_pred eeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe--eEEEEccCCCCeEEEEEccCCCEEEEEeC--------
Q psy9327 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK--CIFTLLGHLDYIRTTFFHHEYPWILSASD-------- 141 (641)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~--~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-------- 141 (641)
+.++.|.++|+.... ....+....+ ...+++.++|.++++...
T Consensus 204 --------------------------~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 204 --------------------------FLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp --------------------------GGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred --------------------------CCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccC
Confidence 267899999987421 1112211223 788999999997777654
Q ss_pred --CCeEEEEECCCCeeEEEEccC----CCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 142 --DQTIRIWYWQSRNCICVLTGH----NHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 142 --Dg~I~vWd~~~~~~i~~l~~h----~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.+.|..+|.. ++.+..+... ...++++++ .++.+.++...++.|.++++..
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4678888864 6666666533 235667776 4666666666788999998764
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.055 Score=58.57 Aligned_cols=156 Identities=11% Similarity=0.081 Sum_probs=96.4
Q ss_pred CeEEEEEccC-C-CeEEEEeCCCcEEEEECccCcccccccc---cccCeEEEEE-------eCCCCEEEEeceeeEEeee
Q psy9327 11 RVKGLSFHPK-R-PWILSSLHNGVIQLWDYRMNTLLEKFDE---HEGPVRGICF-------HNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 11 ~V~~l~fspd-g-~~Lasg~~dg~I~iWD~~~~~~l~~~~~---h~~~V~~i~f-------sp~~~~l~sgs~~~~~~~~ 78 (641)
....|+|+|. + +++++....+.|++.|...+........ .......|+| ++++..++++..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~------- 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID------- 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC-------
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC-------
Confidence 4679999983 4 4444444457799999877654332222 2235799999 999997766651
Q ss_pred ceeeecccCCcceeeEEEeeCC------CeEEEEECCC-CeeE-----EEEccCCCCeEEEEEcc-CCCEEEEEeCCCeE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDD------YKIKVWNYKQ-RKCI-----FTLLGHLDYIRTTFFHH-EYPWILSASDDQTI 145 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~D------g~I~vWD~~t-~~~~-----~~~~~h~~~V~~v~fsp-~~~~l~sgs~Dg~I 145 (641)
.+ ..|.+.+... +... ..+... ....+++++| ++.++++-..++.|
T Consensus 213 --------------------~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 213 --------------------YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp --------------------CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEE
T ss_pred --------------------CCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEE
Confidence 22 1355665333 1211 122211 1334678899 55666777788899
Q ss_pred EEEECC-------CCee-----------EEE-E-ccCCCCEEEEEEecCCCE-EEEEeCCCeEEEEecCC
Q psy9327 146 RIWYWQ-------SRNC-----------ICV-L-TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISG 194 (641)
Q Consensus 146 ~vWd~~-------~~~~-----------i~~-l-~~h~~~V~sl~fsp~g~~-lvSgs~DgtI~IWD~~~ 194 (641)
..+|+. ++.. ... + .+.......++|+|+|+. .++=+....|+.+|...
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 999987 5543 112 1 122345679999999995 45555678899977643
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.43 E-value=0.0077 Score=68.15 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=72.0
Q ss_pred EEEEcc-CCCeEEEEeCCC-----------cEEEEECccCcccc--ccc-ccccCeEEEEEeCCCCEEEEeceeeEEeee
Q psy9327 14 GLSFHP-KRPWILSSLHNG-----------VIQLWDYRMNTLLE--KFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 14 ~l~fsp-dg~~Lasg~~dg-----------~I~iWD~~~~~~l~--~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~ 78 (641)
+.++.| ++++++.|+.++ .+.+||..+++-.. .+. .+.....++++.+++.+++.||.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~------- 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN------- 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS-------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC-------
Confidence 567777 888888887643 58899988775322 121 13334456788899999999982
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCC-CeEEEEEccCCCEEEEEe-CC-----CeEEEEECC
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLD-YIRTTFFHHEYPWILSAS-DD-----QTIRIWYWQ 151 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~-~V~~v~fsp~~~~l~sgs-~D-----g~I~vWd~~ 151 (641)
.+..+.+||..+++....-..+.. .-.+++..+++++++.|+ .+ ..+.+||..
T Consensus 263 --------------------~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 263 --------------------DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp --------------------STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred --------------------CCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 445788888777654332111111 112445566777777777 34 467788877
Q ss_pred CCe
Q psy9327 152 SRN 154 (641)
Q Consensus 152 ~~~ 154 (641)
+.+
T Consensus 323 t~~ 325 (656)
T 1k3i_A 323 SKT 325 (656)
T ss_dssp TTE
T ss_pred CCc
Confidence 654
No 284
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.41 E-value=0.013 Score=57.86 Aligned_cols=212 Identities=12% Similarity=0.085 Sum_probs=123.6
Q ss_pred ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEcc-CCCCeEEE
Q psy9327 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG-HLDYIRTT 127 (641)
Q Consensus 49 ~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~-h~~~V~~v 127 (641)
+-...+.+++|+|++..|.+... .++.|...|.. ++.+.++.- -....-++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d---------------------------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGI 75 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTIN---------------------------KPAAIVEMTTN-GDLIRTIPLDFVKDLETI 75 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEE---------------------------TTEEEEEEETT-CCEEEEEECSSCSSEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEEC---------------------------CCCeEEEEeCC-CCEEEEEecCCCCChHHe
Confidence 33457999999998765555431 78899999998 888777632 22457789
Q ss_pred EEccCCCEEEEEeCCCeEEEEECCCCee---EEEEc------cCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCcee
Q psy9327 128 FFHHEYPWILSASDDQTIRIWYWQSRNC---ICVLT------GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 128 ~fsp~~~~l~sgs~Dg~I~vWd~~~~~~---i~~l~------~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~ 198 (641)
++.+++.++++.-.++.+.++++..... +.... ..+.....++|+|++..|+++.......+|.++..
T Consensus 76 a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~--- 152 (255)
T 3qqz_A 76 EYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGL--- 152 (255)
T ss_dssp EECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEEST---
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccc---
Confidence 9999887767766778899998765442 22221 13445689999999988887777666666666520
Q ss_pred eeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEecCCCcceeeecCCcceEEEEEcCCccEEE-EecCCeEEEEEc
Q psy9327 199 NVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIY-TTSNHIKYAIVN 277 (641)
Q Consensus 199 ~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d~~~~~~~~~~~~~~I~sla~~p~g~~L~-t~s~~~k~~l~~ 277 (641)
..+..-.+. ..+. ++... ....+.+++++|....++ .......+..++
T Consensus 153 --~~~~~l~i~----~~~~------------------~~~~~-------~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d 201 (255)
T 3qqz_A 153 --LSSNELHIS----KDKA------------------LQRQF-------TLDDVSGAEFNQQKNTLLVLSHESRALQEVT 201 (255)
T ss_dssp --TCSSCCEEE----ECHH------------------HHHTC-------CSSCCCEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred --ccCCceeee----cchh------------------hcccc-------ccCCceeEEEcCCCCeEEEEECCCCeEEEEc
Confidence 000000000 0000 00000 123457789998754444 444566677777
Q ss_pred CCCCeEeccccceEE--E--EEcCcEEEEEeCCCCeEEEEeCCcchhhh
Q psy9327 278 GDHGIIRTLDLPIYI--T--KIKGNQVYYLDRECSPHVLRIDPTEFKFK 322 (641)
Q Consensus 278 ~~~g~I~~~d~p~~~--~--~~~g~~v~~~~~dg~i~v~~~~~~~~~~k 322 (641)
.+...+..+.++-.. . ...+.-=++.+.+|++++.+=.+..|+|+
T Consensus 202 ~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 202 LVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp TTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred CCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 665555555443100 0 00111225666777766665555555553
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.38 E-value=0.0046 Score=71.22 Aligned_cols=117 Identities=8% Similarity=0.063 Sum_probs=78.4
Q ss_pred CeEEEEEe-CCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC-eeEE-EEccCCCCeEEEEE
Q psy9327 53 PVRGICFH-NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIF-TLLGHLDYIRTTFF 129 (641)
Q Consensus 53 ~V~~i~fs-p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~-~~~~-~~~~h~~~V~~v~f 129 (641)
.+...+|| |||++++-+.+. .++...+|+++|+.++ +.+. .+. .....++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-----------------------~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~W 228 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-----------------------SGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVW 228 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-----------------------SSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-----------------------CCCceEEEEEEECCCCCEeCCcccc---CceeeEEE
Confidence 67889999 999988866410 0012346999999998 6321 111 11346789
Q ss_pred ccCCCEEEEEeCC-----CeEEEEECCCCee--EEEEc-cCCCCEEEEEEecCCCEEEEEeC---CCeEEEEecCCC
Q psy9327 130 HHEYPWILSASDD-----QTIRIWYWQSRNC--ICVLT-GHNHYVMCAQFHPTDDIVVSASL---DQTIRVWDISGL 195 (641)
Q Consensus 130 sp~~~~l~sgs~D-----g~I~vWd~~~~~~--i~~l~-~h~~~V~sl~fsp~g~~lvSgs~---DgtI~IWD~~~~ 195 (641)
+||++.|+....| ..|+.+++.++.. ...+. .+......+.|+|||++|+..+. ...|.++|+.++
T Consensus 229 spDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 229 GPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9999888776655 3688899887642 22332 23345678899999998776553 346888898775
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.27 E-value=0.0039 Score=69.53 Aligned_cols=159 Identities=8% Similarity=-0.017 Sum_probs=104.9
Q ss_pred EEEEccCCCeEEEEeC--------------------C----CcEEEEECccCcccccccc--cc--------cCeEEEEE
Q psy9327 14 GLSFHPKRPWILSSLH--------------------N----GVIQLWDYRMNTLLEKFDE--HE--------GPVRGICF 59 (641)
Q Consensus 14 ~l~fspdg~~Lasg~~--------------------d----g~I~iWD~~~~~~l~~~~~--h~--------~~V~~i~f 59 (641)
..+++|+..+++.+.. | +.|..+|..+|+.+..++. |+ .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4678888787776663 2 6899999999998887753 32 1222 122
Q ss_pred e-CCCC---EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-------------C
Q psy9327 60 H-NQQP---IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-------------D 122 (641)
Q Consensus 60 s-p~~~---~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-------------~ 122 (641)
. .+|. .++.++ .+|.+.++|..+|+.+..+.... .
T Consensus 329 ~~~~G~~~~~v~~~~----------------------------~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~ 380 (582)
T 1flg_A 329 KAKDGKIVKATAHAD----------------------------RNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGR 380 (582)
T ss_dssp ECSSSCEEEEEEEEC----------------------------TTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCC
T ss_pred ecCCCCEEEEEEEEC----------------------------CCceEEEEECCCCCEecccccccCccccccccccCCC
Confidence 1 3453 555555 89999999999999887765331 0
Q ss_pred Ce--------------------------------EEEEEccCCCEEEEEe------------------------------
Q psy9327 123 YI--------------------------------RTTFFHHEYPWILSAS------------------------------ 140 (641)
Q Consensus 123 ~V--------------------------------~~v~fsp~~~~l~sgs------------------------------ 140 (641)
++ ..++++|+...+++..
T Consensus 381 p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~ 460 (582)
T 1flg_A 381 PVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRM 460 (582)
T ss_dssp EEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEES
T ss_pred EeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCC
Confidence 00 1345666554444332
Q ss_pred ---CCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 141 ---DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 141 ---~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
.++.|..||..+++.+.....+. ++..-.....+.+++.++.|+.++.||.++++.+-.+.
T Consensus 461 ~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 461 YDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 36889999999998876665322 22221122247788889999999999999988775554
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.27 E-value=0.26 Score=51.95 Aligned_cols=289 Identities=11% Similarity=0.097 Sum_probs=178.2
Q ss_pred EEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 15 l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.-.||..+.+|.=. ..+++|+|+++.+.+..+.- ..+|.--.|-.+..+-++
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~~l~lV-------------------------- 122 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALV-------------------------- 122 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETTEEEEE--------------------------
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCCeEEEE--------------------------
Confidence 45788888777665 67899999999887777643 446666777655544333
Q ss_pred EEeeCCCeEEEEECCC-CeeEEEEccCC----CCeEEEEEccCCCEEEEEeC-------CCeEEEEECCCCeeEEEEccC
Q psy9327 95 SVLGDDYKIKVWNYKQ-RKCIFTLLGHL----DYIRTTFFHHEYPWILSASD-------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t-~~~~~~~~~h~----~~V~~v~fsp~~~~l~sgs~-------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.+..|..|++.. ..+...|..|. ..|..-..+++++|++..|- .|.+.+|..+.+ .-+.+.||
T Consensus 123 ----T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 197 (494)
T 1bpo_A 123 ----TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 197 (494)
T ss_dssp ----CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCS
T ss_pred ----cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheee
Confidence 356899999974 46777777664 35777788899999875442 478889997644 45677888
Q ss_pred CCCEEEEEEecCC---CEEEEEeCC---CeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 163 NHYVMCAQFHPTD---DIVVSASLD---QTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 163 ~~~V~sl~fsp~g---~~lvSgs~D---gtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
.....++.+.-+. .++.-+... +.++|-++.....- .+...+.... +.++
T Consensus 198 aa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~--~~~f~kk~vd---------v~fp------------- 253 (494)
T 1bpo_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG--NQPFPKKAVD---------VFFP------------- 253 (494)
T ss_dssp EEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT--CCCCCCEEEE---------CCCC-------------
T ss_pred eeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC--CCCccceeee---------eeCC-------------
Confidence 6554333332111 233334432 57777777431000 0111000000 0000
Q ss_pred cCCCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCCeE
Q psy9327 237 NRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECSPH 310 (641)
Q Consensus 237 d~~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~i~ 310 (641)
. . ....-..++..++.-..++..+.-|-+.+++.++|+.- +-..+++.... ...-+++..+.|.+.
T Consensus 254 --p-----e-~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 254 --P-----E-AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp --T-----T-STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred --c-----c-cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 0 0 01333445677777677888888888999999888743 33445555443 356788899999999
Q ss_pred EEEeCCcchhhhHHHhccchHHHHHHHhcCcccc---chHHHHHHHHhcCCccchhhhhhh
Q psy9327 311 VLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVG---EVGERIKILKSCGQTSLAYLTAAT 368 (641)
Q Consensus 311 v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~---D~~~r~~~l~~~g~~~la~~~a~~ 368 (641)
...+|....+--..-...+.+-.+++....+|-| =..++.+.+...|++.-|-..|..
T Consensus 326 ~v~v~e~~ivpyi~~~l~n~~lA~~lA~R~~LpGAd~L~~~~F~~l~~~g~y~~AA~~aA~ 386 (494)
T 1bpo_A 326 SVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAAN 386 (494)
T ss_dssp EEEECTTTHHHHHHHTTCCHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred EEEEccccchhhhhhccCCHHHHHHHHHhcCCccHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 9999987776333322344455677777777766 344556667777777665554443
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.14 E-value=0.04 Score=56.27 Aligned_cols=164 Identities=10% Similarity=-0.026 Sum_probs=102.5
Q ss_pred CeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 11 RVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 11 ~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
...++++.+.+ .+.++-...+.|.+++.........+........++++.|.+..+..+..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~------------------ 141 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW------------------ 141 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEEC------------------
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEec------------------
Confidence 45678888744 44455556788999997643222222233445689999997665555530
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEE-EEEeCCCeEEEEECCCCeeEEEEccCCCCEEE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI-LSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l-~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~s 168 (641)
+..+.|...+.............-....++++++++..| ++-+..+.|..+|+..........+.......
T Consensus 142 --------~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~g 213 (318)
T 3sov_A 142 --------GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFA 213 (318)
T ss_dssp --------SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEE
T ss_pred --------CCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceE
Confidence 135788888876433222233334567899999965544 55556789999998743332223334556677
Q ss_pred EEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 169 l~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
+++. .+..+++-...+.|..+|..+++....+
T Consensus 214 lav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 214 LTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 7775 3456666667789999998776654444
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.11 E-value=0.18 Score=58.04 Aligned_cols=160 Identities=10% Similarity=-0.040 Sum_probs=104.5
Q ss_pred CCCeEEEEEccCCCeEE-EEeCCCcEEEEECccC----cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeee
Q psy9327 9 SARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83 (641)
Q Consensus 9 ~~~V~~l~fspdg~~La-sg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~ 83 (641)
...+.+|+|++.+..|+ +-...+.|+.+++... .....+........+|++.+.+..|..+.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD------------- 489 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD------------- 489 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-------------
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-------------
Confidence 35678999998555444 5555788988887642 22222222345567899998776666655
Q ss_pred cccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEECCCCeeEEEEcc
Q psy9327 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DD-QTIRIWYWQSRNCICVLTG 161 (641)
Q Consensus 84 ~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~D-g~I~vWd~~~~~~i~~l~~ 161 (641)
...+.|.+.++........+.......++|+++|.+.+|+.+. .+ ..|...++........+..
T Consensus 490 --------------~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 490 --------------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp --------------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred --------------cCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 3788999999885544333444556789999999765555443 33 7899988865444334444
Q ss_pred CCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCCC
Q psy9327 162 HNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISGL 195 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~~ 195 (641)
.......|++.+.+..|+.+. ....|...|+.+.
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 456789999998766665554 4567888887653
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.09 E-value=0.32 Score=49.50 Aligned_cols=258 Identities=10% Similarity=-0.007 Sum_probs=130.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc----cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF----DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~----~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
...+.++.|.+++..++ ++.+|.| +...+.|+.-... ......+.+|.|++ +..++++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g--------------- 96 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVG--------------- 96 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEE---------------
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEE---------------
Confidence 45799999988777777 4567765 3333444332222 12345789999987 4444444
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE-EEc
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC-VLT 160 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~-~l~ 160 (641)
.++.|.. ....| +.+.....+.+.+..+.+.+++..++++ .++.|.. ....++... ...
T Consensus 97 --------------~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 97 --------------EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQ 159 (327)
T ss_dssp --------------ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEEC
T ss_pred --------------CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeec
Confidence 4454433 22222 2221111233557788887777666555 4565432 122233222 233
Q ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEec--CCCceeeeccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEe
Q psy9327 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI--SGLRKKNVAPGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 161 ~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~--~~~~~~~~~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
++...+..+.+.|++.+++.+...+..+-+|- .+.+.... .....+..+.. ...+ ..+..++.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~-------~~~~~~G~~~~s 230 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRL-------WMIVNGGKIAFS 230 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCE-------EEEETTTEEEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCE-------EEEeCCceEEEe
Confidence 55667899999999888877655555555553 33333321 11122222111 1111 122234555555
Q ss_pred c-CCCcceeeec-----CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCC-eEeccc----c--ceEEE-EEcCcEEEE
Q psy9327 237 N-RKMEPLCNIH-----ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLD----L--PIYIT-KIKGNQVYY 302 (641)
Q Consensus 237 d-~~~~~~~~~~-----~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g-~I~~~d----~--p~~~~-~~~g~~v~~ 302 (641)
+ ..+..+..+. ....+.++++++++..++.+. ++.++.. .+.| +-..+. . .++.. ..++..++.
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~ 308 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALLCS-QDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFI 308 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEEEE-SSTTSSCEECGGGTTSSSCCCEEEEEETTEEEE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEEEe-CCCCcccEEcCccCCCCCCeEEEEEECCCceEE
Confidence 2 2233222222 124588899998877666655 4444333 2323 111111 1 12222 235677888
Q ss_pred EeCCCCeEEE
Q psy9327 303 LDRECSPHVL 312 (641)
Q Consensus 303 ~~~dg~i~v~ 312 (641)
...+|.+..+
T Consensus 309 ~G~~G~i~~~ 318 (327)
T 2xbg_A 309 LGQKGILLRY 318 (327)
T ss_dssp ECSTTEEEEE
T ss_pred EcCCceEEEE
Confidence 8888866554
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.03 E-value=0.26 Score=56.72 Aligned_cols=143 Identities=5% Similarity=-0.090 Sum_probs=90.6
Q ss_pred eEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCe
Q psy9327 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102 (641)
Q Consensus 23 ~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~ 102 (641)
+|+.+. ...|+..++....... +......+.+|+|++....|..+. ...+.
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD---------------------------~~~~~ 447 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSD---------------------------LSQRM 447 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEE-EECSCSSEEEEEEETTTTEEEEEE---------------------------TTTTE
T ss_pred cccccc-ccceeEeeccCCccee-eecCCCceEEEeecccCCeeEEee---------------------------cccee
Confidence 444443 3568888876554322 323445678999999666555554 26788
Q ss_pred EEEEECCCC----eeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCE
Q psy9327 103 IKVWNYKQR----KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177 (641)
Q Consensus 103 I~vWD~~t~----~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~ 177 (641)
|+.+++... .....+........++++.+.+. ++++-...+.|.+.++........+.........|+++|.+..
T Consensus 448 I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 448 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp EEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred EEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCC
Confidence 999998753 23334443556677899998764 5556667889999998765544344445567899999997655
Q ss_pred EEEEe-CC-CeEEEEecCC
Q psy9327 178 VVSAS-LD-QTIRVWDISG 194 (641)
Q Consensus 178 lvSgs-~D-gtI~IWD~~~ 194 (641)
|+.+. .+ +.|.+.++.+
T Consensus 528 LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp EEEEECSSSCEEEEEETTS
T ss_pred EEEecCCCCCeEEEEecCC
Confidence 55444 22 5677776654
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.00 E-value=0.075 Score=56.77 Aligned_cols=155 Identities=9% Similarity=0.029 Sum_probs=91.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCC---Cc-EEEEECccCccc--ccccccccCeEEEEEeC-CCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHN---GV-IQLWDYRMNTLL--EKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~d---g~-I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~ 80 (641)
......+++|+++|+++++...+ .. +...+. .+... ..+ .......+++++| ++.+.++-.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~-~~~~~~~~~~-~~~~~P~giavd~~~G~lyv~d~---------- 247 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR-ASGFTERLSL-CNARGAKTCAVHPQNGKIYYTRY---------- 247 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG-GGTTCCEEEE-EECSSBCCCEECTTTCCEEECBT----------
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC-CCCeeccccc-cccCCCCEEEEeCCCCeEEEEEC----------
Confidence 34568899999999944444321 12 322332 22111 111 1223456788999 666555544
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-cc-CCCCeEEEEEccCCC-EEEEEeCCCeEEEEECC--CCee
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LG-HLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQ--SRNC 155 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~-h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~--~~~~ 155 (641)
.++.|+.+|..++.....+ .. ....-..++|+|+++ ++++-...+.|+.+++. ++..
T Consensus 248 ------------------~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 248 ------------------HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp ------------------TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred ------------------CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 7789999999877652322 21 122335799999998 55566667899998865 2321
Q ss_pred --EEEEccC---------------CCCEEEEEE---------ecCCCEEEEEeCCCeEEEEec
Q psy9327 156 --ICVLTGH---------------NHYVMCAQF---------HPTDDIVVSASLDQTIRVWDI 192 (641)
Q Consensus 156 --i~~l~~h---------------~~~V~sl~f---------sp~g~~lvSgs~DgtI~IWD~ 192 (641)
...+.+. ......+++ .+++.+.++-+..+.|+.+|.
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 1122211 234667888 566677776666778888874
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.99 E-value=0.31 Score=54.54 Aligned_cols=164 Identities=9% Similarity=-0.026 Sum_probs=97.4
Q ss_pred CCeEEEEEccCCC-eEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 10 ARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 10 ~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
....++++++.+. +.++-..++.|.+.+.... ....+ ...-....+|++.|.+..|..+.-
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~---------------- 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDW---------------- 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEEC----------------
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEecc----------------
Confidence 5678999999555 4455556789999998644 32222 233345678999997665555530
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEE-EEeCCCeEEEEECCCCeeEEEEccCCCCE
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYV 166 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~-sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V 166 (641)
+..+.|...++.................++++++++..|. +-+..+.|...|+..........+.....
T Consensus 147 ----------g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P 216 (619)
T 3s94_A 147 ----------GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP 216 (619)
T ss_dssp ----------SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C
T ss_pred ----------CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc
Confidence 1346777777664333333333445678999998755554 44556789999886543322222122223
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
..+++..+ ...++-...+.|...|..+++....+
T Consensus 217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 217 FALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp CCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred eEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 45566543 45555556778999998777654443
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.75 E-value=0.6 Score=47.42 Aligned_cols=226 Identities=8% Similarity=-0.056 Sum_probs=117.4
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCccccccc---ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecc
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD---EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESR 85 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~---~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~ 85 (641)
...+.++.|+| +..++ ++.+|.|.. ..+.|+.-.... .+.+.+..+.+.+++..++++.
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------- 140 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN--------------- 140 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET---------------
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC---------------
Confidence 34688999987 44444 456675544 223344333222 2345678888887777666653
Q ss_pred cCCcceeeEEEeeCCCeE-EEEECCCCe-eEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEEC--CCCeeEEEEcc
Q psy9327 86 NEPCLFRIKSVLGDDYKI-KVWNYKQRK-CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW--QSRNCICVLTG 161 (641)
Q Consensus 86 ~~~~~~~~~~~~s~Dg~I-~vWD~~t~~-~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~--~~~~~i~~l~~ 161 (641)
++.| +-+| .|+ ......++...+..+++.+++.+++.+...+..+-+|- .+-+.+ -.+
T Consensus 141 --------------~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~ 202 (327)
T 2xbg_A 141 --------------VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRT 202 (327)
T ss_dssp --------------TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECC
T ss_pred --------------CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCC
Confidence 4433 2222 222 22223445667899999999887776654444444442 222332 134
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc-C---CCceeeecccCCCceeeeeeeeeeCCCeeEEEec
Q psy9327 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-G---MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 162 h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~-~---~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
....+..+.+.+++..+ .++.+|.+++++...++.-.... + .+..+.++....+ ..+..+..++.+..-.
T Consensus 203 ~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~g~~g~i~~S~ 276 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-----NEVWLAGGAGALLCSQ 276 (327)
T ss_dssp SSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-----SCEEEEESTTCEEEES
T ss_pred CCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-----CEEEEEeCCCeEEEeC
Confidence 55678899999988765 45567888877433222211111 0 1112222221111 0122222355554333
Q ss_pred CCCcceeeecC----CcceEEEEEcCCccEEEEecCCeEEEEEc
Q psy9327 238 RKMEPLCNIHE----NTRVKSGAWDESGVFIYTTSNHIKYAIVN 277 (641)
Q Consensus 238 ~~~~~~~~~~~----~~~I~sla~~p~g~~L~t~s~~~k~~l~~ 277 (641)
..+..+..+.. ...+.++.|++++. ++.++++|.+.-++
T Consensus 277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp STTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 34444444431 35677888876555 44444555555444
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.66 E-value=1.2 Score=49.78 Aligned_cols=146 Identities=9% Similarity=-0.031 Sum_probs=93.8
Q ss_pred CeEEEEeCCCcEEEEECccCccccccc-ccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~-~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
.+|+.+ ..+.|+..|+.+......+. ..-..+.+|+|++.+..+..+. ..+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD---------------------------~~~ 58 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTD---------------------------ISL 58 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEE---------------------------TTT
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEE---------------------------CCC
Confidence 355554 45679999987654322221 1234678999999777666665 278
Q ss_pred CeEEEEECCCCeeEEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
+.|+.+++........+........++++.+.+. +.++-...+.|.+.++........+.......+.++++|....|+
T Consensus 59 ~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 59 KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEE
Confidence 8999999876544444443345677899987655 555666678999999875443323334556688999999655555
Q ss_pred EEeC--CCeEEEEecCCC
Q psy9327 180 SASL--DQTIRVWDISGL 195 (641)
Q Consensus 180 Sgs~--DgtI~IWD~~~~ 195 (641)
.+.. .+.|...++...
T Consensus 139 ~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 139 WTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp EEECSSSCEEEEEETTSC
T ss_pred EeCCCCCCEEEEEeCCCC
Confidence 4442 456766666543
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.64 E-value=0.72 Score=47.44 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=82.3
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccc---cccccCeEEEEEeCC---CCEEEEeceeeEEeeecee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKF---DEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~---~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~ 81 (641)
..-.+++|.|+|.++ ++..+|.|.+++ .++. +..+ ........+|+|+|+ +..|.++..
T Consensus 31 ~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~---------- 97 (352)
T 2ism_A 31 EVPWALAFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT---------- 97 (352)
T ss_dssp SCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE----------
T ss_pred CCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe----------
Confidence 456799999999854 455679999998 3431 1111 122456789999998 555555531
Q ss_pred eecccCCcceeeEEEeeCC-----CeEEEEECCCC-----eeE-EEEc---cCCCCeEEEEEccCCCEEEEEeCC-----
Q psy9327 82 LESRNEPCLFRIKSVLGDD-----YKIKVWNYKQR-----KCI-FTLL---GHLDYIRTTFFHHEYPWILSASDD----- 142 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~D-----g~I~vWD~~t~-----~~~-~~~~---~h~~~V~~v~fsp~~~~l~sgs~D----- 142 (641)
.. ..|..|+...+ +.+ ..+. +.......++|.|+|.+.++.++.
T Consensus 98 -----------------~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 98 -----------------VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL 160 (352)
T ss_dssp -----------------ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGG
T ss_pred -----------------cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCcc
Confidence 11 56777776643 112 2233 111123689999999877765432
Q ss_pred --------CeEEEEECCC--------------CeeEEEEccCCCCEEEEEEec-CCCEEEEEeC
Q psy9327 143 --------QTIRIWYWQS--------------RNCICVLTGHNHYVMCAQFHP-TDDIVVSASL 183 (641)
Q Consensus 143 --------g~I~vWd~~~--------------~~~i~~l~~h~~~V~sl~fsp-~g~~lvSgs~ 183 (641)
++|.-+|... ...+.. .+|. ....++|+| ++.+.++-..
T Consensus 161 ~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~r-np~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-LGHR-NPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp GGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-ECCS-EECCCEECTTTCCEEEEEEC
T ss_pred ccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-EcCC-CcccEEEECCCCCEEEEEcC
Confidence 4666666542 011111 2332 356789999 6666555433
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.63 E-value=0.0074 Score=68.84 Aligned_cols=136 Identities=4% Similarity=-0.123 Sum_probs=78.6
Q ss_pred CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC
Q psy9327 30 NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109 (641)
Q Consensus 30 dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~ 109 (641)
.+.|+..++...+....... ...+.+++|++.+..|..+. ...+.|+.+++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD---------------------------~~~~~I~~~~~~ 436 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSD---------------------------LSQRMICSTQLD 436 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECC---------------------------TTTTSBEEEESC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEe---------------------------cCCCeEEEEecC
Confidence 35788888776654433332 34567899999877777765 267889999987
Q ss_pred C----CeeEEEEccCCCCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe-C
Q psy9327 110 Q----RKCIFTLLGHLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS-L 183 (641)
Q Consensus 110 t----~~~~~~~~~h~~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~ 183 (641)
. ......+........++++.+. +.++++-...+.|.+.+.........+.........++++|.+.+|+.+. .
T Consensus 437 g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 437 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp CCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS
T ss_pred CCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC
Confidence 5 2222222222234567888854 45555556678899999875543333333334567788888654443332 2
Q ss_pred C-CeEEEEecC
Q psy9327 184 D-QTIRVWDIS 193 (641)
Q Consensus 184 D-gtI~IWD~~ 193 (641)
. +.|.++++.
T Consensus 517 ~~~~I~~~~~d 527 (699)
T 1n7d_A 517 TPAKIKKGGLN 527 (699)
T ss_dssp SSCCEEBCCSS
T ss_pred CCCeEEEEeCC
Confidence 2 455555443
No 298
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.62 E-value=0.091 Score=56.03 Aligned_cols=115 Identities=7% Similarity=0.057 Sum_probs=73.5
Q ss_pred CCCCeEEEEEccCCCeEEEEeC-CC---cEEEEECccCccc--ccccccccCeEEEEEeC-CCCEEEEeceeeEEeeece
Q psy9327 8 KSARVKGLSFHPKRPWILSSLH-NG---VIQLWDYRMNTLL--EKFDEHEGPVRGICFHN-QQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~-dg---~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp-~~~~l~sgs~~~~~~~~~~ 80 (641)
......+++|+++|++|+.+.. ++ ...+|....+... ..+. ......+++++| ++.++++-.
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~---------- 245 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSW---------- 245 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEET----------
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEEC----------
Confidence 3456789999999996665554 22 1233333344332 2222 223457889999 666655554
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc-cCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECC
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQ 151 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~ 151 (641)
.++.|..+|..++.....+. +.....+.++|+|+++ ++++-...+.|..++..
T Consensus 246 ------------------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 246 ------------------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ------------------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ------------------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 67899999998776422222 1224568999999999 55566678899998765
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.61 E-value=0.012 Score=67.12 Aligned_cols=158 Identities=10% Similarity=-0.040 Sum_probs=94.4
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECcc----CcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRM----NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~----~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~ 84 (641)
..+.+++|++.+..|+.+. ..+.|+.+++.. ......+........+|++.+.+..|..+.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD-------------- 471 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-------------- 471 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECC--------------
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEe--------------
Confidence 3466889998776666554 468899999865 222222222223346788876544444443
Q ss_pred ccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe-CC-CeEEEEECCCCeeEEEEccC
Q psy9327 85 RNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS-DD-QTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 85 ~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs-~D-g~I~vWd~~~~~~i~~l~~h 162 (641)
...+.|.+.+.........+.......++++++|.+.+|+.+. .. +.|.+.++............
T Consensus 472 -------------~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~ 538 (699)
T 1n7d_A 472 -------------SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 538 (699)
T ss_dssp -------------TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS
T ss_pred -------------ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC
Confidence 2678899999875543333333345567899999655444333 23 67888776533221122223
Q ss_pred CCCEEEEEEecCCC-EEEEEeCCCeEEEEecCC
Q psy9327 163 NHYVMCAQFHPTDD-IVVSASLDQTIRVWDISG 194 (641)
Q Consensus 163 ~~~V~sl~fsp~g~-~lvSgs~DgtI~IWD~~~ 194 (641)
......|+|+|++. +.++-+..+.|.++|+.+
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 34567899998754 555555677898888865
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.51 E-value=0.89 Score=50.76 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=86.9
Q ss_pred CeEEEEeCCCcEEEEECccCc-ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCC
Q psy9327 22 PWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~-~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~D 100 (641)
++|+-+. ...|+..|+.... ........-..+.+++|++.+..+..+. ...
T Consensus 10 ~~~~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD---------------------------~~~ 61 (619)
T 3s94_A 10 PLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSD---------------------------VSE 61 (619)
T ss_dssp CCEEEEC-SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEE---------------------------TTT
T ss_pred ceEEEec-cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEE---------------------------CCC
Confidence 4444443 4678888887543 1222223345678999999777777665 267
Q ss_pred CeEEEEECCCCee-EEEEccCCCCeEEEEEccCCC-EEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEE
Q psy9327 101 YKIKVWNYKQRKC-IFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178 (641)
Q Consensus 101 g~I~vWD~~t~~~-~~~~~~h~~~V~~v~fsp~~~-~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~l 178 (641)
+.|+.+++..... ...+........++++.+.+. ++++-...+.|.+.+.........+.........++++|.+..|
T Consensus 62 ~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~l 141 (619)
T 3s94_A 62 EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 141 (619)
T ss_dssp TEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEE
T ss_pred CeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeE
Confidence 8999999876532 333444446788999999544 55666678899999987654333333455667889999975555
Q ss_pred EEEeC--CCeEEEEecCC
Q psy9327 179 VSASL--DQTIRVWDISG 194 (641)
Q Consensus 179 vSgs~--DgtI~IWD~~~ 194 (641)
+.+.. .+.|...++.+
T Consensus 142 y~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 142 YWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp EEEECSSSCEEEEEETTS
T ss_pred EEeccCCCCEEEEEECCC
Confidence 44432 34555555543
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.45 E-value=0.2 Score=51.43 Aligned_cols=154 Identities=12% Similarity=0.143 Sum_probs=101.1
Q ss_pred CCeEEEEEccCC----C---eEEEEe-C--CCcEEEEECc--cCcccccccc------cc-cCeEEEEE--eCC-CC-EE
Q psy9327 10 ARVKGLSFHPKR----P---WILSSL-H--NGVIQLWDYR--MNTLLEKFDE------HE-GPVRGICF--HNQ-QP-IF 66 (641)
Q Consensus 10 ~~V~~l~fspdg----~---~Lasg~-~--dg~I~iWD~~--~~~~l~~~~~------h~-~~V~~i~f--sp~-~~-~l 66 (641)
++++.+..-|+- . +++++. . +++|.+|++. +++ +..+.. .. ..+.++++ +|. +. ++
T Consensus 68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~ya 146 (355)
T 3amr_A 68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYA 146 (355)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEE
T ss_pred CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEE
Confidence 567777777632 1 233333 3 5789999773 343 443311 11 45677888 664 44 45
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECC-------CCeeEEEEccCCCCeEEEEEccCCCEEEEE
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK-------QRKCIFTLLGHLDYIRTTFFHHEYPWILSA 139 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~-------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sg 139 (641)
++.. .+|.+..|++. +.+.+++|.. .+.+..|...+....|+.+
T Consensus 147 fV~~----------------------------k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 147 MVTG----------------------------KEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp EEEC----------------------------SSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred EEEC----------------------------CCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence 5555 78999999882 3466777764 4578899999988899999
Q ss_pred eCCCeEEEEECC-----CCeeEEEEc-cCC-CCEEEEEEe--cCCC-EEEEEe-CCCeEEEEecC
Q psy9327 140 SDDQTIRIWYWQ-----SRNCICVLT-GHN-HYVMCAQFH--PTDD-IVVSAS-LDQTIRVWDIS 193 (641)
Q Consensus 140 s~Dg~I~vWd~~-----~~~~i~~l~-~h~-~~V~sl~fs--p~g~-~lvSgs-~DgtI~IWD~~ 193 (641)
-.|..|..++.+ +++.+..+. +|. ..+..+++- +++. +|+++| .+.+..+||.+
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999877777754 355665552 332 368888874 5555 555555 67899999996
No 302
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.33 E-value=0.2 Score=56.33 Aligned_cols=97 Identities=7% Similarity=-0.011 Sum_probs=64.4
Q ss_pred eEEEEECCCCee--EEEEc-cCCCCeEEEEEccCCCEEEEEe-CCCeEEEEECCCCeeEEEEccCCCC-EEEEEEecCCC
Q psy9327 102 KIKVWNYKQRKC--IFTLL-GHLDYIRTTFFHHEYPWILSAS-DDQTIRIWYWQSRNCICVLTGHNHY-VMCAQFHPTDD 176 (641)
Q Consensus 102 ~I~vWD~~t~~~--~~~~~-~h~~~V~~v~fsp~~~~l~sgs-~Dg~I~vWd~~~~~~i~~l~~h~~~-V~sl~fsp~g~ 176 (641)
.+.+||..+++. +..+. .+.....++++..++.+++.|+ .+..+.+||..+.+....-.-+... -.+++..+++.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 588999988753 22332 2333445678889999999998 4568999999877543221111111 13456667899
Q ss_pred EEEEEe-CC-----CeEEEEecCCCcee
Q psy9327 177 IVVSAS-LD-----QTIRVWDISGLRKK 198 (641)
Q Consensus 177 ~lvSgs-~D-----gtI~IWD~~~~~~~ 198 (641)
+++.|+ .+ ..+.+||..+.+-.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEEEeCcccCCcccccceEeCCCCCcce
Confidence 999988 44 57999999876543
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.31 E-value=0.25 Score=51.91 Aligned_cols=141 Identities=14% Similarity=0.123 Sum_probs=88.8
Q ss_pred cCCCeEEEEeCCCcEEEEECccCccccccccc----ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMNTLLEKFDEH----EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h----~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
.+|.-++.+- ++.||.-++..+...+.+... ...|..+..+|+|.+++..+
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g------------------------ 84 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN------------------------ 84 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC------------------------
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec------------------------
Confidence 3455455443 467777777644333333222 23578899999999999986
Q ss_pred EEeeCCCeEEEEECCCCe------------eEEEEcc------CCCCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCC
Q psy9327 95 SVLGDDYKIKVWNYKQRK------------CIFTLLG------HLDYIRTTFFHH---EYPWILSASDDQTIRIWYWQSR 153 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~------------~~~~~~~------h~~~V~~v~fsp---~~~~l~sgs~Dg~I~vWd~~~~ 153 (641)
+..|.|-.+..+. ..+.+.- ...+|..+.||| .+..|++-..|++|++||+...
T Consensus 85 -----~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 85 -----DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp -----SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred -----CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 4455555544211 0112211 357899999999 4568999999999999999752
Q ss_pred --eeEEEEc---------cCCCCEEEEEEecCCCEEEEEe--CCCeEEEE
Q psy9327 154 --NCICVLT---------GHNHYVMCAQFHPTDDIVVSAS--LDQTIRVW 190 (641)
Q Consensus 154 --~~i~~l~---------~h~~~V~sl~fsp~g~~lvSgs--~DgtI~IW 190 (641)
++. .++ .+...|.+++|.+++-.|...+ .+|-|.-.
T Consensus 160 ~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 160 QEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 222 332 2335688999998776555544 66766544
No 304
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.18 E-value=0.45 Score=57.24 Aligned_cols=285 Identities=11% Similarity=0.095 Sum_probs=170.7
Q ss_pred EEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEE
Q psy9327 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95 (641)
Q Consensus 16 ~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (641)
-.||..+.+|.-. ..+++|+|+++...+..+.- ..+|.--.|-....+-+++
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT-------------------------- 123 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-------------------------- 123 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc--------------------------
Confidence 3677777666554 57899999988877776643 4567667776555443333
Q ss_pred EeeCCCeEEEEECCC-CeeEEEEccC----CCCeEEEEEccCCCEEEEEe-------CCCeEEEEECCCCeeEEEEccCC
Q psy9327 96 VLGDDYKIKVWNYKQ-RKCIFTLLGH----LDYIRTTFFHHEYPWILSAS-------DDQTIRIWYWQSRNCICVLTGHN 163 (641)
Q Consensus 96 ~~s~Dg~I~vWD~~t-~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs-------~Dg~I~vWd~~~~~~i~~l~~h~ 163 (641)
+..|..|++.. ..+...|..| ...|..-..+++++|++..| -.|.+.+|....+ ..+.+.||.
T Consensus 124 ----~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha 198 (1630)
T 1xi4_A 124 ----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 198 (1630)
T ss_pred ----CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhH
Confidence 56799999964 3565666655 34677778889999987544 3578889987644 344566776
Q ss_pred CCEEEEEEe--cCCC-EEEEEeC---CCeEEEEecCCC-ceeeeccCCCceeeecccCCCceeeeeeeeeeCCCeeEEEe
Q psy9327 164 HYVMCAQFH--PTDD-IVVSASL---DQTIRVWDISGL-RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236 (641)
Q Consensus 164 ~~V~sl~fs--p~g~-~lvSgs~---DgtI~IWD~~~~-~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~~~d~~I~i~ 236 (641)
+...++... +... .+.-+.. .+.++|-++... ..- +++.+
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~---~~f~k------------------------------ 245 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN---QPFPK------------------------------ 245 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC---CCCcc------------------------------
Confidence 554333332 1112 2222222 256777776432 000 10000
Q ss_pred cCCCcceeeec--CCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEe----ccccceEEEEE--cCcEEEEEeCCCC
Q psy9327 237 NRKMEPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR----TLDLPIYITKI--KGNQVYYLDRECS 308 (641)
Q Consensus 237 d~~~~~~~~~~--~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~----~~d~p~~~~~~--~g~~v~~~~~dg~ 308 (641)
+...+..-+ ...-..++..++.-..++..+..|-+.+++.++|+.- +-..|++.... ...-+++..+.|.
T Consensus 246 --k~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~ 323 (1630)
T 1xi4_A 246 --KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 323 (1630)
T ss_pred --ccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCce
Confidence 000000000 1223334666666666777778888888888887643 33444554332 3456788889999
Q ss_pred eEEEEeCCcchhhhHHHhccchHHHHHHHhcCcccc---chHHHHHHHHhcCCccchhhhhhh
Q psy9327 309 PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVG---EVGERIKILKSCGQTSLAYLTAAT 368 (641)
Q Consensus 309 i~v~~~~~~~~~~k~~l~~~~~~~~l~~~~~s~l~~---D~~~r~~~l~~~g~~~la~~~a~~ 368 (641)
+....++....+--..-.-.+.+-.+.+....++-| =..++++.+...|++.-|-..|..
T Consensus 324 vl~v~v~~~~iv~yi~~~l~~~~la~~~a~r~~lpGad~l~~~~F~~l~~~g~y~~AA~~aa~ 386 (1630)
T 1xi4_A 324 VLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAAN 386 (1630)
T ss_pred EEEEEEccchhhhhHhhccCCHHHHHHHHHhcCCCCchhHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 999999987766333222244456677777777777 455667778888887766665544
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.15 E-value=0.47 Score=48.30 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=77.6
Q ss_pred eEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEE-Ecc----CCC--CeEE
Q psy9327 54 VRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT-LLG----HLD--YIRT 126 (641)
Q Consensus 54 V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~-~~~----h~~--~V~~ 126 (641)
-.+++|++.+..|..++ ...++|..||...+..... +.+ ..+ .+.+
T Consensus 15 PE~~~wd~~~g~~~vs~---------------------------l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sG 67 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSN---------------------------LYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSG 67 (334)
T ss_dssp CSCEEEETTTTEEEEEE---------------------------TTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEE
T ss_pred CcCccCcCCCCEEEEEe---------------------------ccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeE
Confidence 34688998666666665 3799999999986644333 322 111 3679
Q ss_pred EEE---ccCCCEEEEEe-------------CCCeEEEEECC---CCeeEEEEc--cC-----------CCCEEEEEEecC
Q psy9327 127 TFF---HHEYPWILSAS-------------DDQTIRIWYWQ---SRNCICVLT--GH-----------NHYVMCAQFHPT 174 (641)
Q Consensus 127 v~f---sp~~~~l~sgs-------------~Dg~I~vWd~~---~~~~i~~l~--~h-----------~~~V~sl~fsp~ 174 (641)
+.| .|++.++++.. .+..+..+|+. +++.+.... +. ......++..++
T Consensus 68 l~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~ 147 (334)
T 2p9w_A 68 LSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD 147 (334)
T ss_dssp EEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT
T ss_pred EEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC
Confidence 999 68877777543 26789999998 776554432 11 134788999999
Q ss_pred CCEEEEEeCC-CeEEEEecCC
Q psy9327 175 DDIVVSASLD-QTIRVWDISG 194 (641)
Q Consensus 175 g~~lvSgs~D-gtI~IWD~~~ 194 (641)
|+..++++.. +.|...|...
T Consensus 148 GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 148 GNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp SCEEEEEEESSCEEEEECTTS
T ss_pred CCEEEeCCCCCCeEEEEeCCC
Confidence 9999998877 7766555543
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.08 E-value=0.27 Score=51.73 Aligned_cols=95 Identities=20% Similarity=0.128 Sum_probs=67.8
Q ss_pred CCCeEEEEECCCCeeEEEEccC----CCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe------------eEEEEcc-
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN------------CICVLTG- 161 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h----~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~------------~i~~l~~- 161 (641)
.++.||.-++..+..-+.+... -+.|..+..+|+|.++|..+ +..|.|-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 5678888887754433444322 23578899999999888886 4578888776321 1223321
Q ss_pred -----CCCCEEEEEEecC---CCEEEEEeCCCeEEEEecCC
Q psy9327 162 -----HNHYVMCAQFHPT---DDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 162 -----h~~~V~sl~fsp~---g~~lvSgs~DgtI~IWD~~~ 194 (641)
...+|..+.|||- +..|++-..|++||+||+..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 3567999999994 57899999999999999986
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.02 E-value=0.31 Score=50.05 Aligned_cols=142 Identities=7% Similarity=0.120 Sum_probs=97.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCC----C---EEEEeceeeEEeeeceeeecccCCccee
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ----P---IFVSGGKMIVMAYQGCILESRNEPCLFR 92 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~----~---~l~sgs~~~~~~~~~~~~~~~~~~~~~~ 92 (641)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|+- . +++++.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~---------------------- 93 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASN---------------------- 93 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEE----------------------
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeC----------------------
Confidence 3456777777888999999 7888887743 678888887732 1 222322
Q ss_pred eEEEeeC--CCeEEEEEC--CCCeeEEEEcc------CC-CCeEEEEE--ccC-CC-EEEEEeCCCeEEEEECC------
Q psy9327 93 IKSVLGD--DYKIKVWNY--KQRKCIFTLLG------HL-DYIRTTFF--HHE-YP-WILSASDDQTIRIWYWQ------ 151 (641)
Q Consensus 93 ~~~~~s~--Dg~I~vWD~--~t~~~~~~~~~------h~-~~V~~v~f--sp~-~~-~l~sgs~Dg~I~vWd~~------ 151 (641)
-. +++|.+|++ .+++ +..+.. .. ..+.++|+ +|. +. +++....++.+..|++.
T Consensus 94 -----R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 94 -----RSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp -----CSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred -----CCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 24 689999976 4443 444421 11 45667777 664 44 67778888999999882
Q ss_pred -CCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecC
Q psy9327 152 -SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193 (641)
Q Consensus 152 -~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~ 193 (641)
+.+.+++|.- .+.+-.+...+....|+.+-+|.-|..+|..
T Consensus 168 ~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 168 ISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 3356677763 4578888899988999999998665555543
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.02 E-value=2.6 Score=46.97 Aligned_cols=157 Identities=10% Similarity=-0.010 Sum_probs=100.9
Q ss_pred CCeEEEEEccCCCeEEEEe-CCCcEEEEECccCcccccccc------cccCeEEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 10 ARVKGLSFHPKRPWILSSL-HNGVIQLWDYRMNTLLEKFDE------HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~-~dg~I~iWD~~~~~~l~~~~~------h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
..+.+++|++.+..|..+. ..+.|+.++.........+.. ....+.++++...+..|..+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td------------ 407 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTC------------ 407 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEE------------
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEc------------
Confidence 4578899999766666554 467898888654322222221 234688999998766655544
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-ccCCCCeEEEEEcc-CCCEEEEEeCCC--eEEEEECCCCeeEEE
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHH-EYPWILSASDDQ--TIRIWYWQSRNCICV 158 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-~~h~~~V~~v~fsp-~~~~l~sgs~Dg--~I~vWd~~~~~~i~~ 158 (641)
+..+.|.+.+.. |+...++ .......++++++| .+.++++-.... .|...++........
T Consensus 408 ---------------~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l 471 (628)
T 4a0p_A 408 ---------------EATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVL 471 (628)
T ss_dssp ---------------TTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEE
T ss_pred ---------------CCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEE
Confidence 277889999986 4444343 34556789999999 555555543333 576667653333222
Q ss_pred EccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISG 194 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~ 194 (641)
........+.+++.+++..|..+. ..+.|...|+.+
T Consensus 472 ~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG 508 (628)
T 4a0p_A 472 FFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG 508 (628)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 333455678999999877666554 457888888855
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.93 E-value=0.23 Score=53.72 Aligned_cols=158 Identities=14% Similarity=0.156 Sum_probs=98.0
Q ss_pred eEEEEEccC-CCeEEEEeCCCcEEEEECc-------cCcc-----------ccc-cc-ccccCeEEEEEeCCCCEEEEec
Q psy9327 12 VKGLSFHPK-RPWILSSLHNGVIQLWDYR-------MNTL-----------LEK-FD-EHEGPVRGICFHNQQPIFVSGG 70 (641)
Q Consensus 12 V~~l~fspd-g~~Lasg~~dg~I~iWD~~-------~~~~-----------l~~-~~-~h~~~V~~i~fsp~~~~l~sgs 70 (641)
..+++++|+ +.++++-..++.|..+|.. +++. ... +. .....-.+|+|+|++..|..+.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 457889995 5555566678889999987 4543 111 11 1223458999999999666654
Q ss_pred eeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEEC--CCCee--EEEEccC---C------------CCeE-EEEEc
Q psy9327 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNY--KQRKC--IFTLLGH---L------------DYIR-TTFFH 130 (641)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~--~t~~~--~~~~~~h---~------------~~V~-~v~fs 130 (641)
+..+.|+.+|+ .++.. ..++-+. . .... .++..
T Consensus 329 ---------------------------~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd 381 (496)
T 3kya_A 329 ---------------------------INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVK 381 (496)
T ss_dssp ---------------------------TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEE
T ss_pred ---------------------------CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEc
Confidence 26788888654 33332 1222221 1 1234 45554
Q ss_pred -------cCCCEEEEEeCCCeEEEEECCCCeeEEEEccC------------------------CCCEEEEEEecC-CCEE
Q psy9327 131 -------HEYPWILSASDDQTIRIWYWQSRNCICVLTGH------------------------NHYVMCAQFHPT-DDIV 178 (641)
Q Consensus 131 -------p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h------------------------~~~V~sl~fsp~-g~~l 178 (641)
+++.++++-.....|+.++ .++. +.++-|. ......+++.++ +.++
T Consensus 382 ~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ly 459 (496)
T 3kya_A 382 NPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFY 459 (496)
T ss_dssp CTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEE
T ss_pred cccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEE
Confidence 4566777777788999998 4553 4444322 124678899986 6666
Q ss_pred EEEeCCCeEEEEecCCCcee
Q psy9327 179 VSASLDQTIRVWDISGLRKK 198 (641)
Q Consensus 179 vSgs~DgtI~IWD~~~~~~~ 198 (641)
++=+....||.+++....+.
T Consensus 460 VaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 460 VHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEETTTTEEEEEEECCCC--
T ss_pred EEeCCCCEEEEEECCCCccc
Confidence 66666788998888764443
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.86 E-value=0.45 Score=49.15 Aligned_cols=156 Identities=14% Similarity=0.159 Sum_probs=96.4
Q ss_pred CeEEEEEccCCCeEEEEe------------CCCcEEEEECccCc-cccc-------ccccccCeEEEEEeC--CCC-EEE
Q psy9327 11 RVKGLSFHPKRPWILSSL------------HNGVIQLWDYRMNT-LLEK-------FDEHEGPVRGICFHN--QQP-IFV 67 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~------------~dg~I~iWD~~~~~-~l~~-------~~~h~~~V~~i~fsp--~~~-~l~ 67 (641)
..-.++..|+|..+++++ .+|.|.++|..+.. .... +........+|.+.+ ++. +|.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 345667788886555552 68999999987321 1112 222345788888877 343 444
Q ss_pred EeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----eeEEEEccC-CCCeEEEEEccCCCEEEEEeC-
Q psy9327 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----KCIFTLLGH-LDYIRTTFFHHEYPWILSASD- 141 (641)
Q Consensus 68 sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----~~~~~~~~h-~~~V~~v~fsp~~~~l~sgs~- 141 (641)
++.. ...+.+|.+|++..+ ..+.++.+. ....+++++.++|.+.++...
T Consensus 131 Vvnh-------------------------~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ 185 (355)
T 3sre_A 131 VVNH-------------------------PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY 185 (355)
T ss_dssp EEEC-------------------------STTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS
T ss_pred EEEC-------------------------CCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE
Confidence 4431 013578888877643 234445442 235789999999987777541
Q ss_pred ----------------CCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEe-CCCeEEEEecCC
Q psy9327 142 ----------------DQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSAS-LDQTIRVWDISG 194 (641)
Q Consensus 142 ----------------Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs-~DgtI~IWD~~~ 194 (641)
.+.|.-+|. +++. .+...-...+.++|+||++.++.+. ..+.|..||+..
T Consensus 186 ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 186 FIDPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp CSSHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred eCCcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 245555554 3322 2323345678999999998766554 578999999863
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.43 E-value=0.36 Score=49.89 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=81.0
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCc-ccccc---cccccCeEEEEEeCC---CCEEEEeceeeEEeeeceee
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKF---DEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~-~l~~~---~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~~~~~ 82 (641)
....+++|.|+|. |+++..+|.|+++| ..++ .+..+ ........+|+|+|+ +..|.++....
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~--------- 97 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF--------- 97 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE---------
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc---------
Confidence 4578999999998 55556679999997 4454 22211 122356889999997 55555543000
Q ss_pred ecccCCcceeeEEEeeCC----CeEEEEECCCC-------eeE-EEEcc-CCCCeEEEEEccCCCEEEEEeCC-------
Q psy9327 83 ESRNEPCLFRIKSVLGDD----YKIKVWNYKQR-------KCI-FTLLG-HLDYIRTTFFHHEYPWILSASDD------- 142 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~D----g~I~vWD~~t~-------~~~-~~~~~-h~~~V~~v~fsp~~~~l~sgs~D------- 142 (641)
..+ ..|..|+...+ +.+ ..+.. .......++|.|+|.+.++.++.
T Consensus 98 ---------------~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~ 162 (354)
T 3a9g_A 98 ---------------AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQ 162 (354)
T ss_dssp ---------------CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGT
T ss_pred ---------------CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCcccc
Confidence 012 45666665543 111 11221 11124679999999877775432
Q ss_pred ------CeEEEEECCCC---------eeEEEEccCCCCEEEEEEec-CCCEEEEE
Q psy9327 143 ------QTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHP-TDDIVVSA 181 (641)
Q Consensus 143 ------g~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp-~g~~lvSg 181 (641)
++|.-+|.... ..+.. .+|.. ...++|+| ++.+.++-
T Consensus 163 d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-~G~rn-p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 163 DLSSLAGKILRVDEEGRPPADNPFPNSPIWS-YGHRN-PQGIDWHRASGVMVATE 215 (354)
T ss_dssp CTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-ECCSC-CCEEEECTTTCCEEEEE
T ss_pred CCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-EccCC-cceEEEeCCCCCEEEEe
Confidence 45666655321 11221 23433 45789999 56655553
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.36 E-value=0.35 Score=46.23 Aligned_cols=139 Identities=12% Similarity=-0.046 Sum_probs=81.5
Q ss_pred CeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCe--------EEEEEeCCCCEEEEeceeeEEeeeceee
Q psy9327 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV--------RGICFHNQQPIFVSGGKMIVMAYQGCIL 82 (641)
Q Consensus 11 ~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V--------~~i~fsp~~~~l~sgs~~~~~~~~~~~~ 82 (641)
.++.++|||+|.+.++ .+|.+.--+..+.+...-+ +....| .++.|.|++.+.++ +
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~-~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~------------ 105 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM-GRAKKIGNGGWNQFQFLFFDPNGYLYAV-S------------ 105 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH-HHCEEEECSCGGGCSEEEECTTSCEEEE-E------------
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccc-ccccEecccccccceEEEECCCCCEEEe-C------------
Confidence 6779999999986666 6776555554332221111 112333 78999999998887 4
Q ss_pred ecccCCcceeeEEEeeCCCeEEEEECCCCee-------EEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCe-
Q psy9327 83 ESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC-------IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN- 154 (641)
Q Consensus 83 ~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~-------~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~- 154 (641)
||.|.-++-.+... ...-.+-=..+..+.|.|+|.+.+.. |+.++-+...+..
T Consensus 106 -----------------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~ 166 (236)
T 1tl2_A 106 -----------------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQ 166 (236)
T ss_dssp -----------------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTT
T ss_pred -----------------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCC
Confidence 48888777533111 11111112467899999999877666 7775443332211
Q ss_pred -----eEEEE-ccCCCCEEEEEEecCCCEEEEEeCCCe
Q psy9327 155 -----CICVL-TGHNHYVMCAQFHPTDDIVVSASLDQT 186 (641)
Q Consensus 155 -----~i~~l-~~h~~~V~sl~fsp~g~~lvSgs~Dgt 186 (641)
....+ .+.-+.-+.+.|.|++.+.+.. ++.
T Consensus 167 ~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 167 DNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp CCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred cccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 01111 1333345567788888776655 663
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.13 E-value=0.83 Score=46.97 Aligned_cols=146 Identities=15% Similarity=0.118 Sum_probs=83.7
Q ss_pred CCCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--ccc----ccccccCeEEEEEeCC---CCEEEEeceeeEEeee
Q psy9327 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEK----FDEHEGPVRGICFHNQ---QPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 8 H~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~----~~~h~~~V~~i~fsp~---~~~l~sgs~~~~~~~~ 78 (641)
.-..-.+|+|.|+|.++++--..|.|++++...++. +.. +....+...+|+|+|+ +.+|...-.
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt------- 102 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT------- 102 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE-------
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe-------
Confidence 345678999999999776665589999998655542 211 1233567899999995 444443210
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCC----------CeeEE-EEcc-CCCCeEEEEEccCCCEEEEEeC-----
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ----------RKCIF-TLLG-HLDYIRTTFFHHEYPWILSASD----- 141 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t----------~~~~~-~~~~-h~~~V~~v~fsp~~~~l~sgs~----- 141 (641)
...+..|.-|.+.. .+.+. .+.. ....-..++|.|+|.+.++.++
T Consensus 103 ------------------~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~ 164 (347)
T 3das_A 103 ------------------SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTG 164 (347)
T ss_dssp ------------------CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGG
T ss_pred ------------------cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCc
Confidence 00334555555543 12222 2221 1123457999999998887653
Q ss_pred --------CCeEEEEECCCC---------eeEEEEccCCCCEEEEEEecCCCEEEE
Q psy9327 142 --------DQTIRIWYWQSR---------NCICVLTGHNHYVMCAQFHPTDDIVVS 180 (641)
Q Consensus 142 --------Dg~I~vWd~~~~---------~~i~~l~~h~~~V~sl~fsp~g~~lvS 180 (641)
.++|.-.+.... ..+. -.||.. ...++|+|+|.+.++
T Consensus 165 ~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 165 LSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY-SYGHRN-VQGLAWDDKQRLFAS 218 (347)
T ss_dssp GTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE-EBCCSB-CCEEEECTTCCEEEE
T ss_pred cccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE-eeCCCC-cceEEECCCCCEEEE
Confidence 345554554322 1121 135543 457899998776554
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.07 E-value=0.38 Score=49.63 Aligned_cols=59 Identities=17% Similarity=0.279 Sum_probs=38.6
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc---cccc----cccccCeEEEEEeCC---CCEEEEe
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEKF----DEHEGPVRGICFHNQ---QPIFVSG 69 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~---l~~~----~~h~~~V~~i~fsp~---~~~l~sg 69 (641)
....+|+|.|+|+.++++...|.|++++.. ++. +..+ ....+...+|+|+|+ +.+|..+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456899999999844555668999999853 332 1111 122346789999996 5555544
No 315
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.04 E-value=0.96 Score=48.38 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=39.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcc--cccccc------cccCeEEEEEeCC---CCEEEEec
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDE------HEGPVRGICFHNQ---QPIFVSGG 70 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~--l~~~~~------h~~~V~~i~fsp~---~~~l~sgs 70 (641)
-....+|+|.|+|+++++-...+.|++++..+++. +..+.. ..+...+|+|+|+ +.+|..+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 34567999999998666654445788887654432 222221 2456789999996 55555543
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.52 E-value=2.8 Score=41.29 Aligned_cols=94 Identities=7% Similarity=-0.032 Sum_probs=51.3
Q ss_pred CeEEEEECCCCe---eEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEE--EEccCCCCEEE
Q psy9327 101 YKIKVWNYKQRK---CIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCIC--VLTGHNHYVMC 168 (641)
Q Consensus 101 g~I~vWD~~t~~---~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~--~l~~h~~~V~s 168 (641)
..+.+||..+++ .... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-.. .+......-.+
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 468899988765 3322 2211122222222 56677777654 368899988775332 22211111122
Q ss_pred EEEecCCCEEEEEeCC-----CeEEEEecCCCcee
Q psy9327 169 AQFHPTDDIVVSASLD-----QTIRVWDISGLRKK 198 (641)
Q Consensus 169 l~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~~ 198 (641)
+. .++.+++.|+.+ ..+.+||..+.+-.
T Consensus 156 ~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 156 VV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp EE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred EE--ECCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 22 267777777654 46888998776543
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.45 E-value=7.7 Score=39.65 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=63.0
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCe-eEEEEc---cCCCCeEEE
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK-CIFTLL---GHLDYIRTT 127 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~-~~~~~~---~h~~~V~~v 127 (641)
....+++|.|++.++++- .++.|+++| .+++ .+..+. .......++
T Consensus 29 ~~P~~ia~~pdG~l~V~e-----------------------------~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gi 78 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE-----------------------------RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGL 78 (354)
T ss_dssp SCEEEEEEEETTEEEEEE-----------------------------TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEE
T ss_pred CCCeEEEEcCCCeEEEEe-----------------------------CCCEEEEEe-CCCceEeeccceeecCCCceeeE
Confidence 345789999999866665 569999997 4555 222221 223568899
Q ss_pred EEccC---CCEE-EEEeC---C----CeEEEEECCCC-------eeE-EEEc-cCCCCEEEEEEecCCCEEEEEe
Q psy9327 128 FFHHE---YPWI-LSASD---D----QTIRIWYWQSR-------NCI-CVLT-GHNHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 128 ~fsp~---~~~l-~sgs~---D----g~I~vWd~~~~-------~~i-~~l~-~h~~~V~sl~fsp~g~~lvSgs 182 (641)
+|+|+ +..| ++-+. + ..|..|+.... +.+ ..+. +..+....+.|.|+|.+.++.+
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 99997 4444 44332 3 56777876654 112 1122 1223456799999998777754
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.30 E-value=6.8 Score=38.58 Aligned_cols=148 Identities=9% Similarity=-0.027 Sum_probs=76.2
Q ss_pred CCeEEEEeC--CCcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEE
Q psy9327 21 RPWILSSLH--NGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSV 96 (641)
Q Consensus 21 g~~Lasg~~--dg~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (641)
+.+++.|+. ...+.+||..+++- +..+......-..+. -++..++.||..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~------------------------ 65 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQ------------------------ 65 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBS------------------------
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCC------------------------
Confidence 345666765 35688899876542 211211111111122 255666676610
Q ss_pred eeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeCC------CeEEEEECCCCeeEEE--EccCCCCE
Q psy9327 97 LGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASDD------QTIRIWYWQSRNCICV--LTGHNHYV 166 (641)
Q Consensus 97 ~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~D------g~I~vWd~~~~~~i~~--l~~h~~~V 166 (641)
...-..+.+||..+++....-. ........+.+ ++.+++.|+.+ ..+.+||..+.+-... +......-
T Consensus 66 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 143 (306)
T 3ii7_A 66 LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH 143 (306)
T ss_dssp SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee
Confidence 0123578899998876543322 11112222222 66777777765 4689999988763322 11111111
Q ss_pred EEEEEecCCCEEEEEeC---------CCeEEEEecCCCcee
Q psy9327 167 MCAQFHPTDDIVVSASL---------DQTIRVWDISGLRKK 198 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~---------DgtI~IWD~~~~~~~ 198 (641)
.++. .++.+++.|+. -..+.+||..+.+-.
T Consensus 144 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 144 GMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred EEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 2222 25666666654 345888998876543
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.07 E-value=0.75 Score=47.48 Aligned_cols=120 Identities=11% Similarity=0.013 Sum_probs=76.4
Q ss_pred eeeccC-CCCeEEEEEccCCCeEEEEeC---C------------CcEEEEECccCcccccccccccCeEEEEEeCCCCEE
Q psy9327 3 TKFETK-SARVKGLSFHPKRPWILSSLH---N------------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66 (641)
Q Consensus 3 ~~~~~H-~~~V~~l~fspdg~~Lasg~~---d------------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l 66 (641)
.++++. -.+.+.+.+.++|.+.++... | ..=.+|-+..++ +......-..-++|+|+||++.+
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEEEESSEEEEEECTTSSEE
T ss_pred eccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeecCCcccCcceECCCCCEE
Confidence 344433 256889999999987776642 1 123344443342 33333334567999999999988
Q ss_pred EEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC-Cee--EEEEccCCCCeEEEEEcc-CCCEEEEEeCC
Q psy9327 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ-RKC--IFTLLGHLDYIRTTFFHH-EYPWILSASDD 142 (641)
Q Consensus 67 ~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t-~~~--~~~~~~h~~~V~~v~fsp-~~~~l~sgs~D 142 (641)
..+. +..+.|..||+.. ++. ...+ ...+..-.+++.+ +|.+.+++..+
T Consensus 236 Yvad---------------------------t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 236 YIAE---------------------------LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEE---------------------------GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEe---------------------------CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 8876 4678999999863 332 2334 2346678899999 59987777644
Q ss_pred -CeEEEEECC
Q psy9327 143 -QTIRIWYWQ 151 (641)
Q Consensus 143 -g~I~vWd~~ 151 (641)
+.|..||..
T Consensus 288 g~~v~~~~P~ 297 (355)
T 3sre_A 288 GMRIFFYDAE 297 (355)
T ss_dssp HHHHHSCCTT
T ss_pred ceEEEEECCC
Confidence 355555544
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.92 E-value=1.7 Score=44.53 Aligned_cols=99 Identities=9% Similarity=0.081 Sum_probs=62.7
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEc---cCCCCeEEE
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLL---GHLDYIRTT 127 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~---~h~~~V~~v 127 (641)
.-.+++|.|++.++++- .++.|.+++ +++. +..+. .......++
T Consensus 32 ~P~~ia~~pdG~l~V~e-----------------------------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gi 80 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAE-----------------------------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGL 80 (352)
T ss_dssp CEEEEEECTTSCEEEEE-----------------------------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEE
T ss_pred CceEEEEcCCCeEEEEe-----------------------------CCCeEEEEE--CCCccEeecceEeecCCCCceeE
Confidence 45789999999966664 568999998 4542 22221 224568899
Q ss_pred EEccC---CCEEE-EEeCC-----CeEEEEECCCC-----eeE-EEEc---cCCCCEEEEEEecCCCEEEEEe
Q psy9327 128 FFHHE---YPWIL-SASDD-----QTIRIWYWQSR-----NCI-CVLT---GHNHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 128 ~fsp~---~~~l~-sgs~D-----g~I~vWd~~~~-----~~i-~~l~---~h~~~V~sl~fsp~g~~lvSgs 182 (641)
+|+|+ +..|. +-..+ ..|..|+.... +.+ ..+. +..+....++|.|+|.+.++.+
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 99998 44444 43332 67888887643 122 2233 2223446899999998777654
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.59 E-value=1.1 Score=44.28 Aligned_cols=92 Identities=10% Similarity=0.049 Sum_probs=50.5
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEEE--ccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICVL--TGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~l--~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- ........++. -++.+++.|+.+ ..+.+||..+.+-...- ........++.+
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence 46889999887654331 11111122222 256677777764 46899999887643221 111111122222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
++.+++.|+.+ ..+.+||..+.+
T Consensus 253 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 253 --RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp --TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred --CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 56677777665 357788877644
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.07 E-value=8.1 Score=37.90 Aligned_cols=94 Identities=6% Similarity=0.032 Sum_probs=50.1
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- .........+.+ ++.+++.|+.++ .+.+||..+.+-... +........++.
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 153 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV- 153 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-
Confidence 45889998887643321 111112222222 566777777553 588899887753322 111111112222
Q ss_pred ecCCCEEEEEeCC-------CeEEEEecCCCcee
Q psy9327 172 HPTDDIVVSASLD-------QTIRVWDISGLRKK 198 (641)
Q Consensus 172 sp~g~~lvSgs~D-------gtI~IWD~~~~~~~ 198 (641)
-++.+++.|+.+ ..+.+||..+.+-.
T Consensus 154 -~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 154 -VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp -ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred -ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 256666666542 35888998776543
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.92 E-value=1.4 Score=43.74 Aligned_cols=92 Identities=5% Similarity=0.044 Sum_probs=51.0
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEEEccCC---CCEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICVLTGHN---HYVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~l~~h~---~~V~sl~ 170 (641)
..+.+||..+.+.... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-.. +.... .....+.
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~ 249 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVCA 249 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEEE
Confidence 4588999988764432 1111112222222 56777777764 368999998775332 22111 1111222
Q ss_pred EecCCCEEEEEeCCC-----eEEEEecCCCce
Q psy9327 171 FHPTDDIVVSASLDQ-----TIRVWDISGLRK 197 (641)
Q Consensus 171 fsp~g~~lvSgs~Dg-----tI~IWD~~~~~~ 197 (641)
.++.+++.|+.++ .+.+||..+.+-
T Consensus 250 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 250 --VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp --ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred --ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 2567777777653 478888876543
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.67 E-value=8.4 Score=46.15 Aligned_cols=142 Identities=12% Similarity=0.188 Sum_probs=88.2
Q ss_pred CCeEEEEe----------CCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 21 RPWILSSL----------HNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 21 g~~Lasg~----------~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..++++|. ..|.|.++++..+++.... ....++|++++-- +| +|++|
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~-------------------- 901 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLAS-------------------- 901 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEE--------------------
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEE--------------------
Confidence 46888886 3588999998744321111 1356888887743 34 55555
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECC--CCeeEEEE-ccCCCCE
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ--SRNCICVL-TGHNHYV 166 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~--~~~~i~~l-~~h~~~V 166 (641)
-..+|++|++...+.+..-..+-..|..+.....+++++.|..-..|.+..++ .++....- .-+...+
T Consensus 902 ---------ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~v 972 (1158)
T 3ei3_A 902 ---------INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972 (1158)
T ss_dssp ---------ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCE
T ss_pred ---------cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccE
Confidence 36789999998765443111111123333343457788888887777775543 34332222 2355678
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 167 MCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 167 ~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+++.|-.+ ..++.+..+|.+.+.....
T Consensus 973 ta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 973 SAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 88888754 4677789999999887654
No 325
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.79 E-value=15 Score=37.17 Aligned_cols=162 Identities=9% Similarity=0.146 Sum_probs=106.5
Q ss_pred CCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEe--CCCC-EEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQP-IFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs--p~~~-~l~sgs~~~~~~~~~ 79 (641)
..|..-..+++.+|++..|- .|.+++|..+.+ .-..+++|.+.-..+.+. +... .|+-+.+
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r-------- 222 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR-------- 222 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEE--------
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEe--------
Confidence 56777788899998875543 377899997655 334556665443322221 1111 2333321
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEcc---CCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~~---h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
....+++++-++... +.+..+-. ..+-.-++..++....+..-+.-|.|.+
T Consensus 223 -----------------~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihl 285 (365)
T 2xzh_A 223 -----------------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 285 (365)
T ss_dssp -----------------ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -----------------cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEE
Confidence 012357888877332 12222222 2455567889998888999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
||+.++.|+..-+-..+.|...+-+.+..-++.....|.|.--.+...+.
T Consensus 286 yDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 286 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 99999999998887788888777777666777777888887776665443
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.34 E-value=0.61 Score=44.59 Aligned_cols=132 Identities=10% Similarity=-0.018 Sum_probs=75.2
Q ss_pred CCCeEEEEeCCCcEEEEECccCcccccc------ccc--ccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 20 KRPWILSSLHNGVIQLWDYRMNTLLEKF------DEH--EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 20 dg~~Lasg~~dg~I~iWD~~~~~~l~~~------~~h--~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
...+|++...| +|+.=....+.. ..+ .++ =..++.++|||++.+.++ .
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~--------------------- 58 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKN-DNWLARATLIGKGGWSNFKFLFLSPGGELYGV-L--------------------- 58 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTT-CCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-E---------------------
T ss_pred cceEEEEEeCC-cEEecCCCCCcc-cchhhhccccCccccccceeEEECCCccEEEE-e---------------------
Confidence 34566666666 555444333331 111 112 136779999999997776 4
Q ss_pred eeEEEeeCCCeEEEEECCCCee------EEEE-c-cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEE------
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKC------IFTL-L-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC------ 157 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~------~~~~-~-~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~------ 157 (641)
+|.+.-.+..+... -..+ . +..+ -.++.|.|++.+.++ .||.|+-++-.+.....
T Consensus 59 --------~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~ 127 (236)
T 1tl2_A 59 --------NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARAT 127 (236)
T ss_dssp --------TTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSE
T ss_pred --------CCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecccc
Confidence 44544444433111 0111 0 1112 478999999987777 55999888764322111
Q ss_pred -EEccCCCCEEEEEEecCCCEEEEEeCCCeEE
Q psy9327 158 -VLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188 (641)
Q Consensus 158 -~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~ 188 (641)
.-.+-=..+..+.|.|+|.+.+.. |+.+.
T Consensus 128 ~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 128 EVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred EeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 111111457899999999988776 77743
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.04 E-value=1.4 Score=45.00 Aligned_cols=144 Identities=12% Similarity=0.020 Sum_probs=86.2
Q ss_pred CeEEEEeCCCcEEEEECccCccccccccc-ccCeEEEEEe--CCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEee
Q psy9327 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEH-EGPVRGICFH--NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG 98 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~~~~~l~~~~~h-~~~V~~i~fs--p~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s 98 (641)
..++.++.||.|.-.|..+|+.+.+++.. ..++....-. +.+..++.+. .+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~--------------------------p~ 64 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIE--------------------------PF 64 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEEC--------------------------CS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEE--------------------------EC
Confidence 46889999999999999999998888654 1232221100 0111222221 02
Q ss_pred CCCeEEEEECCCCeeEEEEcc----CCCCeEE----EEEc----cCCCEEEEEeCCCeEEEEECCCCeeEEEEccCC--C
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLG----HLDYIRT----TFFH----HEYPWILSASDDQTIRIWYWQSRNCICVLTGHN--H 164 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~----h~~~V~~----v~fs----p~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~--~ 164 (641)
.||.+..+|..+|.....+.. ...++.. +... ..+..+++|+.++.+.-.|.++|+.+..+.... +
T Consensus 65 ~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~ 144 (339)
T 2be1_A 65 GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG 144 (339)
T ss_dssp TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC
T ss_pred CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc
Confidence 799999999998866554432 2233332 0000 145578899999999999999999998886321 1
Q ss_pred C-----EEEEEEe-----cCCCEEEEEeCCCeEEEEe
Q psy9327 165 Y-----VMCAQFH-----PTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 165 ~-----V~sl~fs-----p~g~~lvSgs~DgtI~IWD 191 (641)
. ..|.... -.+..++.++.+..+.+.+
T Consensus 145 ~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 145 YFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp --------------------CCEEEEEEEEEECEECC
T ss_pred cccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 1 1111110 1245677777777777766
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.01 E-value=2.2 Score=42.53 Aligned_cols=94 Identities=9% Similarity=0.055 Sum_probs=50.1
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC-----eEEEEECCCCeeEEEE--ccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ-----TIRIWYWQSRNCICVL--TGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg-----~I~vWd~~~~~~i~~l--~~h~~~V~sl~f 171 (641)
..+.+||..+.+.... +........++. -++.+++.|+.++ .+.+||..+.+-...- .........+.+
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 242 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL 242 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE
Confidence 4688999888754332 111111122222 2567777777654 5889999877533221 111111122222
Q ss_pred ecCCCEEEEEeCCC--------------eEEEEecCCCcee
Q psy9327 172 HPTDDIVVSASLDQ--------------TIRVWDISGLRKK 198 (641)
Q Consensus 172 sp~g~~lvSgs~Dg--------------tI~IWD~~~~~~~ 198 (641)
++.+++.|+.++ .+.+||..+.+-.
T Consensus 243 --~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 243 --VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp --TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred --CCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 567777776532 3677888765443
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.00 E-value=38 Score=40.48 Aligned_cols=86 Identities=15% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCeeEEEecC---CCcceeeecCCcceEEEEEcCCccEEEEecCCeEEEEEcCCCCeEeccccceE------EEEEcCcE
Q psy9327 229 PKHTLHICNR---KMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIY------ITKIKGNQ 299 (641)
Q Consensus 229 ~d~~I~i~d~---~~~~~~~~~~~~~I~sla~~p~g~~L~t~s~~~k~~l~~~~~g~I~~~d~p~~------~~~~~g~~ 299 (641)
..|.|.+++- +++.+......+++.+++-- +|..++..+....++-|.. ++.++ .+...+ .....+++
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~-~~~L~-~~~~~~~~i~~~~l~~~~~~ 938 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTT-EKELR-TECNHYNNIMALYLKTKGDF 938 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECT-TSCEE-EEEEECCCSCEEEEEEETTE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCC-CceEE-EEeeccccEEEEEEeccCCE
Confidence 5688888883 23333333336778877643 3566666655555554533 33444 222111 23456889
Q ss_pred EEEEeCCCCeEEEEeCCc
Q psy9327 300 VYYLDRECSPHVLRIDPT 317 (641)
Q Consensus 300 v~~~~~dg~i~v~~~~~~ 317 (641)
++.++--..+..+..+..
T Consensus 939 I~vgD~~~Sv~~~~y~~~ 956 (1158)
T 3ei3_A 939 ILVGDLMRSVLLLAYKPM 956 (1158)
T ss_dssp EEEEESSBCEEEEEEETT
T ss_pred EEEEEhhheEEEEEEEcC
Confidence 999998888888776654
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.43 E-value=2.6 Score=41.69 Aligned_cols=149 Identities=7% Similarity=-0.001 Sum_probs=73.3
Q ss_pred CCCeEEEEeCC----CcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceee
Q psy9327 20 KRPWILSSLHN----GVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRI 93 (641)
Q Consensus 20 dg~~Lasg~~d----g~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~ 93 (641)
++.+++.|+.+ ..+.+||..+++-. ..+......-..+. -++..++.||...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~-------------------- 112 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEV-------------------- 112 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBT--------------------
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCC--------------------
Confidence 56677777754 56888887765421 11111111111112 2566666666100
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEc--cCCCCeEEEEEccCCCEEEEEeC---------CCeEEEEECCCCeeEEEEccC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLL--GHLDYIRTTFFHHEYPWILSASD---------DQTIRIWYWQSRNCICVLTGH 162 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~--~h~~~V~~v~fsp~~~~l~sgs~---------Dg~I~vWd~~~~~~i~~l~~h 162 (641)
.......+.+||..+.+....-. .......++. -++.+++.|+. -..+.+||..+.+-. .+...
T Consensus 113 --~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~ 187 (306)
T 3ii7_A 113 --GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPM 187 (306)
T ss_dssp --TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCC
T ss_pred --CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCc
Confidence 00012468899998876443211 1111122222 25666677654 345889999887532 22211
Q ss_pred CC-C-EEEEEEecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 163 NH-Y-VMCAQFHPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 163 ~~-~-V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
.. . -.+++.. ++.+++.|+.+ ..+.+||..+.+
T Consensus 188 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 188 IEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred cchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 11 1 1122222 56666666653 357777776643
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.18 E-value=17 Score=35.80 Aligned_cols=155 Identities=9% Similarity=0.026 Sum_probs=76.8
Q ss_pred ccCCCeEEEEeCC----CcEEEEECccCccc--ccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 18 HPKRPWILSSLHN----GVIQLWDYRMNTLL--EKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 18 spdg~~Lasg~~d----g~I~iWD~~~~~~l--~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
.-++.+++.||.+ ..+.+||..+++-. ..+......- +++. -++..++.||.... +
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~-------------~--- 83 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNS-------------P--- 83 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEE-------------T---
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCC-------------C---
Confidence 3356777778742 46888888765421 1111111111 1222 25666677761000 0
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccC
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGH 162 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h 162 (641)
........+.+||..+.+.... +.........+.+ ++.+++.|+.+ ..+.+||..+.+-... +...
T Consensus 84 ---~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 158 (308)
T 1zgk_A 84 ---DGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR 158 (308)
T ss_dssp ---TEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC
T ss_pred ---CCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc
Confidence 0001234688899887764332 1111112222222 56677777643 4688899887653221 1111
Q ss_pred CCCEEEEEEecCCCEEEEEeCC-----CeEEEEecCCCce
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLD-----QTIRVWDISGLRK 197 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~D-----gtI~IWD~~~~~~ 197 (641)
...-.++.+ ++.+++.|+.+ ..+.+||..+.+-
T Consensus 159 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 159 RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 111122222 56777777654 4588899877554
No 332
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.61 E-value=6.6 Score=40.19 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=66.7
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEE----ccCCCCeE
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTL----LGHLDYIR 125 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~----~~h~~~V~ 125 (641)
..-.+|+|.|++.++++-- ..|.|++++..+++. +..+ ....+...
T Consensus 32 ~~P~~ia~~pdG~llVter----------------------------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll 83 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSR----------------------------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLL 83 (347)
T ss_dssp SSEEEEEECTTSCEEEEET----------------------------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE
T ss_pred CCceEEEEcCCCcEEEEEe----------------------------cCCEEEEEECCCCcEeeecccCceeecCCCCce
Confidence 4567999999999887763 489999998766653 2222 12356788
Q ss_pred EEEEccC---CCEEEEE---eCCCeEEEEECCC----------CeeEE-EEc-cCCCCEEEEEEecCCCEEEEEeCC
Q psy9327 126 TTFFHHE---YPWILSA---SDDQTIRIWYWQS----------RNCIC-VLT-GHNHYVMCAQFHPTDDIVVSASLD 184 (641)
Q Consensus 126 ~v~fsp~---~~~l~sg---s~Dg~I~vWd~~~----------~~~i~-~l~-~h~~~V~sl~fsp~g~~lvSgs~D 184 (641)
+++|+|+ +.+|... ..+..|.-|.+.. .+.+. .+. +..+.-..+.|.|+|.+.++.++.
T Consensus 84 Gia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 84 GIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp EEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred eeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 9999995 3444332 2455666666544 12222 232 223345679999999888876543
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.30 E-value=6.1 Score=39.23 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=49.0
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeC-C-----CeEEEEECCCCeeEEE--EccCCCCEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASD-D-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQ 170 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~-D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~ 170 (641)
..+.+||..+++.... +........++ ..++.+++.|+. + ..+.+||..+.+-... +......-.++.
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 194 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVL--SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV 194 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEE--EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE
Confidence 4688999988764322 11111111222 235667777776 2 4689999887653221 111111112222
Q ss_pred EecCCCEEEEEeCCC-----eEEEEecCCCc
Q psy9327 171 FHPTDDIVVSASLDQ-----TIRVWDISGLR 196 (641)
Q Consensus 171 fsp~g~~lvSgs~Dg-----tI~IWD~~~~~ 196 (641)
+ ++.+++.|+.++ .+.+||..+.+
T Consensus 195 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 195 H--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp E--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred E--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 567777777654 47777877653
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.90 E-value=30 Score=36.52 Aligned_cols=162 Identities=9% Similarity=0.145 Sum_probs=107.8
Q ss_pred CCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEeCCC---CEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ---PIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~---~~l~sgs~~~~~~~~~ 79 (641)
..|..-..+++++|++..|- .|.+++|..+.+ .-..+++|.+.-..+...-+. ..++-+.+
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r-------- 221 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR-------- 221 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEEC--------
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEe--------
Confidence 56777888999999875543 478899998755 335566775554333332111 12222221
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECCCC---------eeEEEEc---cCCCCeEEEEEccCCCEEEEEeCCCeEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---------KCIFTLL---GHLDYIRTTFFHHEYPWILSASDDQTIRI 147 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---------~~~~~~~---~h~~~V~~v~fsp~~~~l~sgs~Dg~I~v 147 (641)
....++++|-++... +.+..+- .-.+-.-++..++....+..-+.-|.|.+
T Consensus 222 -----------------~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~l 284 (494)
T 1bpo_A 222 -----------------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 284 (494)
T ss_dssp -----------------STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -----------------cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEE
Confidence 012368888887432 1122221 12455567899999899999999999999
Q ss_pred EECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 148 Wd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
+|+.++.++..-+-..+.|...+-+.+..-++.....|.|.--.+.....
T Consensus 285 yDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 285 YDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 99999999988887788888777777777777777888877666665433
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.31 E-value=9.7 Score=40.45 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=63.9
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCee--EEEEcc------CCCCe
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLG------HLDYI 124 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~--~~~~~~------h~~~V 124 (641)
...+|+|.|+|+++++-. ..+.|.+++..+++. +..+.. ..+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~----------------------------~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gl 79 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTER----------------------------ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGL 79 (454)
T ss_dssp SEEEEEECTTSCEEEEET----------------------------TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSE
T ss_pred CceEEEEcCCCcEEEEEc----------------------------CCCEEEEEECCCCcEeEEecCCccccccCCCCce
Confidence 456899999999888763 345788888665543 223321 24567
Q ss_pred EEEEEccC---CCEEE-EEeC------------CCeEEEEECCCC-------eeEE-EEc-cCCCCEEEEEEecCCCEEE
Q psy9327 125 RTTFFHHE---YPWIL-SASD------------DQTIRIWYWQSR-------NCIC-VLT-GHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 125 ~~v~fsp~---~~~l~-sgs~------------Dg~I~vWd~~~~-------~~i~-~l~-~h~~~V~sl~fsp~g~~lv 179 (641)
.+++|+|+ +.+|. +-+. ...|.-|++... +.+. .+. +..+....+.|.|+|.+.+
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 89999995 44444 4332 234555655321 1222 122 2235678999999998877
Q ss_pred EEeCC
Q psy9327 180 SASLD 184 (641)
Q Consensus 180 Sgs~D 184 (641)
+.+..
T Consensus 160 ~~Gd~ 164 (454)
T 1cru_A 160 TIGDQ 164 (454)
T ss_dssp EECCT
T ss_pred EECCC
Confidence 76543
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.98 E-value=3.7 Score=40.71 Aligned_cols=92 Identities=7% Similarity=0.029 Sum_probs=49.7
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+.... +........++.+ ++.+++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 184 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 261 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH 261 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE
Confidence 4688999887764322 1111112222222 66777777765 5699999988753321 1111111122222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
++.+++.|+.+ ..+.+||..+.+
T Consensus 262 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 262 --QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp --TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred --CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 56677777654 357788877644
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.57 E-value=4.2 Score=40.52 Aligned_cols=95 Identities=4% Similarity=0.040 Sum_probs=48.6
Q ss_pred CeEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeCC-----CeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 101 YKIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASDD-----QTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~D-----g~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
..+.+||..+.+....- ........++. -++.+++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 251 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS- 251 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-
Confidence 45899999887644321 11111122222 256677777643 3577899887653221 111111112222
Q ss_pred ecCCCEEEEEeCC--------------CeEEEEecCCCceee
Q psy9327 172 HPTDDIVVSASLD--------------QTIRVWDISGLRKKN 199 (641)
Q Consensus 172 sp~g~~lvSgs~D--------------gtI~IWD~~~~~~~~ 199 (641)
.++.+++.|+.+ ..+.+||..+.+-..
T Consensus 252 -~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 252 -LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp -ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred -ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 256666766653 346677776654433
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.21 E-value=13 Score=36.72 Aligned_cols=91 Identities=8% Similarity=0.016 Sum_probs=46.9
Q ss_pred eEEEEECCCCeeEEEE--ccCCCCeEEEEEccCCCEEEEEeC------CCeEEEEECCCCeeEEE--EccCCCCEEEEEE
Q psy9327 102 KIKVWNYKQRKCIFTL--LGHLDYIRTTFFHHEYPWILSASD------DQTIRIWYWQSRNCICV--LTGHNHYVMCAQF 171 (641)
Q Consensus 102 ~I~vWD~~t~~~~~~~--~~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~~~~~~i~~--l~~h~~~V~sl~f 171 (641)
.+.+||..+.+....- ........ ++. .++.+++.|+. -..+.+||..+.+-... +........++.
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 204 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHN-VIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI- 204 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCE-EEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred eEEEEeCCCCCEeECCCCCCcccccE-EEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-
Confidence 5888898877644321 11111111 222 46667777764 23589999988753322 111111112222
Q ss_pred ecCCCEEEEEeCC-----CeEEEEecCCCc
Q psy9327 172 HPTDDIVVSASLD-----QTIRVWDISGLR 196 (641)
Q Consensus 172 sp~g~~lvSgs~D-----gtI~IWD~~~~~ 196 (641)
-++.+++.|+.+ ..+.+||..+.+
T Consensus 205 -~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 205 -HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp -ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred -ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 256777777653 246677776643
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.43 E-value=58 Score=36.57 Aligned_cols=216 Identities=12% Similarity=0.068 Sum_probs=117.4
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCc
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPC 89 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~ 89 (641)
..|.++....+| .|..|+.+| +..||..+.+...........|.++.. .++. +..+.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt------------------- 119 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGA------------------- 119 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEE-------------------
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEc-------------------
Confidence 568888877776 466666666 788998765432211112335776654 3443 33343
Q ss_pred ceeeEEEeeCCCeEEEEECCCCeeEEEEc-----cCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEE-cc--
Q psy9327 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLL-----GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TG-- 161 (641)
Q Consensus 90 ~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~-----~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l-~~-- 161 (641)
.+ -+..+|..+++.. .+. .....|.++...+++.+.+ |+. +-+..+|..+++..... ..
T Consensus 120 ---------~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~ 186 (758)
T 3ott_A 120 ---------LN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHS 186 (758)
T ss_dssp ---------TT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCT
T ss_pred ---------CC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCcc
Confidence 34 5788888776543 331 1235688888888887555 444 45778888776532211 11
Q ss_pred --CCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeeccCCCceeeeccc--CCCceeeeeeeeeeCCCeeEEEec
Q psy9327 162 --HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS--KHPIWKYCKPVKYCNPKHTLHICN 237 (641)
Q Consensus 162 --h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~--~~~v~~~~~~l~s~~~d~~I~i~d 237 (641)
....|.++...+++..|..|+. +-+..+|..+.+......-....+.++.. ...+| .+..+ -+.+++
T Consensus 187 ~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-------igT~~-Gl~~~~ 257 (758)
T 3ott_A 187 SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-------AGTDN-GLYVYH 257 (758)
T ss_dssp TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-------EEETT-EEEEEC
T ss_pred ccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-------EEeCC-ceeEEe
Confidence 1234888888877765555553 45788888765432211101122322221 12222 22233 466666
Q ss_pred CCCcceeeec---------CCcceEEEEEcCCccEEEEecCCe
Q psy9327 238 RKMEPLCNIH---------ENTRVKSGAWDESGVFIYTTSNHI 271 (641)
Q Consensus 238 ~~~~~~~~~~---------~~~~I~sla~~p~g~~L~t~s~~~ 271 (641)
.....+..+. ....|.++.-|.+|. ||.|+..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G 299 (758)
T 3ott_A 258 NDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG 299 (758)
T ss_dssp CTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS
T ss_pred cCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc
Confidence 4433332221 134588888887765 55555555
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=83.14 E-value=38 Score=33.53 Aligned_cols=259 Identities=10% Similarity=0.031 Sum_probs=126.7
Q ss_pred EccCCCeEEEEeC--CCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 17 FHPKRPWILSSLH--NGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 17 fspdg~~Lasg~~--dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
|++++.++.-+.. ++.|...+.+ |....++... . +--+++++.+|.-+.... + +.... .
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~-----~--------~~~~~-~ 81 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND--T--AMYINADKNYVYYVRNNN-----Q--------KITSQ-T 81 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE--E--EEEEEECSSEEEEEEECC--------------------C
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC--c--eeeEEEcCCEEEEEECCC-----C--------ccccc-c
Confidence 4457777776642 4555555543 4344444332 1 345578999888775100 0 00000 0
Q ss_pred EEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEe----CCCeEEEEECCCCeeEEEEccCCCCEEEEE
Q psy9327 95 SVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS----DDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170 (641)
Q Consensus 95 ~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs----~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~ 170 (641)
......+.|+..++..++... +.. .. +..|++++.+|+-.. .+..|..-++.... ...+..+.. ..
T Consensus 82 ~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~ 151 (302)
T 3s25_A 82 FFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FT 151 (302)
T ss_dssp CSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CC
T ss_pred eeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eE
Confidence 000124578888887665322 221 22 236788888887665 34567667766433 344544433 45
Q ss_pred EecCCCEEEEEeC-CCeEEEEecCCCceeeeccCCCceeeecccCCCceeeeeeeeee--CCCeeEEEecCCCcceeeec
Q psy9327 171 FHPTDDIVVSASL-DQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC--NPKHTLHICNRKMEPLCNIH 247 (641)
Q Consensus 171 fsp~g~~lvSgs~-DgtI~IWD~~~~~~~~~~~~~~~~v~s~~~~~~v~~~~~~l~s~--~~d~~I~i~d~~~~~~~~~~ 247 (641)
|+|++..|.-.+. ...|.+-++.+........+. .-. |++.....+... .....|...+..+.....+.
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--~~~------~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN--CYK------PVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT 223 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC--EEE------EEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC--ccc------eeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe
Confidence 6788888776655 678888888776654443321 100 111000001111 11234555554443333333
Q ss_pred CCcceEEEEEcCCccEEEEec--CCeEEEEEcCCCCe-EeccccceEEEEEcCcEEEEEe-CCCCeEEEEeC
Q psy9327 248 ENTRVKSGAWDESGVFIYTTS--NHIKYAIVNGDHGI-IRTLDLPIYITKIKGNQVYYLD-RECSPHVLRID 315 (641)
Q Consensus 248 ~~~~I~sla~~p~g~~L~t~s--~~~k~~l~~~~~g~-I~~~d~p~~~~~~~g~~v~~~~-~dg~i~v~~~~ 315 (641)
. ..+ ..|+|+|.+|+-++ ....+...+.+... .+..+.........++.|+-.+ +.+.+...+.+
T Consensus 224 ~-~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 224 E-ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGEFCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp C-SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESCEEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred C-CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCccceEEEeCCEEEEEECCCCeEEEEECC
Confidence 2 233 34778888887653 23444444433322 1222222233445566665555 44555555544
No 341
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.77 E-value=38 Score=33.16 Aligned_cols=89 Identities=9% Similarity=-0.015 Sum_probs=46.1
Q ss_pred CCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEccCCCCEEEEEEecCCCEEE
Q psy9327 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179 (641)
Q Consensus 100 Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lv 179 (641)
||.|..|-....-.+..-..-...|..++...+. .+.-. |+.|+.|-......+..-......|..++...+...+
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~- 155 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA- 155 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE-
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE-
Confidence 7888888654321111001113467777765544 33334 8999999765422111111123456666654332223
Q ss_pred EEeCCCeEEEEecCC
Q psy9327 180 SASLDQTIRVWDISG 194 (641)
Q Consensus 180 Sgs~DgtI~IWD~~~ 194 (641)
-. ||.+..|-...
T Consensus 156 -l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 156 -VK-NGGVIAWGDNY 168 (282)
T ss_dssp -EE-TTEEEEEECCT
T ss_pred -EE-CCEEEEecCCC
Confidence 23 79999997654
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=81.92 E-value=46 Score=33.60 Aligned_cols=102 Identities=10% Similarity=0.084 Sum_probs=59.4
Q ss_pred cCeEEEEEeCCCC-EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEE-------ccCCCC
Q psy9327 52 GPVRGICFHNQQP-IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-------LGHLDY 123 (641)
Q Consensus 52 ~~V~~i~fsp~~~-~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~-------~~h~~~ 123 (641)
....+|+|.|+++ ++++- ..|.|++++.. ++....+ ....+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e-----------------------------~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g 67 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL-----------------------------RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGG 67 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE-----------------------------TTTEEEEEETT-TEECCCCBSCCCCCCSTTCS
T ss_pred CCcEEEEEcCCCCEEEEEe-----------------------------CCceEEEEeCC-CceeeEecCCcccccCCCCC
Confidence 3457899999999 66554 57899999853 4322111 122456
Q ss_pred eEEEEEccC---CCEE-EEEeC-------CCeEEEEECCCC--e--eEEE-Ec------cCCCCEEEEEEecCCCEEEEE
Q psy9327 124 IRTTFFHHE---YPWI-LSASD-------DQTIRIWYWQSR--N--CICV-LT------GHNHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 124 V~~v~fsp~---~~~l-~sgs~-------Dg~I~vWd~~~~--~--~i~~-l~------~h~~~V~sl~fsp~g~~lvSg 181 (641)
...++|+|+ +.+| ++-+. ...|..|++... + .... +. ...+....+.|.|+|.+.++.
T Consensus 68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred ceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 789999995 4444 44322 235666666432 1 1111 11 112334679999999766665
Q ss_pred eC
Q psy9327 182 SL 183 (641)
Q Consensus 182 s~ 183 (641)
+.
T Consensus 148 Gd 149 (353)
T 2g8s_A 148 GE 149 (353)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.76 E-value=73 Score=35.75 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=88.9
Q ss_pred CCCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccc-cccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccC
Q psy9327 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNE 87 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~-~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~ 87 (641)
.+.|.+|.-..+|. +..|..+| +..||-..-+..... ......|.++.-.+++. |..|.
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigT----------------- 80 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTY-LYMGT----------------- 80 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTE-EEEEE-----------------
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCc-EEEEe-----------------
Confidence 46799999988885 55666777 556774322111111 11245688887777664 44443
Q ss_pred CcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc-----cC
Q psy9327 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-----GH 162 (641)
Q Consensus 88 ~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~-----~h 162 (641)
.+| +..||..+.+...........|+++.. .++. +..|+.+ .+..+|..+++.. .+. -.
T Consensus 81 -----------~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~ 144 (758)
T 3ott_A 81 -----------DNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLT-SFDTRRNGLP 144 (758)
T ss_dssp -----------TTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEE-EECHHHHCCS
T ss_pred -----------CCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEE-EeccCCCCcC
Confidence 444 788998876543211112335777654 3454 5555555 6888998766533 331 12
Q ss_pred CCCEEEEEEecCCCEEEEEeCCCeEEEEecCCCce
Q psy9327 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197 (641)
Q Consensus 163 ~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~ 197 (641)
...|.++...++|.+.+ |+.+ -+..+|..+.+.
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~ 177 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF 177 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce
Confidence 35688888777777555 4444 577788776543
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=80.96 E-value=3.6 Score=44.69 Aligned_cols=116 Identities=16% Similarity=0.025 Sum_probs=76.1
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------Cee-------EEEEcc
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------RKC-------IFTLLG 119 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------~~~-------~~~~~~ 119 (641)
...++.++|||+++++++. .+.++.|+|++. ++. ....+.
T Consensus 324 sPHGv~vsPDGkyi~v~GK---------------------------LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGK---------------------------LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp SCCCEEECTTSCEEEEECT---------------------------TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCcceeeCCCCCEEEEcCC---------------------------CCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 4467889999999999884 788999999873 111 222222
Q ss_pred CCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCC----------eeEEEEccCCCCEEEE-----EEecCCCEEEEEeC-
Q psy9327 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR----------NCICVLTGHNHYVMCA-----QFHPTDDIVVSASL- 183 (641)
Q Consensus 120 h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~----------~~i~~l~~h~~~V~sl-----~fsp~g~~lvSgs~- 183 (641)
-. .....+|.++|.-..|-.-|..|.-||+... ..+..+.-|-.+-.-. .-.|+|+||++...
T Consensus 377 Gl-GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 377 GL-GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp CS-CEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred CC-cccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 22 4467899999965666678999999998653 3455565443322211 12568899998754
Q ss_pred --CCe----------EEEEecCCCc
Q psy9327 184 --DQT----------IRVWDISGLR 196 (641)
Q Consensus 184 --Dgt----------I~IWD~~~~~ 196 (641)
|+. -.+.|++..+
T Consensus 456 skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 456 SKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp CTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred ccccCcCCCCCCCCcceeEecCCCc
Confidence 443 3667775543
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.70 E-value=41 Score=37.64 Aligned_cols=94 Identities=7% Similarity=0.016 Sum_probs=54.0
Q ss_pred eEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeCCC--eEEEEECCCCeeEEEE-----ccCCCCEEEEEEe
Q psy9327 102 KIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASDDQ--TIRIWYWQSRNCICVL-----TGHNHYVMCAQFH 172 (641)
Q Consensus 102 ~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~Dg--~I~vWd~~~~~~i~~l-----~~h~~~V~sl~fs 172 (641)
.+.+||..+.+.... +......- +++...++.+++.||.++ .+.+||..+.+-...- ......-.++.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 488899888654332 11111111 233324788888888655 7999999887632211 1111122335556
Q ss_pred cC-CCEEEEEeC--C-----CeEEEEecCCCc
Q psy9327 173 PT-DDIVVSASL--D-----QTIRVWDISGLR 196 (641)
Q Consensus 173 p~-g~~lvSgs~--D-----gtI~IWD~~~~~ 196 (641)
.+ +.+++.|+. + ..+.+||+.+.+
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 55 667777765 2 468899988766
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.59 E-value=18 Score=40.73 Aligned_cols=151 Identities=9% Similarity=0.091 Sum_probs=78.7
Q ss_pred CCCeEEEEeCC------CcEEEEECccCcc--cccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcce
Q psy9327 20 KRPWILSSLHN------GVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLF 91 (641)
Q Consensus 20 dg~~Lasg~~d------g~I~iWD~~~~~~--l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~ 91 (641)
++.+++.||.+ ..+.+||..+.+- +..+...... .+++...++..++.||.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~-------------------- 509 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGV-------------------- 509 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCB--------------------
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCC--------------------
Confidence 67777777754 3477888766432 2111111111 12222247778888772
Q ss_pred eeEEEeeCCCeEEEEECCCCeeEEEEc-----cCCCCeEEEEEccC-CCEEEEEeC--C-----CeEEEEECCCCee---
Q psy9327 92 RIKSVLGDDYKIKVWNYKQRKCIFTLL-----GHLDYIRTTFFHHE-YPWILSASD--D-----QTIRIWYWQSRNC--- 155 (641)
Q Consensus 92 ~~~~~~s~Dg~I~vWD~~t~~~~~~~~-----~h~~~V~~v~fsp~-~~~l~sgs~--D-----g~I~vWd~~~~~~--- 155 (641)
..++.+.+||..+.+....-. .......++.+..+ +.+++.||. + ..+.+||+.+.+.
T Consensus 510 ------~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~ 583 (695)
T 2zwa_A 510 ------TEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEP 583 (695)
T ss_dssp ------CSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCC
T ss_pred ------CCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccc
Confidence 012278999998876443221 11122233555555 667777775 2 4688999887761
Q ss_pred --EEEEcc---CCCCEEEEEEecCCCEEEEEeCC--------CeEEEEecCCCce
Q psy9327 156 --ICVLTG---HNHYVMCAQFHPTDDIVVSASLD--------QTIRVWDISGLRK 197 (641)
Q Consensus 156 --i~~l~~---h~~~V~sl~fsp~g~~lvSgs~D--------gtI~IWD~~~~~~ 197 (641)
...+.. ....-.+++...++.+++.|+.+ ..+.+||..+.+-
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred eEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 222211 11111123333336677777643 3577777766443
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.49 E-value=23 Score=37.60 Aligned_cols=53 Identities=9% Similarity=0.110 Sum_probs=35.4
Q ss_pred CCeEEEEEccCCC-eEEEEeCCCcEEEEECccCc---cccc----ccc-----cccCeEEEEEeCC
Q psy9327 10 ARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNT---LLEK----FDE-----HEGPVRGICFHNQ 62 (641)
Q Consensus 10 ~~V~~l~fspdg~-~Lasg~~dg~I~iWD~~~~~---~l~~----~~~-----h~~~V~~i~fsp~ 62 (641)
..-.+|+|.|+|. .++++...|.|++++-.... .+.. +.. ..+...+|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4467899999996 56667788999999743221 1111 111 1457889999996
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.44 E-value=7.8 Score=39.14 Aligned_cols=57 Identities=7% Similarity=0.078 Sum_probs=29.0
Q ss_pred eEEEEECCCCee--EEEEccCCCCEEEEEEecCCCEEEEEeCCC------eEEEEecCCCceeeecc
Q psy9327 144 TIRIWYWQSRNC--ICVLTGHNHYVMCAQFHPTDDIVVSASLDQ------TIRVWDISGLRKKNVAP 202 (641)
Q Consensus 144 ~I~vWd~~~~~~--i~~l~~h~~~V~sl~fsp~g~~lvSgs~Dg------tI~IWD~~~~~~~~~~~ 202 (641)
.+.+||..+.+- +..+......-.++ ..++.+++.|+.++ .+.++++++.+.....+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 578899886642 33332222222222 33677888888653 35556887776655443
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=77.74 E-value=12 Score=38.18 Aligned_cols=109 Identities=8% Similarity=-0.081 Sum_probs=69.8
Q ss_pred EEEeeCCCeEEEEECCCCeeEEEEccC-CCCeEEEEEc--cCCCEEEEE--eCCCeEEEEECCCCeeEEEEcc----CCC
Q psy9327 94 KSVLGDDYKIKVWNYKQRKCIFTLLGH-LDYIRTTFFH--HEYPWILSA--SDDQTIRIWYWQSRNCICVLTG----HNH 164 (641)
Q Consensus 94 ~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~~~V~~v~fs--p~~~~l~sg--s~Dg~I~vWd~~~~~~i~~l~~----h~~ 164 (641)
+.+++.||.|.-.|.++|+.+.+++.. ..++....-. +.+..++.+ +.||.+..+|..++.....+.- ...
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~S 92 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTS 92 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceecc
Confidence 334459999999999999999999764 1233221100 112234433 6899999999988865443321 122
Q ss_pred CEEE----EEEe----cCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 165 YVMC----AQFH----PTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 165 ~V~s----l~fs----p~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
++.. +... ..+..+++|+.+|++...|.++++.+-.+.
T Consensus 93 P~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 93 PLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp SEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 2221 0000 146688999999999999999999887765
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=76.79 E-value=24 Score=42.86 Aligned_cols=161 Identities=9% Similarity=0.137 Sum_probs=98.3
Q ss_pred CCCeEEEEEccCCCeEEEEeC-------CCcEEEEECccCcccccccccccCeEEEEEe--CC-CCEEEEeceeeEEeee
Q psy9327 9 SARVKGLSFHPKRPWILSSLH-------NGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQ-QPIFVSGGKMIVMAYQ 78 (641)
Q Consensus 9 ~~~V~~l~fspdg~~Lasg~~-------dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fs--p~-~~~l~sgs~~~~~~~~ 78 (641)
...|..-..+++++|++..|- .|.+++|..+.+ .-..+++|.+.-..+... +. ...++.+.+
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~------- 221 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVR------- 221 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEe-------
Confidence 356778888999999875443 588999998755 334566776554333332 11 112222220
Q ss_pred ceeeecccCCcceeeEEEeeCCCeEEEEECCCC---ee------EEEEcc---CCCCeEEEEEccCCCEEEEEeCCCeEE
Q psy9327 79 GCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KC------IFTLLG---HLDYIRTTFFHHEYPWILSASDDQTIR 146 (641)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~------~~~~~~---h~~~V~~v~fsp~~~~l~sgs~Dg~I~ 146 (641)
....++++|-++... .+ +..+.. -.+-..++..++....+..-+.-|.|.
T Consensus 222 ------------------~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~ 283 (1630)
T 1xi4_A 222 ------------------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIH 283 (1630)
T ss_pred ------------------cCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEE
Confidence 012357777777432 11 111111 233345678888888888888899999
Q ss_pred EEECCCCeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCCC
Q psy9327 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195 (641)
Q Consensus 147 vWd~~~~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~ 195 (641)
++|+.++.++..-+-..+.|...+-+....-++.....|.|.--.+...
T Consensus 284 ~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 284 LYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred EEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 9999999998776655666666655554444555556666665555443
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.98 E-value=9.9 Score=41.34 Aligned_cols=103 Identities=9% Similarity=0.030 Sum_probs=69.1
Q ss_pred CCeEEEEEccCCCeEEEEeC-CCcEEEEECccCcc-------------cccccccccCeEEEEEeCCCCEEEEeceeeEE
Q psy9327 10 ARVKGLSFHPKRPWILSSLH-NGVIQLWDYRMNTL-------------LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~-dg~I~iWD~~~~~~-------------l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~ 75 (641)
....++.++|||++++.++. +.++.++|++.-.. ....+ -.-.-...+|.++|....+--
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlf----- 396 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLF----- 396 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEET-----
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeee-----
Confidence 34568899999999887775 89999999874211 11111 223456789999994444443
Q ss_pred eeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC----------eeEEEEccCCCCeEEEE-----EccCCCEEEEEe
Q psy9327 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR----------KCIFTLLGHLDYIRTTF-----FHHEYPWILSAS 140 (641)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~----------~~~~~~~~h~~~V~~v~-----fsp~~~~l~sgs 140 (641)
-|..|.-|++... ..+..+.-|-.+-...+ -.++|+||++..
T Consensus 397 -----------------------idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 -----------------------IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp -----------------------TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred -----------------------ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 7999999998653 45667776655433222 247899999986
Q ss_pred C
Q psy9327 141 D 141 (641)
Q Consensus 141 ~ 141 (641)
.
T Consensus 454 K 454 (638)
T 3sbq_A 454 K 454 (638)
T ss_dssp S
T ss_pred c
Confidence 4
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.36 E-value=44 Score=35.38 Aligned_cols=104 Identities=10% Similarity=0.073 Sum_probs=62.3
Q ss_pred CeEEEEEeCCCC--EEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCC---eeEEEEc---------
Q psy9327 53 PVRGICFHNQQP--IFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR---KCIFTLL--------- 118 (641)
Q Consensus 53 ~V~~i~fsp~~~--~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~---~~~~~~~--------- 118 (641)
.-..|+|.|++. ++++- ..|.|++++.... +.+..+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~e-----------------------------r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~ 65 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILE-----------------------------KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKG 65 (463)
T ss_dssp SEEEEECCSSSSCCEEEEE-----------------------------TTTEEEEECTTSCBCSSCSEECTTTBCCCCSS
T ss_pred CceEEEECCCCCeEEEEEe-----------------------------CCceEEEEeCCCCeeeeeecCCcceeccCccc
Confidence 446899999985 66554 6899999975422 1222221
Q ss_pred cCCCCeEEEEEccC----CCEEEEEeC--C----------CeEEEEECCC----------CeeEEEEc--cCCCCEEEEE
Q psy9327 119 GHLDYIRTTFFHHE----YPWILSASD--D----------QTIRIWYWQS----------RNCICVLT--GHNHYVMCAQ 170 (641)
Q Consensus 119 ~h~~~V~~v~fsp~----~~~l~sgs~--D----------g~I~vWd~~~----------~~~i~~l~--~h~~~V~sl~ 170 (641)
...+....|+|+|+ +.+.++-+. + ..|.-|.+.. .+.+..+. ...+.-..+.
T Consensus 66 ~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~ 145 (463)
T 2wg3_C 66 GDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLL 145 (463)
T ss_dssp SCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEE
T ss_pred cCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEe
Confidence 11457889999996 333343322 1 1344455532 23333332 3345678999
Q ss_pred EecCCCEEEEEeCCC
Q psy9327 171 FHPTDDIVVSASLDQ 185 (641)
Q Consensus 171 fsp~g~~lvSgs~Dg 185 (641)
|.|||.+.++.++.+
T Consensus 146 fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 146 FGPDGFLYIILGDGM 160 (463)
T ss_dssp ECTTSCEEEEECCTT
T ss_pred ECCCCcEEEEeCCCC
Confidence 999998888776644
No 353
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=67.24 E-value=17 Score=36.51 Aligned_cols=49 Identities=2% Similarity=-0.179 Sum_probs=26.2
Q ss_pred CeEEEEECCCCeeEEE--EccCCCCeEEEEEccCCCEEEEEeC------CCeEEEEEC
Q psy9327 101 YKIKVWNYKQRKCIFT--LLGHLDYIRTTFFHHEYPWILSASD------DQTIRIWYW 150 (641)
Q Consensus 101 g~I~vWD~~t~~~~~~--~~~h~~~V~~v~fsp~~~~l~sgs~------Dg~I~vWd~ 150 (641)
..+.+||..+.+.... +......-.+++.. ++.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 5789999988764433 22111110122222 5666666664 345777877
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=60.08 E-value=64 Score=31.42 Aligned_cols=173 Identities=10% Similarity=-0.024 Sum_probs=83.5
Q ss_pred CCeEEEEEccCCCeEEEEeCCCcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeec-----
Q psy9327 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILES----- 84 (641)
Q Consensus 10 ~~V~~l~fspdg~~Lasg~~dg~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~----- 84 (641)
..|..++...+...++ . ||.|..|-....-.+..-..-...|..|+...+...+++ +..++.|.....-.
T Consensus 63 ~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg~~~ 137 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTTVPA 137 (282)
T ss_dssp SCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTSCCG
T ss_pred CCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCCCCc
Confidence 4677777776655444 3 788888876432221111112346777766655555555 23344432111000
Q ss_pred ccCCc------ceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEE
Q psy9327 85 RNEPC------LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158 (641)
Q Consensus 85 ~~~~~------~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~ 158 (641)
..... ...+.++-. ||.|..|-......+..-..-...|..++.-.....+ - .|+.|+.|-......+..
T Consensus 138 ~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~a--l-~~G~v~~wG~n~~gqlg~ 213 (282)
T 3qhy_B 138 EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLA--L-KDGKVIAWGDNRYKQTTV 213 (282)
T ss_dssp GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--E-ETTEEEEEECCTTSTTCC
T ss_pred cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEE--E-ECCeEEEEECCCCCCCCC
Confidence 00000 011112223 7888888765421111111123457667665443322 2 599999997654321111
Q ss_pred EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 159 l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
-......|..++-......+++ ||.+..|-...
T Consensus 214 p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 214 PTEALSGVSAIASGEWYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp CGGGGSSCCEEEECSSCEEEEE---TTEEEEESTTC
T ss_pred CcccCCCceEEEcCCCEEEEEE---CCEEEEecCCC
Confidence 1111234666665433333333 99999997655
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.44 E-value=33 Score=40.09 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=33.4
Q ss_pred CeEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 123 ~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.+.+++.+++..++++-+.|+++|+||+.+++|+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677888888999999999999999999999988753
No 356
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=59.26 E-value=1.5e+02 Score=29.64 Aligned_cols=155 Identities=7% Similarity=0.003 Sum_probs=87.6
Q ss_pred CCeEEEEEcc---CCCeEEEEeCCCcEEEEECccC-------cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeec
Q psy9327 10 ARVKGLSFHP---KRPWILSSLHNGVIQLWDYRMN-------TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQG 79 (641)
Q Consensus 10 ~~V~~l~fsp---dg~~Lasg~~dg~I~iWD~~~~-------~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~ 79 (641)
..|.++..-+ +..+++..+.+|.|+--.+..- ....++... ..+..+........++..+
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T--------- 164 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVS--------- 164 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEE---------
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEE---------
Confidence 4555554333 5779999999999998886532 222233332 3344444433334444443
Q ss_pred eeeecccCCcceeeEEEeeCCCeEEEEECC--C---------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYK--Q---------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~--t---------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
..|.+..+... . |.....+. ..+.|.++...+++..++.++..|.++.-
T Consensus 165 -------------------~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 165 -------------------ANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp -------------------TTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred -------------------CCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 67777666654 1 11111222 34567777766667789999999999988
Q ss_pred ECCCC-------eeEEE--EccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 149 YWQSR-------NCICV--LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 149 d~~~~-------~~i~~--l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
.+..- +-+.. +..-.+.+..+....+...++..+.+|.+..++...
T Consensus 225 ~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 225 AIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 75321 22222 222234455554444455666667777776666543
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=59.14 E-value=1.5e+02 Score=29.82 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=35.5
Q ss_pred CCeEEEEEccC-CCEEEEEeCCCeEEEEECCCCeeEEEEcc-----C--------CCCEEEEEEecC-CCEEEEEeCCCe
Q psy9327 122 DYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTG-----H--------NHYVMCAQFHPT-DDIVVSASLDQT 186 (641)
Q Consensus 122 ~~V~~v~fsp~-~~~l~sgs~Dg~I~vWd~~~~~~i~~l~~-----h--------~~~V~sl~fsp~-g~~lvSgs~Dgt 186 (641)
..+.++.++|. ...+..+..++.|...+ ..++....+.. + ...+.++.++|+ ...+..++..+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 35788999884 33344444444444432 22222222211 0 124889999996 35666666544
Q ss_pred EEEEe
Q psy9327 187 IRVWD 191 (641)
Q Consensus 187 I~IWD 191 (641)
|...+
T Consensus 255 l~~s~ 259 (394)
T 3b7f_A 255 IYRMD 259 (394)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 44433
No 358
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=58.76 E-value=1.5e+02 Score=29.40 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=47.9
Q ss_pred CCeEEEEEcc---CCCEEEEEeCCCeEEEEECCC-------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEe
Q psy9327 122 DYIRTTFFHH---EYPWILSASDDQTIRIWYWQS-------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191 (641)
Q Consensus 122 ~~V~~v~fsp---~~~~l~sgs~Dg~I~vWd~~~-------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD 191 (641)
+.|.++...+ ++..++..+..|.++-..+.. +.....+.. .+.+..+....++..++..+.+|....++
T Consensus 100 e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~ 178 (312)
T 1suu_A 100 EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFN 178 (312)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 3455553333 466788899999999887632 222223343 56676666665567788899999998888
Q ss_pred cCC
Q psy9327 192 ISG 194 (641)
Q Consensus 192 ~~~ 194 (641)
...
T Consensus 179 ~~e 181 (312)
T 1suu_A 179 SRD 181 (312)
T ss_dssp GGG
T ss_pred HHH
Confidence 765
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=58.58 E-value=1.4e+02 Score=29.26 Aligned_cols=144 Identities=7% Similarity=-0.048 Sum_probs=83.7
Q ss_pred EEEccCCCeEEEEeCC--------------CcEEEEECccCcccccccccccCeEEEEEeCCCCEEEEeceeeEEeeece
Q psy9327 15 LSFHPKRPWILSSLHN--------------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGC 80 (641)
Q Consensus 15 l~fspdg~~Lasg~~d--------------g~I~iWD~~~~~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~ 80 (641)
--++++|.+|+-+..+ +.|+..+...++. ..+. ..+ +..|++++.+|+-...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~--~~~--~~~~s~~g~~Iy~~~~--------- 123 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLD--PDP--CIYASLIGNYIYYLHY--------- 123 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEE--CSC--EEEEEEETTEEEEEEE---------
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEee--cCC--ccEEEEeCCEEEEEee---------
Confidence 3468899988866543 3566667665532 2221 122 2367888887776530
Q ss_pred eeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCCCCeEEEEEccCCCEEEEEeC-CCeEEEEECCCCeeEEEE
Q psy9327 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD-DQTIRIWYWQSRNCICVL 159 (641)
Q Consensus 81 ~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~-Dg~I~vWd~~~~~~i~~l 159 (641)
+...+..|..-++.... ...+..+.. .+|++++..|.-.+. ...|.+-++..+.....+
T Consensus 124 ---------------~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 124 ---------------DTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp ---------------SSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred ---------------cCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 00145567777776433 344444432 456788888876655 678888888776544333
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCC--CeEEEEecCCCc
Q psy9327 160 TGHNHYVMCAQFHPTDDIVVSASLD--QTIRVWDISGLR 196 (641)
Q Consensus 160 ~~h~~~V~sl~fsp~g~~lvSgs~D--gtI~IWD~~~~~ 196 (641)
.+ ... ..++|++.+|+-...+ ..|..-++.+..
T Consensus 184 ~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 184 DC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp CS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred CC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 32 222 3467888887765543 355555665544
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.43 E-value=96 Score=36.90 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=31.0
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
.+.+++..++..++++-+.|+++|+||+.++++..+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666778899999999999999999999887764
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.89 E-value=80 Score=36.81 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=32.4
Q ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeec
Q psy9327 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201 (641)
Q Consensus 165 ~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~ 201 (641)
.+.+++..++..++++-+.|+++|+||+.++++..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677888888899999999999999999999887764
No 362
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=50.27 E-value=11 Score=35.67 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=33.5
Q ss_pred cceeEEeeCCCCceEEEeCCcchhhhHHHhccChhHHHHhhhcCccc
Q psy9327 584 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLV 630 (641)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (641)
.+.+|.+|.+|++|.+.++|.. +.|++||+|++|+.-+++
T Consensus 143 ~R~tFiID~~G~Ir~~~v~~~~-------~grn~dEiLr~l~AlQ~~ 182 (216)
T 3sbc_A 143 LRGLFIIDPKGVIRHITINDLP-------VGRNVDEALRLVEAFQWT 182 (216)
T ss_dssp CEEEEEECTTSBEEEEEEECTT-------BCCCHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEEcCCC-------CCCCHHHHHHHHHHhhhH
Confidence 3679999999999999998854 479999999999865543
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.83 E-value=1.3e+02 Score=33.63 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=28.8
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
|.++.+ ++.++++-+.|.++|+||+++++++.+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 47799999999999999999999887764
No 364
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=44.04 E-value=2.4e+02 Score=27.64 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=46.8
Q ss_pred CCCeEEEEEc---cCCCEEEEEeCCCeEEEEECCC-------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Q psy9327 121 LDYIRTTFFH---HEYPWILSASDDQTIRIWYWQS-------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190 (641)
Q Consensus 121 ~~~V~~v~fs---p~~~~l~sgs~Dg~I~vWd~~~-------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IW 190 (641)
.+.|.++... .++++++.++.+|.++-..+.. +.....+..+ +.+..+....+...++..+.+|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 94 DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRF 172 (307)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEE
Confidence 3456555432 3566899999999999987631 1111223334 666666655556677788888888888
Q ss_pred ecCC
Q psy9327 191 DISG 194 (641)
Q Consensus 191 D~~~ 194 (641)
+...
T Consensus 173 ~~~~ 176 (307)
T 1zi0_A 173 KESS 176 (307)
T ss_dssp EGGG
T ss_pred EHHH
Confidence 7654
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.29 E-value=2.4e+02 Score=27.28 Aligned_cols=155 Identities=8% Similarity=0.007 Sum_probs=88.1
Q ss_pred CCCeEEEEEcc-CCCeEEEEeCCCcEEEEECccCc------ccccccccccCeEEEEEeCCCCEEEEeceeeEEeeecee
Q psy9327 9 SARVKGLSFHP-KRPWILSSLHNGVIQLWDYRMNT------LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCI 81 (641)
Q Consensus 9 ~~~V~~l~fsp-dg~~Lasg~~dg~I~iWD~~~~~------~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~ 81 (641)
.+.|.++-... +.++++..+.+|.|+-.....-. ...+++.. ..+..+....+...++..+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkeg-D~l~~~~~~~~~~~ill~T----------- 134 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEG-DEVVSIASSVDETHILLFT----------- 134 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTT-CCEEEEEECCSSCEEEEEE-----------
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCC-CEEEEEEEeCCCCEEEEEE-----------
Confidence 45566664421 46789999999999998865422 11222222 2333333333333444443
Q ss_pred eecccCCcceeeEEEeeCCCeEEEEECC---------CCeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEEECCC
Q psy9327 82 LESRNEPCLFRIKSVLGDDYKIKVWNYK---------QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152 (641)
Q Consensus 82 ~~~~~~~~~~~~~~~~s~Dg~I~vWD~~---------t~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~ 152 (641)
..|.+..++.. .|.....+. ..+.|.++...+++..++..+..|.++...+..
T Consensus 135 -----------------~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 135 -----------------KKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp -----------------TTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred -----------------CCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 67776666542 122222233 235666666666677899999999999887632
Q ss_pred -------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEE--EecCC
Q psy9327 153 -------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV--WDISG 194 (641)
Q Consensus 153 -------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~I--WD~~~ 194 (641)
++-+..+ ...+.+..+....++..++..+.+|.+.. ++...
T Consensus 197 ~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 197 IPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred cccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 2223333 23455655544444456777777888777 77654
No 366
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=41.50 E-value=2.9e+02 Score=27.73 Aligned_cols=47 Identities=9% Similarity=0.022 Sum_probs=26.2
Q ss_pred CeEEEEeCCCcEEEEECc-cCccccccc--ccccCeEEEEEeC--CCCEEEEe
Q psy9327 22 PWILSSLHNGVIQLWDYR-MNTLLEKFD--EHEGPVRGICFHN--QQPIFVSG 69 (641)
Q Consensus 22 ~~Lasg~~dg~I~iWD~~-~~~~l~~~~--~h~~~V~~i~fsp--~~~~l~sg 69 (641)
..|.+|...| +.+++-. .++...... .....|.+|++.| .+.+.+.+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~ 74 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA 74 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe
Confidence 3677888877 4444432 222222221 2245799999998 45555544
No 367
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=34.11 E-value=27 Score=32.96 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=33.0
Q ss_pred cceeEEeeCCCCceEEEeCCcchhhhHHHhccChhHHHHhhhcCccc
Q psy9327 584 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLV 630 (641)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (641)
.+.+|.+|.+|++|.+.++|.. +.|+.+|||+.|+.-+++
T Consensus 147 ~R~tFiIDp~g~Ir~~~~~~~~-------~gr~~~EvLr~l~aLQ~~ 186 (219)
T 3tue_A 147 YRGLFIIDPHGMLRQITVNDMP-------VGRSVEEVLRLLEAFQFV 186 (219)
T ss_dssp CEEEEEECTTSBEEEEEEECTT-------CCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCeEEEEEEecCC-------CCCCHHHHHHHHHHhhhH
Confidence 3678999999999999887653 479999999999876543
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=31.64 E-value=35 Score=40.75 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=31.6
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
+.+++.+++..++++-+.|+++|+||+.+++|+.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455667788899999999999999999999988764
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=30.32 E-value=3.7e+02 Score=25.78 Aligned_cols=160 Identities=9% Similarity=-0.023 Sum_probs=91.8
Q ss_pred eeeccCC---CCeEEEEEccCCCeEEEEeCCCcEEEEE---CccCcccccccccccCeEEEEEeC--CCCEEEEeceeeE
Q psy9327 3 TKFETKS---ARVKGLSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHN--QQPIFVSGGKMIV 74 (641)
Q Consensus 3 ~~~~~H~---~~V~~l~fspdg~~Lasg~~dg~I~iWD---~~~~~~l~~~~~h~~~V~~i~fsp--~~~~l~sgs~~~~ 74 (641)
+..++|. +.+..+........|+.-+.+|.++--. +..+....-++ ....|..+.- + +.+.++..+
T Consensus 14 r~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T---- 87 (276)
T 3no0_A 14 IPVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLAT---- 87 (276)
T ss_dssp EEGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEE----
T ss_pred eeccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEe----
Confidence 3445553 4566665555566677777777765433 22211100022 2344544433 3 344555554
Q ss_pred EeeeceeeecccCCcceeeEEEeeCCCeEEEEECCC------CeeEEEEccCCCCeEEEEEccCCCEEEEEeCCCeEEEE
Q psy9327 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ------RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148 (641)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t------~~~~~~~~~h~~~V~~v~fsp~~~~l~sgs~Dg~I~vW 148 (641)
.+|.|+-..+.. |.....++. .+.+..+....+...++..+..|.+..+
T Consensus 88 ------------------------~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 88 ------------------------KKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp ------------------------TTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred ------------------------CCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 899998887643 222223332 3556666555566688888899998887
Q ss_pred ECCC---------CeeEEEEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 149 YWQS---------RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 149 d~~~---------~~~i~~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+... |.....+. ..+.|.++...+++..++..+..|.++...+..
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred EhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 6532 11222233 246677766666677888889999988887754
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=29.65 E-value=6.4e+02 Score=28.26 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=35.2
Q ss_pred CCCeEEEEEccCC-CeEEEEeCCCcEEEEECccCcccccccc-------cccCeEEEEEeCCC
Q psy9327 9 SARVKGLSFHPKR-PWILSSLHNGVIQLWDYRMNTLLEKFDE-------HEGPVRGICFHNQQ 63 (641)
Q Consensus 9 ~~~V~~l~fspdg-~~Lasg~~dg~I~iWD~~~~~~l~~~~~-------h~~~V~~i~fsp~~ 63 (641)
.++|.+|+++|.. ..+++++..|.|...+ +.|+.-..+.. ....|.+|+++|..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~ 75 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNN 75 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCC
Confidence 4689999999963 4667777777776655 33433222222 23479999999854
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=28.79 E-value=4.3e+02 Score=26.04 Aligned_cols=145 Identities=7% Similarity=0.005 Sum_probs=80.5
Q ss_pred cCCCeEEEEeCCCcEEEEECccC----cccccccccccCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeE
Q psy9327 19 PKRPWILSSLHNGVIQLWDYRMN----TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIK 94 (641)
Q Consensus 19 pdg~~Lasg~~dg~I~iWD~~~~----~~l~~~~~h~~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~ 94 (641)
|+.+++++.+.+|.|+--....- ..-..++..+.-+..+.-+.....++..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT------------------------- 57 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFT------------------------- 57 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEE-------------------------
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEE-------------------------
Confidence 56778899999999987764321 1111233333333333333333344433
Q ss_pred EEeeCCCeEEEE---ECC------CCeeEEE---EccCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEECCC------C
Q psy9327 95 SVLGDDYKIKVW---NYK------QRKCIFT---LLGHLDYIRTTFFHH---EYPWILSASDDQTIRIWYWQS------R 153 (641)
Q Consensus 95 ~~~s~Dg~I~vW---D~~------t~~~~~~---~~~h~~~V~~v~fsp---~~~~l~sgs~Dg~I~vWd~~~------~ 153 (641)
+.|.+.-. ++. .|.++.. +. ....|.++...+ ++.+++.++.+|.++-..+.. +
T Consensus 58 ----~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~ 132 (323)
T 1wp5_A 58 ----NKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYS 132 (323)
T ss_dssp ----TTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCS
T ss_pred ----CCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhcccc
Confidence 55654433 332 2332211 22 233455543333 266899999999999987631 1
Q ss_pred eeEE--EEccCCCCEEEEEEecCCCEEEEEeCCCeEEEEecCC
Q psy9327 154 NCIC--VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194 (641)
Q Consensus 154 ~~i~--~l~~h~~~V~sl~fsp~g~~lvSgs~DgtI~IWD~~~ 194 (641)
+-+. .+.. .+.+..+......+.++..+.+|.+..++...
T Consensus 133 ~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 133 KPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESE 174 (323)
T ss_dssp SCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGG
T ss_pred CceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHH
Confidence 1122 2332 35666666555566788888899888887764
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.22 E-value=1.6e+02 Score=32.10 Aligned_cols=71 Identities=6% Similarity=0.011 Sum_probs=41.7
Q ss_pred CeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccCC-CCeEEEEEcc
Q psy9327 53 PVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL-DYIRTTFFHH 131 (641)
Q Consensus 53 ~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h~-~~V~~v~fsp 131 (641)
..-.|+|+|.|.++++-... ..... . ...-....+.+.+..+++....+.++. ..+++++|+|
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~--------~~~~~------~--~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGD--------SSNAG------D--FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp CEEEEEECTTCCEEEEECCC--------CCCSG------G--GTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred CCcceEECCCCCEEEEecCC--------Ccccc------c--ccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 34679999999977765400 00000 0 000012235555666777666665544 5799999999
Q ss_pred CCCEEEEE
Q psy9327 132 EYPWILSA 139 (641)
Q Consensus 132 ~~~~l~sg 139 (641)
|++.|+..
T Consensus 541 Dg~tlfvn 548 (592)
T 3zwu_A 541 DQKTLFVG 548 (592)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 98866654
No 373
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.63 E-value=2.2e+02 Score=30.95 Aligned_cols=61 Identities=8% Similarity=-0.007 Sum_probs=43.4
Q ss_pred CCeEEEEEccCCCEEEEEeC------------CCeEEEEECCCCeeEEEEccC-CCCEEEEEEecCCCEEEEEe
Q psy9327 122 DYIRTTFFHHEYPWILSASD------------DQTIRIWYWQSRNCICVLTGH-NHYVMCAQFHPTDDIVVSAS 182 (641)
Q Consensus 122 ~~V~~v~fsp~~~~l~sgs~------------Dg~I~vWd~~~~~~i~~l~~h-~~~V~sl~fsp~g~~lvSgs 182 (641)
.....|.|.++|.+.++... ...|..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34678999999987763321 125777777778766656543 35789999999998877664
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=27.39 E-value=1.7e+02 Score=31.85 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=41.5
Q ss_pred eEEEEEccCCCEEEEEeCC------------CeEEEEECCCCeeEEEEccC-CCCEEEEEEecCCCEEEEE
Q psy9327 124 IRTTFFHHEYPWILSASDD------------QTIRIWYWQSRNCICVLTGH-NHYVMCAQFHPTDDIVVSA 181 (641)
Q Consensus 124 V~~v~fsp~~~~l~sgs~D------------g~I~vWd~~~~~~i~~l~~h-~~~V~sl~fsp~g~~lvSg 181 (641)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++....+.++ ...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4668999999966654332 24566677777766666655 4579999999999877765
No 375
>2rqx_A PMRD, polymyxin B resistance protein; signaling protein; NMR {Klebsiella pneumoniae}
Probab=26.83 E-value=24 Score=27.36 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.3
Q ss_pred ceeEEeeCCCCceEEEeCCcchh
Q psy9327 585 NQVYYLDRECSPHVLRIDPTEFK 607 (641)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~ 607 (641)
+--||++|+-.--+--||.++|-
T Consensus 50 dA~YCiNrn~~~tvKii~As~Ys 72 (89)
T 2rqx_A 50 DARYCLNNNPTQTLKIRNATHYS 72 (89)
T ss_dssp SSCEEETTCTTSEEEEEEEESCC
T ss_pred hhhhhhcCCCCceEEEEeccccC
Confidence 44689999998888889999885
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=25.47 E-value=73 Score=35.70 Aligned_cols=35 Identities=11% Similarity=0.443 Sum_probs=28.1
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEecCCCceeeecc
Q psy9327 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202 (641)
Q Consensus 166 V~sl~fsp~g~~lvSgs~DgtI~IWD~~~~~~~~~~~ 202 (641)
|.++.+ +..++++-+.|.++|+||+.++++..+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 555444 47899999999999999999998776543
No 377
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.18 E-value=5.8e+02 Score=25.92 Aligned_cols=157 Identities=8% Similarity=0.091 Sum_probs=91.4
Q ss_pred CCeEEEEEccCCC-eEE-EEeC-------------CCcEEEEECccC--cccccccc------cccCeEEEEEe---CC-
Q psy9327 10 ARVKGLSFHPKRP-WIL-SSLH-------------NGVIQLWDYRMN--TLLEKFDE------HEGPVRGICFH---NQ- 62 (641)
Q Consensus 10 ~~V~~l~fspdg~-~La-sg~~-------------dg~I~iWD~~~~--~~l~~~~~------h~~~V~~i~fs---p~- 62 (641)
-.|.++...+.+. |++ +|-- --.|.+||+.++ +.++++.- .......+++. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577788877665 333 2211 125789999998 88777643 23467777777 22
Q ss_pred ---CCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEc--------------cC----C
Q psy9327 63 ---QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL--------------GH----L 121 (641)
Q Consensus 63 ---~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~--------------~h----~ 121 (641)
+.++..+. +..+-|.|+|+.+++.-+... +. .
T Consensus 167 ~c~~~~aYItD---------------------------~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~ 219 (381)
T 3q6k_A 167 DCSETFVYITN---------------------------FLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFK 219 (381)
T ss_dssp TSCSEEEEEEE---------------------------TTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEEC
T ss_pred CCCccEEEEEc---------------------------CCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEec
Confidence 23444443 357789999999887655442 10 2
Q ss_pred CCeEEEEEccC----CCEEEEEeCCCeEEEEECC-----CC---eeEEEE--ccCCCCEEEEEEe-cCCCEEEEEeCCCe
Q psy9327 122 DYIRTTFFHHE----YPWILSASDDQTIRIWYWQ-----SR---NCICVL--TGHNHYVMCAQFH-PTDDIVVSASLDQT 186 (641)
Q Consensus 122 ~~V~~v~fsp~----~~~l~sgs~Dg~I~vWd~~-----~~---~~i~~l--~~h~~~V~sl~fs-p~g~~lvSgs~Dgt 186 (641)
..+.+++.+|+ +++|.-....+. ++|.+. +. ..+..+ ++....-..+++. .+|.++++--....
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 46788888887 566655444331 223221 11 111112 1111233455665 56777888778888
Q ss_pred EEEEecCC
Q psy9327 187 IRVWDISG 194 (641)
Q Consensus 187 I~IWD~~~ 194 (641)
|..||..+
T Consensus 299 I~~w~~~~ 306 (381)
T 3q6k_A 299 VSCWNTQK 306 (381)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 99998864
No 378
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.96 E-value=3.2e+02 Score=29.71 Aligned_cols=72 Identities=7% Similarity=0.013 Sum_probs=42.9
Q ss_pred cCeEEEEEeCCCCEEEEeceeeEEeeeceeeecccCCcceeeEEEeeCCCeEEEEECCCCeeEEEEccC-CCCeEEEEEc
Q psy9327 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH-LDYIRTTFFH 130 (641)
Q Consensus 52 ~~V~~i~fsp~~~~l~sgs~~~~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~I~vWD~~t~~~~~~~~~h-~~~V~~v~fs 130 (641)
.....|.|.++|.+.++.... +...+ ... +.....+..++..+++....+.+. ...+++++|+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~--~~~~g-----~~~---------~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGD--SSNAG-----DFA---------GMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCC--CCCSG-----GGT---------TCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred CCCCceEECCCCCEEEEeCCC--cCccc-----ccc---------ccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 345779999998877754300 00000 000 001235667777778766555543 3578999999
Q ss_pred cCCCEEEEE
Q psy9327 131 HEYPWILSA 139 (641)
Q Consensus 131 p~~~~l~sg 139 (641)
||++.|+.+
T Consensus 540 PD~ktLfV~ 548 (592)
T 4a9v_A 540 PDQKTLFVG 548 (592)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 999877665
No 379
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=21.06 E-value=62 Score=28.51 Aligned_cols=40 Identities=15% Similarity=0.315 Sum_probs=29.4
Q ss_pred ceeEEeeCCCCceEEEeCCcchhhhHHHhccChhHHHHhhhcCccchh
Q psy9327 585 NQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGQ 632 (641)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (641)
..+|.+|++|+++...+.+-- .-+.++||+|+.++. |.||
T Consensus 122 p~tflID~~G~I~~~~~~~~~------~~~~~~~eil~~l~~--l~~e 161 (164)
T 4gqc_A 122 RAVFIVKPDGTVAYKWVTDNP------LNEPDYDEVVREANK--IAGE 161 (164)
T ss_dssp CEEEEECTTSBEEEEEECSCT------TCCCCHHHHHHHHHH--HHHH
T ss_pred eEEEEECCCCEEEEEEEeCCC------CCCCCHHHHHHHHHH--Hhcc
Confidence 457999999999988876531 223479999998863 5665
No 380
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=20.46 E-value=1.2e+02 Score=28.11 Aligned_cols=59 Identities=10% Similarity=0.069 Sum_probs=41.9
Q ss_pred CCCeEEEEECCCCeeEEEEccCCCCeEEEEEcc---CCCEEEEEeCCCeEEEEECCCCeeEEEEc
Q psy9327 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH---EYPWILSASDDQTIRIWYWQSRNCICVLT 160 (641)
Q Consensus 99 ~Dg~I~vWD~~t~~~~~~~~~h~~~V~~v~fsp---~~~~l~sgs~Dg~I~vWd~~~~~~i~~l~ 160 (641)
.+|.|++-+.++++|+..+.. .+....... ...|=+.-+.+|.|.|=++.+++|+.+..
T Consensus 106 p~G~VqFvN~~TgtCL~ay~n---Gvv~~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 106 HREYFRFVNQSLGTCVEAYGN---GLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp STTCEEEEETTTCCEEEEETT---EEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred CCCEEEEEECCCCceeeeccC---CeEEecCCCCCcccEEEEecCCCccEEEEECCCCccCCccC
Confidence 799999999999999988653 232222221 13355556678888888999999998754
Done!