Your job contains 1 sequence.
>psy9327
MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH
NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH
LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS
ASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM
EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV
YYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTS
LAYLTAATHGLSEEAAELESNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVS
KSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGP
GIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEE
AKQIINICKEYIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLR
IDPTEFKFKLALINHKYEEVLHIVRNSRLVGQSIIAYLQQK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9327
(641 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 575 3.8e-168 4
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 575 3.8e-168 4
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 579 4.6e-168 4
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 575 7.8e-168 4
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 575 1.3e-167 4
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 554 2.4e-165 4
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 576 3.0e-162 4
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 575 2.1e-150 4
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 575 3.0e-150 4
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 581 3.8e-138 3
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 559 1.4e-118 3
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 515 1.8e-106 3
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 500 1.6e-104 3
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 501 8.8e-99 3
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 505 1.7e-90 3
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 456 1.6e-87 3
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 467 6.5e-87 3
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 454 3.1e-81 3
RGD|1310525 - symbol:Copa "coatomer protein complex subun... 380 1.4e-55 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 208 1.1e-16 2
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 216 2.5e-16 2
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 204 4.2e-16 3
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 220 4.3e-16 2
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 206 1.7e-15 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 220 1.9e-15 2
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 207 2.1e-15 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 220 2.4e-15 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 220 2.4e-15 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 220 2.4e-15 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 220 2.4e-15 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 220 2.4e-15 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 220 2.4e-15 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 220 2.4e-15 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 220 2.4e-15 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 220 2.4e-15 2
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 211 2.9e-15 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 219 3.2e-15 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 206 3.3e-15 2
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 206 3.6e-15 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 206 3.6e-15 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 206 3.6e-15 2
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 206 3.6e-15 2
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 206 3.6e-15 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 206 3.6e-15 2
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 206 3.7e-15 2
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 219 4.1e-15 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 214 1.9e-14 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 216 2.7e-14 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 196 3.0e-14 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 213 5.4e-14 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 186 1.6e-13 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 186 1.6e-13 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 202 4.3e-13 1
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 208 4.6e-13 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 200 6.8e-13 1
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 182 7.3e-13 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 191 7.7e-13 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 198 8.2e-13 1
UNIPROTKB|P40765 - symbol:COPA "Coatomer subunit alpha" s... 179 9.2e-13 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 197 1.6e-12 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 196 1.9e-12 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 194 2.4e-12 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 191 2.9e-12 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 191 3.1e-12 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 194 3.2e-12 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 192 5.3e-12 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 187 6.9e-12 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 187 1.0e-11 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 187 1.0e-11 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 187 1.0e-11 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 187 1.0e-11 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 187 1.0e-11 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 187 1.0e-11 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 192 1.7e-11 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 178 2.1e-11 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 191 2.1e-11 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 185 3.5e-11 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 194 3.6e-11 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 182 5.7e-11 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 182 5.7e-11 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 162 6.2e-11 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 162 6.2e-11 1
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 185 8.1e-11 1
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 185 1.0e-10 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 178 1.0e-10 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 177 1.4e-10 1
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 183 1.9e-10 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 181 1.9e-10 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 177 1.9e-10 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 181 2.3e-10 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 181 2.3e-10 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 181 2.3e-10 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 181 2.3e-10 1
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 176 5.3e-10 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 176 5.3e-10 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 176 5.6e-10 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 176 5.6e-10 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 171 5.7e-10 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 176 5.9e-10 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 176 5.9e-10 1
WARNING: Descriptions of 453 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 575 (207.5 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 519 (187.8 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK++ LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 6.0e-153, Sum P(4) = 6.0e-153
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 380 (138.8 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 73/131 (55%), Positives = 96/131 (73%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + ++P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVVQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQL+T GKF DA+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLSTVGKFEDAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 377 (137.8 bits), Expect = 2.0e-91, Sum P(2) = 2.0e-91
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 253 (94.1 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 191 (72.3 bits), Expect = 1.6e-127, Sum P(4) = 1.6e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 4.0e-119, Sum P(4) = 4.0e-119
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 68 (29.0 bits), Expect = 1.3e-114, Sum P(4) = 1.3e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 8.9e-114, Sum P(4) = 8.9e-114
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 44 (20.5 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 587
LL+ K EI + Q+ N C E + GT ++ + + D + + + +K ++V
Sbjct: 435 LLIKNLKNEITKKIQVPN-CDEIFYAGTGNL--LLRDADSITLFDVQQKRTLASVKISKV 491
Query: 588 YYLDRECS-PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y+ HV + K + + N K + + +I N R+
Sbjct: 492 KYVIWSADMSHVALLA----KHAIVICNRKLDALCNIHENIRV 530
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 575 (207.5 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 516 (186.7 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 6.2e-153, Sum P(4) = 6.2e-153
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 380 (138.8 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGIPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 371 (135.7 bits), Expect = 8.4e-91, Sum P(2) = 8.4e-91
Identities = 68/87 (78%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 256 (95.2 bits), Expect = 3.8e-168, Sum P(4) = 3.8e-168
Identities = 53/98 (54%), Positives = 68/98 (69%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLR-TADPNA-TLPTVH 395
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG NL+ T DP T+P +
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAE----NLKETFDPEKETIPDID 789
Query: 396 PEAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
P A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 790 PNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 191 (72.3 bits), Expect = 1.7e-127, Sum P(4) = 1.7e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 4.1e-119, Sum P(4) = 4.1e-119
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 68 (29.0 bits), Expect = 1.3e-114, Sum P(4) = 1.3e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 9.2e-114, Sum P(4) = 9.2e-114
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 47 (21.6 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKY----AIVNGDHGIIRTLDLPIYITKIK 583
LL+ K EI + Q+ N C E + GT ++ +I D RTL + I+K+K
Sbjct: 435 LLIKNLKNEITKKVQVPN-CDEIFYAGTGNLLLRDAESITLFDVQQKRTL-ASVKISKVK 492
Query: 584 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y + HV + K + + N K E + +I N R+
Sbjct: 493 ----YVIWSADMSHVALLA----KHAIVICNRKLEALCNIHENIRV 530
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 579 (208.9 bits), Expect = 4.6e-168, Sum P(4) = 4.6e-168
Identities = 111/175 (63%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHPT+D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 519 (187.8 bits), Expect = 4.6e-168, Sum P(4) = 4.6e-168
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK++ LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 432 (157.1 bits), Expect = 2.6e-152, Sum P(4) = 2.6e-152
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVW 162
Score = 378 (138.1 bits), Expect = 4.6e-168, Sum P(4) = 4.6e-168
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 377 (137.8 bits), Expect = 7.2e-92, Sum P(2) = 7.2e-92
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 250 (93.1 bits), Expect = 4.6e-168, Sum P(4) = 4.6e-168
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEG+ + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGK 827
Score = 190 (71.9 bits), Expect = 6.8e-127, Sum P(4) = 6.8e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 110 (43.8 bits), Expect = 1.7e-118, Sum P(4) = 1.7e-118
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPTEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 68 (29.0 bits), Expect = 4.3e-114, Sum P(4) = 4.3e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 3.0e-113, Sum P(4) = 3.0e-113
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 45 (20.9 bits), Expect = 7.1e-57, Sum P(2) = 7.1e-57
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 587
LL+ K EI + Q+ N C E + GT ++ + + D + + + +K ++V
Sbjct: 435 LLIKNLKNEITKKVQVPN-CDEIFYAGTGNL--LLRDADSITLFDVQQKRTLASVKISKV 491
Query: 588 YYLDRECS-PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y+ HV + K + + N K + + +I N R+
Sbjct: 492 KYVIWSADMSHVALLA----KHAIVICNRKLDALCNIHENIRV 530
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 575 (207.5 bits), Expect = 7.8e-168, Sum P(4) = 7.8e-168
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 516 (186.7 bits), Expect = 7.8e-168, Sum P(4) = 7.8e-168
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 1.3e-152, Sum P(4) = 1.3e-152
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 380 (138.8 bits), Expect = 7.8e-168, Sum P(4) = 7.8e-168
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 371 (135.7 bits), Expect = 8.4e-91, Sum P(2) = 8.4e-91
Identities = 68/87 (78%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 253 (94.1 bits), Expect = 7.8e-168, Sum P(4) = 7.8e-168
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 191 (72.3 bits), Expect = 3.4e-127, Sum P(4) = 3.4e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 8.5e-119, Sum P(4) = 8.5e-119
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 68 (29.0 bits), Expect = 2.7e-114, Sum P(4) = 2.7e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 1.9e-113, Sum P(4) = 1.9e-113
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 47 (21.6 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKY----AIVNGDHGIIRTLDLPIYITKIK 583
LL+ K EI + Q+ N C E + GT ++ +I D RTL + I+K+K
Sbjct: 435 LLIKNLKNEITKKVQVPN-CDEIFYAGTGNLLLRDAESITLFDVQQKRTL-ASVKISKVK 492
Query: 584 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y + HV + K + + N K E + +I N R+
Sbjct: 493 ----YVIWSADMSHVALLA----KHAIVICNRKLEALCNIHENIRV 530
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 575 (207.5 bits), Expect = 1.3e-167, Sum P(4) = 1.3e-167
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 519 (187.8 bits), Expect = 1.3e-167, Sum P(4) = 1.3e-167
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK++ LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 2.0e-152, Sum P(4) = 2.0e-152
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 379 (138.5 bits), Expect = 1.3e-167, Sum P(4) = 1.3e-167
Identities = 73/131 (55%), Positives = 96/131 (73%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + ++P R K G+K
Sbjct: 934 GSFETAMRLLHDQVGVIQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLK 993
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 994 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1052
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1053 LITICREYIVG 1063
Score = 377 (137.8 bits), Expect = 2.0e-91, Sum P(2) = 2.0e-91
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 249 (92.7 bits), Expect = 1.3e-167, Sum P(4) = 1.3e-167
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYL+AATHG T DP T+P + P
Sbjct: 734 QNALYLGDVSERVRILKNCGQKSLAYLSAATHGLDEEAESLK---ETFDPEKETIPDIDP 790
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 791 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 827
Score = 191 (72.3 bits), Expect = 5.4e-127, Sum P(4) = 5.4e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 1.3e-118, Sum P(4) = 1.3e-118
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 68 (29.0 bits), Expect = 4.3e-114, Sum P(4) = 4.3e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 3.0e-113, Sum P(4) = 3.0e-113
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 44 (20.5 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 587
LL+ K EI + Q+ N C E + GT ++ + + D + + + +K ++V
Sbjct: 435 LLIKNLKNEITKKIQVPN-CDEIFYAGTGNL--LLRDADSITLFDVQQKRTLASVKISKV 491
Query: 588 YYLDRECS-PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y+ HV + K + + N K + + +I N R+
Sbjct: 492 KYVIWSADMSHVALLA----KHAIVICNRKLDALCNIHENIRV 530
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 554 (200.1 bits), Expect = 2.4e-165, Sum P(4) = 2.4e-165
Identities = 93/106 (87%), Positives = 103/106 (97%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W WQSR C+C
Sbjct: 60 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVC 119
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
VLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 120 VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 165
Score = 516 (186.7 bits), Expect = 2.4e-165, Sum P(4) = 2.4e-165
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 480 KVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGVFIYTTSNHI 539
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 540 KYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 599
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 600 EVLHMVRNAKLVGQ 613
Score = 378 (138.1 bits), Expect = 2.4e-165, Sum P(4) = 2.4e-165
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 924 GSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPHRNWKDAGLK 983
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQLTT GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 984 -NGVPAVGLKLNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 1042
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 1043 LITICREYIVG 1053
Score = 371 (135.7 bits), Expect = 1.5e-88, Sum P(2) = 1.5e-88
Identities = 68/87 (78%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GD+GIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 536 SNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 595
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 596 RKYDEVLHMVRNAKLVGQSIIAYLQKK 622
Score = 343 (125.8 bits), Expect = 5.6e-143, Sum P(4) = 5.6e-143
Identities = 74/151 (49%), Positives = 92/151 (60%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
+K LSFHPKRPWILSSLHNGVIQLW TL++KFDEH+GPVRGI FH QQP+FVSGG
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 71 --KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVWNYKQRKCIFTL 117
K+ V Y+ C+ R +L DD I+VWN++ R C+ L
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVL 121
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
GH Y+ FH ++SAS DQT+R+W
Sbjct: 122 TGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 152
Score = 253 (94.1 bits), Expect = 2.4e-165, Sum P(4) = 2.4e-165
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG T DP T+P + P
Sbjct: 724 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDP 780
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 781 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 817
Score = 191 (72.3 bits), Expect = 5.1e-127, Sum P(4) = 5.1e-127
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 91 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 150
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 151 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 206
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 207 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 266
Query: 191 DIS 193
D+S
Sbjct: 267 DMS 269
Score = 144 (55.7 bits), Expect = 4.4e-122, Sum P(4) = 4.4e-122
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+R FH + P +S DD I++W ++ R C+ L GH Y+ FH ++SAS
Sbjct: 44 VRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASD 103
Query: 184 DQTIRVWD 191
DQTIRVW+
Sbjct: 104 DQTIRVWN 111
Score = 111 (44.1 bits), Expect = 1.3e-118, Sum P(4) = 1.3e-118
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 133 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 190
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 191 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 249
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 250 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 291
Score = 92 (37.4 bits), Expect = 1.3e-116, Sum P(4) = 1.3e-116
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ KF+ V+G+ FH ++P +S + I++W+Y++ L H +R FH
Sbjct: 33 LIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFH 92
Query: 61 NQQPIFVS 68
++ P +S
Sbjct: 93 HEYPWILS 100
Score = 85 (35.0 bits), Expect = 6.8e-116, Sum P(4) = 6.8e-116
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
FH + PWILS+ + I++W I H+ V FH + VS D I+
Sbjct: 7 FHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIK 66
Query: 189 VWDISGLRK 197
VW+ LR+
Sbjct: 67 VWNYK-LRR 74
Score = 68 (29.0 bits), Expect = 4.1e-114, Sum P(4) = 4.1e-114
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 247 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 306
Score = 60 (26.2 bits), Expect = 2.8e-113, Sum P(4) = 2.8e-113
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 198 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 255
Query: 68 SGGK 71
S +
Sbjct: 256 SNSE 259
Score = 47 (21.6 bits), Expect = 2.1e-54, Sum P(2) = 2.1e-54
Identities = 29/106 (27%), Positives = 46/106 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKY----AIVNGDHGIIRTLDLPIYITKIK 583
LL+ K EI + Q+ N C E + GT ++ +I D RTL + I+K+K
Sbjct: 425 LLIKNLKNEITKKVQVPN-CDEIFYAGTGNLLLRDAESITLFDVQQKRTL-ASVKISKVK 482
Query: 584 GNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y + HV + K + + N K E + +I N R+
Sbjct: 483 ----YVIWSADMSHVALLA----KHAIVICNRKLEALCNIHENIRV 520
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 576 (207.8 bits), Expect = 3.0e-162, Sum P(4) = 3.0e-162
Identities = 111/175 (63%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 507 (183.5 bits), Expect = 3.0e-162, Sum P(4) = 3.0e-162
Identities = 91/135 (67%), Positives = 112/135 (82%)
Query: 212 KSKHPIWKY-CKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270
K K+ +W C+P + KH + ICN+K+E LCNIHEN RVKSGAW E+ VFIYTTSNH
Sbjct: 491 KVKYVVWSSDCQPREPLLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEVFIYTTSNH 550
Query: 271 IKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKY 330
IKYA+ +GDHGIIRTLDLPIY+T+++GN VY LDREC P VL IDPTE++FKLAL+N KY
Sbjct: 551 IKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLDIDPTEYRFKLALVNRKY 610
Query: 331 EEVLHIVRNSRLVGE 345
EEVLH+VRN++LVG+
Sbjct: 611 EEVLHMVRNAKLVGQ 625
Score = 432 (157.1 bits), Expect = 8.6e-147, Sum P(4) = 8.6e-147
Identities = 89/162 (54%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I++W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 369 (135.0 bits), Expect = 1.1e-90, Sum P(2) = 1.1e-90
Identities = 66/87 (75%), Positives = 80/87 (91%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ +GDHGIIRTLDLPIY+T+++GN VY LDREC P VL IDPTE++FKLAL+N
Sbjct: 548 SNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLDIDPTEYRFKLALVN 607
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KYEEVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 608 RKYEEVLHMVRNAKLVGQSIIAYLQKK 634
Score = 360 (131.8 bits), Expect = 3.0e-162, Sum P(4) = 3.0e-162
Identities = 71/131 (54%), Positives = 95/131 (72%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+F+ + + RT Y LP L + +FP R K G K
Sbjct: 936 GSFETAMRLLHDQVGVVQFGPYKQLFMQTLSRGRTCYLGLPSLPCLHSFPLRNWKDSGPK 995
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
PA ++L LI+++QQCYQLTTSG+F DA+E+ R +L+S+PLLVV K+EI EA+Q
Sbjct: 996 -GGLPAVGLRLADLISRLQQCYQLTTSGRFEDAVERFRAILLSVPLLVVDNKQEIAEAQQ 1054
Query: 544 IINICKEYIVG 554
+I ICKEYI+G
Sbjct: 1055 LITICKEYIIG 1065
Score = 228 (85.3 bits), Expect = 3.0e-162, Sum P(4) = 3.0e-162
Identities = 47/86 (54%), Positives = 57/86 (66%)
Query: 343 VGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTAD-PNATLPTVHPEAQLL 401
+G+V ER++ILK+CGQ SLAYLTAATHG T D +P V P AQLL
Sbjct: 741 LGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALK---ETFDLEKEMVPEVDPNAQLL 797
Query: 402 RPPAPVAEAETNWPLLTVSKSFFEGS 427
+PP P+ +TNWPLLTVSK FFEG+
Sbjct: 798 QPPPPINPLDTNWPLLTVSKGFFEGA 823
Score = 183 (69.5 bits), Expect = 1.2e-120, Sum P(4) = 1.2e-120
Identities = 51/184 (27%), Positives = 84/184 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLF--RIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHH 131
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVDTEVRGISGVD----LFGASDAVVKHVLEQGHDRGVNWAAFHP 216
Query: 132 EYPWILSASDDQTIRIWYWQSRNC--ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
P I+S +DD+ ++IW + GH + V CA FHP ++++S S D++IRV
Sbjct: 217 SMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRV 276
Query: 190 WDIS 193
WD+S
Sbjct: 277 WDMS 280
Score = 104 (41.7 bits), Expect = 2.4e-112, Sum P(4) = 2.4e-112
Identities = 41/205 (20%), Positives = 84/205 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDY----RMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
FHP ++S+ + +++WD + N D + G+ V +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTEVRGISGVDLFGASDAVVK--HV 200
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFH 130
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEQGHDRGVNWAAFHPSMPLIVSG-ADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFH 259
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
ILS S+D++IR+W R + H+ + + HP ++ +A D + V
Sbjct: 260 PRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGA-HPNLNLF-AAGHDSGMLV 317
Query: 190 WDISGLRKKNVAPGMGKLVLSMKSK 214
+ + R++ G ++ +K +
Sbjct: 318 FKLE--RERPAYAVYGNMLYYVKDR 340
Score = 62 (26.9 bits), Expect = 5.9e-108, Sum P(4) = 5.9e-108
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 209 VNWAAFHPSMPLIVSGADDRQVKIW--RMNESKAWELDTCRGHYNNVSCAVFHPRQELIL 266
Query: 68 SGGK 71
S +
Sbjct: 267 SNSE 270
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 575 (207.5 bits), Expect = 2.1e-150, Sum P(4) = 2.1e-150
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 523 (189.2 bits), Expect = 2.1e-150, Sum P(4) = 2.1e-150
Identities = 97/134 (72%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 3.5e-135, Sum P(4) = 3.5e-135
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 385 (140.6 bits), Expect = 2.1e-150, Sum P(4) = 2.1e-150
Identities = 74/131 (56%), Positives = 98/131 (74%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV NF PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 879 GSFETAMRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPTMYGYPHRNWKEAGLK 938
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N+ PA +KL LI ++Q CYQLTT+GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 939 -NALPAVGLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 997
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 998 LIAICREYIVG 1008
Score = 377 (137.8 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 191 (72.3 bits), Expect = 8.6e-110, Sum P(4) = 8.6e-110
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 2.1e-101, Sum P(4) = 2.1e-101
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 73 (30.8 bits), Expect = 2.1e-150, Sum P(4) = 2.1e-150
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 338 RNSRLVGEVGERIKILKSCGQTS--LAYLTAATHGXXXXXXXXXXNLRTAD 386
+N+ +G+V ER++IL++CGQ++ L L+ A G ++ AD
Sbjct: 734 QNALYLGDVAERVRILRNCGQSNSELTCLSLALEGEFCEMTTNEKEVKLAD 784
Score = 68 (29.0 bits), Expect = 6.6e-97, Sum P(4) = 6.6e-97
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 4.5e-96, Sum P(4) = 4.5e-96
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 46 (21.3 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 587
+L+ K EI + Q+ N C E + GT ++ + + D + + + +K ++V
Sbjct: 435 ILIKNLKNEITKKVQVPN-CDEIFYAGTGNL--LLRDADSITLFDVQQKRTLASVKISKV 491
Query: 588 YYLDRECS-PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y+ HV + K + + N K E + +I N R+
Sbjct: 492 KYVIWSADMSHVALLA----KHAIMICNRKLESLCNIHENIRV 530
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 575 (207.5 bits), Expect = 3.0e-150, Sum P(4) = 3.0e-150
Identities = 110/175 (62%), Positives = 132/175 (75%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL----ESRNEPCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ C L + + P F
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYK R+C+FTLLGHLDYIRTTFFHHEYPWILSASDDQTIR+W
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
WQSR C+CVLTGHNHYVMCAQFHP++D+VVSASLDQT+RVWDISGLRKKN++PG
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Score = 523 (189.2 bits), Expect = 3.0e-150, Sum P(4) = 3.0e-150
Identities = 97/134 (72%), Positives = 109/134 (81%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K K+ IW KH + ICNRK+E LCNIHEN RVKSGAWDESGVFIYTTSNHI
Sbjct: 490 KVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGVFIYTTSNHI 549
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN KY+
Sbjct: 550 KYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYD 609
Query: 332 EVLHIVRNSRLVGE 345
EVLH+VRN++LVG+
Sbjct: 610 EVLHMVRNAKLVGQ 623
Score = 433 (157.5 bits), Expect = 5.2e-135, Sum P(4) = 5.2e-135
Identities = 90/162 (55%), Positives = 108/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQLWDYRM TL++KFDEH+GPVRGI FH
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQ--GCILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
QQP+FVSGG K+ V Y+ C+ R +L DD I+VW
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R C+ L GH Y+ FH ++SAS DQT+R+W
Sbjct: 121 NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVW 162
Score = 385 (140.6 bits), Expect = 3.0e-150, Sum P(4) = 3.0e-150
Identities = 74/131 (56%), Positives = 98/131 (74%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV NF PY+Q+FL +Y + RT Y LP L + +P R K G+K
Sbjct: 844 GSFETAMRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPTMYGYPHRNWKEAGLK 903
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N+ PA +KL LI ++Q CYQLTT+GKF +A+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 904 -NALPAVGLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQ 962
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 963 LIAICREYIVG 973
Score = 377 (137.8 bits), Expect = 1.2e-91, Sum P(2) = 1.2e-91
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYA+ GDHGIIRTLDLPIY+T++KGN VY LDREC P VL IDPTEFKFKLALIN
Sbjct: 546 SNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALIN 605
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN++LVGQSIIAYLQ+K
Sbjct: 606 RKYDEVLHMVRNAKLVGQSIIAYLQKK 632
Score = 191 (72.3 bits), Expect = 1.3e-109, Sum P(4) = 1.3e-109
Identities = 53/183 (28%), Positives = 84/183 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH + PWILS+ + I++W+++ T + H V FH + + VS V
Sbjct: 101 FHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVR 160
Query: 76 AYQGCILESRN-EPCLFR--IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ L +N P ++ + G D ++ L GH + FH
Sbjct: 161 VWDISGLRKKNLSPGAVESDVRGITGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQTIRVW 190
P I+S +DD+ ++IW V T HY V CA FHP ++++S S D++IRVW
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 191 DIS 193
D+S
Sbjct: 277 DMS 279
Score = 111 (44.1 bits), Expect = 3.1e-101, Sum P(4) = 3.1e-101
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKF---DEHEGPVRGICFHNQQPIFVSGGKMI 73
FHP ++S+ + +++WD ++ L +K E VRGI + + K +
Sbjct: 143 FHPSEDLVVSASLDQTVRVWD--ISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHV 200
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+ + + + P + I S DD ++K+W + K + T GH + + FH
Sbjct: 201 LEGHDRGVNWAAFHPTMPLIVSG-ADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHP 259
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHP 173
ILS S+D++IR+W R + H+ + + A HP
Sbjct: 260 RQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAA-HP 301
Score = 70 (29.7 bits), Expect = 3.0e-150, Sum P(4) = 3.0e-150
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAY 363
+N+ +G+V ER++IL++CGQ + Y
Sbjct: 734 QNALYLGDVAERVRILRNCGQNNKGY 759
Score = 68 (29.0 bits), Expect = 9.9e-97, Sum P(4) = 9.9e-97
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG--GKMIV 74
FHP++ ILS+ + I++WD T ++ F + H +F +G G MIV
Sbjct: 257 FHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIV 316
Score = 60 (26.2 bits), Expect = 6.8e-96, Sum P(4) = 6.8e-96
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGI-C--FHNQQPIFV 67
V +FHP P I+S + +++W RMN + + D G + C FH +Q + +
Sbjct: 208 VNWAAFHPTMPLIVSGADDRQVKIW--RMNESKAWEVDTCRGHYNNVSCAVFHPRQELIL 265
Query: 68 SGGK 71
S +
Sbjct: 266 SNSE 269
Score = 46 (21.3 bits), Expect = 9.6e-57, Sum P(2) = 9.6e-57
Identities = 23/103 (22%), Positives = 45/103 (43%)
Query: 529 LLVVTTKKEIEEAKQIINICKE-YIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQV 587
+L+ K EI + Q+ N C E + GT ++ + + D + + + +K ++V
Sbjct: 435 ILIKNLKNEITKKVQVPN-CDEIFYAGTGNL--LLRDADSITLFDVQQKRTLASVKISKV 491
Query: 588 YYLDRECS-PHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRL 629
Y+ HV + K + + N K E + +I N R+
Sbjct: 492 KYVIWSADMSHVALLA----KHAIMICNRKLESLCNIHENIRV 530
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 581 (209.6 bits), Expect = 3.8e-138, Sum P(3) = 3.8e-138
Identities = 119/188 (63%), Positives = 137/188 (72%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILESRNE---PC---LFR 92
+L F+ V+G+ FH ++P I VS G + + Y+ +LE +E P F
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYKQR+CIFTLL HLDY+RT FHHEYPWILSASDDQTIRIW
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
WQSRNCICVLTGHNHYVMCAQFHPT+D +VSASLDQT+RVWDISGLRKKNVAPG G L
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLD 180
Query: 209 LSMKSKHP 216
+K HP
Sbjct: 181 DHLKG-HP 187
Score = 490 (177.5 bits), Expect = 3.8e-138, Sum P(3) = 3.8e-138
Identities = 91/142 (64%), Positives = 114/142 (80%)
Query: 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVF 263
+G + L+ K ++ +W + KH++ IC+R+++ LC + EN RVKSGAWDESGVF
Sbjct: 482 VGSIKLA-KCRYVVWSPDMSLVALLCKHSVTICDRRLQYLCTVQENCRVKSGAWDESGVF 540
Query: 264 IYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 323
IYTTSNHIKYAI NGDHGIIRTLDLPIY+T++KGNQV+ LDREC VL IDPTE+KFKL
Sbjct: 541 IYTTSNHIKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLHIDPTEYKFKL 600
Query: 324 ALINHKYEEVLHIVRNSRLVGE 345
ALI KY+EVLH+VRN+RLVG+
Sbjct: 601 ALIQRKYDEVLHMVRNARLVGQ 622
Score = 424 (154.3 bits), Expect = 8.8e-113, Sum P(4) = 8.8e-113
Identities = 89/162 (54%), Positives = 107/162 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLT FE+KSARVKGLSFHPKRPWIL SLH+GVIQLWDYRM+TLLEKFDEH+GPVRG+ FH
Sbjct: 1 MLTNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQG--CILESRNEPCLFRIKS-------VLG--DDYKIKVW 106
Q P+FVSGG K+ V Y+ CI R + +L DD I++W
Sbjct: 61 QQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R CI L GH Y+ FH I+SAS DQT+R+W
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVW 162
Score = 375 (137.1 bits), Expect = 7.5e-92, Sum P(2) = 7.5e-92
Identities = 70/87 (80%), Positives = 79/87 (90%)
Query: 555 TNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALIN 614
+NHIKYAI NGDHGIIRTLDLPIY+T++KGNQV+ LDREC VL IDPTE+KFKLALI
Sbjct: 545 SNHIKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLHIDPTEYKFKLALIQ 604
Query: 615 HKYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+EVLH+VRN+RLVGQSIIAYLQQK
Sbjct: 605 RKYDEVLHMVRNARLVGQSIIAYLQQK 631
Score = 349 (127.9 bits), Expect = 3.8e-138, Sum P(3) = 3.8e-138
Identities = 76/152 (50%), Positives = 99/152 (65%)
Query: 405 APVAEAETNWPLLTVSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYST 464
+P + N PL V GSFETAF+LLHDQ+GV NF P++ +FL +Y SRT+Y+
Sbjct: 925 SPAQQWANNSPL--VLDHVKAGSFETAFRLLHDQLGVVNFQPFKTLFLQNYACSRTSYTA 982
Query: 465 LPLLAPVMAFPTRK--GPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRN 522
P L + +P R IK PA IKL L+A++Q YQLTTSGKF +A+EK +
Sbjct: 983 NPNLQSLSGYPLRNYSETNIKLQ-RPAVGIKLNDLVARLQAGYQLTTSGKFSEAVEKFHS 1041
Query: 523 VLISIPLLVVTTKKEIEEAKQIINICKEYIVG 554
+LISIPLLVV TK + EA+Q++ IC EYIVG
Sbjct: 1042 ILISIPLLVVDTKLDAAEAQQLLRICAEYIVG 1073
Score = 251 (93.4 bits), Expect = 1.1e-129, Sum P(4) = 1.1e-129
Identities = 50/89 (56%), Positives = 64/89 (71%)
Query: 342 LVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLL 401
L+G+V ER+ ILK+CGQ SLAYLTAATHG ++ T+ N+ LP V+P AQLL
Sbjct: 737 LLGDVKERVNILKNCGQLSLAYLTAATHGFDELTESLGESI-TSQGNS-LPEVNPNAQLL 794
Query: 402 RPPAPVAEAETNWPLLTVSKSFFEGSFET 430
+PP P+ + ETNWPLL+VSK FFEG+ T
Sbjct: 795 QPPVPIQQLETNWPLLSVSKGFFEGAMVT 823
Score = 161 (61.7 bits), Expect = 3.0e-85, Sum P(4) = 3.0e-85
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ ++FH + PWILS+ + I++W+++ + H V FH + VS
Sbjct: 96 VRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASL 155
Query: 71 KMIVMAYQGCILESRN-EPCLFRIKSVL-GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
V + L +N P + L G ++ L GH
Sbjct: 156 DQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVVKHVLEGHDRGFNWAS 215
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY--VMCAQFHPTDDIVVSASLDQT 186
FH P I+S +DD+ +++W V T HY V FHP D+++S D++
Sbjct: 216 FHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRS 275
Query: 187 IRVWDIS 193
IRVWD++
Sbjct: 276 IRVWDMT 282
Score = 115 (45.5 bits), Expect = 1.9e-80, Sum P(4) = 1.9e-80
Identities = 43/168 (25%), Positives = 70/168 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ-QP----IFVSGGK 71
FHP I+S+ + +++WD + L K + GP G+ H + P +F
Sbjct: 143 FHPTEDQIVSASLDQTVRVWDI---SGLRKKNVAPGP-GGLDDHLKGHPGATDLFGQADA 198
Query: 72 MIVMAYQGC---ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRT 126
++ +G + P L I S DD +K+W + K + T GH + + +
Sbjct: 199 VVKHVLEGHDRGFNWASFHPTLPLIVSG-ADDRLVKLWRMNEYKAWEVDTCRGHYNNVSS 257
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FH ILS +D++IR+W R C+ N HPT
Sbjct: 258 VLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHPT 305
Score = 59 (25.8 bits), Expect = 1.4e-74, Sum P(4) = 1.4e-74
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG-- 69
V + FHP++ ILS+ + I++WD L F + H +F +G
Sbjct: 255 VSSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGHD 314
Query: 70 GKMIV 74
G M+V
Sbjct: 315 GGMVV 319
Score = 44 (20.5 bits), Expect = 5.8e-57, Sum P(2) = 5.8e-57
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 266 TTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVL 312
TTS A V H I+ ++ L + TK+ + L R C+ +++
Sbjct: 1027 TTSGKFSEA-VEKFHSILISIPLLVVDTKLDAAEAQQLLRICAEYIV 1072
Score = 39 (18.8 bits), Expect = 1.1e-129, Sum P(4) = 1.1e-129
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 567 HGIIRTLDLPIYITKIKGNQVYYLDRECSPHVL 599
H I+ ++ L + TK+ + L R C+ +++
Sbjct: 1040 HSILISIPLLVVDTKLDAAEAQQLLRICAEYIV 1072
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 559 (201.8 bits), Expect = 1.4e-118, Sum P(3) = 1.4e-118
Identities = 110/178 (61%), Positives = 132/178 (74%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQGCIL-ESRNE---P----CL 90
+LL KF+ V+GI FH +P + S G + + Y+ C+L E +E P C
Sbjct: 2 SLLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICF 61
Query: 91 FRIKSVL---GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147
+ + GDDYKIKVWNYKQ++CIFTLLGHLDYIRTTFFHH+YPWI+SASDDQT+RI
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRI 121
Query: 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 205
W WQSRN I +LTGHNHYVMCAQFHPT+D+V SASLDQT+RVWDISGLRKK + PG G
Sbjct: 122 WNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRKKQM-PGGG 178
Score = 405 (147.6 bits), Expect = 3.2e-96, Sum P(3) = 3.2e-96
Identities = 84/162 (51%), Positives = 105/162 (64%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L KFE+KSARVKG+SFHP RPW+L+SLH+GVIQLWDYRM LLEKFDEH+GPVRGICFH
Sbjct: 3 LLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFH 62
Query: 61 NQQPIFVSGG---KMIVMAYQG--CILESRNE-----PCLFRIKS--VLG--DDYKIKVW 106
+ QPIFVSGG K+ V Y+ CI F K ++ DD +++W
Sbjct: 63 HDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIW 122
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R I L GH Y+ FH + SAS DQT+R+W
Sbjct: 123 NWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVW 164
Score = 377 (137.8 bits), Expect = 1.4e-118, Sum P(3) = 1.4e-118
Identities = 72/134 (53%), Positives = 99/134 (73%)
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHI 271
K ++ IW KHTL + NRK+E LC E+TRVKSGAWD+ VF+YTTSNHI
Sbjct: 494 KVRYVIWSKSMEFAALLSKHTLTLVNRKLEILCTQQESTRVKSGAWDDDSVFLYTTSNHI 553
Query: 272 KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYE 331
KYAI +GD GI+RTLDLP+YI I+GN +Y L+R+ +P + ID +++KFKLALIN + +
Sbjct: 554 KYAINSGDCGIVRTLDLPLYILAIRGNVLYCLNRDATPVEVPIDNSDYKFKLALINKRID 613
Query: 332 EVLHIVRNSRLVGE 345
EV+++VR++ LVG+
Sbjct: 614 EVVNMVRSANLVGQ 627
Score = 299 (110.3 bits), Expect = 1.4e-118, Sum P(3) = 1.4e-118
Identities = 66/161 (40%), Positives = 98/161 (60%)
Query: 397 EAQLLRPPAPVAEAETNWPLLT--VSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNS 454
+ +++ PAP +E WP ++ + GSF TA KLLHD IGV P++ +F+ +
Sbjct: 913 DEEVVPNPAPAVSSE--WPNVSRLAADHVAAGSFGTAIKLLHDTIGVVEAAPFKDVFVKA 970
Query: 455 YLQSRTAY---STLPLLAPVMAFPTRKGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSG 511
Y SR ++ L PV P R K N P KL QL K+Q+ YQ+TT+G
Sbjct: 971 YAASRLSHRGWGGLGPAGPVSIHPVRNFQEDK-NHLPVAAFKLSQLAKKLQKAYQMTTNG 1029
Query: 512 KFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYI 552
KF DA+EKLR +L+S+PL+VV++K+E+ EA+Q+I I +EY+
Sbjct: 1030 KFGDAVEKLREILLSVPLIVVSSKQEVAEAEQLITITREYL 1070
Score = 268 (99.4 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 59/134 (44%), Positives = 91/134 (67%)
Query: 510 SGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ-IINICKEYIVGT-NHIKYAIVNGDH 567
S +F + K L++ L ++ T++E K + ++ T NHIKYAI +GD
Sbjct: 503 SMEFAALLSKHTLTLVNRKLEILCTQQESTRVKSGAWDDDSVFLYTTSNHIKYAINSGDC 562
Query: 568 GIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNS 627
GI+RTLDLP+YI I+GN +Y L+R+ +P + ID +++KFKLALIN + +EV+++VR++
Sbjct: 563 GIVRTLDLPLYILAIRGNVLYCLNRDATPVEVPIDNSDYKFKLALINKRIDEVVNMVRSA 622
Query: 628 RLVGQSIIAYLQQK 641
LVGQSII YL++K
Sbjct: 623 NLVGQSIIGYLEKK 636
Score = 196 (74.1 bits), Expect = 9.5e-108, Sum P(3) = 9.5e-108
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 344 GEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRP 403
G+V ER+K+L++CGQTSLAYL AATHG L + +P V P A+LL P
Sbjct: 744 GDVEERVKVLRNCGQTSLAYLAAATHGYSAEAEELKAELESRQQ--PIPPVDPNARLLVP 801
Query: 404 PAPVAEAETNWPLLTVSKSFFE 425
P PVA E NWPLL ++ F+
Sbjct: 802 PPPVARLEENWPLLASARGTFD 823
Score = 174 (66.3 bits), Expect = 2.0e-71, Sum P(3) = 2.0e-71
Identities = 48/183 (26%), Positives = 81/183 (44%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVM 75
FH K PWI+S+ + +++W+++ + H V FH + + S V
Sbjct: 103 FHHKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVR 162
Query: 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
+ L + P G + +++ L GH + FHH P
Sbjct: 163 VWDISGLRKKQMPGGGAPSRPTGGQ-QAELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPI 221
Query: 136 ILSASDDQTIRIW-Y-----WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
++S SDD+ ++IW Y W+ +C GH + V FHP D+++S S D++IRV
Sbjct: 222 LVSGSDDRQVKIWRYNETKAWELDSC----RGHYNNVSSVIFHPNADLILSNSEDKSIRV 277
Query: 190 WDI 192
WD+
Sbjct: 278 WDM 280
Score = 121 (47.7 bits), Expect = 7.3e-66, Sum P(3) = 7.3e-66
Identities = 38/163 (23%), Positives = 67/163 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP + S+ + +++WD ++ L +K G Q +F ++
Sbjct: 145 FHPTEDLVASASLDQTVRVWD--ISGLRKKQMPGGGAPSRPTGGQQAELFGQPDAVVKHV 202
Query: 77 YQGCILESRNEPCLFRIKSVL---GDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHH 131
+G N +L DD ++K+W Y + K + + GH + + + FH
Sbjct: 203 LEGHD-RGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHP 261
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
ILS S+D++IR+W Q R + V N HP+
Sbjct: 262 NADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPS 304
Score = 66 (28.3 bits), Expect = 4.2e-60, Sum P(3) = 4.2e-60
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG-- 69
V + FHP ILS+ + I++WD + T L F + H +F +G
Sbjct: 254 VSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGHD 313
Query: 70 GKMIVMAYQ 78
M+V Q
Sbjct: 314 NGMVVFKIQ 322
Score = 54 (24.1 bits), Expect = 7.5e-59, Sum P(3) = 7.5e-59
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSG 69
V ++FH P ++S + +++W Y L+ H V + FH + +S
Sbjct: 210 VNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLILSN 269
Query: 70 GK 71
+
Sbjct: 270 SE 271
Score = 46 (21.3 bits), Expect = 5.1e-58, Sum P(3) = 5.1e-58
Identities = 28/142 (19%), Positives = 47/142 (33%)
Query: 50 HEGPVRGICFHNQQPIFVSGG---KMIVMAYQ--------GCILESRN-EPCLFRIKSVL 97
H+ V + FH+ PI VSG ++ + Y C N +F + L
Sbjct: 206 HDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADL 265
Query: 98 ----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR 153
+D I+VW+ ++R + + H + D+ + + R
Sbjct: 266 ILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGHDNGMVVFKIQRER 325
Query: 154 NCICVLTGHNHYVMCAQFHPTD 175
CV YV Q D
Sbjct: 326 PAYCVSDNLVFYVKGQQIRKLD 347
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 515 (186.3 bits), Expect = 1.8e-106, Sum P(3) = 1.8e-106
Identities = 102/174 (58%), Positives = 123/174 (70%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILESRNE---PCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ G +++ +E P F
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L GDDYKIKVWNYK +C+FTLLGHLDYIRT FHHEYPWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
WQSR C+ VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI LRKK V+P
Sbjct: 121 NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSP 174
Score = 431 (156.8 bits), Expect = 1.9e-92, Sum P(3) = 1.9e-92
Identities = 87/166 (52%), Positives = 110/166 (66%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFR-------IKSV-----------LGDDYK 102
N QP+FVSGG Y+ + +N CLF I++V DD
Sbjct: 61 NSQPLFVSGGD----DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQT 116
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
I++WN++ R C+ L GH Y+ FH + ++SAS DQT+R+W
Sbjct: 117 IRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 353 (129.3 bits), Expect = 1.8e-106, Sum P(3) = 1.8e-106
Identities = 62/116 (53%), Positives = 88/116 (75%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KHT+ I ++K+ C +HE RVKSGAWD++GVFIYTT NHIKY + NGD GIIRTLD+P
Sbjct: 510 KHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGE 345
IYITK+ GN ++ LDR+ + I+ TE+ FKL+L+ +Y+ V+ +++NS+L G+
Sbjct: 570 IYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMSMIKNSQLCGQ 625
Score = 262 (97.3 bits), Expect = 7.5e-73, Sum P(2) = 7.5e-73
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GIIRTLD+PIYITK+ GN ++ LDR+ + I+ TE+ FKL+L+
Sbjct: 549 NHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
+Y+ V+ +++NS+L GQ++IAYLQQK
Sbjct: 609 RYDHVMSMIKNSQLCGQAMIAYLQQK 634
Score = 253 (94.1 bits), Expect = 1.8e-106, Sum P(3) = 1.8e-106
Identities = 64/186 (34%), Positives = 106/186 (56%)
Query: 403 PPA--PVAEAETNWPLLTVSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRT 460
PP PV+++ + L ++ GSF+TA +LLH Q+G+KNF P + MFL+ + S +
Sbjct: 904 PPQGMPVSQSWSQKSSLAAEQAA-AGSFDTAMRLLHRQLGIKNFTPLKSMFLDLFNGSHS 962
Query: 461 ---AYSTLPL--LAPVMAFPTRKGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVD 515
A+S+ P+ LA + P ++ S PA QL K++ Y+ TT+GKF +
Sbjct: 963 YLRAFSSCPVVPLAIERGWSESSSPNVR--SPPALVYDFSQLDEKLKSGYKATTTGKFTE 1020
Query: 516 AIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTN-HIKYAIVNGDHGIIRTLD 574
A+ ++L +IPL+VV T++E++E K++I I KEY++G +K + D +R +
Sbjct: 1021 ALRLFLSILHTIPLVVVETRREVDEVKELIVIVKEYVLGLQMELKRREMKDDP--VRQQE 1078
Query: 575 LPIYIT 580
L Y T
Sbjct: 1079 LAAYFT 1084
Score = 186 (70.5 bits), Expect = 5.4e-65, Sum P(3) = 5.4e-65
Identities = 48/186 (25%), Positives = 85/186 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ + FH + PWI+S+ + I++W+++ T + H V FH ++ + VS
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 71 KMIVMAYQ-GCILESRNEPC--LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT 127
V + G + + P + R+ + D ++ + L GH +
Sbjct: 156 DQTVRVWDIGALRKKTVSPADDIMRLTQMNSD-----LFGGVDAIVKYVLEGHDRGVNWA 210
Query: 128 FFHHEYPWILSASDDQTIRIWYWQSRNC--ICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
FH P I+S +DD+ +++W + L GH + V FH DI+VS S D+
Sbjct: 211 AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDK 270
Query: 186 TIRVWD 191
+IRVWD
Sbjct: 271 SIRVWD 276
Score = 158 (60.7 bits), Expect = 5.6e-72, Sum P(3) = 5.6e-72
Identities = 82/319 (25%), Positives = 129/319 (40%)
Query: 136 ILSASDDQTIRI--WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+L + +TIR+ W N + + T NH C P D + +LD I + +S
Sbjct: 521 VLQCTLHETIRVKSGAWDD-NGVFIYTTLNHIKYCL---PNGDSGIIRTLDVPIYITKVS 576
Query: 194 G-----LRK--KNVAPGMG------KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240
G L + KN A + KL L K + K + C ++ +K
Sbjct: 577 GNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMSMIKNSQLCGQAMIAYL-QQKG 635
Query: 241 EPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH----GIIRTLDLPIYITK 294
P +H E+ R++ ESG ++ + I DH G+ I +
Sbjct: 636 FPEVALHFVEDERIRFNLALESGNISVAVASATQ--INEKDHWYRLGVEALRQGNSGIVE 693
Query: 295 IKGNQVYYLDRECSPHVL--RIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKI 352
Q +R +++ +D K+A + + H N+ +G+V ER+KI
Sbjct: 694 FAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFH---NALYLGDVKERVKI 750
Query: 353 LKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAET 412
L++ G LAY+TA+ HG L D +LP + LL PP P+
Sbjct: 751 LENAGHLPLAYITASVHGLNDIAERLATEL--GDNVPSLPEGKTPS-LLMPPTPIM-CGG 806
Query: 413 NWPLLTVSKSFFEGSFETA 431
+WPLL V K FEG E+A
Sbjct: 807 DWPLLRVMKGIFEGGLESA 825
Score = 59 (25.8 bits), Expect = 1.0e-51, Sum P(3) = 1.0e-51
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHE 51
V + FH K+ I+S+ + I++WD T L+ F EH+
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHD 291
Score = 37 (18.1 bits), Expect = 2.0e-49, Sum P(3) = 2.0e-49
Identities = 14/63 (22%), Positives = 26/63 (41%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D I+VW+ +R + T D H E +L+A D + ++ +
Sbjct: 268 EDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN-LLAAGHDSGMIVFKLERERPAFA 326
Query: 159 LTG 161
L+G
Sbjct: 327 LSG 329
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 500 (181.1 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 100/174 (57%), Positives = 122/174 (70%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILESRNE---PCL---FR 92
+L KF+ V+G+ FH ++P I S G + + Y+ G +++ +E P F
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L GDDYKIKVWNYK +C+FTLLGHLDYIRT FHHE PWI+SASDDQTIRIW
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
WQSR CI VLTGHNHYVMCA FHP +D+VVSASLDQT+RVWDI L+KK+ +P
Sbjct: 121 NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASP 174
Score = 427 (155.4 bits), Expect = 1.6e-91, Sum P(3) = 1.6e-91
Identities = 88/164 (53%), Positives = 110/164 (67%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFETKS RVKGLSFHPKRPWIL+SLH+GVIQLWDYRM TL+++FDEHEGPVRG+ FH
Sbjct: 1 MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQG--CILESRNEPCLFRIKSV-----------LGDDYKIK 104
N QP+FVSGG K+ V Y+ C+ L I++V DD I+
Sbjct: 61 NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGH--LDYIRTVQFHHENPWIVSASDDQTIR 118
Query: 105 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+WN++ R CI L GH Y+ FH + ++SAS DQT+R+W
Sbjct: 119 IWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 360 (131.8 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 64/116 (55%), Positives = 88/116 (75%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KHT+ I ++K+ C +HE RVKSGAWD++GVFIYTT NHIKY + NGD GIIRTLD+P
Sbjct: 510 KHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVP 569
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGE 345
IYITK+ GN ++ LDR+ + I+ TE+ FKLAL+ KY+ V+ +++NS+L G+
Sbjct: 570 IYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQLCGQ 625
Score = 269 (99.8 bits), Expect = 5.7e-72, Sum P(2) = 5.7e-72
Identities = 49/86 (56%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NHIKY + NGD GIIRTLD+PIYITK+ GN ++ LDR+ + I+ TE+ FKLAL+
Sbjct: 549 NHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRK 608
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
KY+ V+ +++NS+L GQ++IAYLQQK
Sbjct: 609 KYDHVMSMIKNSQLCGQAMIAYLQQK 634
Score = 243 (90.6 bits), Expect = 1.6e-104, Sum P(3) = 1.6e-104
Identities = 62/189 (32%), Positives = 105/189 (55%)
Query: 403 PPA--PVAEAETNWPLLTVSKSFFEGSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRT 460
PP PV++ + L ++ GSF+TA +LLH Q+G+KNF P + MFL+ + S +
Sbjct: 905 PPQGMPVSQIWSQKSSLAAEQAA-AGSFDTAMRLLHRQLGIKNFAPLKSMFLDLFSGSHS 963
Query: 461 ---AYSTLPL--LAPVMAFPTRKGPGIKENSHPATNIKLEQLIAKIQQCYQLTTSGKFVD 515
A+S+ P+ LA + P ++ PA QL AK++ Y+ TT+GK +
Sbjct: 964 YLRAFSSSPVVPLAIERGWSESSSPNVR--GPPALVFDFSQLEAKLKSGYKATTAGKLSE 1021
Query: 516 AIEKLRNVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTN-HIKYAIVNGDHGIIRTLD 574
A+ ++L +IPL+VV +++E++E K+++ I KEY++G +K + D +R +
Sbjct: 1022 ALRVFLSILQTIPLVVVESRREVDEVKELVIIVKEYVLGLQLELKRREMKDDP--VRQQE 1079
Query: 575 LPIYITKIK 583
L Y T K
Sbjct: 1080 LAAYFTHCK 1088
Score = 191 (72.3 bits), Expect = 2.7e-65, Sum P(3) = 2.7e-65
Identities = 49/186 (26%), Positives = 84/186 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ + FH + PWI+S+ + I++W+++ T + H V FH ++ + VS
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 71 KMIVMAYQ-GCILESRNEPC--LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTT 127
V + G + + P L R + D ++ + L GH +
Sbjct: 156 DQTVRVWDIGALKKKSASPADDLMRFSQMNSD-----LFGGVDAIVKYVLEGHDRGVNWA 210
Query: 128 FFHHEYPWILSASDDQTIRIWYWQSRNC--ICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
FH P I+S +DD+ +++W + L GH + V FH DI+VS S D+
Sbjct: 211 SFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDK 270
Query: 186 TIRVWD 191
+IRVWD
Sbjct: 271 SIRVWD 276
Score = 162 (62.1 bits), Expect = 9.4e-71, Sum P(3) = 9.4e-71
Identities = 82/319 (25%), Positives = 130/319 (40%)
Query: 136 ILSASDDQTIRI--WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+L + +TIR+ W N + + T NH C P D + +LD I + +S
Sbjct: 521 VLQCTLHETIRVKSGAWDD-NGVFIYTTLNHIKYCL---PNGDSGIIRTLDVPIYITKVS 576
Query: 194 G-----LRK--KNVAPGMG------KLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM 240
G L + KN A + KL L K + K + C ++ +K
Sbjct: 577 GNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQLCGQAMIAYL-QQKG 635
Query: 241 EPLCNIH--ENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH----GIIRTLDLPIYITK 294
P +H E+ R++ ESG ++ + I DH G+ I +
Sbjct: 636 FPEVALHFVEDERIRFNLALESGNISVAVASATE--INEKDHWYRLGVEALRQGNSRIVE 693
Query: 295 IKGNQVYYLDRECSPHVL--RIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKI 352
Q +R +++ +D K+A + + H N+ +G+V ER+KI
Sbjct: 694 FAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFH---NALYLGDVKERVKI 750
Query: 353 LKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAET 412
L++ G LAY+TA+ HG L D +LP + LL PP+P+
Sbjct: 751 LENAGHLPLAYITASVHGLTDIAERLAIEL--GDNVPSLPEGKTPS-LLMPPSPIM-CGG 806
Query: 413 NWPLLTVSKSFFEGSFETA 431
+WPLL V K FEG E+A
Sbjct: 807 DWPLLRVMKGIFEGGLESA 825
Score = 130 (50.8 bits), Expect = 6.5e-59, Sum P(3) = 6.5e-59
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
SFHPK ++S+ + +++WD + L +K P + +Q + GG ++
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWD--IGALKKK---SASPADDLMRFSQMNSDLFGGVDAIV 196
Query: 76 AYQGCILESRNE--------PCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
Y +LE + P L I S DD ++K+W + K + TL GH++ +
Sbjct: 197 KY---VLEGHDRGVNWASFHPTLPLIVSG-ADDRQVKLWRMNETKAWEVDTLRGHMNNVS 252
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG-HNHYVMCAQFHPTDDIVVS 180
+ FH + I+S S+D++IR+W R I H+ + + A HP +++ +
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILA-VHPEINLLAA 307
Score = 57 (25.1 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHE 51
V + FH K+ I+S+ + I++WD T ++ F EH+
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHD 291
Score = 39 (18.8 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D I+VW+ +R I T D H E +L+A D + ++ +
Sbjct: 268 EDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN-LLAAGHDNGMIVFKLERERPAFA 326
Query: 159 LTG 161
L+G
Sbjct: 327 LSG 329
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 501 (181.4 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 97/174 (55%), Positives = 121/174 (69%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVSGGKMIVMAYQ---GCIL---ESRNEPCL---FR 92
+L KF+ +GI FH ++P I VS + + G ++ E + P F
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L GDDYKIKVWNY+ R+C+FTL GHLDY+RT FFH E PWILSASDDQTIRIW
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
WQ+R+ IC +TGHNHYVMCAQFHPT+D++ SASLDQ++R+WDISGLRKK+ AP
Sbjct: 121 NWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAP 174
Score = 383 (139.9 bits), Expect = 5.8e-80, Sum P(3) = 5.8e-80
Identities = 80/162 (49%), Positives = 103/162 (63%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS+R KG++FHPKRPWIL SLH+ IQLWDYRM TL+++F+EH+GPVRGI FH
Sbjct: 1 MLTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQG--CILESRNEPCLFR-------IKSVLG--DDYKIKVW 106
QP+FVSGG K+ V YQ C+ R + +L DD I++W
Sbjct: 61 PTQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R I T+ GH Y+ FH I SAS DQ++RIW
Sbjct: 121 NWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIW 162
Score = 356 (130.4 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 63/133 (47%), Positives = 92/133 (69%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KH + I + +E + ++HE R+KS AWD++GV +Y+T NH+KY+++NGD+GIIRTLD
Sbjct: 514 KHNVTIVTKTLEQVSSLHETIRIKSAAWDDAGVLLYSTLNHVKYSLLNGDNGIIRTLDQT 573
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGER 349
+Y+ K+KG VY LDR P L IDPTE++FKLAL+ Y+E+L I++ S LVG+
Sbjct: 574 VYLVKVKGRSVYCLDRNAKPRTLEIDPTEYRFKLALVKRNYDEMLQIIKTSSLVGQ--SI 631
Query: 350 IKILKSCGQTSLA 362
I L+ G +A
Sbjct: 632 ISYLQKKGYPEIA 644
Score = 292 (107.8 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 51/86 (59%), Positives = 68/86 (79%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
NH+KY+++NGD+GIIRTLD +Y+ K+KG VY LDR P L IDPTE++FKLAL+
Sbjct: 553 NHVKYSLLNGDNGIIRTLDQTVYLVKVKGRSVYCLDRNAKPRTLEIDPTEYRFKLALVKR 612
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
Y+E+L I++ S LVGQSII+YLQ+K
Sbjct: 613 NYDEMLQIIKTSSLVGQSIISYLQKK 638
Score = 191 (72.3 bits), Expect = 8.8e-99, Sum P(3) = 8.8e-99
Identities = 50/160 (31%), Positives = 87/160 (54%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKEN 485
GSF+TA +LL+ Q+G +F P + FL + S+T S P L P++ + R
Sbjct: 914 GSFDTAMQLLNRQVGAVHFAPLKPRFLEIFKASKTYLSATPGLPPLVNYVRRTVDETDSR 973
Query: 486 SH-PATNIKLEQLIA-KIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
PA LE + + +Q+ Y + K D ++ +N+L S+ + VV+++ E+E+AK+
Sbjct: 974 KVLPAIPRDLETIASVDLQEGYAAMRANKLEDGVKIFKNILYSVLVNVVSSEAEVEQAKK 1033
Query: 544 IINICKEYIVG-TNHIKYAIVNGD--HGIIRTLDLPIYIT 580
II +EYI+ T ++ ++ D G+ R+L+L Y T
Sbjct: 1034 IIATSREYILAMTIELERRALSTDTPEGLKRSLELSAYFT 1073
Score = 187 (70.9 bits), Expect = 5.5e-59, Sum P(3) = 5.5e-59
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + FHP+ PWILS+ + I++W+++ +L+ H V FH + + S
Sbjct: 96 VRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASL 155
Query: 71 --KMIVMAYQGCILESRNEPCL--FRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
+ + G + + + P F + ++ + ++ F L GH +
Sbjct: 156 DQSVRIWDISG-LRKKHSAPTTMSFEDQMARANNAQADMFGNTDAVVKFVLEGHDRGVNW 214
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSASLD 184
FH P I+SA DD+ I++W V T GH FHP D+++S D
Sbjct: 215 VAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVGED 274
Query: 185 QTIRVWDIS 193
+TIR WD++
Sbjct: 275 KTIRAWDLN 283
Score = 105 (42.0 bits), Expect = 2.0e-72, Sum P(3) = 2.0e-72
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPE 397
+N+ G+V +RI++ K LAYLTA HG + ++ +LPT+
Sbjct: 740 QNAIYRGDVEDRIQMFKEVDLYPLAYLTAKAHGLTEEAESILEVVGLSEDQVSLPTIEAP 799
Query: 398 AQLLRPPAPVAEAETNWPLLTVSKSFFE 425
Q+ +P VA + +WP+ + S FE
Sbjct: 800 PQIPQPI--VATYKASWPVKAAAHSSFE 825
Score = 64 (27.6 bits), Expect = 3.9e-46, Sum P(3) = 3.9e-46
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
FHP + ILS + I+ WD T ++ F I H + +F +G VM
Sbjct: 261 FHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEINLFAAGHDTGVMV 320
Query: 77 YQ 78
++
Sbjct: 321 FK 322
Score = 52 (23.4 bits), Expect = 6.9e-45, Sum P(3) = 6.9e-45
Identities = 28/116 (24%), Positives = 49/116 (42%)
Query: 50 HEGPVRGICFHNQQPIFVSGG--KMIVM-------AYQ--GCILESRN-EPCLFR----- 92
H+ V + FH P+ VS G ++I + A++ C +N CLF
Sbjct: 208 HDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDL 267
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
I SV G+D I+ W+ +R + + +D H E + +A D + ++
Sbjct: 268 ILSV-GEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEIN-LFAAGHDTGVMVF 321
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 505 (182.8 bits), Expect = 1.7e-90, Sum P(3) = 1.7e-90
Identities = 97/174 (55%), Positives = 120/174 (68%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILE---SRNEPC---LFR 92
+L KF+ +G+ FH QP I S G++ + Y+ G +L+ + P F
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L GDDYK+ VWNYK RK +F+L GH+DY+R FHHEYPWILS SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
WQSRNCI +LTGH+HYVMCA FHP++D++VSASLDQT+RVWDISGLR KN AP
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAP 176
Score = 394 (143.8 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 81/162 (50%), Positives = 104/162 (64%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE++S+R KG++FHP +PWIL+SLHNG IQLWDYRM TLL++FD H+GPVRGI FH
Sbjct: 3 MLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH 62
Query: 61 NQQPIFVSGG---KMIVMAYQG-------CILESRNEPCLFRIKS--VLG--DDYKIKVW 106
QP+FVSGG K+ V Y+ C C F + +L DD I++W
Sbjct: 63 PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R CI L GH Y+ FH I+SAS DQT+R+W
Sbjct: 123 NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVW 164
Score = 317 (116.6 bits), Expect = 1.7e-90, Sum P(3) = 1.7e-90
Identities = 67/183 (36%), Positives = 101/183 (55%)
Query: 206 KLVLSMKS---KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGV 262
K+V S + K+ +W KH ++I + +E + +IHE R+KS W E+ V
Sbjct: 488 KIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIKSAVWVENNV 547
Query: 263 FIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFK 322
+Y T +H+KYA+++GD G+I+TL+ +Y+ K KGN V+ L+R P IDPTE+ FK
Sbjct: 548 LLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTEYLFK 607
Query: 323 LALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNL 382
LAL+ YE+VLH+++NS LVG+ I L+ G +A NL
Sbjct: 608 LALLRKDYEQVLHLIQNSNLVGQA--IIAYLQKKGYPEIALQFVEDPSTRFELALECGNL 665
Query: 383 RTA 385
TA
Sbjct: 666 ETA 668
Score = 263 (97.6 bits), Expect = 6.8e-72, Sum P(2) = 6.8e-72
Identities = 47/86 (54%), Positives = 67/86 (77%)
Query: 556 NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINH 615
+H+KYA+++GD G+I+TL+ +Y+ K KGN V+ L+R P IDPTE+ FKLAL+
Sbjct: 554 DHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTEYLFKLALLRK 613
Query: 616 KYEEVLHIVRNSRLVGQSIIAYLQQK 641
YE+VLH+++NS LVGQ+IIAYLQ+K
Sbjct: 614 DYEQVLHLIQNSNLVGQAIIAYLQKK 639
Score = 206 (77.6 bits), Expect = 8.3e-52, Sum P(3) = 8.3e-52
Identities = 56/190 (29%), Positives = 89/190 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ +FH + PWILS + I++W+++ + H V FH + + VS
Sbjct: 98 VRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASL 157
Query: 71 KMIVMAYQGCILESRNE-PCLFRIKSVLGDDYKIKVWN--YKQRKCI--FTLLGHLDYIR 125
V + L +N P ++ L + + N + I F L GH +
Sbjct: 158 DQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHN-SISNDLFGSTDAIVKFVLEGHDRGVN 216
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSASL 183
FH P ILSA DD+ +++W + V T GH + V C FHP ++++SAS
Sbjct: 217 WCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASE 276
Query: 184 DQTIRVWDIS 193
D+TIRVWD++
Sbjct: 277 DKTIRVWDLN 286
Score = 148 (57.2 bits), Expect = 9.4e-73, Sum P(3) = 9.4e-73
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 322 KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXN 381
K+A+I K + L + +NS + EV RI IL+ G +AYLTA ++G +
Sbjct: 725 KMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKAQQILSH 784
Query: 382 LRTADPNATLPTVHPEAQLLRPPAPVAEAET-NWPLLTVSKSFFEGSFETAFKLL 435
+ LP++ P PV E T NWPLL S S FE S + + L
Sbjct: 785 CNKTEEEIKLPSL---GSAFTTPVPVNETYTHNWPLLDTSHSTFEKSLQERMEQL 836
Score = 147 (56.8 bits), Expect = 1.7e-90, Sum P(3) = 1.7e-90
Identities = 42/156 (26%), Positives = 74/156 (47%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKEN 485
G FE+A K+L+ Q+G NF P + FL Y SR T+ L P++++ R+ E
Sbjct: 923 GDFESAMKILNKQVGAINFSPLKTRFLEIYTASRVYLPTISGLDPLVSY-VRRNAETAER 981
Query: 486 SH--PATNIKLEQLIA-KIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAK 542
S P L + + ++ + Y+L + K ++A R+++ V +++E +E
Sbjct: 982 SQALPFITRNLASIKSHELHEAYRLVKANKILEAQICFRSIIYLALTTVANSEEEADEIS 1041
Query: 543 QIINICKEYIVGTNHIKYAIVNGDHGIIRTLDLPIY 578
+I+ C YIV + G+ R L+L Y
Sbjct: 1042 ALIDECCRYIVALSCELERRRLGEEDTKRALELSYY 1077
Score = 125 (49.1 bits), Expect = 2.3e-43, Sum P(3) = 2.3e-43
Identities = 51/211 (24%), Positives = 85/211 (40%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDY---RMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
+FHP I+S+ + +++WD RM E + HN + G
Sbjct: 144 AFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQA--HNSISNDLFGSTD 201
Query: 73 IVMAYQGCILESRNEP---CLFR--IKSVL--GDDYKIKVWNYKQRKC--IFTLLGHLDY 123
++ + +LE + C F + +L GDD +K+W K + T GH +
Sbjct: 202 AIVKF---VLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNN 258
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+ FH ILSAS+D+TIR+W R + N HP ++ +A
Sbjct: 259 VSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAH- 317
Query: 184 DQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214
D + V+ + R + A + L+ K K
Sbjct: 318 DSGVMVFKLERERPAH-ALNINTLLYVNKEK 347
Score = 37 (18.1 bits), Expect = 6.1e-79, Sum P(3) = 6.1e-79
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 609 KLALINHKYEEVLHIVRNSRLVGQ--SIIAYLQQ 640
K+A+I K + L + +NS + + S I L+Q
Sbjct: 725 KMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQ 758
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 456 (165.6 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 95/170 (55%), Positives = 114/170 (67%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCILESRNE---PCL---FR 92
+L KF+ V+G+ FH +P I S G + + Y+ +LE +E P F
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ L GDDYKIKVWNYKQR+C+FTL GH DYIR+ FH E PWI+S+SDD IRIW
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198
WQSR CI L GHNHYVM A FHP DD+VVSASLDQTIR+WDISGL+KK
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKK 170
Score = 394 (143.8 bits), Expect = 3.7e-78, Sum P(3) = 3.7e-78
Identities = 84/162 (51%), Positives = 104/162 (64%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
ML KFETK++RVKGLSFHP RPWIL+SLH+G I L+DYR+ TLLEKFDEHEGPVRGI FH
Sbjct: 1 MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH 60
Query: 61 NQQPIFVSGG---KMIVMAYQG--CILESRNEPCLFRIKSV---------LGDDYKIKVW 106
QP+FVSGG K+ V Y+ C+ + R DD I++W
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW 120
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R CI L GH Y+ + FH + ++SAS DQTIRIW
Sbjct: 121 NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIW 162
Score = 320 (117.7 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 56/111 (50%), Positives = 81/111 (72%)
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITK 294
+ N+K+E +C IHE KSG WD++GVFIY+TSNH+KY + NGD+G IRTL+ IYIT
Sbjct: 506 LANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSNHLKYLLQNGDNGTIRTLESTIYITG 565
Query: 295 IKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGE 345
+K N+V+ +DRE ++ ID TE+ KL+L+ Y +V+ I+R +RLVG+
Sbjct: 566 VKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNYNQVMTILRENRLVGK 616
Score = 242 (90.2 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 46/92 (50%), Positives = 67/92 (72%)
Query: 551 YIVGT-NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFK 609
+I T NH+KY + NGD+G IRTL+ IYIT +K N+V+ +DRE ++ ID TE+ K
Sbjct: 534 FIYSTSNHLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLK 593
Query: 610 LALINHKYEEVLHIVRNSRLVGQSIIAYLQQK 641
L+L+ Y +V+ I+R +RLVG++IIAYLQ+K
Sbjct: 594 LSLLQQNYNQVMTILRENRLVGKAIIAYLQKK 625
Score = 223 (83.6 bits), Expect = 3.9e-59, Sum P(3) = 3.9e-59
Identities = 58/200 (29%), Positives = 99/200 (49%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ + FH + PWI+SS + VI++W+++ T + + + H V FH + + VS
Sbjct: 96 IRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASL 155
Query: 71 KMIVMAYQGCILESR---------NEPCLFRIKSVL-GDDYKIKVWNYKQRKCIFTLLGH 120
+ + L+ + N+P R++ L G D +++ +L GH
Sbjct: 156 DQTIRIWDISGLKKKMTTVKPYRENDP--MRLQDELFGTDISVRL----------SLEGH 203
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
+ FH P+I+SASDD +++W + GH + V CA FHP D+++S
Sbjct: 204 DRGVNWASFHPTQPYIVSASDDHQVKLWRMNDP-IVDTFRGHYNNVSCALFHPRQDLIIS 262
Query: 181 ASLDQTIRVWDISGLRKKNV 200
S D+TIRVWDI ++K V
Sbjct: 263 NSEDKTIRVWDI--IKKSTV 280
Score = 197 (74.4 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 45/130 (34%), Positives = 73/130 (56%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKEN 485
GSFE+A +L+ QIG NF P + MF+N ++ +R++ P + P ++ ++
Sbjct: 934 GSFESAMNILNSQIGAVNFDPIKSMFMNIFMATRSSLGC-NASTPSLLMPIQR-----KS 987
Query: 486 SHPATNIKLEQLIAKIQ-QCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQI 544
+ P L LI +++ Y+ TT GKF DA+ +L +I V K+E+ E K +
Sbjct: 988 AAPYITYGLGHLIERLKTNAYKSTTEGKFNDALSHFTYILHTIIFCSVDNKQEVNELKDL 1047
Query: 545 INICKEYIVG 554
INIC+EYI+G
Sbjct: 1048 INICREYILG 1057
Score = 168 (64.2 bits), Expect = 1.1e-73, Sum P(4) = 1.1e-73
Identities = 40/110 (36%), Positives = 61/110 (55%)
Query: 325 LINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRT 384
+I+++ +++ S +G+V ERIKIL+ G LAY+TA+ HG NL T
Sbjct: 711 MISYESSDIMSRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKAESIG-NLIT 769
Query: 385 ADPNATLPTVHPEAQLLRPPAPVA--EAETNWPLLTVSKSFFEGSFETAF 432
+D + LP + ++ LL PP+P+ E NWPLLT +KS + E F
Sbjct: 770 SDGKSQLPQLPKQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGENRF 819
Score = 116 (45.9 bits), Expect = 5.9e-48, Sum P(3) = 5.9e-48
Identities = 47/205 (22%), Positives = 93/205 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDY----RMNTLLEKFDEHEGPVRGICFHNQQPIFVS--GG 70
FHPK ++S+ + I++WD + T ++ + E++ P+R Q +F +
Sbjct: 143 FHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREND-PMR-----LQDELFGTDISV 196
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
++ + + + + P I S DD+++K+W + T GH + + FH
Sbjct: 197 RLSLEGHDRGVNWASFHPTQPYIVSA-SDDHQVKLWRMND-PIVDTFRGHYNNVSCALFH 254
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
I+S S+D+TIR+W ++ + ++ H+ + A HP ++ +A D + V
Sbjct: 255 PRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLAS-HPNQNLF-AAGHDSGMIV 312
Query: 190 WDISGLRKKNVAPG-MGKLVLSMKS 213
+ + R V G G L K+
Sbjct: 313 FKLERERPLFVQNGDSGVFFLKKKN 337
Score = 92 (37.4 bits), Expect = 1.0e-67, Sum P(4) = 1.0e-67
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW---D--ISGLRK--KNVA-----PGMGK 206
L GH+ V A FHPT +VSAS D +++W D + R NV+ P
Sbjct: 200 LEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDPIVDTFRGHYNNVSCALFHPRQDL 259
Query: 207 LVLSMKSKH-PIWKYCKPVKYCNPKHTLHICNRKMEPLCNI--HENTRVKSGAWDESGVF 263
++ + + K +W K K T+H+ R + + H N + + D SG+
Sbjct: 260 IISNSEDKTIRVWDIIK-------KSTVHMIRRDHDRFWTLASHPNQNLFAAGHD-SGMI 311
Query: 264 IYTTSNHIKYAIVNGDHGI 282
++ + NGD G+
Sbjct: 312 VFKLERERPLFVQNGDSGV 330
Score = 51 (23.0 bits), Expect = 1.1e-73, Sum P(4) = 1.1e-73
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 259 ESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTE 318
ES ++I N+ +AI I +D Y+ K+ Q Y ++ + +LR +
Sbjct: 558 ESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNY-NQVMT--ILRENRLV 614
Query: 319 FKFKLALINHK-YEEVLHIVRNSR 341
K +A + K Y +V+H V++ R
Sbjct: 615 GKAIIAYLQKKGYPDVVHFVKDDR 638
Score = 47 (21.6 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 551 YIVGTNHIK-YAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFK 609
YI G + K +AI I +D Y+ K+ Q Y ++ + +LR + K
Sbjct: 562 YITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQNY-NQVMT--ILRENRLVGKAI 618
Query: 610 LALINHK-YEEVLHIVRNSR 628
+A + K Y +V+H V++ R
Sbjct: 619 IAYLQKKGYPDVVHFVKDDR 638
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 467 (169.5 bits), Expect = 6.5e-87, Sum P(3) = 6.5e-87
Identities = 94/186 (50%), Positives = 120/186 (64%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQ-GCIL---ESRNEPCL---FR 92
+L KF+ +GI FH +P + V+ + + Y+ G +L E P F
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 93 IKSVL----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+ GDDY IKVW+ KC++TL GHLDY+RT FFH E PWI+SASDDQTIRIW
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIW 122
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
WQ+R I LTGHNH+VMCAQFHPTDD++VSASLD+TIR+WDISGLRK++ APG
Sbjct: 123 NWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFE 182
Query: 209 LSMKSK 214
M ++
Sbjct: 183 EQMSAQ 188
Score = 347 (127.2 bits), Expect = 6.5e-87, Sum P(3) = 6.5e-87
Identities = 70/161 (43%), Positives = 106/161 (65%)
Query: 205 GKLV--LSMKS-KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
GK V L++K+ K+ W KHT+ + +K+E + ++HE R+KS AWDE+G
Sbjct: 484 GKKVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWDETG 543
Query: 262 VFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKF 321
V IY+T NHI+Y+++NGD GII+TL+ +YITK++G VY L+RE +L IDPTE++F
Sbjct: 544 VLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYRF 603
Query: 322 KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLA 362
K AL+N + EVL ++++S LVG+ I L+ G +A
Sbjct: 604 KKALVNKNFPEVLRLIKDSNLVGQ--NIISYLQKSGYPEIA 642
Score = 342 (125.4 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 74/164 (45%), Positives = 98/164 (59%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS R KG++FHP RPW+L +L + IQLWDYRM TLL +F++HEGPVRG+ FH
Sbjct: 3 MLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFH 62
Query: 61 NQQPIFVSGG-----KMIVMAYQGCILESRNEPCLFRIKSVL-----------GDDYKIK 104
QPIFVS G K+ + C+ L +++V DD I+
Sbjct: 63 PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGH--LDYVRTVFFHRELPWIISASDDQTIR 120
Query: 105 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
+WN++ RK I L GH ++ FH I+SAS D+TIRIW
Sbjct: 121 IWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIW 164
Score = 267 (99.0 bits), Expect = 3.1e-68, Sum P(2) = 3.1e-68
Identities = 59/150 (39%), Positives = 92/150 (61%)
Query: 493 KLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQII-NICKEY 551
K+ QL K + + G++V + K L + L ++ + E K +
Sbjct: 486 KVSQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWDETGVL 545
Query: 552 IVGT-NHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKL 610
I T NHI+Y+++NGD GII+TL+ +YITK++G VY L+RE +L IDPTE++FK
Sbjct: 546 IYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNREGEIEILTIDPTEYRFKK 605
Query: 611 ALINHKYEEVLHIVRNSRLVGQSIIAYLQQ 640
AL+N + EVL ++++S LVGQ+II+YLQ+
Sbjct: 606 ALVNKNFPEVLRLIKDSNLVGQNIISYLQK 635
Score = 168 (64.2 bits), Expect = 9.8e-49, Sum P(3) = 9.8e-49
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + FH + PWI+S+ + I++W+++ + H V FH + VS
Sbjct: 98 VRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASL 157
Query: 71 KMIVMAYQGCILESRNE-PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + L R+ P + + + + F L GH + F
Sbjct: 158 DETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSLGDCVVKFILEGHTRGVNWASF 217
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSASLDQTI 187
H P I+S SDD+ +++W + V T GH + V FHP ++++S D+T+
Sbjct: 218 HPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTL 277
Query: 188 RVWDI 192
RVWD+
Sbjct: 278 RVWDL 282
Score = 122 (48.0 bits), Expect = 6.5e-87, Sum P(3) = 6.5e-87
Identities = 43/165 (26%), Positives = 76/165 (46%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPV-MAFPTRKGPGIKE 484
G+F+ A + L Q+GV P ++ F N Y RT + P P + + + E
Sbjct: 918 GAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTVSE 977
Query: 485 NSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQI 544
+ L+ + K+ + Y+ K AIE R + I LL+V ++ + A +I
Sbjct: 978 DQILPYVPGLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKI 1037
Query: 545 INICKEYIVGTNHIKYAIVNGDHG-IIRTLDLPIYITKIKGNQVY 588
+ +EYI+G + I+ + G +R L+L Y TK K + ++
Sbjct: 1038 LETAREYILGLS-IELERRSLKEGNTVRMLELAAYFTKAKLSPIH 1081
Score = 104 (41.7 bits), Expect = 4.6e-42, Sum P(3) = 4.6e-42
Identities = 46/187 (24%), Positives = 75/187 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ---QPIFVSGG--- 70
FHP I+S+ + I++WD + L K H P F Q Q + G
Sbjct: 145 FHPTDDLIVSASLDETIRIWDI---SGLRK--RHSAPGTS-SFEEQMSAQQNLLDGSLGD 198
Query: 71 ---KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKC--IFTLLGHLDYIR 125
K I+ + + + P L I S DD ++K+W K + T GH + +
Sbjct: 199 CVVKFILEGHTRGVNWASFHPTLPLIVSG-SDDRQVKLWRMSATKAWEVDTCRGHTNNVD 257
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
+ FH I+S +D+T+R+W R + N HP ++ A+ D
Sbjct: 258 SVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLF-GAAHDS 316
Query: 186 TIRVWDI 192
I V+ +
Sbjct: 317 GIMVFKL 323
Score = 83 (34.3 bits), Expect = 3.2e-71, Sum P(4) = 3.2e-71
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 154 NCIC--VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
+C+ +L GH V A FHPT ++VS S D+ +++W +S +
Sbjct: 198 DCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATK 242
Score = 74 (31.1 bits), Expect = 2.7e-58, Sum P(3) = 2.7e-58
Identities = 23/104 (22%), Positives = 38/104 (36%)
Query: 322 KLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXN 381
K+ I E+ ++ N+ ER I G LAY A +G
Sbjct: 722 KMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEAAASAFLEQ 781
Query: 382 LRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLTVSKSFFE 425
+ + TLP + ++ P +++ WPL S+FE
Sbjct: 782 AEVDEQDVTLPDQMDASNFVQRPV-ISKPLEKWPLKEAELSYFE 824
Score = 64 (27.6 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 23/103 (22%), Positives = 48/103 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V + FHP + I+S + +++WD T +++F I H +F +
Sbjct: 256 VDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHD 315
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVL---GDDYKIKVWNYKQR 111
+M ++ L+ R PC F ++ L + +I+ +N+++R
Sbjct: 316 SGIMVFK---LD-RERPCSFIHQNQLFFVNAEKQIQSFNFQKR 354
Score = 37 (18.1 bits), Expect = 4.9e-44, Sum P(2) = 4.9e-44
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 283 IRTLDLPIYITKIKGNQVY 301
+R L+L Y TK K + ++
Sbjct: 1063 VRMLELAAYFTKAKLSPIH 1081
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 454 (164.9 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 92/174 (52%), Positives = 116/174 (66%)
Query: 43 LLEKFDEHEGPVRGICFHNQQP---IFVSGGKMIVMAYQGCILESRNEPCLFRIKSV--- 96
+L KF+ +G+ FH ++P + + + + Y+ L R E + ++SV
Sbjct: 3 MLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFH 62
Query: 97 ----L----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L GDDY IKVW+ RKCIFTL GHLDYIR FHH+ PWI+S SDDQTIRIW
Sbjct: 63 PTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIW 122
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
WQ+R I LTGHNHYVM AQFHP++D++VSASLDQT+RVWDISGLRKK+ AP
Sbjct: 123 NWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAP 176
Score = 357 (130.7 bits), Expect = 7.2e-68, Sum P(3) = 7.2e-68
Identities = 74/162 (45%), Positives = 99/162 (61%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
MLTKFE+KS+R KG++FHPKRPW L SLH+ IQLWDYRM TL+++F++H GPVR + FH
Sbjct: 3 MLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFH 62
Query: 61 NQQPIFVSGG-----KMIVMAYQGCILESRNEPCLFRIKSV---------LGDDYKIKVW 106
QP+FVSGG K+ + + CI R S DD I++W
Sbjct: 63 PTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIW 122
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
N++ R+ I L GH Y+ + FH I+SAS DQT+R+W
Sbjct: 123 NWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVW 164
Score = 334 (122.6 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 56/116 (48%), Positives = 89/116 (76%)
Query: 230 KHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
KHT+ I ++ ++ + ++HE R+KS AWD++GV +Y+T NHIKY ++NGD+GII+TL+
Sbjct: 519 KHTITIADKDLKLITSMHETIRIKSAAWDDTGVLLYSTLNHIKYTLLNGDNGIIKTLENT 578
Query: 290 IYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGE 345
+YITK++GN +Y L+R+ + IDPTE++FK AL+N + EVL +++NS LVG+
Sbjct: 579 LYITKVQGNLIYCLNRQGQVETITIDPTEYRFKRALVNKNFGEVLRLIKNSTLVGQ 634
Score = 266 (98.7 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 54/136 (39%), Positives = 88/136 (64%)
Query: 508 TTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQII-NICKEYIVGT-NHIKYAIVNG 565
+++G+++ + K + L ++T+ E K + + T NHIKY ++NG
Sbjct: 508 SSNGQYLALLSKHTITIADKDLKLITSMHETIRIKSAAWDDTGVLLYSTLNHIKYTLLNG 567
Query: 566 DHGIIRTLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVR 625
D+GII+TL+ +YITK++GN +Y L+R+ + IDPTE++FK AL+N + EVL +++
Sbjct: 568 DNGIIKTLENTLYITKVQGNLIYCLNRQGQVETITIDPTEYRFKRALVNKNFGEVLRLIK 627
Query: 626 NSRLVGQSIIAYLQQK 641
NS LVGQ+II YLQ+K
Sbjct: 628 NSTLVGQNIIGYLQKK 643
Score = 187 (70.9 bits), Expect = 8.7e-50, Sum P(3) = 8.7e-50
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++G+SFH PWI+S + I++W+++ + H V FH + + VS
Sbjct: 98 IRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASL 157
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIK------VWNYKQRKCIFTLLGHLDYI 124
V + L ++ +++ D + + ++ + L GH +
Sbjct: 158 DQTVRVWDISGLRKKHSAPTSSVRA-FEDQLQRQQLPQQDIFGNINAVVKYVLEGHDKGV 216
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT--GHNHYVMCAQFHPTDDIVVSAS 182
FH P I+SA DD+ +++W V T GH V+ A FHP D+++S S
Sbjct: 217 NYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVS 276
Query: 183 LDQTIRVWDIS 193
D+TIRVWD++
Sbjct: 277 DDKTIRVWDLN 287
Score = 177 (67.4 bits), Expect = 9.6e-49, Sum P(3) = 9.6e-49
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I++W+Y+ I H+ +R+ FH P +S DD TI++W +R CI L GH
Sbjct: 35 IQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGH 94
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216
Y+ FH ++S S DQTIR+W+ ++ G V+S + HP
Sbjct: 95 LDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQF-HP 147
Score = 128 (50.1 bits), Expect = 3.1e-81, Sum P(3) = 3.1e-81
Identities = 60/213 (28%), Positives = 102/213 (47%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTRKGPGIKEN 485
G FE A LL+ QIGV NF P R F Y S+ Y LP + + A T I+ +
Sbjct: 938 GGFEQAASLLNKQIGVVNFEPLRTRFNQVYGASKL-Y--LPGMDELPAMKTY----IRHD 990
Query: 486 SHPATNIKLEQLIAKIQQCYQLTTSG--KFV-----DAIEKLRNVLISIPLLVVTTKKEI 538
+ K + ++ + +L + G KF +AI R V+ +I +L V + +
Sbjct: 991 NDEDNPRKFKPVVPGYDKLEELLSLGFKKFKANNLEEAITTFRKVIYTITVLNVDDEDDE 1050
Query: 539 EEAKQIINICKEYIVGTN-HI-KYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSP 596
+ +I+ +C+EYI+G + + + + + D + R L+L Y T+ + + L+
Sbjct: 1051 TKCHEILRLCREYILGLSIELERRKLPSSD--VKRNLELAAYFTRAQLQPSHKLN----- 1103
Query: 597 HVLRIDPTE-FKFK-LALINHKYEEVLHIVRNS 627
L++ T+ FK K A ++ EE+L I NS
Sbjct: 1104 -ALQVAMTQSFKNKNYASASYFAEELLKISNNS 1135
Score = 94 (38.1 bits), Expect = 6.0e-57, Sum P(4) = 6.0e-57
Identities = 28/132 (21%), Positives = 56/132 (42%)
Query: 299 QVYYLDRECSPHVLRIDPTEFKFKLALINHKYEEVLHIVRNSRLVGEVGERIKILKSCGQ 358
Q+++ D+ ++ + D K++ I ++ +V+N+ ++ +R ++ G
Sbjct: 707 QLHHFDKLSFLYLYKGDDERLD-KMSTIAQHRDDTSSLVQNTLYNNDIKKRCQVYIQNGM 765
Query: 359 TSLAYLTAATHGXXXXXXXXXXNLRTADPNATLPTVHPEAQLLRPPAPVAEAETNWPLLT 418
LAY A ++G ++ + LP + L P P+ E NWPL
Sbjct: 766 LPLAYTLAKSNGLNELAEQILQEANISEKDVELPELGDVVPL---PKPIGEPVGNWPLKD 822
Query: 419 VSKSFFEGSFET 430
S+FE + T
Sbjct: 823 SELSYFETALIT 834
Score = 55 (24.4 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHE 51
FHP + ILS + I++WD +++F EH+
Sbjct: 265 FHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHD 300
Score = 40 (19.1 bits), Expect = 1.8e-34, Sum P(3) = 1.8e-34
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR 111
+ G +L + P I SV DD I+VW+ +R
Sbjct: 256 HTGNVLSAIFHPHQDLILSV-SDDKTIRVWDLNKR 289
Score = 39 (18.8 bits), Expect = 6.0e-57, Sum P(4) = 6.0e-57
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYI 292
++ + L I N VK +W +G ++ S H I + D +I ++ I I
Sbjct: 489 QQRKELAEISVNN-VKYVSWSSNGQYLALLSKHT-ITIADKDLKLITSMHETIRI 541
>RGD|1310525 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] InterPro:IPR006692 InterPro:IPR010714
Pfam:PF04053 Pfam:PF06957 RGD:1310525 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 GO:GO:0005198 GO:GO:0030157 GO:GO:0030126
UniGene:Rn.203109 EMBL:BC091312 IPI:IPI00372458 STRING:Q5BJV4
PRIDE:Q5BJV4 HOVERGEN:HBG068904 InParanoid:Q5BJV4
ArrayExpress:Q5BJV4 Genevestigator:Q5BJV4 Uniprot:Q5BJV4
Length = 568
Score = 380 (138.8 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 73/131 (55%), Positives = 96/131 (73%)
Query: 426 GSFETAFKLLHDQIGVKNFLPYRQMFLNSYLQSRTAYSTLPLLAPVMAFPTR--KGPGIK 483
GSFETA +LLHDQ+GV F PY+Q+FL +Y + RT Y LP L + ++P R K G+K
Sbjct: 278 GSFETAMRLLHDQVGVVQFGPYKQLFLQTYARGRTTYQALPCLPSMYSYPNRNWKDAGLK 337
Query: 484 ENSHPATNIKLEQLIAKIQQCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQ 543
N PA +KL LI ++Q CYQL+T GKF DA+EK R++L+S+PLLVV K+EI EA+Q
Sbjct: 338 -NGVPAVGLKLNDLIQRLQLCYQLSTVGKFEDAVEKFRSILLSVPLLVVDNKQEIAEAQQ 396
Query: 544 IINICKEYIVG 554
+I IC+EYIVG
Sbjct: 397 LITICREYIVG 407
Score = 253 (94.1 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 338 RNSRLVGEVGERIKILKSCGQTSLAYLTAATHGXXXXXXXXXXNLRTADPNA-TLPTVHP 396
+N+ +G+V ER++ILK+CGQ SLAYLTAATHG T DP T+P + P
Sbjct: 78 QNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLK---ETFDPEKETIPDIDP 134
Query: 397 EAQLLRPPAPVAEAETNWPLLTVSKSFFEGSFETAFK 433
A+LL+PPAP+ +TNWPLLTVSK FFEGS + K
Sbjct: 135 NAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGK 171
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 208 (78.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 54/163 (33%), Positives = 84/163 (51%)
Query: 46 KFDEHEGPVRGICFHNQQP-IFVS--GGKMIVMAYQG-CILES--------RNEPCLFRI 93
KF + V+ + H +P I S G + + YQ +++S R+ + R
Sbjct: 225 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 284
Query: 94 KSVLG--DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
+ V+ DD I+V+NY I H DYIR H P++LS+SDD I++W W+
Sbjct: 285 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 152 SR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
C + GH+HYVM F+P D + SASLD+TI++W++
Sbjct: 345 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 387
Score = 196 (74.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 58/189 (30%), Positives = 91/189 (48%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
KF +S RVK + HP PWIL+SL++G + +W+Y+ T+++ FD E PVR F ++
Sbjct: 225 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 284
Query: 64 PIFVSGGK-MIVMAYQGC------ILESRNE--PCLF---RIKSVLG--DDYKIKVWNYK 109
V+G M + Y + E+ + C+ + VL DD IK+W+++
Sbjct: 285 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 110 QR-KCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
+ C GH Y+ + TF + SAS D+TI+IW S + L H V
Sbjct: 345 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVN 404
Query: 168 CAQFHPTDD 176
C + D
Sbjct: 405 CVDYFTGGD 413
Score = 187 (70.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D IK+WN FTL HL + F + P++++ SDD T ++W +Q+++C+
Sbjct: 379 DRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQ 438
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 199
L GH H V FHP I+++ S D T+R+W + R +N
Sbjct: 439 TLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLEN 480
Score = 134 (52.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD+ KVW+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 422 DDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 472
Score = 86 (35.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 249 NTRVKSGAWDESGVFIYTTSN-HIKYAIVNGDHGIIRTLDLPIYITKIKGNQ--VYYLDR 305
N RV++G W FIYT S+ + Y V G+ + LD P+Y+ NQ VY +D+
Sbjct: 736 NERVRTGLW-VGDCFIYTNSSWRLNYC-VGGEVTTMYHLDRPMYLLGYLANQSRVYLIDK 793
Query: 306 ECSP--HVLRIDPTEFK 320
E + + L + E+K
Sbjct: 794 EFNVIGYTLLLSLIEYK 810
Score = 51 (23.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 548 CKEYIVGTNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQ--VYYLDRECSP--HVLRIDP 603
C Y + + Y V G+ + LD P+Y+ NQ VY +D+E + + L +
Sbjct: 748 CFIYTNSSWRLNYC-VGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSL 806
Query: 604 TEFK 607
E+K
Sbjct: 807 IEYK 810
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 216 (81.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 52/155 (33%), Positives = 85/155 (54%)
Query: 54 VRGICFHNQQPIFVS---GGKMIVMAY--QGCI--LESRNEPCL---FRIKS---VLG-D 99
V+GI FH +P ++ G + + +Y Q I E + P F + V G D
Sbjct: 16 VKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIVCGSD 75
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICV 158
D++++++NY + I + H DYIR+ H P++L+ASDD TI++W W+ C+ V
Sbjct: 76 DFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQV 135
Query: 159 LTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
GH+HYVM +P D + SA LD+T+++W +
Sbjct: 136 YEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSL 170
Score = 164 (62.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+S RVKG+ FHP PWIL++L++G + +W Y ++++ F+ + PVR F ++ V
Sbjct: 12 RSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIV 71
Query: 68 SGG---KMIVMAYQGC--ILESRNEPCLFRIKSV---------LGDDYKIKVWNYKQR-K 112
G ++ + Y I P R +V DD IK+W++++ K
Sbjct: 72 CGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWK 131
Query: 113 CIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
C+ GH Y+ + + SA D+T++IW S + L H
Sbjct: 132 CVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAH 182
Score = 148 (57.2 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 32/113 (28%), Positives = 62/113 (54%)
Query: 100 DYKIKVWNYKQRKCIFTL-------LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
D +K+W+ FTL + H+DY + + P++L+ SDD+T+++W + +
Sbjct: 162 DRTVKIWSLGSPHANFTLEAHETKGVNHVDY----YPQADKPYLLTTSDDKTVKVWDYTT 217
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGM 204
+ I L GH V A +HP +++S S D TI++W + R +++++ G+
Sbjct: 218 KALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYRLEQSLSYGL 270
Score = 120 (47.3 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +KVW+Y + I TL GH + +H E P I+S S+D TI+IW+
Sbjct: 206 DDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWH 256
Score = 102 (41.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 2 LTKFETKSARVKGLSFHPK--RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
L ETK V + ++P+ +P++L++ + +++WDY L+ + H V C+
Sbjct: 179 LEAHETKG--VNHVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACY 236
Query: 60 HNQQPIFVSGGK 71
H + P+ +SG +
Sbjct: 237 HPELPVIISGSE 248
Score = 76 (31.8 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE ++ ++ HP +P++L++ + I+LWD+ ++ ++ H V G+ +
Sbjct: 90 IASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAIN 149
Score = 73 (30.8 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ FE V+ F ++ WI+ + +++++Y + + F+ H +R I H
Sbjct: 47 IIKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVH 106
Query: 61 NQQPIFV 67
QP FV
Sbjct: 107 PTQP-FV 112
Score = 71 (30.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 249 NTRVKSGAWDESGVFIYTTS-NHIKYAIVNGDHGI-IRTLDLPIYITKIKGNQVYYLDRE 306
N V++G W FIYT S N + Y + GD I D P+Y+ G YL R+
Sbjct: 521 NESVRTGQW-VGDCFIYTNSTNRLNYLV--GDQTYTISHFDQPMYVL---G----YLPRD 570
Query: 307 CSPHVLRIDPTEFKFKLALINHKYEEVL 334
+V D F L+L +Y+ V+
Sbjct: 571 GRVYVADKDVNAVSFALSLSMVEYQTVV 598
Score = 62 (26.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 531 VVTTKKEIEEAKQIINICKEYIVGTNHIKYAIVNGDHGI-IRTLDLPIYITKIKGNQVYY 589
VVT E Q + C Y TN + Y + GD I D P+Y+ G Y
Sbjct: 516 VVTDVNESVRTGQWVGDCFIYTNSTNRLNYLV--GDQTYTISHFDQPMYVL---G----Y 566
Query: 590 LDRECSPHVLRIDPTEFKFKLALINHKYEEVL 621
L R+ +V D F L+L +Y+ V+
Sbjct: 567 LPRDGRVYVADKDVNAVSFALSLSMVEYQTVV 598
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 204 (76.9 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 43/126 (34%), Positives = 70/126 (55%)
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
+ +V ++ C + R+ + R +L DD +I+V+NY + + + H DY+R
Sbjct: 47 QQMVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIA 106
Query: 129 FHHEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQT 186
H P +L++SDD I++W W+ C V GH HYVM F+P D+ SASLD+T
Sbjct: 107 VHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRT 166
Query: 187 IRVWDI 192
++VW +
Sbjct: 167 VKVWQL 172
Score = 172 (65.6 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D +KVW FTL GH + ++H + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
L GH + FHP IV++ S D T+R+W
Sbjct: 224 TLEGHAQNISAVCFHPELPIVLTGSEDGTVRIW 256
Score = 161 (61.7 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 50/189 (26%), Positives = 85/189 (44%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ ++S RVK + HP PW+L +L+NG + + +Y +++ F+ + PVR F ++
Sbjct: 10 RLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSARFVARK 69
Query: 64 PIFVSGGK-MIVMAYQGCILESRNE--------PCLFRIKS---VL--GDDYKIKVWNY- 108
++G M + + LE + C+ + VL DD IK+WN+
Sbjct: 70 NWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
Query: 109 KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
K C GH Y+ F+ + SAS D+T+++W S L GH V
Sbjct: 130 KMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVN 189
Query: 168 CAQFHPTDD 176
C ++ D
Sbjct: 190 CVDYYHGGD 198
Score = 135 (52.6 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH I FH E P +L+ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWH 257
Score = 126 (49.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNY-KQRKCIFTLLGHLDYIRTTFFH-HEYP 134
Y CI +P + DD IK+WN+ K C GH Y+ F+ +
Sbjct: 101 YLRCIAVHPTQPLVL----TSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNN 156
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 191
SAS D+T+++W S L GH V C ++ D ++S + D+ +++WD
Sbjct: 157 TFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
Score = 100 (40.3 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 13/51 (25%), Positives = 32/51 (62%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
+P+++S + ++++WDY+ T ++ + H + +CFH + PI ++G +
Sbjct: 199 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSE 249
Score = 98 (39.6 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 40/180 (22%), Positives = 66/180 (36%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
M+ FE V+ F ++ WIL+ + I++++Y + F+ H +R I H
Sbjct: 49 MVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVH 108
Query: 61 NQQP-IFVSGGKMIVMAYQ-----GC--ILESRNE---PCLFRIK--SVLGD---DYKIK 104
QP + S M++ + C + E +F K + D +K
Sbjct: 109 PTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVK 168
Query: 105 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
VW FTL GH + ++H S + W +N CV T H
Sbjct: 169 VWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Score = 78 (32.5 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRECS 308
VK+G W FIYT S N I Y V G+ + LD +Y+ K N++Y D+E +
Sbjct: 526 VKTGLW-VGDCFIYTNSVNRINY-YVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELN 583
Query: 309 PHVLRIDPTEFKFKLALINHKYE 331
+ + +++ A++ +E
Sbjct: 584 VISFCLQLSVLEYQTAVMRRDFE 606
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 548 CKEYIVGTNHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRECSPHVLRIDPTE 605
C Y N I Y V G+ + LD +Y+ K N++Y D+E + + +
Sbjct: 535 CFIYTNSVNRINY-YVGGEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSV 593
Query: 606 FKFKLALINHKYE 618
+++ A++ +E
Sbjct: 594 LEYQTAVMRRDFE 606
Score = 48 (22.0 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 188 RVWDISGLR-KKNVAPGM--GKLVLSMKSKHP 216
RVW IS +R NVA G G +++ + + P
Sbjct: 273 RVWTISSMRGTNNVALGYDEGSIIIKVGREEP 304
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 220 (82.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 252 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 311
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 312 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 188 (71.2 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 54 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 113
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 51 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 110
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 111 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 170
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 171 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 221
Score = 156 (60.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 106 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 165
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 166 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 199
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F +
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 96
Query: 175 DDIVVSASLDQTIRVWDISG 194
++ S S D TI++WD G
Sbjct: 97 GKLLASCSADMTIKLWDFQG 116
Score = 127 (49.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 303
Query: 194 GLR 196
R
Sbjct: 304 NKR 306
Score = 124 (48.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 293 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 44 (20.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 130 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 173
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 88 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 133
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 206 (77.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 189 VWDI 192
VW +
Sbjct: 140 VWQL 143
Score = 185 (70.2 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 135 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 194
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 195 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 254
Query: 215 HPI 217
+ +
Sbjct: 255 NNV 257
Score = 132 (51.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 178 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 125 (49.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 12 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 70
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 71 DYIRCIAVHPTQPFILTSSDDMLIKLWD 98
Score = 125 (49.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---KMIVMAYQGC 80
+L+SL+NG + +W++ TL++ F+ + PVR F ++ V+G ++ V Y
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 81 ----ILESRNE--PCL-------FRIKSVLGDDYKIKVWNY-KQRKCIFTLLGHLDYIRT 126
+ E+ ++ C+ F + S DD IK+W++ K+ C GH Y+
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 118
Query: 127 TFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
+ + SAS D+TI++W S + L GH V C ++ D
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGD 169
Score = 71 (30.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 495 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 550
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 220 (82.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 36/103 (34%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSA+ D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SA+ D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 45 (20.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 207 (77.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 37/100 (37%), Positives = 60/100 (60%)
Query: 96 VLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154
++G DD++I+V+NY + + H DYIR+ H P++LS SDD T+++W W++
Sbjct: 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130
Query: 155 CI-CVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
+ GH H+VMC F+P D S LD+T++VW +
Sbjct: 131 ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170
Score = 175 (66.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 41/129 (31%), Positives = 71/129 (55%)
Query: 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHH--EYPWI 136
C+ + +P F + D +KVW+ Q FTL G + ++ + P++
Sbjct: 145 CVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
++ASDD TI+IW +Q+++C+ L GH V A FHPT I++S S D T+++W+ S +
Sbjct: 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261
Query: 197 -KKNVAPGM 204
+K + G+
Sbjct: 262 VEKTLNVGL 270
Score = 158 (60.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +S RVKG+ FHP PW+L++L++G ++LW+Y + E PVR F ++
Sbjct: 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN 68
Query: 65 IFVSGG---KMIVMAYQ-G-CILESRNEPCLFRIKSVL---------GDDYKIKVWNYKQ 110
+ G ++ V Y G +++ P R +V DD +K+WN++
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 111 RKCIF-TLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148
+ T GH ++ F+ + P S D+T+++W
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Score = 112 (44.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
++++WNY+ + + ++ +R F WI+ SDD IR++ + + +
Sbjct: 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H Y+ HPT V+S S D T+++W+
Sbjct: 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125
Score = 72 (30.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIR-TLDLPIYITKIKGNQVYYLDRECSP 309
+ SG W VFI+TT+ N + Y + + + T ++ + + N+VY DRE
Sbjct: 536 ITSGKW-VGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHV 594
Query: 310 HVLRIDPTEFKFKLALINHKYEEVLHIV 337
+ I +F+ + + EE + V
Sbjct: 595 YGYEISLEVLEFQTLTLRGEIEEAIENV 622
Score = 50 (22.7 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 551 YIVGTNHIKYAIVNGDHGIIR-TLDLPIYITKIKGNQVYYLDRECSPHVLRIDPTEFKFK 609
+ TN + Y + + + T ++ + + N+VY DRE + I +F+
Sbjct: 548 FTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQ 607
Query: 610 LALINHKYEEVLHIV 624
+ + EE + V
Sbjct: 608 TLTLRGEIEEAIENV 622
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 220 (82.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D + F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 44/171 (25%), Positives = 71/171 (41%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F + ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 127 (49.8 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00016
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 211 (79.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 46/124 (37%), Positives = 69/124 (55%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W+ + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 180 (68.4 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 51/189 (26%), Positives = 93/189 (49%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCLFRIKS---VL--GDDYKIKVWNYK 109
++G ++ V Y + E+ ++ C+ + +L DD IK+W+++
Sbjct: 70 NWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWE 129
Query: 110 QR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
++ C GH Y+ + + SAS D+TI++W S + L GH+ V
Sbjct: 130 KKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVN 189
Query: 168 CAQFHPTDD 176
C ++ D
Sbjct: 190 CIDYYSGGD 198
Score = 178 (67.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
L GH V C FHP I+++ S D T+R+W S R
Sbjct: 224 TLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYR 262
Score = 131 (51.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWH 257
Score = 126 (49.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 23/88 (26%), Positives = 48/88 (54%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R + F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPYILTSSDDMLIKLWD 127
Score = 67 (28.6 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K +++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-FVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKE 579
Score = 64 (27.6 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 188 RVWDISGLRKKN-VAPGM--GKLVLSMKSKHPIWKYCKPVKYCNPKHT-LHICNRKMEPL 243
RVW +SGLR N VA G G +++ + + P K KH+ + N K
Sbjct: 273 RVWCVSGLRGSNSVALGYDEGSIIIKLGREEPAMSMDTNGKIIWAKHSEIQQANLKAMGD 332
Query: 244 CNIHENTRVKSGAWDESGVFIYT-TSNHI---KYAIVNGD 279
I + R+ D IY T H ++ +V GD
Sbjct: 333 AEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGD 372
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 219 (82.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 36/92 (39%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +ILS +DD+T+R+W ++++ C+ L
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T VV+ S+DQT++VW+
Sbjct: 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + + S M +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W + C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E F LG K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---FTSGGPLGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++SAS+D TI++W +++ + L GH V F T ++ S S D TI++WD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 128 (50.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 120 (47.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD ++VW++K ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 44 (20.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ + ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 206 (77.6 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 20 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 79
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 80 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 189 VWDI 192
VW +
Sbjct: 140 VWQL 143
Score = 185 (70.2 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 135 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 194
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 195 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 254
Query: 215 HPI 217
+ +
Sbjct: 255 NNV 257
Score = 132 (51.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 178 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Score = 125 (49.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 12 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 70
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 71 DYIRCIAVHPTQPFILTSSDDMLIKLWD 98
Score = 125 (49.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---KMIVMAYQGC 80
+L+SL+NG + +W++ TL++ F+ + PVR F ++ V+G ++ V Y
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 81 ----ILESRNE--PCL-------FRIKSVLGDDYKIKVWNY-KQRKCIFTLLGHLDYIRT 126
+ E+ ++ C+ F + S DD IK+W++ K+ C GH Y+
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 118
Query: 127 TFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
+ + SAS D+TI++W S + L GH V C ++ D
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGD 169
Score = 71 (30.1 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 495 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 550
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 185 (70.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 177 (67.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 38/123 (30%), Positives = 66/123 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 177 (67.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 54/191 (28%), Positives = 90/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ T GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 185 (70.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 185 (70.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 185 (70.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 206 (77.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 185 (70.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 39/123 (31%), Positives = 67/123 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V CA FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 206 (77.6 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 73 IVMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+V ++ C L R + R V+ DD +I+V+NY + + H DYIR H
Sbjct: 49 LVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVH 108
Query: 131 HEYPWILSASDDQTIRIWYWQSR-NCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIR 188
P+IL++SDD I++W W + +C V GH HYVM +P D+ SASLD+TI+
Sbjct: 109 PTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 189 VWDI 192
VW +
Sbjct: 169 VWQL 172
Score = 181 (68.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 38/123 (30%), Positives = 66/123 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D IKVW FTL GH + ++ + P+++S +DD+ ++IW +Q++ C+
Sbjct: 164 DRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP-GMGKL--VLSMKSK 214
L GH V C FHP I+++ S D T+R+W S R ++ GM ++ V S++
Sbjct: 224 TLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGS 283
Query: 215 HPI 217
+ +
Sbjct: 284 NNV 286
Score = 180 (68.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP PW+L+SL+NG + +W++ TL++ F+ + PVR F ++
Sbjct: 10 KLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 64 PIFVSGG---KMIVMAYQGC----ILESRNE--PCL-------FRIKSVLGDDYKIKVWN 107
V+G ++ V Y + E+ ++ C+ F + S DD IK+W+
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTS--SDDMLIKLWD 127
Query: 108 Y-KQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ K+ C GH Y+ + + SAS D+TI++W S + L GH
Sbjct: 128 WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKG 187
Query: 166 VMCAQFHPTDD 176
V C ++ D
Sbjct: 188 VNCIDYYSGGD 198
Score = 132 (51.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + FH E P I++ S+D T+RIW+
Sbjct: 207 DDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWH 257
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 105 VWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
VWN++ + + T + L +R F W+++ +DD IR++ + + + + H+
Sbjct: 41 VWNHETQTLVKTFEVCDLP-VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHS 99
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
Y+ C HPT ++++S D I++WD
Sbjct: 100 DYIRCIAVHPTQPFILTSSDDMLIKLWD 127
Score = 71 (30.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYITKI--KGNQVYYLDRE 306
VK+G W FIYT+S N + Y V G+ I LD +Y+ K N++Y D+E
Sbjct: 524 VKTGLW-VGDCFIYTSSVNRLNY-YVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKE 579
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 219 (82.2 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 63/205 (30%), Positives = 95/205 (46%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF-HNQQ 63
F + S RVK + FH ++PWIL++LH G +Q+W+Y TL++ + E R F H +
Sbjct: 103 FVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKN 162
Query: 64 PIFVSGGKMIVMAYQGCILESRNE--------------PCLFRIKSVLGDDYKIKVWNYK 109
I + + + NE P L + S DD KI+VW+++
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISA-SDDRKIRVWDWE 221
Query: 110 QR-KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
+ H YI + E P +S S D+T+++W + IC L GH V
Sbjct: 222 NEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVN 281
Query: 168 CAQFHPTDDIVVSASLDQTIRVWDI 192
C +F T +VS S D +I VWDI
Sbjct: 282 CVEFL-TGGRIVSGSDDCSICVWDI 305
Score = 173 (66.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSG---G---------KMIVMAYQGCILESRNEP 88
N F H V+ + FH+++P ++ G K +V A + +R
Sbjct: 97 NRAAPNFVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAK 156
Query: 89 CLFRIK--SVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIR 146
+ R + DD +I++++ + I H D+IR+ H P+++SASDD+ IR
Sbjct: 157 FIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIR 216
Query: 147 IWYWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
+W W++ H HY+M +P D ++ VS SLD+T++VW +
Sbjct: 217 VWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKL 264
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/195 (27%), Positives = 93/195 (47%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICF 59
++ +F S ++ L+ HP P+++S+ + I++WD+ +E+ F EH + I
Sbjct: 183 LINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAV 242
Query: 60 HNQQP-IFVSGG-----KMIVMAYQG--CILESRNEP--CLFRI---KSVLG-DDYKIKV 105
+ + P +FVSG K+ + Q C LE + C+ + + V G DD I V
Sbjct: 243 NPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRIVSGSDDCSICV 302
Query: 106 WNYKQRKCIFTLLG-HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W+ + +KCI TL H + + TF WI+S ++D T++IW Q+ + L
Sbjct: 303 WDIQTQKCIETLKNAHKNNV--TFVTPFKTWIISGAEDSTVKIWNSQTFSLEKELNFEKG 360
Query: 165 YVMCAQFHPTDDIVV 179
C +D I V
Sbjct: 361 RAWCVAAGKSDAIAV 375
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 46/208 (22%), Positives = 87/208 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ E + F ++ WI ++ + I+++D +L+ +F H +R + H
Sbjct: 141 LVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVH 200
Query: 61 NQQPIFVSGG---KMIVMAYQG-CILESRNEPCLFRIKSVL-----------GD-DYKIK 104
P +S K+ V ++ +E + I + G D +K
Sbjct: 201 PTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLK 260
Query: 105 VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL-TGHN 163
VW +++ I TL GH + F I+S SDD +I +W Q++ CI L H
Sbjct: 261 VWKLGEQESICTLEGHEKGVNCVEFLTGGR-IVSGSDDCSICVWDIQTQKCIETLKNAHK 319
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ V P ++S + D T+++W+
Sbjct: 320 NNVTFVT--PFKTWIISGAEDSTVKIWN 345
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83
I SS ++ +++W + EHE V I + + S I+ A G +
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE-----SAHPTILEA-TGSETK 302
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
+P F + D IK+W+ C+ TL+GH +++R H +I+S +DD+
Sbjct: 303 KSGKPGPFLLSG--SRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDK 360
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
T+RIW ++++ C L+ H H+V FH T VV+ S+DQT++VW+
Sbjct: 361 TLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 181 (68.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+++ TL GH D ++ F H + S S D TI++W
Sbjct: 119 VFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+Q CI + GH+H V P D +VSAS D+TI++W+++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVA 222
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP I+S+ + I++WD+ H V+ I F + + S M +
Sbjct: 116 FHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D IK+W C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + I S+S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W + C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S+S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVA 264
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + E++ E I +G K W + + + L GH + FH +
Sbjct: 65 VMELESKLNEAKEE---INIGGPIGQKRDPKEWIPRPPEK-YALSGHRSPVTRVIFHPVF 120
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+SAS+D TI++W ++ + L GH V F T ++ S S D TI++WD
Sbjct: 121 SVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 194 G 194
G
Sbjct: 181 G 181
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W C+ L GH+++V HP +VS + D+T+R+WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + I++W+ ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVR 238
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 216 (81.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/228 (27%), Positives = 99/228 (43%)
Query: 2 LTKFETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
L E A V +S+ H R + S+ + +++WD +L + H VR + F
Sbjct: 289 LQALEGHEAAVLSVSYSHDSR-LLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 61 NQQPIFVSGGKMIVMAYQ---GCI---LESRNE---PCLFRIKSVL----GDDYKIKVWN 107
+ + S V + G + LE + +F S L DD +K+W+
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
TL GH D++R+ F H+ + SASDD T++IW + + L GH +V
Sbjct: 408 TGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVR 467
Query: 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
F ++ SAS D+T+R+WD K+ G LV S+ H
Sbjct: 468 SVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Score = 210 (79.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 6 ETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF-HNQQ 63
E S V+ + F H R +L+S + +++WD +L + H VR + F H+ Q
Sbjct: 335 EGHSDLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 64 PIFVSGGKMIVMAYQ---GCI---LESRNE---PCLFRIKSVL----GDDYKIKVWNYKQ 110
+ + V + G + LE + +F S L DD +K+W+
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
TL GH D++R+ F H+ + SASDD+T+RIW + + L GH+ V
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 171 FHPTDDIVVSASLDQTIRVWDI 192
F ++ SAS DQT+R+WDI
Sbjct: 513 FSHDSRLLASASNDQTVRIWDI 534
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 37/157 (23%), Positives = 72/157 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF-HNQQPIFVSGG 70
V+ + F + S+ + +++WD +L + H VR + F H+ Q + +
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD 441
Query: 71 KMIVMAYQ---GCI---LESRNE---PCLF----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
V + G + LE + +F R+ + DD +++W+ ++ TL
Sbjct: 442 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL 501
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154
GH + + F H+ + SAS+DQT+RIW ++R+
Sbjct: 502 EGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARS 538
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172
C+ L GH + + + H+ + SASDD+T++IW ++ + L GH+ V F
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 173 PTDDIVVSASLDQTIRVWD 191
++ SAS D T+++WD
Sbjct: 348 HDSRLLASAS-DSTVKIWD 365
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 196 (74.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK WN +FTLL H +++R FH + +++S +DD+T+R+W ++ C+ +
Sbjct: 311 DRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAI 370
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V FH T V++ S+D + +VW+
Sbjct: 371 EAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 184 (69.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 40/105 (38%), Positives = 58/105 (55%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW- 148
L+ I + +D IKVW+Y+ + TL GH D + ++S S D +I++W
Sbjct: 117 LWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWD 176
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ Q+ +C+ L GH H V F PT D V+SAS D TI+ WDIS
Sbjct: 177 FGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 100 DYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D IK+W++ Q C+ +L GH + + F ++LSAS D TI+ W + C+
Sbjct: 169 DLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYT 228
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
GHN +V + + SASLDQT+ VW +
Sbjct: 229 FRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFA 263
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/172 (25%), Positives = 73/172 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSGGKMIV 74
FHP + S + I++WDY L H V I +Q + S I
Sbjct: 114 FHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIK 173
Query: 75 MAYQG----CILESR-NEPCLFRIKSV-LGD-------DYKIKVWNYKQRKCIFTLLGHL 121
+ G C+ + +E + + + GD D+ IK W+ C++T GH
Sbjct: 174 LWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHN 233
Query: 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
D++R ++ SAS DQT+ +W + +++ VL H H V C ++ P
Sbjct: 234 DWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAP 285
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D+ IK W+ C++T GH D++R ++ SAS DQT+ +W + +++ VL
Sbjct: 212 DHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVL 271
Query: 160 TGHNHYVMCAQFHP---------------TDDIVVSASLDQTIRVWDIS 193
H H V C ++ P + I+ S S D++I+ W+I+
Sbjct: 272 RDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Score = 60 (26.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
V ++F P ++LS+ + I+ WD + F H VR I N +F S
Sbjct: 194 VSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFAS 250
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 213 (80.0 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 34/92 (36%), Positives = 59/92 (64%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ C+ TL+GH +++R FH +++S +DD+T+RIW ++++ C+ L
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTL 376
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ H H+V FH VV+ S+DQT++VW+
Sbjct: 377 SAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+F + +D IKVW+Y+ TL GH D ++ F + S S D TI++W
Sbjct: 119 VFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWD 178
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+Q CI + GH+H V P D +VSAS D+T+++W+++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVA 222
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/171 (24%), Positives = 70/171 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GGKMIVM 75
FHP ++S+ + I++WDY H V+ I F + S M +
Sbjct: 116 FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIK 175
Query: 76 A--YQG--CILESRNEPCLFRIKSVL--GD-------DYKIKVWNYKQRKCIFTLLGHLD 122
+QG CI +++ GD D +K+W C+ T GH +
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 123 YIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
++R + + + S S+DQT+R+W ++ C L H H V C + P
Sbjct: 236 WVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 145 (56.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+T+++W + C+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTF 230
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 231 TGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA 264
Score = 137 (53.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
P++LS S D+TI++W + C+ L GH+++V FHP VVS + D+T+R+WD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYK 368
Query: 194 GLR 196
R
Sbjct: 369 NKR 371
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+ L GH + FH + ++SAS+D TI++W +++ + L GH V F T
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 175 DDIVVSASLDQTIRVWDISG 194
++ S S D TI++WD G
Sbjct: 162 GKLLASCSADMTIKLWDFQG 181
Score = 124 (48.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD +++W+YK ++C+ TL H ++ + FH P++++ S DQT+++W
Sbjct: 358 DDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 39 (18.8 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR 55
V ++ P I+S+ + +++W+ ++ F H VR
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVR 238
Score = 38 (18.4 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V+ +SF + S + I+LWD++ + H+ V +
Sbjct: 153 VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 198
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/185 (24%), Positives = 89/185 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 27 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 86
Query: 71 ----KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
++ V+A + C E R + S + + + + +GH +++R
Sbjct: 87 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI-----SEATGSEVGHDNWVRG 141
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
FH +ILS +DD+T+R+W ++++ C+ L H H+V FH T VV+ S+DQT
Sbjct: 142 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 201
Query: 187 IRVWD 191
++VW+
Sbjct: 202 VKVWE 206
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+
Sbjct: 3 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH +V + + ++ S S DQT+RVW ++
Sbjct: 63 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 96
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 140 SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
S D TI++W +Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 53
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/185 (24%), Positives = 89/185 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V ++ P I+S+ + I++W+ + ++ F H VR + + + S
Sbjct: 24 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 83
Query: 71 ----KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
++ V+A + C E R + S + + + + +GH +++R
Sbjct: 84 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI-----SEATGSEVGHDNWVRG 138
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
FH +ILS +DD+T+R+W ++++ C+ L H H+V FH T VV+ S+DQT
Sbjct: 139 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 198
Query: 187 IRVWD 191
++VW+
Sbjct: 199 VKVWE 203
Score = 152 (58.6 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 30/91 (32%), Positives = 52/91 (57%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+++ +CI T+ GH + + I+SAS D+TI++W Q+ C+ TGH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+V + + ++ S S DQT+RVW ++
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVA 93
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
TI++W +Q CI + GH+H V P D +VSAS D+TI++W++
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 50
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 202 (76.2 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++W+ C+ TL GH +++R FH +++SASDD+TIR+W +++ C+ L
Sbjct: 318 DKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTL 377
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+ FH V+S S+DQT++VW+
Sbjct: 378 YAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/188 (25%), Positives = 88/188 (46%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS-GG 70
V ++F P ++LS+ + I++W+ ++ + H VR + H + IF +
Sbjct: 196 VSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSN 255
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIK--VWNYKQRKCIFTLLGHLDYIRTTF 128
+ + + S++ C ++ ++ ++ W + D +
Sbjct: 256 DQTIRVW---LTNSKD--CKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKG-- 305
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
HH+ P++ S S D+TIRIW C+ L+GH+++V FHP +VSAS D+TIR
Sbjct: 306 -HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 189 VWDISGLR 196
VWD+ R
Sbjct: 365 VWDLRNKR 372
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/105 (31%), Positives = 60/105 (57%)
Query: 90 LFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW- 148
+F + +D I++W+++ + +L GH D ++ F + + S S D +I++W
Sbjct: 119 IFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD 178
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ QS CI + GH+H V F P D V+SAS D+TI++W+++
Sbjct: 179 FQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA 223
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 100 DYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D IK+W+++Q +CI T+ GH + + F ++LSAS D+TI++W + C+
Sbjct: 171 DLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKT 230
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
TGH +V + H I + S DQTIRVW
Sbjct: 231 YTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/182 (25%), Positives = 74/182 (40%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
A + + FHP ++S+ + I++WD+ H V+ + F Q + S
Sbjct: 109 ASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASC 168
Query: 70 G-----KM--IVMAYQGCILESRNEPCLFRIKSVL----GD-------DYKIKVWNYKQR 111
K+ +Y+ CI + SV GD D IK+W
Sbjct: 169 SADLSIKLWDFQQSYE-CIKTMHGHD--HNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
C+ T GH +++R H E + S+DQTIR+W S++C L H H V C +
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAW 285
Query: 172 HP 173
P
Sbjct: 286 AP 287
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD I+VW+ + ++C+ TL H + + FH +P+++S S DQT+++W
Sbjct: 359 DDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVW 408
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
F+L GH I FH + ++SAS+D TIRIW +++ L GH V F
Sbjct: 102 FSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ 161
Query: 175 DDIVVSASLDQTIRVWD 191
++ S S D +I++WD
Sbjct: 162 GKLLASCSADLSIKLWD 178
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 208 (78.3 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 50/166 (30%), Positives = 85/166 (51%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVS---GGKMIVMAYQGCILESRNEPCLFRIKS---- 95
++++F V+GI FH +P ++ GK+ + +Y L + +++
Sbjct: 5 VVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFI 64
Query: 96 ------VLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
V+G DD++I+V+NY + + H DYIR+ H P+IL++SDD TI++W
Sbjct: 65 ARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLW 124
Query: 149 YWQSR-NCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
W GH HYVM F+P D + SA LD+T+++W +
Sbjct: 125 NWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSL 170
Score = 193 (73.0 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVR-GICF 59
++ +F T+S RVKG+ FHP PWIL++L+NG I++W Y N+L++ E PVR G
Sbjct: 5 VVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFI 64
Query: 60 HNQQPIFVSGGKMIVMAYQ---G-CILESRNEPCLFRIKSV---------LGDDYKIKVW 106
+ I V + Y G + + P R +V DD IK+W
Sbjct: 65 ARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLW 124
Query: 107 NYKQR-KCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIW 148
N+ K T GH Y+ + F+ + P SA D+T++IW
Sbjct: 125 NWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIW 168
Score = 174 (66.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/96 (35%), Positives = 59/96 (61%)
Query: 100 DYKIKVWNYKQRKCIFTLLGH----LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155
D +K+W+ + FTL+ H ++Y+ + + P+++++SDD+TI++W +Q+++C
Sbjct: 162 DRTVKIWSLGSSQPNFTLIAHEAKGVNYV-DYYPQADKPYLITSSDDKTIKVWDYQTKSC 220
Query: 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ L GH V A FHP I+VS S D TIR W+
Sbjct: 221 VATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWN 256
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
DD IKVW+Y+ + C+ TL GHL + FH E P I+S S+D TIR W
Sbjct: 206 DDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFW 255
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 200 (75.5 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 34/94 (36%), Positives = 59/94 (62%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ ++K +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V FHP+ + +AS+D T++VWD+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/94 (30%), Positives = 55/94 (58%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + +++ASDD+T+++W + +
Sbjct: 82 DKTVRIWIPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF 139
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L+ H ++V CA+F P ++VSAS D+T+++WD
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 182 (69.1 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 41/123 (33%), Positives = 69/123 (56%)
Query: 73 IVMAYQGCILESRNEPCLFRIKS--VLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+V +++ C + R + R KS V G DD I+V+NY + + H DY+R+
Sbjct: 49 LVKSFEVCDVPVRAAKFVPR-KSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVV 107
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICV-LTGHNHYVMCAQFHPTDD-IVVSASLDQTI 187
H P+++S+SDD +++W W ++ + GH HYVM +P D+ +ASLD+T+
Sbjct: 108 HPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTV 167
Query: 188 RVW 190
+VW
Sbjct: 168 KVW 170
Score = 178 (67.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIWYWQSRNCIC 157
D +KVW + FTL GH + ++H E P+I+S +DD ++IW +Q++ C+
Sbjct: 164 DKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQ 223
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
L GH V FHP ++++ S D T+R+W + R
Sbjct: 224 TLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYR 262
Score = 158 (60.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 48/187 (25%), Positives = 87/187 (46%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K +S RVK + HP W+L++L+NG + +W+Y TL++ F+ + PVR F ++
Sbjct: 10 KLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRK 69
Query: 64 PIFVSGGK-MIVMAYQGCILESRNE--------------PCL-FRIKSVLGDDYKIKVWN 107
V+G M + + LE ++ P L + I S DD +K+W+
Sbjct: 70 SWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISS--SDDMLVKMWD 127
Query: 108 YKQRKCIF-TLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ + + + GH Y+ + + +AS D+T+++W + S L GH
Sbjct: 128 WDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKG 187
Query: 166 VMCAQFH 172
V C ++
Sbjct: 188 VNCVDYY 194
Score = 139 (54.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD+ +K+W+Y+ + C+ TL GH + + FH E P I++ S+D T+R+W+ +
Sbjct: 207 DDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETT 266
Query: 159 LTGHNHYVMCAQ 170
L V C Q
Sbjct: 267 LNYGLERVWCIQ 278
Score = 113 (44.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+ +WNY+ + + + +R F W+++ SDD IR++ + + + H
Sbjct: 39 VHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAH 98
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ Y+ HPT V+S+S D +++WD
Sbjct: 99 SDYLRSLVVHPTLPYVISSSDDMLVKMWD 127
Score = 109 (43.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 20 KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
++P+I+S + ++++WDY+ T ++ D H V +CFH + P+ ++G +
Sbjct: 198 EKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSE 249
Score = 75 (31.5 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 22/83 (26%), Positives = 45/83 (54%)
Query: 252 VKSGAWDESGVFIYTTS-NHIKYAIVNGDHGIIRTLDLPIYIT--KIKGNQVYYLDRECS 308
VK+G W FI+TT+ N I Y V G+ I +D P+Y+ K ++VY +D++ +
Sbjct: 523 VKTGFWI-GDCFIFTTALNRINY-YVGGEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLN 580
Query: 309 PHVLRIDPTEFKFKLALINHKYE 331
++ + +++ A++ ++
Sbjct: 581 VISYKLLLSVLEYQTAVMRRDFD 603
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 191 (72.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-YWQSRNCIC 157
DD I+V+NY + I + H DYIR H P+ILS+SDD I++W Y + +
Sbjct: 78 DDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQ 137
Query: 158 VLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDIS 193
V GH+HYVM ++P D + +ASLD+T++VW I+
Sbjct: 138 VFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSIN 174
Score = 179 (68.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 40/115 (34%), Positives = 65/115 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTT--FFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +KVW+ FTL GH I + F E P+++S +DD+ ++IW +QS+ C+
Sbjct: 165 DKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQ 224
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSM 211
L GH++ V +HP +++S S D T+++W S R ++ + GMG V SM
Sbjct: 225 TLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGMG-FVWSM 278
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 100 DYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D + +WNY+ + + + + + +RT F + WI++ SDD IR++ + + I
Sbjct: 36 DGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKS 95
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGMGKLVLSM 211
H Y+ C HPT ++S+S D I++WD G V G V+S+
Sbjct: 96 FEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSI 149
Score = 131 (51.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
DD +K+W+Y+ + C+ TL GH + + +H E P ILS S+D T+++W+
Sbjct: 208 DDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFHNQ 62
K T+S RVK + HP PWIL+SL++G + +W+Y +++ F+ PVR F +
Sbjct: 10 KLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAK 69
Query: 63 QPIFVSGGK-MIVMAYQGCILESRNE--------PCLF---RIKSVLG--DDYKIKVWNY 108
+ V+G + Y +E C+ + +L DD IK+W+Y
Sbjct: 70 KQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Query: 109 KQRKCIFTLL-GHLDYI 124
++ + GH Y+
Sbjct: 130 EKGWSNTQVFEGHSHYV 146
Score = 78 (32.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+ FE + ++ + HP P+ILSS + I+LWDY + + F+ H V I ++
Sbjct: 93 IKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWN 152
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 198 (74.8 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 35/94 (37%), Positives = 58/94 (61%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IKVW+ ++K +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 154 DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 213
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V FHP+ V +A +D T++VWD+
Sbjct: 214 YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + ++ASDD+TI++W + +
Sbjct: 113 DKTVRIWVPNIKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF 170
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L+ H ++V CA+F P ++VSAS D+T+++WD
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
>UNIPROTKB|P40765 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0005179 "hormone activity" evidence=IEA]
eggNOG:COG2319 PIR:A60412 STRING:P40765 Uniprot:P40765
Length = 35
Score = 179 (68.1 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQL 35
MLTKFETKSARVKGLSFHPKRPWIL+SLHNGVIQL
Sbjct: 1 MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQL 35
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 40/121 (33%), Positives = 69/121 (57%)
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
K I+ ++ CI + P F + +D IKVW+++ + TL GH + ++ F
Sbjct: 99 KHILTGHRNCINSVKFHPS-FSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ S S D TI++W +Q+ +C+ L GH+H V C +F P+ D ++S+S D+TI+VW
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 191 D 191
+
Sbjct: 218 E 218
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILE 83
I S ++ I+ W+ L + EH V + F I + G + + + +
Sbjct: 247 IASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQ 306
Query: 84 SRNEPCLFRIKSVL-GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASD 141
+ + + G D IK+W +C+ T +GH +++R FH ++LS D
Sbjct: 307 GPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 142 DQTIRIWYWQSRNCICVLT-GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
D+TIR+W CI + H H++ C F + + + +D I+VW +
Sbjct: 367 DKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 57/213 (26%), Positives = 83/213 (38%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
+ + FHP ++S+ + I++WD+ H V+ I F + S
Sbjct: 109 INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSA 168
Query: 72 MIVMA---YQ--GCIL----ESRNEPCLFRIKSVLGD-------DYKIKVWNYKQRKCIF 115
+ + +Q C+ N C+ S GD D IKVW CI
Sbjct: 169 DLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS--GDQLISSSRDKTIKVWEAATGYCIK 226
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD 175
TL+GH D++R + I S S+DQTI+ W C+ H+H V C F +
Sbjct: 227 TLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTAN 286
Query: 176 DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
I + SL T G K PG G LV
Sbjct: 287 IIDIPGSLLSTPE-----GKSKVKQGPG-GNLV 313
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++ + S D+TI+IW + C+ GH+++V +FHP ++S D+TIRVWDI+
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIA 376
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ ++K +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V FHP+ + +A +D T++VWD+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 29/94 (30%), Positives = 54/94 (57%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + ++ASDD+T+++W + +
Sbjct: 82 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF 139
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L+ H ++V CA+F P ++VSAS D+T+++WD
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW ++K +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 85 DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 144
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V FHP+ + +A +D T++VWD+
Sbjct: 145 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/96 (31%), Positives = 55/96 (57%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + ++ASDD+T+++W + +
Sbjct: 44 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 101
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
L+ H ++V CA+F P ++VSAS D+T+++WD S
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 191 (72.3 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IKVW ++K +F+L H++++R F + I SASDD+T+++W SR CI
Sbjct: 124 DDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHS 183
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H + +FHP+ + +A D+T++VWD+
Sbjct: 184 FCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDV 217
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D + +W + K +F H +R+ F + +++ASDD+TI++W + +
Sbjct: 83 DKTVCLWVPSVKGESTVFK--AHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLF 140
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L+ H ++V CA+F P ++ SAS D+T+++WD
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/101 (25%), Positives = 50/101 (49%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + DD +K+W+ R+CI + H + FH I +A D+T+++W +
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ H V FHP+ + +++AS D T+++ D+
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D I + F + S S D ++IW + + L GH VMC QF P+ +V
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 179 VSASLDQTIRVW 190
S S D+T+ +W
Sbjct: 78 ASGSRDKTVCLW 89
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 191 (72.3 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/93 (34%), Positives = 57/93 (61%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ +++ +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H +V FHP+ + +A +D T++VWD
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + +++ASDD+T+++W + +
Sbjct: 82 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLF 139
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
LT H ++V CA+F P ++VSAS D+T+++WD
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 134 (52.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ R+C+ + H ++ FH I +A D T+++W ++ +
Sbjct: 165 DDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQH 224
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H+ V FHP+ + +++AS D T+++ D+
Sbjct: 225 YQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D + F + S S D T+ IW+ + ++ TGH V C F P+ ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 179 VSASLDQTIRVW 190
S S D+T+R+W
Sbjct: 77 ASGSRDKTVRIW 88
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 194 (73.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 33/94 (35%), Positives = 57/94 (60%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW ++K +F+L H++++R F + I+SASDD+T+++W SR C+
Sbjct: 123 DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 182
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V FHP+ + +A +D T++VWD+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/96 (31%), Positives = 55/96 (57%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + ++ASDD+T+++W + +
Sbjct: 82 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 139
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
L+ H ++V CA+F P ++VSAS D+T+++WD S
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 192 (72.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 33/93 (35%), Positives = 57/93 (61%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ +++ +F+L H++++R F + I+SASDD+T+++W SR CI
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS 182
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H +V FHP+ + +A +D T++VWD
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W N K +F H +R+ F + +++ASDD+T+++W + +
Sbjct: 82 DKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLF 139
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
LT H ++V CA+F P ++VSAS D+T+++WD
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D + F + S S D T+ IW+ + ++ TGH V C F P+ ++
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 179 VSASLDQTIRVW 190
S S D+T+R+W
Sbjct: 77 ASGSRDKTVRIW 88
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 187 (70.9 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 40 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 99
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 100 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Score = 179 (68.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 81 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 140
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 141 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 200
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 201 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 251
Score = 165 (63.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 209 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 268
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 269 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 72
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 73 SNLLVSASDDKTLKIWDVS 91
Score = 50 (22.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 148 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 196
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 165 (63.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 165 (63.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 165 (63.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 165 (63.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 165 (63.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++SASDD+T++IW S C+ L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 182 (69.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ KC+ TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 226
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 227 KYILAATLDNTLKLWDYSKGK--CLKTYTCH----KNEKYC-IFANFSVTGGKWIVSG 277
Score = 156 (60.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T H + Y I F WI+S S+D + IW Q++ +
Sbjct: 235 DNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVV 294
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ HPT++I+ SA+L D+TI++W
Sbjct: 295 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
FTL GH + + F W+ S+S D+ I+IW ++GH + +
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 98
Query: 175 DDIVVSASLDQTIRVWDIS 193
+++VSAS D+T+++WD+S
Sbjct: 99 SNLLVSASDDKTLKIWDVS 117
Score = 50 (22.7 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 222
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 53/176 (30%), Positives = 86/176 (48%)
Query: 33 IQLWDYRMNTL--LEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ----GCI--LES 84
I+++DY+ + ++ HEGPV IC+ N Q +F + + CI LE
Sbjct: 482 IRVYDYKSQNMECVQTLKGHEGPVESICY-NDQYLFSGSSDHSIKVWDLKKLRCIFTLEG 540
Query: 85 RNEPC---LFRIKSVLG--DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA 139
++P L K + D IKVW+ K +C +TL H ++T +Y + S
Sbjct: 541 HDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQY--LFSG 598
Query: 140 SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
S+D+TI++W ++ C L GH +V T+ + S S D+TIRVW++ L
Sbjct: 599 SNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNLKSL 652
Score = 171 (65.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 59/220 (26%), Positives = 97/220 (44%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV---MAYQGC-- 80
SS H+ I++WD + + + H+ PV + +++ S K I + C
Sbjct: 519 SSDHS--IKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKY 576
Query: 81 ILESRNEP----CLFRIKSVLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
LES C+ G +D IKVW+ K +C +TL GH ++ T
Sbjct: 577 TLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN-- 634
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
+ S S D+TIR+W +S C L GH+ +V D ++ +AS D TI++WD+ L
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWV--EHMVICDKLLFTASDDNTIKIWDLETL 692
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHI 235
R G V + +W+ K V C+ ++ +
Sbjct: 693 RCNTTLEGHNATVQCLA----VWEDKKCVISCSHDQSIRV 728
Score = 168 (64.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 50/179 (27%), Positives = 77/179 (43%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI----VMAYQ 78
++ S + I++WD + + H V+ +C Q S K I + ++
Sbjct: 554 YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFR 613
Query: 79 GC--ILESRNE----PCLFRIKSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C L+ + C+ G D I+VWN K +C TL GH ++
Sbjct: 614 -CNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICD 672
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ + +ASDD TI+IW ++ C L GHN V C V+S S DQ+IRVW
Sbjct: 673 KL--LFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/101 (32%), Positives = 55/101 (54%)
Query: 100 DYKIKVWNYKQR--KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D I+V++YK + +C+ TL GH + + ++ +Y + S S D +I++W + CI
Sbjct: 479 DNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQY--LFSGSSDHSIKVWDLKKLRCIF 536
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198
L GH+ V + D + S S D+TI+VWD+ L K
Sbjct: 537 TLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLKTLECK 575
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 178 (67.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + KC+ T GH + Y I F WI+S S+D + IW QS+ +
Sbjct: 262 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVV 321
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+C HPT++I+ SA+L D+TI++W
Sbjct: 322 QKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K T+ GH I + + ++S SDD+T+++W + + L
Sbjct: 93 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTL 152
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH++YV C F+P +++VS S D+++R+WD+
Sbjct: 153 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/178 (30%), Positives = 81/178 (45%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW K + TL GH +Y+ F+ + I+S S D+++RIW ++ C+
Sbjct: 134 DDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVA----PGM--------G 205
L H+ V F+ ++VS+S D R+WD SG K + P + G
Sbjct: 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 253
Query: 206 KLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG 261
K +L+ + + +W Y K C +T H K E C I N V G W SG
Sbjct: 254 KYILAATLDNTLKLWDYSKGK--CLKTYTGH----KNEKYC-IFANFSVTGGKWIVSG 304
Score = 50 (22.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICF 59
V + F+ I+SS ++G+ ++WD L+ D+ PV + F
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF 249
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SASDD T+++W + I
Sbjct: 126 DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
T H V QFHP + ++ S S D+T+++WD+
Sbjct: 186 TSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
+++W+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 LRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
V C F P + SAS D T+++WD+
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Score = 148 (57.2 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 25/101 (24%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + G+D ++ +W + CI +L GH + F+ +++ S ++R+W +
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + + S S+D I++WD+
Sbjct: 94 AAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Score = 134 (52.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/191 (23%), Positives = 79/191 (41%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---- 70
+ F+ +++ +G ++LWD +L H+ + + FH SG
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSN 128
Query: 71 -KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
K+ + +GC+ + CL F + + DD +K+W+ K I H
Sbjct: 129 IKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188
Query: 121 LDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179
+ FH +EY + S S D+T+++W + N I G V F+P +
Sbjct: 189 TSAVNVVQFHPNEY-LLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLY 247
Query: 180 SASLDQTIRVW 190
S S + T+RV+
Sbjct: 248 SGS-ENTLRVY 257
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
+ + +D + IW NCI LTGH V C QF+ +++ VV+ SL ++R+WD+
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAA 95
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKY 220
+ G K +S HP+ +Y
Sbjct: 96 KILRTLMGH-KASISSLDFHPMGEY 119
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 54/200 (27%), Positives = 91/200 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
+ L F P I S + + +W+ + + +F H+ V + F + S +
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSR 80
Query: 72 MIVMAYQGCILESRNEPCLFR-----IKSVL-----------GDDYKIKVWNYKQRKCIF 115
+ + + E LFR ++SV DD IK+W+ ++K I
Sbjct: 81 DKTVRLW--VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI---CVLTGHNHYVMCAQFH 172
TL H +++R F + ++S SDD+T+++W SR I C G++ YV FH
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV---DFH 195
Query: 173 PTDDIVVSASLDQTIRVWDI 192
P+ + +AS D T+RVWDI
Sbjct: 196 PSSTCIATASSDNTVRVWDI 215
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 33/96 (34%), Positives = 56/96 (58%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W + K +F H +R+ F + +L+ASDDQ+I++W + IC
Sbjct: 81 DKTVRLWVPSVKGESVLFR--AHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
L HN++V CA+F P ++VS S D+T+++WD S
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/203 (24%), Positives = 86/203 (42%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--N 61
+F V + F P + SS + ++LW + F H G VR +CF
Sbjct: 55 RFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADG 114
Query: 62 QQPIFVSGGKMIVM--AYQG---CILESRNE--PCL-F----RIKSVLGDDYKIKVWNYK 109
Q + S + I + ++ C L N C F ++ + DD +K+W+
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R+ I T Y FH I +AS D T+R+W ++ + H+ V
Sbjct: 175 SRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNAL 234
Query: 170 QFHPTDDIVVSASLDQTIRVWDI 192
FHP+ + +++AS D T+++ D+
Sbjct: 235 SFHPSGNHLLTASSDSTLKILDL 257
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
GH D I + F I S S D ++ +W + ++ TGH V C QF P+ ++
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 179 VSASLDQTIRVW 190
S+S D+T+R+W
Sbjct: 76 ASSSRDKTVRLW 87
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 194 (73.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 58/226 (25%), Positives = 100/226 (44%)
Query: 5 FETKSARVKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
FE V +SF H R + S+ G +++WD R +L + H+ V + F
Sbjct: 385 FEDHEDSVMAVSFAHDSRR-LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 64 PIFVSGGK----MIVMAYQGCI---LESRNE---PCLF----RIKSVLGDDYKIKVWNYK 109
+ S I A G + LE N+ +F R+ + DD +K+W+
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
L H +++R+ F H+ + SASDD T++IW + + L GH+ V
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV 563
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
F P ++ SAS D T+++W + ++ G G++ +S+ H
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSH 609
Score = 180 (68.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/220 (25%), Positives = 96/220 (43%)
Query: 12 VKGLSF-HPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
VK + F H R + S+ +G +++WD TL H VR + F + + SG
Sbjct: 308 VKSVVFSHDSR-LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGS 366
Query: 71 K-MIVMAYQ---GCI---LESRNEPCL---F-----RIKSVLGDDYKIKVWNYKQRKCIF 115
V ++ G + E + + F R+ S D +K+W+ +
Sbjct: 367 NDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASA-SDGGNVKIWDTRTGSLQN 425
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD 175
L GH D + + F + + SASDD+T++IW+ + + L GHN +V F
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS 485
Query: 176 DIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
++ SAS D T+++WD + + +N V S+ H
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Score = 163 (62.4 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 48/195 (24%), Positives = 84/195 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF-HNQQPIFVSGG 70
V +SF P + S+ + +++W +L + H VR + F H+ + I +
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD 493
Query: 71 KMIVMAYQGCI------LESRNE---PCLF----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
M V + LES + +F R+ + DD +K+W+ TL
Sbjct: 494 DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTL 553
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH D + + F + + SASDD T++IWY + G + F T ++
Sbjct: 554 EGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNL 613
Query: 178 VVSASLDQTIRVWDI 192
+ SA D T+++WD+
Sbjct: 614 LASAMDDGTVKIWDM 628
Score = 149 (57.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
+ S GD +K+W+ TL GH +++++ F H+ + SASDD T++IW +
Sbjct: 278 LASASGDG-TVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT 336
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+L GHN V F ++ S S D+T+R+W+ + GL
Sbjct: 337 GTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGL 380
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 140
I ++ PC + D +K+WN C TL GH + + + ++SAS
Sbjct: 90 ISSAKFSPC-GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSAS 148
Query: 141 DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
DD+T++I+ + L GHN+YV C F+P +VVS S D+++R+WD+
Sbjct: 149 DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 135 (52.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K++ + TL GH +Y+ F+ + ++S S D+++RIW ++ CI
Sbjct: 149 DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT 208
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H+ V F+ ++ S S D +R+WD
Sbjct: 209 LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 132 (51.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W++ + K + GH + Y I F WI+S S+D I IW Q+R +
Sbjct: 277 DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIV 336
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ + HP +I+ S +L D I +W
Sbjct: 337 QCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 51 (23.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP 53
V +SF+ I S ++G++++WD ++ + E P
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 81 ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 140
I ++ PC + D +K+WN C TL GH + + + ++SAS
Sbjct: 90 ISSAKFSPC-GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSAS 148
Query: 141 DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
DD+T++I+ + L GHN+YV C F+P +VVS S D+++R+WD+
Sbjct: 149 DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 135 (52.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K++ + TL GH +Y+ F+ + ++S S D+++RIW ++ CI
Sbjct: 149 DDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKT 208
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L H+ V F+ ++ S S D +R+WD
Sbjct: 209 LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 132 (51.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W++ + K + GH + Y I F WI+S S+D I IW Q+R +
Sbjct: 277 DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIV 336
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ + HP +I+ S +L D I +W
Sbjct: 337 QCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 51 (23.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP 53
V +SF+ I S ++G++++WD ++ + E P
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 162 (62.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 148 (57.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLD 184
GH V +FHP + ++ S S D
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 162 (62.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 91 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 150
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 151 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 191
Score = 158 (60.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 38 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 97
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 98 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 138
Score = 136 (52.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 130 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 189
Query: 160 TGHNHYVMCAQFHPTD 175
GH V +FHP +
Sbjct: 190 PGHTGPVNVVEFHPNE 205
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 185 (70.2 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 94 KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
K + G D I+VWNY +CI T GH D + + + + I+S S D+T+++W+ +S
Sbjct: 354 KLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKV--IVSGSADKTVKVWHVES 411
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
R C L GH +V C + HP S S D TIR+WDI
Sbjct: 412 RTCY-TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMI-VMAY-QG-C 80
+ + ++ I +WD L+ + H V+ + F +++ I S K I V Y G C
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGEC 374
Query: 81 ILESR-NEPCLFRIKS-----VLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
I R + + + S V G D +KVW+ + R C +TL GH +++ H +
Sbjct: 375 ISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHVESRTC-YTLRGHTEWVNCVKLHPKS 433
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGH 162
S SDD TIR+W ++ +C+ V GH
Sbjct: 434 FSCFSCSDDTTIRMWDIRTNSCLKVFRGH 462
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 185 (70.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 42/107 (39%), Positives = 58/107 (54%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D IKVWNY +CI T GH D + + F ++ I+S S D T+R+W+ SR C
Sbjct: 440 GLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDSRTCY- 496
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204
L GH +V + H + + SAS D TIR+WD++ V GM
Sbjct: 497 TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGM 543
Score = 168 (64.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 53/169 (31%), Positives = 80/169 (47%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F S V L F+ R ++++ ++ I++W ++ H VR + F NQ+
Sbjct: 379 FTGHSDGVTCLQFN--RKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQK- 435
Query: 65 IFVSGG---KMIVMAYQ-G-CILESR-NEPCL----FRIKSVLGD--DYKIKVWNYKQRK 112
+SGG + V Y G CI R +E + F KS++ D+ ++VW+ R
Sbjct: 436 -LISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRT 494
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
C +TL GH D++ H I SASDD TIR+W S CI V G
Sbjct: 495 C-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGG 542
Score = 160 (61.4 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 89 CL-FRIKSVLGDDYK--IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145
CL F K ++ Y IK+W +C+ TL GH +R F ++ ++S D TI
Sbjct: 388 CLQFNRKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQK--LISGGLDSTI 445
Query: 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++W + + CI GH V+ F T+ +VS S D T+RVW +
Sbjct: 446 KVWNYHTGQCIATYRGHEDAVVSVDF--TNKSIVSGSADHTVRVWHV 490
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 94 KSVLGDDYKI-KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
KSV + +K+ K W K I T GH D + F+ +Y +++ S D TI+IW S
Sbjct: 356 KSVYSERFKLEKNWR-KGTHTIKTFTGHSDGVTCLQFNRKY--LMTGSYDTTIKIWKIDS 412
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
C+ LTGH V F + ++S LD TI+VW+
Sbjct: 413 GECVKTLTGHTKGVRALVFD--NQKLISGGLDSTIKVWN 449
Score = 48 (22.0 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 172 HPTDDIVVSASLDQTIRVWDIS 193
+PT ++++LD TI++WD++
Sbjct: 637 YPTH--FLTSALDNTIKLWDVA 656
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/93 (32%), Positives = 54/93 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I +W C TL GH I + + ++SASDD+T+++W +S C+ L
Sbjct: 60 DALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTL 119
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH+ +V C F+P +++VS S D+++++W++
Sbjct: 120 KGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ + KC+ TL GH D++ F+ I+S S D++++IW ++ C+
Sbjct: 101 DDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKT 160
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLVLSMKSKHPI 217
L+ H+ + F+ ++VS S D R+WD SG + +A G +S P
Sbjct: 161 LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADE-GNPPVSFVKFSPN 219
Query: 218 WKY 220
KY
Sbjct: 220 GKY 222
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W+Y + +C+ T GH + Y + +F W++S S+D + IW Q++ +
Sbjct: 229 DNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ A HPT +I+ SA+L D+TI+VW
Sbjct: 289 QRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W K TL GH + I + + I SASDD+TI+IW +S + L
Sbjct: 67 DKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTL 126
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
GH YV F+P +++VS S D+ +R+WD++
Sbjct: 127 KGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 59/209 (28%), Positives = 92/209 (44%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IK+W+ + K + TL GH +Y+ F+ + I+S S D+ +RIW + C +
Sbjct: 108 DDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKM 167
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD---------ISGLRKKNVA-----PGM 204
++ H+ V F+ +VVS S D T+R+WD IS K V+ P
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPN- 226
Query: 205 GKLVLS--MKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESG- 261
GK VL+ + + +W Y K C +T H K E C I V G W +G
Sbjct: 227 GKFVLAGTLDNTLRLWSYNNNKK-CLKTYTGH----KNEKYC-IFSTFSVTCGKWIVTGS 280
Query: 262 ----VFIYTTSNHIKYAIVNGDHGIIRTL 286
++IY + G ++ T+
Sbjct: 281 EDNLIYIYNLQTREIVQTLAGHEDVVLTV 309
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 100 DYKIKVWNYKQ-RKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155
D +++W+Y +KC+ T GH + Y I +TF WI++ S+D I I+ Q+R
Sbjct: 236 DNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREI 295
Query: 156 ICVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
+ L GH V+ HPT++I+ S +L D+++++W
Sbjct: 296 VQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
+TL GHL I + F + W+ SAS D+TI+IW L GH + +
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQD 99
Query: 175 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP------IWKYCKPVKY-- 226
++ SAS D+TI++WD+ + G + V + S +P + + V+
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGV-SFNPQSNLIVSGSFDENVRIWD 158
Query: 227 CNPKHTLHICNRKMEPLCNIHEN---TRVKSGAWDESGVFIY-TTSNHIKYAIVNGD 279
N + + +P+ +H N T V SG++D + V I+ TT+ + I D
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGT-VRIWDTTTGQLLNTISTED 214
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 48/161 (29%), Positives = 79/161 (49%)
Query: 46 KFDEHEGPVRGICFHNQQPIFVSG---GKMIVMAYQGCIL----ESRNEP---CLFRIKS 95
K H V+ + FH +P ++ G++ + Y L + + P C F +
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 96 ---VLG-DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
V G DD++++V+NY + + H DYIR H P++L++SDD TI+ + W
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 152 -SRNCICVLTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVW 190
S C+ GH+ YVM +P D + S+ LD T++VW
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVW 169
Score = 181 (68.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
K + + RVK + FHP PW+++S +NG + +W+Y TL+ FD ++ P+R F ++
Sbjct: 9 KLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARK 68
Query: 64 PIFVSGG---KMIVMAYQ-G-CILESRNEPCLFRIKSV---------LGDDYKIKVWNYK 109
FV G ++ V Y G + + P R V DD IK +N+
Sbjct: 69 NWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWD 128
Query: 110 QR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
KC+ T GH Y+ + + + S+ D T+++W + S L H+ V
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVN 188
Query: 168 CAQFHPTDD 176
++P D
Sbjct: 189 YVNYYPAGD 197
Score = 160 (61.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGH---LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +KVW++ FTL H ++Y+ + + P++++A DD I++W +Q++ C+
Sbjct: 163 DGTVKVWSFGSSVANFTLQAHDRGVNYVNY-YPAGDKPYLITAGDDNLIKVWDYQTKACV 221
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+L GH + V A FH I++S S D T+++W
Sbjct: 222 RILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
Score = 144 (55.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
GDD IKVW+Y+ + C+ L GH + + FFH ++P I+S S+D T++IW+ S + I
Sbjct: 205 GDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLI 263
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 99 DDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCI 156
DD IK +N+ KC+ T GH Y+ + + + S+ D T+++W + S
Sbjct: 118 DDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVAN 177
Query: 157 CVLTGHNHYVMCAQFHPTDD--IVVSASLDQTIRVWD 191
L H+ V ++P D +++A D I+VWD
Sbjct: 178 FTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWD 214
Score = 71 (30.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/78 (15%), Positives = 35/78 (44%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
++ F+ ++ +F ++ W + + +++++Y + +F+ H +R + H
Sbjct: 48 LVRSFDINDVPIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVH 107
Query: 61 NQQP-IFVSGGKMIVMAY 77
QP + S M + +
Sbjct: 108 PTQPFLLTSSDDMTIKCF 125
Score = 65 (27.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/60 (23%), Positives = 33/60 (55%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-TLLEKFDEHEGPVRGICFH 60
+T+FE ++ L HP +P++L+S + I+ +++ M+ ++ F+ H V + +
Sbjct: 91 VTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAIN 150
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 61 NQQPIFVSGGKMIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
+Q+ G ++ +G I + PC + D +K+WN C TL
Sbjct: 59 SQESTIPGAGYKLISTIEGHTKSISAVKFSPC-GKFLGTSSADKTVKIWNMSDLSCERTL 117
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + + + I++ASDD+T++I+ + L GH +YV C F+P +
Sbjct: 118 TGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSL 177
Query: 178 VVSASLDQTIRVWDI-SGLRKKNV 200
VVS S D+++R+WD+ +G+ K +
Sbjct: 178 VVSGSFDESVRIWDVRTGMCVKTL 201
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 94 KSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
KS++ DD +K++ K TL GH +Y+ F+ + ++S S D+++RIW +
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ C+ L H+ V F+ ++ S S D +R+WD
Sbjct: 194 TGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W+ + C+ TL H D + F+ + I S S D +RIW + C+ L
Sbjct: 184 DESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTL 243
Query: 160 TG-HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218
N V +F P ++S++LD T+++WD G GK L H
Sbjct: 244 VDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF----------GKGK-TLKQYQGHENN 292
Query: 219 KYC 221
KYC
Sbjct: 293 KYC 295
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+W++ + K + GH + Y I F WI+S S+D I +W Q++ +
Sbjct: 269 DNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVV 328
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASL--DQTIRVW 190
L GH V+ + HP +++ S +L D TIR+W
Sbjct: 329 QSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GC+ R CL F + + DD+ +K+W+ K +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH +EY + S S D+TIR W + + + G V F+P D
Sbjct: 186 PGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ + ++RV+
Sbjct: 244 CCLYSGCQDSLRVY 257
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GC+ R CL F + + DD+ +K+W+ K +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH +EY + S S D+TIR W + + + G V F+P D
Sbjct: 186 PGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ + ++RV+
Sbjct: 244 CCLYSGCQDSLRVY 257
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GC+ R CL F + + DD+ +K+W+ K +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH +EY + S S D+TIR W + + + G V F+P D
Sbjct: 186 PGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ + ++RV+
Sbjct: 244 CCLYSGCQDSLRVY 257
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GC+ R CL F + + DD+ +K+W+ K +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH +EY + S S D+TIR W + + + G V F+P D
Sbjct: 186 PGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ + ++RV+
Sbjct: 244 CCLYSGCQDSLRVY 257
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 176 (67.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 253
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 254 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 313
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 371
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 372 RGIACLQYR--DRLVVSGSSDNTIRLWDI 398
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 344 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 400
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 401 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 438
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 278
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMVTC 304
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 176 (67.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 253
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 254 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 313
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 371
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 372 RGIACLQYR--DRLVVSGSSDNTIRLWDI 398
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 344 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 400
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 401 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 438
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 278
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 279 EVLNTLIHHNEAVLHLRFSNGLMVTC 304
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 176 (67.0 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 217 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 272
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 273 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 332
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 333 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 390
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 391 RGIACLQYR--DRLVVSGSSDNTIRLWDI 417
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 363 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 419
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 420 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 457
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 297
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 298 EVLNTLIHHNEAVLHLRFSNGLMVTC 323
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 176 (67.0 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 218 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 273
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 274 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 333
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 334 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 391
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 392 RGIACLQYR--DRLVVSGSSDNTIRLWDI 418
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 364 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 420
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 421 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 458
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 298
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 299 EVLNTLIHHNEAVLHLRFSNGLMVTC 324
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160
Y I N + + GH + I F + +I+SASDD+T+++W ++ + I L
Sbjct: 51 YTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI 110
Query: 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
GH +Y C F+P +++VS S D+T+R+WD++ + V P
Sbjct: 111 GHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP 152
Score = 161 (61.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+W+ + I TL+GH +Y F+ + I+S S D+T+RIW + C+ V
Sbjct: 91 DDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
L H+ V F+ ++VS+S D R+WD SG
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD-SG 185
Score = 152 (58.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLD--Y-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +++WN K + T GH++ Y I + F I+S S+D + +W S+ +
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLL 278
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
L GH VM HPT++++ S SLD+T+R+W
Sbjct: 279 QKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/98 (27%), Positives = 50/98 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-CV 158
D +++W+ KC+ L H D + F+ + I+S+S D RIW + +C+ +
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
+ N V +F P ++ +LD T+R+W+IS +
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 46 (21.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGP 53
V + F+ I+SS ++G+ ++WD ++ + E P
Sbjct: 158 VTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENP 199
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 176 (67.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 345
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDI 430
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 376 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 432
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 433 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
Score = 129 (50.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTC 336
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 176 (67.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 345
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDI 430
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 376 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 432
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 433 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
Score = 129 (50.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTC 336
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 141 (54.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----C-IFTLLGHLDYIRTTFFHHEYP 134
CI S+ P LF G+D ++ W+ ++ C I + GHL + + H E
Sbjct: 135 CI--SKRHPYLFSG----GEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELD 188
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
+ S D +R+W +SR L GH + + + D V+++S+D TIR+WD+
Sbjct: 189 VLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRK 248
Query: 195 LRKKNVAPGMGKLVLSMKSKHP 216
+ + + K + SMKS HP
Sbjct: 249 SKTELLITNHSKSIRSMKS-HP 269
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI--C 157
D IK+W+++ L GH+ IR+ +P++ S +D+++R W + N C
Sbjct: 107 DSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGC 166
Query: 158 VLTG-HNHY--VMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ H H V HP D++ S D +RVWDI
Sbjct: 167 QIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDI 204
Score = 125 (49.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++VW+ + R TLLGH + I + + P ++++S D TIR+W +
Sbjct: 194 GKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTEL 253
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
++T H+ + + HP + VS + I+ W
Sbjct: 254 LITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 78 (32.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
W ++ + I++WD+ N+L H +R +C + P SGG+
Sbjct: 100 WYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGE 148
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDY-RMNT----LLEKFDEHEGPVRGICFHNQQPIF 66
++ L + P++ S + ++ WD R N+ + + H G V I H + +
Sbjct: 131 IRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVL 190
Query: 67 VSGGKMIVM 75
SGGK V+
Sbjct: 191 FSGGKDCVV 199
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 141 (54.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 80 CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK----C-IFTLLGHLDYIRTTFFHHEYP 134
CI S+ P LF G+D ++ W+ ++ C I + GHL + + H E
Sbjct: 135 CI--SKRHPYLFSG----GEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELD 188
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
+ S D +R+W +SR L GH + + + D V+++S+D TIR+WD+
Sbjct: 189 VLFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRK 248
Query: 195 LRKKNVAPGMGKLVLSMKSKHP 216
+ + + K + SMKS HP
Sbjct: 249 SKTELLITNHSKSIRSMKS-HP 269
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI--C 157
D IK+W+++ L GH+ IR+ +P++ S +D+++R W + N C
Sbjct: 107 DSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGC 166
Query: 158 VLTG-HNHY--VMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ H H V HP D++ S D +RVWDI
Sbjct: 167 QIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDI 204
Score = 125 (49.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++VW+ + R TLLGH + I + + P ++++S D TIR+W +
Sbjct: 194 GKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTEL 253
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
++T H+ + + HP + VS + I+ W
Sbjct: 254 LITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 78 (32.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
W ++ + I++WD+ N+L H +R +C + P SGG+
Sbjct: 100 WYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPYLFSGGE 148
Score = 62 (26.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDY-RMNT----LLEKFDEHEGPVRGICFHNQQPIF 66
++ L + P++ S + ++ WD R N+ + + H G V I H + +
Sbjct: 131 IRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVL 190
Query: 67 VSGGKMIVM 75
SGGK V+
Sbjct: 191 FSGGKDCVV 199
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 175 (66.7 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 203 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 258
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 259 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 318
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 319 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 376
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 377 RGIACLQYR--DRLVVSGSSDNTIRLWDI 403
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 349 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 405
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 406 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 443
Score = 129 (50.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 283
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 284 EVLNTLIHHNEAVLHLRFSNGLMVTC 309
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 181 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 236
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 237 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 296
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 297 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 354
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 355 RGIACLQYR--DRLVVSGSSDNTIRLWDI 381
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 327 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 383
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 384 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 421
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 261
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 262 EVLNTLIHHNEAVLHLRFSNGLMVTC 287
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 174 (66.3 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 330
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 331 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 389 RGIACLQYR--DRLVVSGSSDNTIRLWDI 415
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 361 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 417
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 418 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 295
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 296 EVLNTLIHHNEAVLHLRFSNGLMVTC 321
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 174 (66.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 61/209 (29%), Positives = 93/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD L+ H G V +C
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LC 285
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 286 LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVW 345
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 404 RGIACLQYR--DRLVVSGSSDNTIRLWDI 430
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 376 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 432
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 433 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 470
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNTG 310
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 311 EVLNTLIHHNEAVLHLRFSNGLMVTC 336
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 51/205 (24%), Positives = 95/205 (46%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ E S RV +++HP ++ ++ ++ +LWD + + + H V + FH
Sbjct: 301 IADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHP 360
Query: 62 QQPIFVSGGK------------MIVMAYQGCILE--SRN-EPCLFRIKSVLGDDYKIKVW 106
+ +GG VM +G I E S N P F + + GD+ KVW
Sbjct: 361 DGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDN-ACKVW 419
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ +QR+CI+T+ H + + + F ++ ++L+ + D T +IW + + L GH
Sbjct: 420 DLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 479
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVW 190
VM P ++ + S D+T ++W
Sbjct: 480 VMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 130 (50.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D +VW+ + +C+ L GH+ I + F + + S D ++W + R CI
Sbjct: 369 GLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIY 428
Query: 158 VLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV 208
+ H + V +F P D +++ + D T ++W G K +A GK++
Sbjct: 429 TIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVM 481
Score = 54 (24.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
F P ++++ +G+ +LW TL+ H V I FH Q
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQ 269
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + + I+S L + I++WD + L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDDK--IISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVW 330
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 331 DMASATDISLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 389 RGIACLQYR--DRLVVSGSSDNTIRLWDI 415
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW QS C+ VLTGH V+C Q+ + ++V+ S D T+RVWD+S
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVSSG 295
Query: 196 RKKNVAPGMGKLVLSMK 212
N + VL ++
Sbjct: 296 EVLNTLIHHNEAVLHLR 312
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 361 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 417
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 418 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 173 (66.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/209 (29%), Positives = 95/209 (45%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD + L+ H G V +C
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKQTLECLKILTGHTGSV--LC 270
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILES---RNEPCL-FRIKSVL----GDDYKIKVW 106
+ + V+G V + G +L + NE L R + L D I VW
Sbjct: 271 LQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVW 330
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 331 DMASPTDISLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGHK 388
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 389 RGIACLQYR--DRLVVSGSSDNTIRLWDI 415
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 361 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 417
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 418 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 455
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D +I+IW Q+ C+ +LTGH V+C Q+ + ++V+ S D T+RVWD++
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVNSG 295
Query: 196 RKKNVAPGMGKLVLSMK 212
N + VL ++
Sbjct: 296 EVLNTLIHHNEAVLHLR 312
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 183 (69.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
TGH+ V +FHP++ ++ S S D+TIR WD+
Sbjct: 186 TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 161 (61.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ VW+ + C+ +L GH I + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP V S SLD I++WD+
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Score = 148 (57.2 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TLLGH I + FH ++ S S D I++W + + CI H
Sbjct: 87 IRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V C +F P + SA+ D T+++WD++
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 144 (55.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 44/193 (22%), Positives = 80/193 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GCI + ++ CL F + + DD+ +K+W+ K +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + FH + S S D+TIR W + + + + V C F+P D
Sbjct: 186 TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNP-DGC 244
Query: 178 VVSASLDQTIRVW 190
+ ++RV+
Sbjct: 245 CLYGGFQDSLRVY 257
Score = 37 (18.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 231 HTLHICNRKMEPLCNIHENTRVKSG 255
H +C ++++ + NI +N SG
Sbjct: 616 HKCRLCYKQLKNISNIVKNKSGLSG 640
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ + TL GH I + ++ SASDD+TIRIW ++ R + L
Sbjct: 75 DGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCL 134
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
GH +YV F+P ++VS S D+T+R+W++ + P + ++S+
Sbjct: 135 KGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISV 186
Score = 155 (59.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/162 (27%), Positives = 78/162 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD I++W++++R + L GH +Y+ + F+ ++S S D+T+RIW Q C+ +
Sbjct: 116 DDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRM 175
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLVLSMKSKHPI 217
L H+ ++ + +AS D R+WD+ SG K + + + LS
Sbjct: 176 LPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPIN-VPLSNLQFTEN 234
Query: 218 WKYCKPVKYCNPKHTLHICNR-KMEPLCNIHENTRVKSGAWD 258
KY V N + L R ++ + + H NTR S +WD
Sbjct: 235 RKYLL-VSNLNSQIRLWDYRRNRVVRIFDSHVNTRY-SMSWD 274
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 60/210 (28%), Positives = 94/210 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + + +S KG L + ++ I+S L + I++WD L+ H G V +C
Sbjct: 210 LQRIQCRSENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LC 265
Query: 59 FHNQQPIFVSGGKMIVMAY-----QGCILES---RNEPCL-FRIKSVL----GDDYKIKV 105
+ + V+G ++ G +L + NE L R + L D I V
Sbjct: 266 LQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAV 325
Query: 106 WNYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
W+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 326 WDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWSTSTCEFVRTLNGH 383
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 384 KRGIACLQYR--DRLVVSGSSDNTIRLWDI 411
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W +
Sbjct: 357 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 413
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 414 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDL 451
Score = 120 (47.3 bits), Expect = 0.00072, P = 0.00072
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI-RVWDISG 194
I+S D +I+IW S C+ VLTGH V+C Q+ + ++V+ S D T+ RVWD++
Sbjct: 233 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVSRVWDVNT 290
Query: 195 LRKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 291 GEVLNTLIHHNEAVLHLRFSNGLMVTC 317
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 22 PWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-----KMIVMA 76
P + S N +DY++N + F HE PV I H + +S KM+ +
Sbjct: 334 PNVTSCTENVSAAKFDYKLNNI---FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLP 390
Query: 77 YQGCILESRNEP-----CLF-----RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
+L C F ++ + GD IK+W+ + +C TL GH + +
Sbjct: 391 QGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDS-TIKLWDLNKGECTLTLEGHNHAVWS 449
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
+H ++ SAS D T +IW S C L GH V +F P +I+++AS D+T
Sbjct: 450 CTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKT 509
Query: 187 IRVWD 191
+ VWD
Sbjct: 510 LSVWD 514
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147
PC + S +D K+ Q + T GH D++ FH + ++S D TI++
Sbjct: 370 PCRDYLISC-SEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKL 428
Query: 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
W C L GHNH V +H D V SASLD T ++WD++ R
Sbjct: 429 WDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSER 477
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/205 (24%), Positives = 82/205 (40%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQ 63
F V + HP R +++S + + ++ +L H + G CFH +
Sbjct: 356 FRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 415
Query: 64 PIFVSGGKMIVMAY---QG-CIL--ESRNEPCLFRIKSVLGD-------DYKIKVWNYKQ 110
+ S G + + +G C L E N GD D K+W+
Sbjct: 416 KLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNS 475
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
+C +TL GH D + + F +L+AS D+T+ +W ++ C L GH H V A
Sbjct: 476 ERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDAT 535
Query: 171 FHPTDDIVVSASLDQTIRVWDISGL 195
F P I+ S ++WD L
Sbjct: 536 FTPRGHIIASCDARGVTKLWDFRKL 560
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 173 (66.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 56/198 (28%), Positives = 84/198 (42%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G+SF P R ++LSS +G I+LW + T L + H PV F FVS
Sbjct: 499 SGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVS 558
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 559 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCV 618
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ S S D + +W I L GH + +F
Sbjct: 619 RIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRD 678
Query: 175 DDIVVSASLDQTIRVWDI 192
+I+ S S+D T+R+WD+
Sbjct: 679 GEIIASGSIDNTVRLWDV 696
Score = 142 (55.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 50 HEGPVRGICFHNQQPIFVSG---GKMIVMAYQG--CIL--ESRNEPCL------FRIKSV 96
H GPV G+ F + +S G + + + Q C++ + N P F V
Sbjct: 498 HSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFV 557
Query: 97 LGDDYKI-KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC 155
G ++ ++W + + GHL + T FH ++ + S D+T+R+W + NC
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNC 617
Query: 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ + TGH + F P + S S D + +WDI GL
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGL 658
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 181 (68.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ C+F GH +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V +FHP + ++ S S D+TIR WD+
Sbjct: 186 PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 162 (62.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TL+GH I + FH ++ S S D I++W + + C+ GH
Sbjct: 87 IRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ V C +F P + SA+ D T+++WD++ + + PG
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Score = 158 (60.7 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ +W+ + CI +L GH + + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP + V S S D I++WDI
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Score = 129 (50.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + + I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQ 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GC+ R CL F + + DD+ +K+W+ K +
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH +EY + S S D+TIR W + + + G V F+P D
Sbjct: 186 PGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ + ++RV+
Sbjct: 244 CCLYSGCQDSLRVY 257
Score = 37 (18.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 417 LTVSKSFFEGSFETAFKLLH 436
L SKS G +AF+ LH
Sbjct: 629 LVKSKSSLSGRHGSAFRELH 648
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/196 (21%), Positives = 89/196 (45%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
RV ++FHP ++ ++ ++ +LWD T + + H PV + +H+ + V+GG
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGG 414
Query: 71 K---------------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIF 115
M + + G + P F I + D K+W+ ++R+ ++
Sbjct: 415 LDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATG-SQDNTCKIWDLRRRQPVY 473
Query: 116 TLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
T+ H + I + E ++++ S D T +IW ++ + L GH++ V+ P
Sbjct: 474 TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPN 533
Query: 175 DDIVVSASLDQTIRVW 190
+ + S D+T ++W
Sbjct: 534 SQYIATTSFDRTFKLW 549
Score = 128 (50.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDY-IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
G D +K+W + + I + GH+ + + FH ++ +A D + R+W + + +
Sbjct: 329 GHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEV 388
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +H ++V+ LD RVWD+
Sbjct: 389 LHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDL 424
Score = 37 (18.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
V +F +L+S +G+ +LW L + H V G+
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGV 309
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR-NCICV 158
D + +W+ I GH I + + + SASDD T+RIW +S C+ V
Sbjct: 64 DKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV 123
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
L GH ++V C F+P +++VS S D+TIR+W++
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 27/94 (28%), Positives = 53/94 (56%)
Query: 99 DDYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
DD +++W+ + +C+ L GH +++ F+ I+S S D+TIRIW ++ C+
Sbjct: 105 DDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVR 164
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
++ H+ + F+ ++VSAS D + ++WD
Sbjct: 165 MIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDY---IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +K+ NY K + GH + I + F +I+S S+D + +W Q+RN +
Sbjct: 234 DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSAS--LDQTIRVW 190
L GH V+ HP + + S+ LD+TIR+W
Sbjct: 294 QRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ + + P+ +L + H+G LW+ + T+++ HE P+ + + N +S
Sbjct: 138 INTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQA---HESPILTMKYSNHDEWLLS 194
Query: 69 GGKMIVMAYQGCILESRNEPCLFR--IKSVL-----------GDDYKIKVWNYKQRKCIF 115
G + + Y + N ++ + GDD IK+WN+ K
Sbjct: 195 GDQNGTVKYWQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEER 254
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-- 173
TL GH +++ +H I+S S D +++W +S NC+ L G H V +F P
Sbjct: 255 TLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNG 314
Query: 174 TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
T ++ S S D++ R++D+ ++ V + LS + HPI
Sbjct: 315 TARLLASVSRDRSCRIFDLRTMKDMLVIRD-SETDLSCVAWHPI 357
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ + + P+ +L + H+G LW+ + T+++ HE P+ + + N +S
Sbjct: 138 INTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQA---HESPILTMKYSNHDEWLLS 194
Query: 69 GGKMIVMAYQGCILESRNEPCLFR--IKSVL-----------GDDYKIKVWNYKQRKCIF 115
G + + Y + N ++ + GDD IK+WN+ K
Sbjct: 195 GDQNGTVKYWQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEER 254
Query: 116 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP-- 173
TL GH +++ +H I+S S D +++W +S NC+ L G H V +F P
Sbjct: 255 TLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNG 314
Query: 174 TDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
T ++ S S D++ R++D+ ++ V + LS + HPI
Sbjct: 315 TARLLASVSRDRSCRIFDLRTMKDMLVIRD-SETDLSCVAWHPI 357
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 167 (63.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 45/194 (23%), Positives = 79/194 (40%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W + + VI++WD L H VRG+ + P S G+
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE 234
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + + G D ++W+ + + + T
Sbjct: 235 DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTI-DVLATSGRDSTARIWDMRTKANVHT 293
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + + P I++ S D T+R+W + +C LT H V HP+
Sbjct: 294 LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLY 353
Query: 177 IVVSASLDQTIRVW 190
+ SAS D I+ W
Sbjct: 354 MFASASPDN-IKQW 366
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 29/101 (28%), Positives = 49/101 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R ++P++ S +D+ ++ W + I
Sbjct: 193 DRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHY 252
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNV 200
GH V HPT D++ ++ D T R+WD+ K NV
Sbjct: 253 HGHLSAVYSLALHPTIDVLATSGRDSTARIWDMR--TKANV 291
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
S P LF G+D ++K W+ + K I GHL + + H + ++ D
Sbjct: 223 STKHPYLFSC----GEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDS 278
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
T RIW +++ + LTGH + V T+ +++ S D T+R+WD++
Sbjct: 279 TARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLA 328
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 168 (64.2 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 270 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 326
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 327 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 368
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 371
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 372 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 431
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 432 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 487
Query: 192 I 192
I
Sbjct: 488 I 488
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 360 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 417
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 418 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 473
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 341 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 396
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 397 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 456
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY---VMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G N + V C QF+
Sbjct: 457 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 514
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 515 --NFVITSSDDGTVKLWDL 531
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 303 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 360
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 361 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 420
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 421 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 457
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 168 (64.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 312 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 368
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 369 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 410
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 414 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 473
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 474 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 529
Query: 192 I 192
I
Sbjct: 530 I 530
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 460 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 515
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/199 (25%), Positives = 93/199 (46%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 438
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 439 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG---HNHYVMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G H V C QF+
Sbjct: 499 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK 556
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 557 --NFVITSSDDGTVKLWDL 573
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 54/217 (24%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + + L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 345 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 402
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 463 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 499
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 310 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 366
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 367 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 408
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 411
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 412 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 471
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 472 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 527
Query: 192 I 192
I
Sbjct: 528 I 528
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 400 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 457
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 458 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 513
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 381 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 436
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 437 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 496
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY---VMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G N + V C QF+
Sbjct: 497 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 554
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 555 --NFVITSSDDGTVKLWDL 571
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 343 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 400
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 401 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 460
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 461 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 497
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 312 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 368
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 369 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 410
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 414 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 473
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 474 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 529
Query: 192 I 192
I
Sbjct: 530 I 530
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 460 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 515
Score = 146 (56.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/199 (25%), Positives = 93/199 (46%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 383 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 438
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 439 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG---HNHYVMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G H V C QF+
Sbjct: 499 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK 556
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 557 --NFVITSSDDGTVKLWDL 573
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 345 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 402
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 463 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 499
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 168 (64.2 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 390 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 446
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 447 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 488
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 491
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 492 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 551
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 552 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 607
Query: 192 I 192
I
Sbjct: 608 I 608
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 480 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 537
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 538 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 593
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 461 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 516
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 517 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 576
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY---VMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G N + V C QF+
Sbjct: 577 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 634
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 635 --NFVITSSDDGTVKLWDL 651
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 423 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 480
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 481 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 540
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 541 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 577
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 168 (64.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 395 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 451
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 452 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 493
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 496
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 497 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 556
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 557 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 612
Query: 192 I 192
I
Sbjct: 613 I 613
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 485 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 542
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 543 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 598
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 466 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 521
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 522 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 581
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY---VMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G N + V C QF+
Sbjct: 582 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 639
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 640 --NFVITSSDDGTVKLWDL 656
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 55/217 (25%), Positives = 94/217 (43%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W + K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 428 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 485
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 486 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 545
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 546 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 582
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 164 (62.8 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + L+F+P+ + + + +LWD + H + +CF+
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD 232
Query: 65 IFV--------------SGGKMIVMA-YQGCI-LESRNEPCLFRIKSVLGDDYKIKVWNY 108
V SG K+ V++ ++G I N C + L D KVW+
Sbjct: 233 RLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASL--DKSCKVWDA 290
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
+ +C+ TLLGH D + F++ I +AS D T R++ + C+C L GH +
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISK 350
Query: 169 AQFHPTDDIVVSASLDQTIRVW 190
F+ V++AS+D+T RVW
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVW 372
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKM-- 72
++F+ ++ ++ ++WD L + H V I F+N V+ G
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDK 157
Query: 73 ---IVMAYQG-CILESRNEP----CL-FRIKSVL---GD-DYKIKVWNYKQRKCIFTLLG 119
+ A G C R CL F +S L G D K+W+ + + + TL G
Sbjct: 158 TCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG 217
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179
H I + F+ +++ S D T +W S + VL+GH + C QF+ ++
Sbjct: 218 HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIA 277
Query: 180 SASLDQTIRVWDISG 194
+ASLD++ +VWD G
Sbjct: 278 TASLDKSCKVWDAEG 292
Score = 145 (56.1 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICV 158
D K+W+ + + TL GH + + F++ Y + + S D+T ++W ++ C
Sbjct: 113 DRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYT 172
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLV 208
GH ++C F+P +V + S+D T ++WD+ SG +A +++
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII 223
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D K+W+ + KC +T GH I F+ + + + S D T ++W +S + L
Sbjct: 156 DKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL 215
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
GH ++ F+ T D +V+ S D T +WD+ RK +V G
Sbjct: 216 AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSG 259
Score = 128 (50.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+V++ +C+ L GH I F+ + +L+AS D+T R+W ++ C+ VL GH+
Sbjct: 328 RVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHS 387
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ F+ D +++ S D T R+W
Sbjct: 388 DEIFSCAFNYEGDTIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 168 (64.2 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
C RI S DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W
Sbjct: 443 CGNRIVSG-SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNI--IISGSTDRTLKVW 499
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ CI L GH V C H + VVS S D T+RVWDI
Sbjct: 500 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 541
Score = 162 (62.1 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++W+ + H VR C H + VSG + + G
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 544
Query: 80 -CILESRNEPCLFRI------KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C+ R + V G D+ +KVW+ + C+ TL GH + + + F
Sbjct: 545 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 604
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NCI LTGH + + D+I+VS + D T+++WD
Sbjct: 605 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILVSGNADSTVKIWD 660
Query: 192 I 192
I
Sbjct: 661 I 661
Score = 149 (57.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 52/199 (26%), Positives = 94/199 (47%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H KR ++S + +++WD L H VR + + ++ VS
Sbjct: 514 TSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVS 569
Query: 69 GG-KMIVMAY----QGCI--LESR-NEPCLFR---IKSVLGD-DYKIKVWNYKQRKCIFT 116
G +V + + C+ L+ N + I V G D I+VW+ + CI T
Sbjct: 570 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 629
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG-HNHY--VMCAQFHP 173
L GH T+ + ++S + D T++IW ++ C+ L G H H V C QF+
Sbjct: 630 LTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK 687
Query: 174 TDDIVVSASLDQTIRVWDI 192
+ V+++S D T+++WD+
Sbjct: 688 --NFVITSSDDGTVKLWDL 704
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++VW+ + +C+ L+GH+ +R ++ ++S + D +++W ++ C+ L
Sbjct: 533 DATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWDPETETCLHTL 590
Query: 160 TGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
GH + V QF D I VVS SLD +IRVWD+ + G L M+ K I
Sbjct: 591 QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 646
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 55/217 (25%), Positives = 93/217 (42%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTF-FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH 164
W K L GH D++ T F I+S SDD T+++W + C+ L GH
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV--LSMKSKHPIW---K 219
V +Q D+I++S S D+T++VW+ + G V + + K +
Sbjct: 476 GVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 533
Query: 220 YCKPVKYCNPKHTLHICNRKMEPL-CNIHENTRVKSGA-------WD-ESGVFIYTTSNH 270
V LH+ + + C ++ RV SGA WD E+ ++T H
Sbjct: 534 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 593
Query: 271 IK--YAI-VNGDHGIIRTLDLPIYITKIK-GNQVYYL 303
Y++ +G H + +LD I + ++ GN ++ L
Sbjct: 594 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL 630
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 165 (63.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 29/94 (30%), Positives = 51/94 (54%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW +++K +++L H +++R F + I S DD+T+R+W S CI +
Sbjct: 122 DDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINI 181
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
T + F+ + + S+ D TI++WDI
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/108 (25%), Positives = 57/108 (52%)
Query: 100 DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
D +++W + K +F H +R+ F + +++ASDD+++++W + + +
Sbjct: 81 DQTVRLWTPSIKGESTVFK--AHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLY 138
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 205
L H ++V CA+F P ++ S D+T+R+WD S + N+ G
Sbjct: 139 SLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYG 186
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D + +WN + F +GH D I F + S+S DQT+R+W + V
Sbjct: 39 DKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVF 98
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198
H V F +V+AS D++++VW + RKK
Sbjct: 99 KAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE--RKK 135
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 142 (55.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W+ +Q + GH + + F ++ SA +DQ +++W S L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM-GKLV 208
GH + F P ++ SAS+D ++RVWDI A G G+LV
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELV 110
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/203 (24%), Positives = 86/203 (42%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGD 232
Query: 65 IFVSG-------------GKMIVMAYQGCI---LESRNEPCLFRIKSVLGDDYKIKVWNY 108
++G G+ + + C S N C + + D K+W+
Sbjct: 233 RIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSM--DKTCKLWDA 290
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
KC+ TL GH D I + F + I +AS D T RI+ +R CI L GH +
Sbjct: 291 TNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISK 350
Query: 169 AQFHPTDDIVVSASLDQTIRVWD 191
F+P + +++ S D+T R+WD
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIWD 373
Score = 146 (56.5 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
SA + LSF+ I++ + + +WD + H + F+ + ++
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILT 278
Query: 69 GG--KMIVM--AYQG-CI--LESRNEPCL---F----RIKSVLGDDYKIKVWNYKQRKCI 114
G K + A G C+ L ++ L F ++ + D ++++ RKCI
Sbjct: 279 GSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCI 338
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
L GH I F+ + +L+ S D+T RIW Q+ C+ VL GH + F+
Sbjct: 339 AKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 175 DDIVVSASLDQTIRVW 190
+IV++ S D T R+W
Sbjct: 399 GNIVITGSKDNTCRIW 414
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D K+W+ + KC T GH I F+ + + + S D T ++W Q+ + L
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL 215
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
GH+ ++ F+ + D +++ S D T+ VWD RK N+ G
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIG 259
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICV 158
D K+W+ + + TL GH + + F++ Y I + S D+T ++W ++ C
Sbjct: 113 DRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT 172
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
GH ++C F+P +V + S+D T ++WDI + G ++S+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISL 225
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/182 (23%), Positives = 80/182 (43%)
Query: 25 LSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG------KMIVMAYQ 78
++ ++ +LWD L + H V I F+N ++ G K+ +
Sbjct: 108 ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 79 GCILESRNEP----CL-FRIKSVL---GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
C R CL F +S L G D K+W+ + + ++TL GH I + F
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ I++ S D T+ +W + + +L GH + A F+ ++++ S+D+T ++
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Query: 190 WD 191
WD
Sbjct: 288 WD 289
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
VM + + R+ P LF + +D +K W+ ++ + I GHL +RT H
Sbjct: 182 VMTVRDVAVSDRH-PYLFSVS----EDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTL 236
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
I +A D I++W ++R + L GH + Q P D VVS+S D T+R+WD+
Sbjct: 237 DLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDV 295
Score = 151 (58.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +KVW+ K TL GH+ +R +P++ S S+D+T++ W + I
Sbjct: 160 NDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRD 219
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++ +A D I++WD+
Sbjct: 220 YYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDM 253
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/101 (31%), Positives = 63/101 (62%)
Query: 99 DDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFHHEYPW-ILSASDDQTIRIWYW-QSRNC 155
+D IK W+++ K F++ H + IR F+ P+ +LSA DD ++IW Q+R+
Sbjct: 206 NDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDP 265
Query: 156 ICVLTGHNHYVMCAQFHPT-DDIVVSASLDQTIRVWDISGL 195
+ + +GHNH++ A+F+ D +++++S D T+++W++ L
Sbjct: 266 VKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLWNLYSL 306
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 163 (62.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 98 GDDYKIKVW-NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
G D +I++W N Q KC + H IR+ F + ++LS+SDD+T+++W Q + +
Sbjct: 108 GQDRQIRLWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFM 166
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
C GH ++V P +V S S D+T+ +WD++
Sbjct: 167 CSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLN 203
Score = 120 (47.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 43/181 (23%), Positives = 73/181 (40%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
++ +SF ++LSS + ++LW + + F H+ VR + SG
Sbjct: 134 IRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSD 193
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
+ +L N + S L D+ KI N + H+D + FH
Sbjct: 194 DKTV-----MLWDLNFQKIVSKYSTLDDNVKISQIN--------SYSDHMDTVSQVLFHP 240
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S+S D I+I +S I H+ V HPT + SA D I++WD
Sbjct: 241 DGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWD 300
Query: 192 I 192
+
Sbjct: 301 L 301
Score = 48 (22.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 442 KNFLPYRQM--FLNSYLQSRTAYSTLPLLAP---VMAFPTRKGPGIKENSHPATNIKLEQ 496
KN +P+ F S +Q + +S P L +P+ P ++E NI E
Sbjct: 483 KNAIPFHPSSEFQQSAVQQQ--FSQQPKLVVNNGTATYPSNFVPKVEEE-----NIMTEA 535
Query: 497 LIAKIQQCY-QLTTSGKFVDAIE 518
+ A +QQ Y +L T +++ +E
Sbjct: 536 IAASMQQIYSRLDTMFQYMTNLE 558
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 168 (64.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/126 (33%), Positives = 66/126 (52%)
Query: 94 KSVLGD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
K V G D ++VW+ +Q C+ L+GHL +R ++ I+S + D ++IW+ +
Sbjct: 1087 KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCV--QYDGKLIVSGAYDYMVKIWHPER 1144
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDI-VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
+ C+ L GH + V QF D + VVS SLD +IRVWD+ K+ G L M
Sbjct: 1145 QECLHTLQGHTNRVYSLQF---DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM 1201
Query: 212 KSKHPI 217
+ + I
Sbjct: 1202 ELRQNI 1207
Score = 166 (63.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/94 (38%), Positives = 51/94 (54%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW+ KC+ TL+GH + ++ I+S S D+T+++W S C+
Sbjct: 1013 DDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNI--IISGSTDRTLKVWDMDSGACVHT 1070
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
L GH V C H + VVS S D T+RVWDI
Sbjct: 1071 LQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDI 1102
Score = 161 (61.7 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----QG 79
I+S + +++WD + H VR C H VSG + + QG
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSKVVSGSRDATLRVWDIEQG 1105
Query: 80 -C--ILESRNEP--CL-FRIKSVLGD--DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
C +L C+ + K ++ DY +K+W+ ++++C+ TL GH + + + F
Sbjct: 1106 SCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDG 1165
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ ++S S D +IR+W ++ NC L GH + +I+VS + D T++VWD
Sbjct: 1166 LH--VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR--QNILVSGNADSTVKVWD 1221
Query: 192 IS 193
I+
Sbjct: 1222 IT 1223
Score = 142 (55.0 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 50/199 (25%), Positives = 91/199 (45%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
++ V+ + H + ++S + +++WD + L H VR C + VS
Sbjct: 1075 TSTVRCMHLHGSK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVR--CVQYDGKLIVS 1130
Query: 69 GGK--MIVMAY---QGCI--LESR-NEPCLFRIKS---VLGD-DYKIKVWNYKQRKCIFT 116
G M+ + + Q C+ L+ N + V G D I+VW+ + C T
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHT 1190
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN-HY--VMCAQFHP 173
L+GH T+ ++S + D T+++W + C+ L+G N H+ V C QF+
Sbjct: 1191 LMGHQSL--TSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS 1248
Query: 174 TDDIVVSASLDQTIRVWDI 192
VV++S D T+++WD+
Sbjct: 1249 R--FVVTSSDDGTVKLWDV 1265
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 50/210 (23%), Positives = 92/210 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S+ V+ ++F P + S + I+LW+ ++L + H V + F +
Sbjct: 80 EGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL 139
Query: 66 F---VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK-IKVWNYKQRKCIFTLLGHL 121
+ + K + + +L P + S G K IK+W+ TL GH
Sbjct: 140 WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLAS--GSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA 181
+++ F + + S S+D TI++W S + L GH++ + F P ++ S
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 182 SLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
S D TI++WD + ++ G +VLS+
Sbjct: 258 SSDATIKLWDTATGSFRHTLKGHSDMVLSV 287
Score = 156 (60.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 51/215 (23%), Positives = 91/215 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
L E S ++ ++F P + S ++ I+LWD L + + H V+ + F
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 62 QQPIFVSGGKMIVMAYQGCILESRN---EPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLL 118
+ SG + +S E R++SV ++WN T+
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-QLWNPAIGSLKHTIE 152
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC--VLTGHNHYVMCAQFHPTDD 176
GH D++ + F + + S S ++TI++W S C L GH+++V+ F P
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLW--DSATCGLKHTLGGHSNWVLPLVFSPDGR 210
Query: 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
++ S S D TI++WD K+ G + S+
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 58/215 (26%), Positives = 93/215 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S RV+ ++F P NG QLW+ + +L + H V + F +
Sbjct: 122 EGHSDRVESVAFSP----------NG--QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQL 169
Query: 66 FVSGG--KMIVM---AYQGC--ILESRNE---PCLF----RIKSVLGDDYKIKVWNYKQR 111
SG K I + A G L + P +F R+ + +D IK+W+
Sbjct: 170 LASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSG 229
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
TL GH + I + F + S S D TI++W + + L GH+ V+ F
Sbjct: 230 SLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVF 289
Query: 172 HPTDDIVVSASLDQTIRVWD-ISGLRKKNV-APGM 204
P ++ S S D TI++WD +G+ K ++ PG+
Sbjct: 290 SPDSQLLESGSGDNTIKLWDPATGILKHSMRTPGI 324
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
+D I++W+ C+ T GH+ + F H Y + +S S D+T R+W S +
Sbjct: 470 EDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGY-YFVSCSYDKTARLWATDSNQALR 528
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
V GH V C QFHP + V + S D+T+R+WD
Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD 562
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++W + + +GHL + FH ++ + S D+T+R+W + + ++
Sbjct: 513 DKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLM 572
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH V F + S S+D I +WD+S
Sbjct: 573 TGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLS 606
Score = 122 (48.0 bits), Expect = 0.00065, P = 0.00065
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++ + + + +L+GH + F E +LS S+D TIR+W + +C+
Sbjct: 429 DINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY 488
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GH + V +F P VS S D+T R+W
Sbjct: 489 RGHVYPVWDVRFAPHGYYFVSCSYDKTARLW 519
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ TL GH+ +R + + ++ SA DD+ ++ W + I
Sbjct: 191 DRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH H V C HPT D+V++ D RVWDI
Sbjct: 251 HGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/187 (25%), Positives = 79/187 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGG 70
V+ ++F P W + + I++WD L H G VRG+ N+ +F +G
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 71 KMIVMAY---QGCILESRNEP-----CLF---RIKSVL--GDDYKIKVWNYKQRKCIFTL 117
V + Q ++ S + CL + VL G D +VW+ + + IF +
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIF-V 291
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
L H + + P +++ S D TI+ W + + +T H V HP ++
Sbjct: 292 LPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKEND 351
Query: 178 VVSASLD 184
VSAS D
Sbjct: 352 FVSASAD 358
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
GDD ++K W+ +Q K I + GHL + H +L+ D R+W +++ I
Sbjct: 231 GDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIF 290
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216
VL H+ V PTD V++ S D TI+ WD+ + K V +M + HP
Sbjct: 291 VLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAM-ALHP 347
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/96 (40%), Positives = 49/96 (51%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D +++VWN + I+ L GH +R + I S S D T+RIW ++ C
Sbjct: 309 GCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRS 367
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
VL GH V C H DIVVS S D T RVW IS
Sbjct: 368 VLVGHQASVRCLAVH--GDIVVSGSYDTTARVWSIS 401
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/203 (24%), Positives = 86/203 (42%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGN 232
Query: 65 IFVSG-------------GKMIVMAYQGCI-LESR--NEPCLFRIKSVLGDDYKIKVWNY 108
++G G+ + C + S N C + + D K+W+
Sbjct: 233 RIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSM--DKTCKLWDA 290
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
KC+ TL GH D I + F + I +AS D T RI+ +R C+ L GH +
Sbjct: 291 VNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISK 350
Query: 169 AQFHPTDDIVVSASLDQTIRVWD 191
F+P + +++ S D+T R+WD
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWD 373
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++++ R+C+ L GH I F+ + +L+ S D+T RIW Q+ C+ VL
Sbjct: 324 DGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 383
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GH + F+ DI+++ S D T R+W
Sbjct: 384 EGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICV 158
D K+W+ + + TL GH + + F++ Y I + S D+T ++W ++ C
Sbjct: 113 DRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHT 172
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 194
GH ++C F+P +V + S+D T ++WDI SG
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Score = 136 (52.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D K+W+ + KC T GH I F+ + + + S D T ++W QS + L
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTL 215
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197
TGH+ ++ F+ + + +++ S D T+ VW+ RK
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK 253
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 66/226 (29%), Positives = 98/226 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+T+ +S KG L + + I+S L + I++WD + + H G V +C
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LC 267
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---G-CI--LESRNEPCL---FR--IKSVLGDDYKIKVW 106
+ +SG V + G CI L E L F I D I VW
Sbjct: 268 LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVW 327
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ + I L+GH + F Y I+SAS D+TI++W + + L GH
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDRTIKVWSMDTLEFVRTLAGHR 385
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLV 208
+ C Q+ +VVS S D TIR+WDI SG+ + V G +LV
Sbjct: 386 RGIACLQYRGR--LVVSGSSDNTIRLWDIHSGVCLR-VLEGHEELV 428
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/100 (36%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W S
Sbjct: 358 IVSASGDR-TIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWDIHS 414
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 415 GVCLRVLEGHEELVRCIRFD--EKRIVSGAYDGKIKVWDL 452
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 66/226 (29%), Positives = 98/226 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
+T+ +S KG L + + I+S L + I++WD + + H G V +C
Sbjct: 212 MTRINCQSENSKGVYCLQYDDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LC 267
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---G-CI--LESRNEPCL---FR--IKSVLGDDYKIKVW 106
+ +SG V + G CI L E L F I D I VW
Sbjct: 268 LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVW 327
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ + I L+GH + F Y I+SAS D+TI++W + + L GH
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVDFDDRY--IVSASGDRTIKVWSMDTLEFVRTLAGHR 385
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLV 208
+ C Q+ +VVS S D TIR+WDI SG+ + V G +LV
Sbjct: 386 RGIACLQYRGR--LVVSGSSDNTIRLWDIHSGVCLR-VLEGHEELV 428
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/100 (36%), Positives = 50/100 (50%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D TIR+W S
Sbjct: 358 IVSASGDR-TIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWDIHS 414
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F + +VS + D I+VWD+
Sbjct: 415 GVCLRVLEGHEELVRCIRFD--EKRIVSGAYDGKIKVWDL 452
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G + R+ P LF G+D +K W+ + K I GHL + T H
Sbjct: 185 ISTVRGLAVSPRH-PYLFSC----GEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRL 239
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+++ D R+W ++R+ I VL+GH V Q D V++ SLD T+R+WD++
Sbjct: 240 DLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLA 299
Query: 194 GLRKKNVAPGMGKLVLSMKSKHP 216
+ V K + S+ + HP
Sbjct: 300 AGKTMGVLTHHKKGIRSLAT-HP 321
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/197 (23%), Positives = 76/197 (38%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ L+ P W S + I++W+ L H VRG+ + P S G
Sbjct: 146 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGE 205
Query: 71 -KMI----------VMAYQGCILESRNEPCLFRIKSVL--GDDYKIKVWNYKQRKCIFTL 117
KM+ + Y G + R+ ++ G D +VW+ + R I L
Sbjct: 206 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVL 265
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + P +++ S D T+R+W + + VLT H + HP +
Sbjct: 266 SGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFT 325
Query: 178 VVSASLDQTIRVWDISG 194
SAS +I+ W G
Sbjct: 326 FASASTG-SIKQWKCPG 341
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 160 (61.4 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----Q 78
+I+S + +++W +LL H VR C I V+G + +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVES 367
Query: 79 G---CILESRNEP--CL-FRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
G L + C+ F +V+ G D+ +K+WN +CI TL GH + + + F
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFE 427
Query: 131 HEYPWILSASDDQTIRIWYW---QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI 187
E + S S D +IR+W + + + C+ +L GH Q +I+VS + D +
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHV 485
Query: 188 RVWDI 192
RVWDI
Sbjct: 486 RVWDI 490
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 89 CLFRIKSVL--GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145
C+ S+L G D ++VW+ + + + TL GH +R F + ++S D T+
Sbjct: 343 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTV 400
Query: 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+IW + CI LTGHN+ V F IV S SLD +IRVWD +
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW + + ++TL+GH + T+ +I+S S D+T+++W + +
Sbjct: 274 DDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHT 333
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 194
L GH V C I+V+ S D T+RVWD+ SG
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM----AYQG 79
+++ + +++WD L H VR C VSGG + A+ G
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTG 408
Query: 80 -CI--LESRNE---PCLFRI-KSVL--GD-DYKIKVWNYKQ---RKCIFTLLGHLDYIRT 126
CI L N LF +S++ G D I+VW++ + ++C+ L GH T
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL--T 466
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
+ ++S + D +R+W C+ +L+GH + Q+ + +V ++S D T
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGT 525
Query: 187 IRVWDI 192
+++WDI
Sbjct: 526 VKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 160 (61.4 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAY----Q 78
+I+S + +++W +LL H VR C I V+G + +
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLRVWDVES 367
Query: 79 G---CILESRNEP--CL-FRIKSVL--GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
G L + C+ F +V+ G D+ +K+WN +CI TL GH + + + F
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFE 427
Query: 131 HEYPWILSASDDQTIRIWYW---QSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI 187
E + S S D +IR+W + + + C+ +L GH Q +I+VS + D +
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHV 485
Query: 188 RVWDI 192
RVWDI
Sbjct: 486 RVWDI 490
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 89 CLFRIKSVL--GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145
C+ S+L G D ++VW+ + + + TL GH +R F + ++S D T+
Sbjct: 343 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTV 400
Query: 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+IW + CI LTGHN+ V F IV S SLD +IRVWD +
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +KVW + + ++TL+GH + T+ +I+S S D+T+++W + +
Sbjct: 274 DDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHT 333
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 194
L GH V C I+V+ S D T+RVWD+ SG
Sbjct: 334 LQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESG 368
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 46/186 (24%), Positives = 83/186 (44%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM----AYQG 79
+++ + +++WD L H VR C VSGG + A+ G
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTG 408
Query: 80 -CI--LESRNE---PCLFRI-KSVL--GD-DYKIKVWNYKQ---RKCIFTLLGHLDYIRT 126
CI L N LF +S++ G D I+VW++ + ++C+ L GH T
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL--T 466
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
+ ++S + D +R+W C+ +L+GH + Q+ + +V ++S D T
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGT 525
Query: 187 IRVWDI 192
+++WDI
Sbjct: 526 VKLWDI 531
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + L P + ++ + + LW+++ + ++ H+ V + F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 65 IFVSGGK-----MIVMAYQGCILESRNEPCLFR---------IKSVLGDDYKIKVWNYKQ 110
+ S + + + +G E + R + +D IKVW+ +
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
++ +++L H ++R F + I+S S+D+TI+IW ++ C+ + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 171 FHPTDDIVVSASLDQTIRVWDI 192
F+P+ + SA DQT++VWD+
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDV 215
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 47/195 (24%), Positives = 83/195 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSG 69
V + F P + S+ + ++LW +F H PVR + F Q S
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 70 GKMIVM--AYQGCILES--RNEP---CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K I + Y+ L S R+ C F R+ +D IK+W+ ++C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+ + F+ I SA DQT+++W + + H+ V C FHP+ +
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 242
Query: 178 VVSASLDQTIRVWDI 192
+++AS D T+++ D+
Sbjct: 243 LITASSDGTLKILDL 257
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 157 (60.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 28/94 (29%), Positives = 54/94 (57%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D IKVW+ +++ +++L H ++R F + I+S S+D+TI+IW ++ C+
Sbjct: 80 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 139
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + F+P+ + SA DQT++VWD+
Sbjct: 140 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV 173
Score = 146 (56.5 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 27/92 (29%), Positives = 51/92 (55%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W +R H +R+ F + ++ +AS+D++I++W + + L
Sbjct: 39 DRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSL 98
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H H+V CA+F P ++VS S D+TI++WD
Sbjct: 99 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 130
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 159 (61.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 89 CLFRIKSVLGD---DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI 145
CL ++++L D I++WN + + L GH + T + ++S S D+TI
Sbjct: 278 CLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV--TCLQFDQCKLISGSMDKTI 335
Query: 146 RIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
RIW +++ CI +L GH V+C F T ++VS S D T+++W SG
Sbjct: 336 RIWNYRTSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSG 382
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 66/264 (25%), Positives = 112/264 (42%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG--KMI-VMAYQG- 79
+ S ++ I+LW+ + + H V C Q +SG K I + Y+
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVT--CLQFDQCKLISGSMDKTIRIWNYRTS 343
Query: 80 -CI--LESRNEP--CLFRIKSVL--GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
CI L + CL ++L G D +K+W++ K I TL GH + +
Sbjct: 344 ECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIR 402
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ +LS SDD TI+IW ++ C+ + H V D + S SLD TI+ WD
Sbjct: 403 DRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL--ADSRLFSCSLDGTIKQWD 460
Query: 192 ISGLRKKNVAPGMGKL--VLSMKSKHP---IWKYCKPVKYCNPKHTLHICNRKMEPLCNI 246
I +KK V G + V + + H + VK +H EP+ ++
Sbjct: 461 IE--KKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSV 518
Query: 247 H-ENTRVKSGAWDESGVFIYTTSN 269
+ V SG+ ++ ++++ +N
Sbjct: 519 ALGDCEVVSGS-EDGKIYLWLFNN 541
>TAIR|locus:2181733 [details] [associations]
symbol:AT5G02430 "AT5G02430" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AL162971 HOGENOM:HOG000239143
ProtClustDB:CLSN2683085 IPI:IPI00534660 PIR:T48264
RefSeq:NP_195863.1 UniGene:At.54687 ProteinModelPortal:Q9LZ59
SMR:Q9LZ59 PaxDb:Q9LZ59 PRIDE:Q9LZ59 EnsemblPlants:AT5G02430.1
GeneID:831780 KEGG:ath:AT5G02430 TAIR:At5g02430 InParanoid:Q9LZ59
OMA:RRENANS PhylomeDB:Q9LZ59 Genevestigator:Q9LZ59 Uniprot:Q9LZ59
Length = 905
Score = 161 (61.7 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFH 172
C FT GHLD + + +LS+S D+T+R+W ++++C+ L HN YV C QF+
Sbjct: 513 CSFT--GHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWDIETQSCL-KLFAHNDYVTCVQFN 568
Query: 173 PTD-DIVVSASLDQTIRVWDIS 193
P D D +S SLD IR+W+IS
Sbjct: 569 PLDEDYFISGSLDAKIRIWNIS 590
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 159 (61.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 68/277 (24%), Positives = 123/277 (44%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWD---YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG-- 69
+S+ P+ +++ +G LW+ + T+L+ H+ VR I + + + VSG
Sbjct: 131 VSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQA---HDSAVRSIIWSHNEDWMVSGDD 187
Query: 70 -GKM-----------IVMAYQGCILESRN-EPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
G + I A++ + + P ++ S DD IK+W++ +
Sbjct: 188 SGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASC-ADDKIIKIWDFARCTEDNQ 246
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L+GH ++ +H + I+S D I+IW +S I L GH V +++ +
Sbjct: 247 LVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGN 306
Query: 177 IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKH--TLH 234
+VSAS DQ ++V+DI +++ G GK V ++ + HP Y + + K L+
Sbjct: 307 WIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTAL-ALHP---YHEDLFVSGDKDGKILY 362
Query: 235 ICNRKMEPLCNIHE--NTRVKSGAWDESGVFIYTTSN 269
EP IH + V S +W G + + SN
Sbjct: 363 WIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSN 399
Score = 151 (58.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/204 (25%), Positives = 90/204 (44%)
Query: 3 TKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHE-GPVRGICFHN 61
T + + V+ + + W++S +G I+ W MN + + F HE +RG+ F
Sbjct: 161 TILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSP 219
Query: 62 QQPIFVS--GGKMI-VMAYQGCILESR------NEPCL--FRIKSVL---GDDYKIKVWN 107
S K+I + + C +++ + C+ KS++ G D IK+W+
Sbjct: 220 TDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWD 279
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
K + I TL GH + ++ WI+SAS DQ ++++ ++ + GH V
Sbjct: 280 AKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVT 339
Query: 168 CAQFHPT-DDIVVSASLDQTIRVW 190
HP +D+ VS D I W
Sbjct: 340 ALALHPYHEDLFVSGDKDGKILYW 363
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 51/201 (25%), Positives = 85/201 (42%)
Query: 8 KSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFV 67
+ ++++GLSF P + S + +I++WD+ T + H V+ + +H Q+ + V
Sbjct: 208 EQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLG---------------DDYKIKVWNYKQRK 112
SGGK + S+N L KS + D +KV++ + K
Sbjct: 268 SGGKDNNIKIWDA-KSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMK 326
Query: 113 CIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC---ICVLTGHNHYVMCA 169
+ T GH + T H Y L S D+ +I YW N + + H+ V
Sbjct: 327 EMQTFKGHGKEV-TALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSL 385
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
+HP I+ S S D T + W
Sbjct: 386 SWHPIGHILASGSNDHTTKFW 406
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 60/211 (28%), Positives = 94/211 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 252 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 305
Query: 57 ICFHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIK 104
+C + + ++G V + G +L + C + ++ G D I
Sbjct: 306 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA 365
Query: 105 VWNYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
VW+ I L+GH + F +Y I+SAS D+TI++W + + L G
Sbjct: 366 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNG 423
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H + C Q+ D +VVS S D TIR+WDI
Sbjct: 424 HKRGIACLQYR--DRLVVSGSSDNTIRLWDI 452
Score = 140 (54.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 398 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 454
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD ++ L + AP G L L
Sbjct: 455 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPR--APA-GTLCLRT 509
Query: 212 KSKH 215
+H
Sbjct: 510 LVEH 513
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 330
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 157 (60.3 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
GDD ++K W+ +Q K I + GHL + H +L+ D R+W +++ I
Sbjct: 237 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIF 296
Query: 158 VLTGHNHYVMCAQF-HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHP 216
L+GH++ V C+ F PTD VV+ S D TI+ WD+ + + K V +M + HP
Sbjct: 297 ALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM-TLHP 354
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 49/189 (25%), Positives = 79/189 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP-IFVSGG 70
V+ ++F P W + + I++WD L H VRG+ N+ +F +G
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 71 KMIVMAY---QGCILESRNEP-----CL--FRIKSVL---GDDYKIKVWNYKQRKCIFTL 117
V + Q ++ S + CL VL G D +VW+ + + IF L
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + + + F P +++ S D TI+ W + + LT H V HP ++
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 178 VVSASLDQT 186
SAS D T
Sbjct: 359 FASASADNT 367
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ TL GH++ +R + + ++ SA DD+ ++ W + I
Sbjct: 197 DRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C HPT D++++ D RVWDI
Sbjct: 257 HGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 154 (59.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 11 RVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
+V G++F P I+S S + I++W+ L++ ++ GP + F F++G
Sbjct: 146 KVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITG 205
Query: 70 --GK-MIVMAYQGCILE----SRNEPCLFRIKSVLGDDYK--------IKVWNYKQRKCI 114
G+ + + E S +P +V D K +K WN K +
Sbjct: 206 AIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRNFVKAWNLADAKEL 265
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
F++ G I T W+ +A+ + TI I+ + + L GH +V+ F P
Sbjct: 266 FSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPD 325
Query: 175 DDIVVSASLDQTIRVWDISGLRK 197
+ + S + D+T+++WD+S L +
Sbjct: 326 GNTLYSGAEDKTVKIWDLSALAR 348
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 60/211 (28%), Positives = 94/211 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 346
Query: 57 ICFHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIK 104
+C + + ++G V + G +L + C + ++ G D I
Sbjct: 347 LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA 406
Query: 105 VWNYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
VW+ I L+GH + F +Y I+SAS D+TI++W + + L G
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H + C Q+ D +VVS S D TIR+WDI
Sbjct: 465 HKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 439 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 495
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD ++ L + AP G L L
Sbjct: 496 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPR--APA-GTLCLRT 550
Query: 212 KSKH 215
+H
Sbjct: 551 LVEH 554
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTC 399
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 158 (60.7 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 60/211 (28%), Positives = 94/211 (44%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK--FDEHEGPVRG 56
L + +S KG L + ++ I+S L + I++WD NTL K H G V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWD--KNTLECKRILTGHTGSV-- 346
Query: 57 ICFHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIK 104
+C + + ++G V + G +L + C + ++ G D I
Sbjct: 347 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA 406
Query: 105 VWNYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
VW+ I L+GH + F +Y I+SAS D+TI++W + + L G
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNG 464
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H + C Q+ D +VVS S D TIR+WDI
Sbjct: 465 HKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 439 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 495
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD ++ L + AP G L L
Sbjct: 496 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPR--APA-GTLCLRT 550
Query: 212 KSKH 215
+H
Sbjct: 551 LVEH 554
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 371
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 136 (52.9 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 30/105 (28%), Positives = 54/105 (51%)
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+++V++ C + L GH + + T I++ S D+T+R+W S++CI V
Sbjct: 382 EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV 441
Query: 159 LTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRKKNVAP 202
TGHN ++ F VS S D+T++VW + G+ + + P
Sbjct: 442 GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEP 486
Score = 113 (44.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW--ILSASDDQTIRIWYWQSRN- 154
G D K+ VW+ C GH + + FH + ++S SDD T+R+W ++N
Sbjct: 121 GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT 180
Query: 155 ---CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ ++ H V + SA D+ + +WD+
Sbjct: 181 EKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDL 221
Score = 104 (41.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGD-DYKIKVWNYKQRKCIFTLLGHL-DYI 124
++G K +V++ C+ S N + V G D +++WN + CI GH D +
Sbjct: 397 LAGHKEVVLSLDTCVSSSGN------VLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDIL 450
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQ-----SRNCI-----CVLTGHNHYVMCAQFHPT 174
F + + +S S D+T+++W S I V+ H+ +
Sbjct: 451 AVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARN 510
Query: 175 DDIVVSASLDQTIRVWDISGL 195
D +V + S D+T +W + L
Sbjct: 511 DSLVCTGSEDRTASIWRLPDL 531
Score = 80 (33.2 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E +S + L+ P + S+ H+ I++WD + + HEGPV G+ H +
Sbjct: 57 EGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGL 116
Query: 66 FVSGG---KMIVMAYQG 79
+ G K++V G
Sbjct: 117 LATAGADRKVLVWDVDG 133
Score = 53 (23.7 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSG 69
V G++ H + ++ + + +WD F H+G V I FH + + I +SG
Sbjct: 105 VMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISG 164
Score = 37 (18.1 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 481 GIKENSHPATNIKLEQLIA 499
GI E+S N+K ++A
Sbjct: 478 GISEDSEEPINLKTRSVVA 496
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 153 (58.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR--NCIC 157
D+ IK WN +C+ TL+GH DY++ E +LS S D ++ +W S+ +
Sbjct: 111 DHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLY 170
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
LTGH+ + C P DI + + +IR W I+
Sbjct: 171 KLTGHSRGIECITRQPNTDIFWTCGSESSIRCWHIT 206
Score = 44 (20.5 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 21 RPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV 54
R ++ + H + +L+D +N + + H GPV
Sbjct: 57 RLFVCEASH--ICKLYDLEINKTCKTYKGHSGPV 88
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 155 (59.6 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 51/203 (25%), Positives = 87/203 (42%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F +A + LSF+P+ + + + +LWD + + H + + F
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGD 232
Query: 65 IFVSGG--KMIVM--AYQGCILESRNEPCLFRIKSVL----------GD-DYKIKVWNYK 109
++G +V+ A G + + C I S L G D +W+
Sbjct: 233 RIITGSFDHTVVVWDASTGRKVHTLIGHCA-EISSALFSWDCSLILTGSMDKTCMLWDAT 291
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
KC+ TL GH D I + F + I +AS D T R++ +R CI L GH +
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKI 351
Query: 170 QFHPTDDIVVSASLDQTIRVWDI 192
F+P + +++ S D+T R+WD+
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDV 374
Score = 147 (56.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +V+N RKCI L GH I F+ + +L+ S D+T RIW Q+ C+ VL
Sbjct: 324 DGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVL 383
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GH + F+ +IV++ S D + R+W
Sbjct: 384 EGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 146 (56.5 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICV 158
D KVW+ + + TL GH + + F++ Y I + S D+T ++W ++ C
Sbjct: 113 DRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHT 172
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SG 194
GH ++C F+P +V + S+D T ++WDI SG
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D K+W+ + KC T GH I F+ + + + S D T ++W QS + L
Sbjct: 156 DKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL 215
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
TGH ++ F + D +++ S D T+ VWD S RK + G
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIG 259
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 156 (60.0 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D IKVWN +++ +++L H ++R F + I+S S+D+TI+IW ++ C+
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + F+P + SA D T+++WDI
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDI 215
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 46/190 (24%), Positives = 90/190 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W +R H +R+ F + ++ +AS+D++I++W + + L
Sbjct: 81 DRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSL 140
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIW 218
H H+V CA+F P ++VS S D+TI++WD + + N + +G + +P
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG--FANFVDFNPNG 198
Query: 219 KYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278
C + HT+ I + ++ L ++ +V SG + V + + N+I I
Sbjct: 199 T-C--IASAGSDHTVKIWDIRVNKLL---QHYQVHSGG--VNCVSFHPSGNYI---ITAS 247
Query: 279 DHGIIRTLDL 288
G ++ LDL
Sbjct: 248 SDGTLKILDL 257
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-YWQSRNCI 156
G D +KVW K I+T GHL I T + + I S SDD+TIR+W +
Sbjct: 195 GADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHP 254
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
GH++YV F P +++VS S D+ + +WD+ R P
Sbjct: 255 TPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLP 300
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 156 (60.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 53/197 (26%), Positives = 82/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 303 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 362
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 363 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 422
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH V +F
Sbjct: 423 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 482
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 483 GEILASGSMDNTVRLWD 499
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 323 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 382
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + V + S D+T+R+WD+
Sbjct: 383 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH ++ + S D+T+R+W + NC+
Sbjct: 364 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 423
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 424 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 462
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 281 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 340
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 372
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 161 (61.7 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 50/207 (24%), Positives = 86/207 (41%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L FE + ++F P + S+ + I++WD L + D H VR + F
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFS 885
Query: 61 NQQPIFVSGG-KMIVMAYQGCI--LESRNEPCLFRIKSV-LGDDYK----------IKVW 106
+ S + + L+ E +KSV D K +K+W
Sbjct: 886 PDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLW 945
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166
N + + TL GH +R+ F + + S+S D TI++W + GH+ ++
Sbjct: 946 NPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWI 1005
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWDIS 193
F P +VS S D TI++WD++
Sbjct: 1006 RAVAFSPDGKHLVSGSDDNTIKLWDLA 1032
Score = 157 (60.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 53/201 (26%), Positives = 87/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
++ S V+ ++F P + SS + I++W+ L + + G V+ + F
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 66 FVSGG-KMIVMAYQ---GCILESRNEPCLFRIKSVL-----------GDDYKIKVWNYKQ 110
SG K V + G +L++ E ++SV D IK+WN
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTL-EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTT 991
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
+ T GH +IR F + ++S SDD TI++W + L H+ V
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 171 FHPTDDIVVSASLDQTIRVWD 191
F P D + S+SLD TI++WD
Sbjct: 1052 FSPDDKQLASSSLDSTIKLWD 1072
Score = 152 (58.6 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 50/204 (24%), Positives = 85/204 (41%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S V ++F P + SS + I+LWD L + H VR + F +
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKL 1100
Query: 66 FVSGGKMIVMAYQGCILESRNEPCLFR---IKSV--------LGDDY---KIKVWNYKQR 111
S + + + R + SV L Y IK+W+
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG 1160
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
+ + TL GH D I++ F + + S S DQT ++W + + + GH+ +V F
Sbjct: 1161 ELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAF 1220
Query: 172 HPTDDIVVSASLDQTIRVWD-ISG 194
P ++ S+S +TI++WD ++G
Sbjct: 1221 SPDGKLLASSSYGETIKLWDPVTG 1244
Score = 144 (55.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 48/214 (22%), Positives = 89/214 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSGG 70
++ ++F P ++S + I+LWD + L + ++H V + F + + + S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 71 KMIVMAYQGCI--LESRNEPCLFRIKSV-LGDDYK----------IKVWNYKQRKCIFTL 117
+ + L+ E ++SV D K IK+WN + TL
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
G D++ + F + + S D TI++W + + L GH+ + F P +
Sbjct: 1125 TGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL 1184
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
+ S S DQT ++WD + + G K V S+
Sbjct: 1185 LASGSYDQTAKLWDPATGELLQIFEGHSKWVESV 1218
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 45/194 (23%), Positives = 84/194 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + F P ++S ++ +++WD LL+ D H G V + F + SG
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY 812
Query: 71 -KMIVM--AYQGCILES-RNEP-CLFRI------KSVLG--DDYKIKVWNYKQRKCIFTL 117
I + + G +L++ P ++ + K + DD IK+W+ + TL
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTL 872
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
H +R+ F + + S+S D TI++W + L G + +V F P
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 178 VVSASLDQTIRVWD 191
+ S S T+++W+
Sbjct: 933 LASGSEKNTVKLWN 946
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 47/205 (22%), Positives = 88/205 (42%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF- 59
+L + S V+ L+F P + S ++ I LWD LL+ F+ H + + F
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 60 -HNQQPIFVSGGKMIVM--AYQGCI---LESRNEPC---LF----RIKSVLGDDYKIKVW 106
++ S I + G + L+S ++ F ++ + D IKVW
Sbjct: 844 PDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166
N + +L G ++++ F + + S S+ T+++W + + L GH+ V
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSV 963
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWD 191
F P + S+S D TI++W+
Sbjct: 964 RSVAFSPDGKQLASSSSDTTIKLWN 988
Score = 127 (49.8 bits), Expect = 0.00042, P = 0.00042
Identities = 50/174 (28%), Positives = 72/174 (41%)
Query: 32 VIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-KMIVMAYQ---GCILESRN- 86
V Q W TL + H GPV + F VSG V + G +L++ +
Sbjct: 735 VEQTWSAEQQTL----ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 87 -----EPCLFRIKSVL---GD-DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL 137
E F L G D I +W+ + + T GH I + F + +
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 138 SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
SASDD TI+IW + L H+ V F P ++ S+SLD TI+VW+
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Score = 124 (48.7 bits), Expect = 0.00088, P = 0.00088
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +K+W+ + + TL GH + + F + + S S D TI +W + +
Sbjct: 771 DDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTF 830
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
GH H + F P + SAS D TI++WD++
Sbjct: 831 EGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 155 (59.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 28/94 (29%), Positives = 52/94 (55%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D IKVWN +++ +++L H ++R F + I+S S+D+TI+IW ++ C+
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + F+P + SA D T+++WDI
Sbjct: 182 FSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI 215
Score = 149 (57.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 48/190 (25%), Positives = 90/190 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++W +R H +R+ F + ++ SAS+D++I++W + + L
Sbjct: 81 DRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSL 140
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR-KKNVAPGMGKLVLSMKSKHPIW 218
H H+V CA+F P ++VS S D+TI++WD + + N + +G + + +P
Sbjct: 141 YRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG--FANFVAFNPNG 198
Query: 219 KYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNG 278
C + HT+ I + ++ L ++ +V SG + V + + N Y I
Sbjct: 199 T-C--IASAGSDHTVKIWDIRVNKLL---QHYQVHSGG--VNCVSFHPSGN---YLITAS 247
Query: 279 DHGIIRTLDL 288
G ++ LDL
Sbjct: 248 SDGTLKILDL 257
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/210 (26%), Positives = 91/210 (43%)
Query: 1 MLTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
ML + +S KG L + + I+S L + I++WD ++ H G V +
Sbjct: 199 MLRRINCRSENSKGVYCLQYDDGK--IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--L 254
Query: 58 CFHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKV 105
C + +SG V + G ++ + C + ++ G D I V
Sbjct: 255 CLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 314
Query: 106 WNYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
W+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 315 WDMTSPSEITLRRVLVGHRAAVNVVDFDEKY--IVSASGDRTIKVWSTSTCEFVRTLNGH 372
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D +IR+WDI
Sbjct: 373 KRGIACLQYR--DRLVVSGSSDNSIRLWDI 400
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVW+ + + TL GH I + ++S S D +IR+W +
Sbjct: 346 IVSASGDR-TIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNSIRLWDIEC 402
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
C+ VL GH V C +F +VS + D I+VWD+
Sbjct: 403 GACLRVLEGHEELVRCIRFDTKR--IVSGAYDGKIKVWDL 440
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW C+ L GH V+C Q+ D +++S S D T+RVWD++
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYD--DKVIISGSSDSTVRVWDVN 278
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/116 (30%), Positives = 55/116 (47%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D IK+W+ K TL GH++ IR + P++ S +D ++ W + I
Sbjct: 306 NDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRD 365
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214
GH V C HP+ D+++S D +RVWDI V G V+S+ S+
Sbjct: 366 YHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
S+ P LF G+D ++K W+ + K I GHL + H ++S D
Sbjct: 337 SKKNPYLFSC----GEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDA 392
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+R+W ++++ + VL+GH VM + VVS S D+ IR+WD++ + +
Sbjct: 393 VVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTH 452
Query: 204 MGKLVLSMKSKHPI-WKYC 221
K + S+ S HP + +C
Sbjct: 453 HKKSIRSL-SIHPFEYSFC 470
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/182 (23%), Positives = 71/182 (39%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-----KMIVMAY 77
W + ++ +I++WD L H +R I + P S G K + Y
Sbjct: 300 WFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEY 359
Query: 78 QGCILESRNEP----CLFRIKSV-L----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
I + CL S+ L G D ++VW+ + + +F L GH + +
Sbjct: 360 NKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSIC 419
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
P ++S S D+ IR+W + C LT H + HP + S D ++
Sbjct: 420 SQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDN-VK 478
Query: 189 VW 190
VW
Sbjct: 479 VW 480
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/116 (30%), Positives = 55/116 (47%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D IK+W+ K TL GH++ IR + P++ S +D ++ W + I
Sbjct: 306 NDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRD 365
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214
GH V C HP+ D+++S D +RVWDI V G V+S+ S+
Sbjct: 366 YHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 84 SRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
S+ P LF G+D ++K W+ + K I GHL + H ++S D
Sbjct: 337 SKKNPYLFSC----GEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDA 392
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+R+W ++++ + VL+GH VM + VVS S D+ IR+WD++ + +
Sbjct: 393 VVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTH 452
Query: 204 MGKLVLSMKSKHPI-WKYC 221
K + S+ S HP + +C
Sbjct: 453 HKKSIRSL-SIHPFEYSFC 470
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 43/182 (23%), Positives = 71/182 (39%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG-----KMIVMAY 77
W + ++ +I++WD L H +R I + P S G K + Y
Sbjct: 300 WFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEY 359
Query: 78 QGCILESRNEP----CLFRIKSV-L----GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
I + CL S+ L G D ++VW+ + + +F L GH + +
Sbjct: 360 NKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSIC 419
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
P ++S S D+ IR+W + C LT H + HP + S D ++
Sbjct: 420 SQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDN-VK 478
Query: 189 VW 190
VW
Sbjct: 479 VW 480
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 155 (59.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 44/204 (21%), Positives = 88/204 (43%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + F P I ++ + + LW + + ++ H+ V + F Q
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 65 IFVSGGKMIVMAYQGCILESRNEPCLFR-----IKSV-----------LGDDYKIKVWNY 108
+ S + + +L+ + + F+ ++SV +D IKVW+
Sbjct: 74 LLASASRDKTVRLW--VLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
+++ +++L H ++R F + I+S S+D+TI+IW S+ C+ + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF 191
Query: 169 AQFHPTDDIVVSASLDQTIRVWDI 192
F P + SA D +R+WDI
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDI 215
Score = 138 (53.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 49/195 (25%), Positives = 82/195 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSG 69
V L F P+ + S+ + ++LW +F H PVR + F Q + S
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 70 GKMIVM--AYQGCILES--RNEP---CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K I + Y+ L S R+ C F R+ +D IK+W+ ++C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+ + F I SA D +RIW + + H+ V C FHP+ +
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS 242
Query: 178 VVSASLDQTIRVWDI 192
+V+AS D T+++ D+
Sbjct: 243 LVTASSDGTVKILDL 257
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/96 (29%), Positives = 38/96 (39%)
Query: 261 GVFIYTTSNHIK--YAIVNGDHGIIRT---LDLPIYITKIKGNQVYYLDR---------- 305
G IYT H + + G + T D + + + NQV+Y D
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLHL 319
Query: 306 ECSPHVLRIDPT-----EFKFKLALINHKYEEV-LH 335
E SPH+L I P E K + IN K E + LH
Sbjct: 320 EASPHLLDIYPRTPHGHEDKRETIEINPKLEVMDLH 355
Score = 40 (19.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 574 DLPIYITKIKGNQVYYLDR----------ECSPHVLRIDPT-----EFKFKLALINHKYE 618
D + + + NQV+Y D E SPH+L I P E K + IN K E
Sbjct: 291 DAQVLVWRTSFNQVHYRDPSKRNLKRLHLEASPHLLDIYPRTPHGHEDKRETIEINPKLE 350
Query: 619 EV-LH 622
+ LH
Sbjct: 351 VMDLH 355
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 135 (52.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D KIK+W + CI H + + F + +LS S DQT RI +S +
Sbjct: 284 DGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEF 343
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG---LRKKNVAPGMGKLVLSMKSKHP 216
GH YV A F +++AS D T++VWD L+ P + S+ S H
Sbjct: 344 RGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHL 403
Query: 217 IWKYCKPVKYCNPKHTLHI 235
K + + CN +++I
Sbjct: 404 FPKNTEHIVVCNKTSSIYI 422
Score = 66 (28.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/76 (30%), Positives = 32/76 (42%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLL--------EKFDEHEGPVR 55
KF KS + F P ++ SS +G I++WDY L E F H+ PV
Sbjct: 209 KFGKKS-HAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVL 267
Query: 56 GICFHNQQPIFVSGGK 71
I F + SG +
Sbjct: 268 CIDFSRDSEMLASGSQ 283
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + D+ I++W+ + KC+ L GH + T F + + S D+ +W Q
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
S + +L GH + + F PT D + + S D T+ +WD+
Sbjct: 141 SGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD + VW K + ++ L GH +++ F + I S+S D +IR+W C+ V
Sbjct: 46 DDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHV 105
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
L GH V F P + S D+ VW++ R+ ++ G
Sbjct: 106 LKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVG 150
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 249
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 250 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 309
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 367
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 368 RGIACLQYR--DRLVVSGSSDNTIRLWDI 394
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/124 (35%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 340 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 396
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD I+ L + AP G L L
Sbjct: 397 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLIAALDPR--APA-GTLCLRT 451
Query: 212 KSKH 215
+H
Sbjct: 452 LVEH 455
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 272
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 249
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 250 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 309
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 367
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 368 RGIACLQYR--DRLVVSGSSDNTIRLWDI 394
Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 340 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 396
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
C+ VL GH V C +F + +VS + D I+VWD+ AP G L L
Sbjct: 397 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLMAALDPR-APA-GTLCLRTL 452
Query: 213 SKH 215
+H
Sbjct: 453 VEH 455
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 274
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNGMMVTC 300
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 137 (53.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPG 326
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 49 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPNGSTLASA-GFDRLILLWNVYGD 99
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDI---RKK 185
Score = 58 (25.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGG 213
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 271
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 48 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPNGSTLASA-GFDRLILLWNVYGD 98
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 99 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 158
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 159 PARRGPQLVCTGSDDGTVKLWDI---RKK 184
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGG 212
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 138 (53.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+RIW +
Sbjct: 239 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKE 298
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
C+ + G HN + + C+ + P + S D+ + VWD + R PG V
Sbjct: 299 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSV 357
Query: 209 --LSMKSKHPI 217
L+ + PI
Sbjct: 358 NELAFHPEEPI 368
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 75 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPWGNTLASA-GFDRLILLWNVYGD 125
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 126 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 185
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 186 PARRGPQLVCTGSDDGTVKLWDI---RKK 211
Score = 58 (25.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 183 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGG 239
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 49 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPNGSTLASA-GFDRLILLWNVYGD 99
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDI---RKK 185
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGG 213
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 273 RCVRIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 49 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPNGSTLASA-GFDRLILLWNVYGD 99
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDI---RKK 185
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGG 213
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 136 (52.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 326
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 42/149 (28%), Positives = 67/149 (44%)
Query: 52 GPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN-YKQ 110
GP R C Q PI M++ ++G + + P + S G D I +WN Y
Sbjct: 49 GPPR--CSSLQAPI------MLLSGHEGEVYCCKFHPNGSTLASA-GFDRLILLWNVYGD 99
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCA 169
TL GH + ++ + + SAS D+T+ +W ++ + L GH +V C
Sbjct: 100 CDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCY 159
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKK 198
+V + S D T+++WDI RKK
Sbjct: 160 PARRGPQLVCTGSDDGTVKLWDI---RKK 185
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 157 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGG 213
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 155 (59.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +IK+W+ +K + GH I + F H +I+S S D+T R+W ++ CI
Sbjct: 380 EDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILK 439
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
L N A P D + SLDQ IRVW +SG
Sbjct: 440 LEIENGVTAIA-ISPNDQFIAVGSLDQIIRVWSVSG 474
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 50/206 (24%), Positives = 85/206 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG-G 70
V+ ++F P ++++ + I+LWD + F HE + + F + VSG G
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 71 KMIVMAYQ---G-CIL--ESRNEPCLFRIKS-----VLGD-DYKIKVWNYKQRKCIFTLL 118
+ G CIL E N I +G D I+VW+ + L
Sbjct: 423 DRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-LVERLE 481
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN------------CICVLTGHNHYV 166
GH + + + F + +LS S D+TI++W Q+ C TGH +V
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFV 541
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWDI 192
+ P +S S D++++ WD+
Sbjct: 542 LSVAVSPDSRWGLSGSKDRSMQFWDL 567
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/197 (26%), Positives = 82/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 541 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 600
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 601 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 660
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH V +F
Sbjct: 661 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 720
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 721 GEILASGSMDNTVRLWD 737
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 561 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 620
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + V + S D+T+R+WD+
Sbjct: 621 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 654
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH ++ + S D+T+R+W + NC+
Sbjct: 602 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 661
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 662 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 700
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 578
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 610
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/197 (26%), Positives = 82/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH V +F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 723 GEILASGSMDNTVRLWD 739
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 563 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 622
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + V + S D+T+R+WD+
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH ++ + S D+T+R+W + NC+
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 612
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/197 (26%), Positives = 82/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 543 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 602
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 603 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 662
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH V +F
Sbjct: 663 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 722
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 723 GEILASGSMDNTVRLWD 739
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 563 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 622
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + V + S D+T+R+WD+
Sbjct: 623 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH ++ + S D+T+R+W + NC+
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 612
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/197 (26%), Positives = 82/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCV 663
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH V +F
Sbjct: 664 RIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRD 723
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 724 GEILASGSMDNTVRLWD 740
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 564 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 623
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + V + S D+T+R+WD+
Sbjct: 624 FAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH ++ + S D+T+R+W + NC+
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 613
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 257 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 312
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 313 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 372
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 373 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 430
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 431 RGIACLQYR--DRLVVSGSSDNTIRLWDI 457
Score = 140 (54.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 403 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 459
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD ++ L + AP G L L
Sbjct: 460 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPR--APA-GTLCLRT 514
Query: 212 KSKH 215
+H
Sbjct: 515 LVEH 518
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 335
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D+ ++W++ + + GHL + FH ++ + S D+T+R+W Q N + +
Sbjct: 402 DHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF 461
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNV 200
TGH V C F P +VSA DQ +++WD+ SG K++
Sbjct: 462 TGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Score = 141 (54.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W+ +Q + GH +R F +++SA +DQ +++W S L
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 503
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMG 205
GH + F ++ SAS+D ++R+WDI K N P G
Sbjct: 504 HGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS--KHNSTPADG 547
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/278 (22%), Positives = 119/278 (42%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK---MIVMAYQGC 80
++S + + +WD +L K H G V + F ++ + VSG +I+ +Q
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 81 ----ILESRNEPCLFRIKS---VLGD--DYKIKVWNYKQRK----CIFTLLGHLDYIRTT 127
+ + L + S ++ D+ +VW C+ L GHL + +
Sbjct: 294 RPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 128 FFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTI 187
+ + I++AS D+T+R W + +CI ++ H + CAQ++ +VS S D TI
Sbjct: 354 QYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIVSGSSDLTI 411
Query: 188 RVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKM-EPLCNI 246
R+++ S + + G L+ +++ + + T+ I N E C +
Sbjct: 412 RIFEASSGKLLRMLQGHEDLIRTVRFND------EKIVSGGYDGTVRIWNFNTGEQHCVL 465
Query: 247 HE--NTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282
H N+RV +D + T S+ I + N D G+
Sbjct: 466 HNSRNSRVFGLQFDHRRIIACTHSSEI--LVWNFDDGL 501
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 164 (62.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W + +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 160 TGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 192
TGH V +FHP+ + ++ S S TIR WD+
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 218
Score = 148 (57.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TLLGH I + FH ++ S S D I++W + + CI H
Sbjct: 86 IRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 145
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V C +F P + SA+ D T+++WD++
Sbjct: 146 TQAVRCLRFSPDGKWLASAADDHTVKLWDLT 176
Score = 141 (54.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GCI + ++ CL F + + DD+ +K+W+ K +F
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 118 LGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH ++L S S TIR W + + + + V C F+P D
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ ++RV+
Sbjct: 244 CCLYGGFQDSLRVY 257
Score = 138 (53.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ VW+ Q + L GH I + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP V S SLD I++WD+
Sbjct: 93 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 133
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 231 HTLHICNRKMEPLCNIHENTRVKSG 255
H +C ++++ + NI +N SG
Sbjct: 619 HKCRLCYKQLKNISNIVKNKSGLSG 643
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 164 (62.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 160 TGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 192
TGH V +FHP+ + ++ S S TIR WD+
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Score = 161 (61.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ VW+ + C+ +L GH I + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP V S SLD I++WD+
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Score = 148 (57.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TLLGH I + FH ++ S S D I++W + + CI H
Sbjct: 87 IRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V C +F P + SA+ D T+++WD++
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 141 (54.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 44/194 (22%), Positives = 80/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GCI + ++ CL F + + DD+ +K+W+ K +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 118 LGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH ++L S S TIR W + + + + V C F+P D
Sbjct: 186 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNP-DG 244
Query: 177 IVVSASLDQTIRVW 190
+ ++RV+
Sbjct: 245 CCLYGGFQDSLRVY 258
Score = 37 (18.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 231 HTLHICNRKMEPLCNIHENTRVKSG 255
H +C ++++ + NI +N SG
Sbjct: 620 HKCRLCYKQLKNISNIVKNKSGLSG 644
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 408
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 466
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 467 RGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 439 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 495
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
C+ VL GH V C +F + +VS + D I+VWD+ AP G L L
Sbjct: 496 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLMAALDPR-APA-GTLCLRTL 551
Query: 213 SKH 215
+H
Sbjct: 552 VEH 554
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTC 399
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 408
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 466
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 467 RGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 439 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 495
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
C+ VL GH V C +F + +VS + D I+VWD+ AP G L L
Sbjct: 496 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLMAALDPR-APA-GTLCLRTL 551
Query: 213 SKH 215
+H
Sbjct: 552 VEH 554
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 196 RKKNVAPGMGKLVLSMKSKHPIWKYC 221
N + VL ++ + + C
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNGMMVTC 399
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 2 LTKFETKSARVKG---LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGIC 58
L + +S KG L + ++ I+S L + I++WD H G V +C
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQK--IVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LC 348
Query: 59 FHNQQPIFVSGGK-MIVMAYQ---GCILESRNEPC--LFRIKSVLG------DDYKIKVW 106
+ + ++G V + G +L + C + ++ G D I VW
Sbjct: 349 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 408
Query: 107 NYKQRKCIF---TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+ I L+GH + F +Y I+SAS D+TI++W + + L GH
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHK 466
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ C Q+ D +VVS S D TIR+WDI
Sbjct: 467 RGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 43/124 (34%), Positives = 60/124 (48%)
Query: 93 IKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
I S GD IKVWN + + TL GH I + ++S S D TIR+W +
Sbjct: 439 IVSASGDR-TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL--VVSGSSDNTIRLWDIEC 495
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD-ISGLRKKNVAPGMGKLVLSM 211
C+ VL GH V C +F + +VS + D I+VWD ++ L + AP G L L
Sbjct: 496 GACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPR--APA-GTLCLRT 550
Query: 212 KSKH 215
+H
Sbjct: 551 LVEH 554
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
I+S D TI+IW + C +LTGH V+C Q+ + ++++ S D T+RVWD++
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 371
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 105 VW-NY-KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN---CICVL 159
+W NY + +CI TL GH + +++ ++ + + S D+++ IW N C VL
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
TGH V Q+HPT D++ S S D TI+VW
Sbjct: 160 TGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 137 (53.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 50/193 (25%), Positives = 84/193 (43%)
Query: 100 DYKIKVWNYKQRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D KIKVW K KC+ H + + F ILS S D +++I +S + +
Sbjct: 296 DNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKI 355
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLV--LSMKSKH 215
GH +V F+ +D V+S S D I++WD S + + P V +S++S
Sbjct: 356 FRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSIT 415
Query: 216 PIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIK-YA 274
+ K NP+ L +CN + ++ T K+ + S F+ T + ++ Y
Sbjct: 416 ILLK--------NPEFLL-VCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYL 466
Query: 275 IVNGDHGIIRTLD 287
+ I+ T D
Sbjct: 467 YAVDEDNILYTFD 479
Score = 62 (26.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL 43
KF K+ + + + F P ++L+ +G I++WDY L
Sbjct: 221 KFNNKN-KPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKL 259
Score = 46 (21.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK---FDEHEGPVRGIC 58
G++ +R ++ L+N +I + R+ +LL + + +H+G + C
Sbjct: 143 GITTEKRRKQLIEQLNNEIITVPSSRLLSLLSQSLHWQKHQGIIPDDC 190
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 163 (62.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ +++ CIF H +R F + W+ SA+DD T+++W + +
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
TGH V +FHP++ + + + +TIR WD+
Sbjct: 186 TGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDL 218
Score = 161 (61.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
R+ + GDD ++ VW+ + C+ +L GH I + + I++ S +IR+W +
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + L GH + FHP V S SLD I++WD+
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Score = 148 (57.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I+VW+ + K + TLLGH I + FH ++ S S D I++W + + CI H
Sbjct: 87 IRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSH 146
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V C +F P + SA+ D T+++WD++
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Score = 136 (52.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 44/194 (22%), Positives = 81/194 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
++ L K I++ +G I++WD +L H+ + + FH SG
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 71 ----KMIVMAYQGCILESRNEP----CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K+ + +GCI + ++ CL F + + DD+ +K+W+ K +F
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 185
Query: 118 LGHLDYIRTTFFH-HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + FH EYP + + +TIR W + + + + V C F+P D
Sbjct: 186 TGHYGPVNVVEFHPSEYP-LAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNP-DG 243
Query: 177 IVVSASLDQTIRVW 190
+ ++RV+
Sbjct: 244 CCLYGGFQDSLRVY 257
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 231 HTLHICNRKMEPLCNIHENTRVKSG 255
H +C ++++ + NI +N SG
Sbjct: 620 HKCRLCYKQLKNISNIVKNKSGLSG 644
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 158 (60.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 41/202 (20%), Positives = 89/202 (44%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + L P + ++ + + LW+++ + ++ H+ V + F
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 65 IFVSGGK-----MIVMAYQGCILESRNEPCLFR---------IKSVLGDDYKIKVWNYKQ 110
+ S + + + +G E + R + +D IKVW+ +
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ 170
++ +++L H ++R F + I+S S+D+TI+IW ++ C+ + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 171 FHPTDDIVVSASLDQTIRVWDI 192
F+P+ + SA DQT++VWD+
Sbjct: 194 FNPSGTCIASAGSDQTVKVWDV 215
Score = 144 (55.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH--NQQPIFVSG 69
V + F P + S+ + ++LW +F H PVR + F Q S
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 70 GKMIVM--AYQGCILES--RNEP---CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K I + Y+ L S R+ C F R+ +D IK+W+ ++C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+ + F+ I SA DQT+++W + + H+ V C FHP+D+
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 178 VVSASLDQTIRVWDI 192
+V+AS D T+++ D+
Sbjct: 243 LVTASSDGTLKILDL 257
Score = 37 (18.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 503 QCYQLTTSGKFVDAIEKLRNVLISIPLLVVTTKKEIEEAKQII 545
+C TT K D + SIPL V + I E ++
Sbjct: 373 ECSPTTTKKKTEDMSDLPSESQRSIPLAVTDALEHIMEQLNVL 415
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R + P++ S +D+ ++ W + I
Sbjct: 229 DRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHY 288
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
GH V HPT D++V+ S D T RVWDI + G V ++K
Sbjct: 289 HGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVK 341
Score = 138 (53.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 44/195 (22%), Positives = 74/195 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ N+ P S G+
Sbjct: 211 VRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGE 270
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + + P + + D +VW+ + + + T
Sbjct: 271 DKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTI-DVLVTCSRDATARVWDIRTKANVHT 329
Query: 117 LLGHLDYIRTTFFHHEYPWILSA-SDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTD 175
L GH + + T P +++ S D TIR+W + LT H V HP
Sbjct: 330 LSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQ 389
Query: 176 DIVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 390 YTFASGSPDN-IKQW 403
Score = 128 (50.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G + +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 250 ISTVRGVAVSNRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTI 304
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSA-SLDQTIRVWDI 192
+++ S D T R+W +++ + L+GH + V + + VV+ S D TIR+WD+
Sbjct: 305 DVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDL 364
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/201 (23%), Positives = 88/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E S RV + +HP ++ ++ ++ +LWD + + H V I FH +
Sbjct: 319 EGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSL 378
Query: 66 FVSGGK------------MIVMAYQGCILE--SRN-EPCLFRIKSVLGDDYKIKVWNYKQ 110
+GG +M +G + E N P + + + GD+ KVW+ +Q
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDN-TCKVWDLRQ 437
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
RKCI+T+ H + + F + ++L+ + D T +IW + + L GH VM
Sbjct: 438 RKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
++ + S D+T ++W
Sbjct: 498 DISLDGQLIATCSYDRTFKLW 518
Score = 128 (50.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+VW+ + +CI L GHL I F + + S D T ++W + R CI + H
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQ 448
Query: 164 HYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV 208
+ V +F P + +++ + D T ++W G K +A GK++
Sbjct: 449 NLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVM 495
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 136 (52.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D IKVW+ +Q K +T+ GH D + E ++LS + D T+R+W +
Sbjct: 212 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 271
Query: 154 NCICVLTG--HN---HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
C+ + G HN + + C+ + P + + S D+ + VWD + R PG
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 325
Score = 59 (25.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 16 SFHPKR--PWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
S +P R P ++ + +G ++LWD R ++ F ++ V + F++ +SGG
Sbjct: 156 SCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGG 212
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 153 (58.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK---MIVMAYQGC--ILESRNEP-- 88
+DY++ + F HE PV + + I VS G+ V+ C +L
Sbjct: 340 FDYKLKNI---FRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDW 396
Query: 89 ---CLF-----RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSAS 140
C F ++ + GD +K+W+ + CI T GH + + +H ++ S+S
Sbjct: 397 LSDCCFHPSGDKLATSSGDT-TVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSS 455
Query: 141 DDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
D+T +IW S C C L GH V +F P + ++++S D+T+ +WD
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWD 506
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G+D KV + + T GH D++ FH + ++S D T+++W +CI
Sbjct: 371 GEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCIL 430
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
GH+ V +H + V S+SLD+T ++WD++ R
Sbjct: 431 TFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSER 469
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D K+W+ +C TL GH D + + F +L++S D+T+ IW ++ C L
Sbjct: 457 DKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSL 516
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGL 195
GH H + A F P ++ S ++WD L
Sbjct: 517 YGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKL 552
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LSS +G ++LW + T L + H PV F FVS
Sbjct: 544 SGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 603
Query: 69 GGKMIVMA------YQ------GCILE---SRNEPCLFRIKSVLGDDYKIKVWNYKQRKC 113
GG V YQ G + + +R P + + D +++W+ C
Sbjct: 604 GGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADR-TVRLWDVLNGNC 662
Query: 114 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
+ GH I + F ++ + + D + +W + L GH V +F
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 174 TDDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 723 DGEILASGSMDNTVRLWD 740
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 564 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 623
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C ++HP + V + S D+T+R+WD+
Sbjct: 624 FAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T +H ++ + S D+T+R+W + NC+
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + F + ++LS+S+D T+R+W Q+ C+
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 613
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 48/218 (22%), Positives = 90/218 (41%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ + P W S + +I++WD L H VR + + P SGG+
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGE 246
Query: 72 ------------MIVMAYQGCI--LESRN-EPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + +++ + P L + D +VW+ + + +
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSL-DVLVTCARDSTARVWDMRTKAQVHC 305
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
GH + + P +++AS D T+R+W + +C LT H V HP +
Sbjct: 306 FAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLN 365
Query: 177 IVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLVLSMKS 213
+ SAS D I+ W + G +N++ G ++ ++ S
Sbjct: 366 MFASASPDN-IKQWKLPKGEFMQNLS-GHNAIINTLSS 401
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 155 (59.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
GDDYK+ +W+ + +L GH + + F+ E +L+ + I++W + +
Sbjct: 35 GDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVR 94
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198
TGH +FHP + + S S D +RVWD RKK
Sbjct: 95 AFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDT---RKK 132
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+ ++ K + GH FH ++ S S D +R+W + + CI GH
Sbjct: 82 IKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGH 141
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ +F P VVS LD ++VWD++
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 172
Score = 144 (55.7 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 48/206 (23%), Positives = 87/206 (42%)
Query: 2 LTKFETKSARVKGLSFHPKRP-WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
L +F S V LS K +L+ + + LW T H PV + F+
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN 67
Query: 61 NQQPIFVSGG-----KM-------IVMAYQGCILE-SRNEPCLFRIKSVLGD-DYKIKVW 106
+++ + ++G K+ +V A+ G S E F G D ++VW
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVW 127
Query: 107 NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166
+ +++ CI T GH I T F + W++S D +++W + + H +
Sbjct: 128 DTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPI 187
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWDI 192
FHP + ++ + S D+T++ WD+
Sbjct: 188 RSLDFHPLEFLLATGSADRTVKFWDL 213
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 150 (57.9 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
F+ A + F P I ++ + + LW + + ++ H+ V + F Q
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 65 IFVSGGKMIVMAYQGCILESRNEPCLFR-----IKSV-----------LGDDYKIKVWNY 108
+ S + + +L+ + + F+ ++SV +D IKVW+
Sbjct: 74 LLASASRDRTVRLW--VLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
+++ +++L H ++R F + I+S S+D+TI+IW ++ C+ + +
Sbjct: 132 FRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 169 AQFHPTDDIVVSASLDQTIRVWDI 192
F+P + SA D +++WDI
Sbjct: 192 VDFNPNGTCIASAGSDHAVKIWDI 215
Score = 130 (50.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 46/195 (23%), Positives = 82/195 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V L F P+ + S+ + ++LW +F H PVR + F + V+
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122
Query: 71 -KMIVM--AYQGCILES--RNEP---CL-F----RIKSVLGDDYKIKVWNYKQRKCIFTL 117
K I + ++ L S R+ C F R+ +D IK+W+ ++C+
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
+ + F+ I SA D ++IW + + H+ V C FHP +
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS 242
Query: 178 VVSASLDQTIRVWDI 192
+V+AS D T+++ D+
Sbjct: 243 LVTASSDGTVKMLDL 257
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 48/210 (22%), Positives = 91/210 (43%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+L FE R+ ++FHP ++ ++ ++ +LWD L + H V GI F
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQ 390
Query: 61 NQQPIFVSGGK------------MIVMAYQGCI--LESRN-EPCLFRIKSVLGDDYKIKV 105
+ S G ++ +QG I + S N P + + S G+D + ++
Sbjct: 391 QDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG-GEDNQCRI 449
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILS-ASDDQTIRIWYWQSRNCICVLTGHNH 164
W+ + RK ++ + H + + + + + L+ AS D + IW + + + L GH
Sbjct: 450 WDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHES 509
Query: 165 YVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
V + + S D+TI++W SG
Sbjct: 510 KVASLDITADSSCIATVSHDRTIKLWTSSG 539
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 153 (58.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN-CICVLTG 161
I+ W+ +K TL GH+ RT F+ +++S S+D T+R+W Q+ N CI V G
Sbjct: 84 IRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCIKVCRG 143
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H +V +F P + SA L+ +I +WDI
Sbjct: 144 HMSHVNSVKFSPDGLWIASAGLEGSILIWDI 174
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G+D + +W Q +C +L GH I F ++ ++ SA D IR W S+
Sbjct: 37 GEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYS 96
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
L GH F+P+ + VVS S D T+R+WD+
Sbjct: 97 TLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRLWDV 131
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 537 EIEEAKQIINICKEYIVGTNHIKYAIVNGDHGIIRTLDLPIYITKI-KGNQVYYLDRECS 595
+++ I +C+ ++ N +K++ +G L+ I I I K Q+ ++
Sbjct: 130 DVQNENNCIKVCRGHMSHVNSVKFS-PDGLWIASAGLEGSILIWDIRKSKQI--MEFIAD 186
Query: 596 PHVLRIDPTEFK-FKLALINHKYEEVLHI--VRNSRLVGQSIIAYLQ 639
P V I +F F+ L + + + I + + +LV Q+ Y Q
Sbjct: 187 PPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQ 233
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 150 (57.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 227 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHY 286
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
GH V HPT D++V+ S D T R+WD+ + G V ++K
Sbjct: 287 HGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVK 339
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 248 ISTVRGVIVSARS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 302
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + VV+ S D TIR+WD+
Sbjct: 303 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDL 361
Score = 129 (50.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 42/194 (21%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 209 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGE 268
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + D ++W+ + + + T
Sbjct: 269 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWDVRTKASVHT 327
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P +++ S D TIR+W + LT H V HP
Sbjct: 328 LSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHY 387
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 388 TFASGSPDN-IKQW 400
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 116 (45.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D IKVW+ C TL GH + + R FF+ E+P +LS D I++W ++ I
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
L H+ + + +A D + W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 101 (40.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/143 (26%), Positives = 59/143 (41%)
Query: 83 ESRNEPCLFRIKSVLGDDYKIKVW------NYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+S+NEP F + D IK W N + +T H I + +
Sbjct: 437 KSQNEP-KFLVTG--STDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYF 493
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
+AS D+ ++W S I VL GH + F+ D ++V+ S D+TI+VW +
Sbjct: 494 ATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFS 553
Query: 197 KKNVAPGMGKLVLSMK---SKHP 216
K G V +K +HP
Sbjct: 554 CKKTLEGHTNSVQRVKFFNREHP 576
Score = 86 (35.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 15 LSFHPK---RPWILSSLHN-GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
L+FH + + W L+S G +++WD + +H VRG+ F +F+SGG
Sbjct: 149 LTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGG 208
Query: 71 K-MIVMAY 77
+ +V+ Y
Sbjct: 209 RDNVVIIY 216
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 116 (45.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYI-RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D IKVW+ C TL GH + + R FF+ E+P +LS D I++W ++ I
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKS 600
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
L H+ + + +A D + W
Sbjct: 601 LDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 101 (40.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 38/143 (26%), Positives = 59/143 (41%)
Query: 83 ESRNEPCLFRIKSVLGDDYKIKVW------NYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+S+NEP F + D IK W N + +T H I + +
Sbjct: 437 KSQNEP-KFLVTG--STDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYF 493
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
+AS D+ ++W S I VL GH + F+ D ++V+ S D+TI+VW +
Sbjct: 494 ATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFS 553
Query: 197 KKNVAPGMGKLVLSMK---SKHP 216
K G V +K +HP
Sbjct: 554 CKKTLEGHTNSVQRVKFFNREHP 576
Score = 86 (35.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 15 LSFHPK---RPWILSSLHN-GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
L+FH + + W L+S G +++WD + +H VRG+ F +F+SGG
Sbjct: 149 LTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGG 208
Query: 71 K-MIVMAY 77
+ +V+ Y
Sbjct: 209 RDNVVIIY 216
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/197 (25%), Positives = 81/197 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
S V G SF P R ++LS +G ++LW + T L + H PV F FVS
Sbjct: 523 SGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVS 582
Query: 69 GGKMIVMA------YQGCILES---RNEPCL-FRIKS---VLGD-DYKIKVWNYKQRKCI 114
GG V YQ + + + C F S G D +++W+ C+
Sbjct: 583 GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCV 642
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
GH I + F ++ + + D + +W + L GH + +F
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRD 702
Query: 175 DDIVVSASLDQTIRVWD 191
+I+ S S+D T+R+WD
Sbjct: 703 GEILASGSMDNTVRLWD 719
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
+D +++W+ + C+ GH + T F + +S D+ R+W + +
Sbjct: 543 EDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI 602
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V C +FHP + + + S D+T+R+WD+
Sbjct: 603 FAGHLADVTCTRFHPNSNYIATGSADRTVRLWDV 636
Score = 132 (51.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G D ++W + + GHL + T FH +I + S D+T+R+W + NC+
Sbjct: 584 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR 643
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GL 195
+ TGH + F P + + + D + +WDI GL
Sbjct: 644 IFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGL 682
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD ++ + K + L GH + T F + ++LS S+D T+R+W Q+ C+
Sbjct: 501 DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVG 560
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GHN+ V QF P VS D+ R+W
Sbjct: 561 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 592
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 150 (57.9 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 91 FRIKSVLGDDYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
F ++V+ D +K W N+ + I H D +R + LSASDD T++I+
Sbjct: 126 FNFETVM-DKGDVKYWRPNFNNVETIDD--AHHDAVRDLAWSPSDTKFLSASDDTTLKIY 182
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ +R C VLTGHN V +HPT ++VS S D ++ WD
Sbjct: 183 DFTARTCDTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWD 225
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSR-NCICVL 159
+IK+W+ K + L+ H D +R F + +L SAS D+T+R+W + N + VL
Sbjct: 152 RIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVL 211
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH ++V C+ F P ++ S + + +WD+
Sbjct: 212 RGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDM 244
Score = 114 (45.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQR-KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D ++VW+ K + L GH +++ + F + + S + + +W I
Sbjct: 193 DKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRK 252
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
L GH++ V+C +F P ++ +AS D + VWD
Sbjct: 253 LEGHHNDVVCCEFSPDGALLATASYDTRVIVWD 285
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 24 ILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
+ + L+NG I++WD LL +H VR + F
Sbjct: 144 LATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTF 179
>TAIR|locus:2153443 [details] [associations]
symbol:AT5G54200 "AT5G54200" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB013387 HOGENOM:HOG000239143 IPI:IPI00537060
RefSeq:NP_200231.1 UniGene:At.27971 ProteinModelPortal:Q9FK21
SMR:Q9FK21 PRIDE:Q9FK21 EnsemblPlants:AT5G54200.1 GeneID:835508
KEGG:ath:AT5G54200 TAIR:At5g54200 InParanoid:Q9FK21 OMA:KERRSTD
PhylomeDB:Q9FK21 ProtClustDB:CLSN2916439 Genevestigator:Q9FK21
Uniprot:Q9FK21
Length = 825
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 91 FRIKSVLGDDYKIK--VWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
F KSV D+ + V+ + K + + +GHLD + + +LS+S D+T+R+W
Sbjct: 437 FSRKSVSLDNVLVPEAVFGLSE-KPVCSFVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLW 494
Query: 149 YWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDI 192
S+ C+ V + H+ YV C QF+P DD +S SLD +R+W I
Sbjct: 495 DLSSKTCLKVFS-HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSI 538
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 154 (59.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA--SDDQTIRIWYWQSRNCIC 157
D K+K+WN + KC++ H + + F++ L A SDD I++W + + C
Sbjct: 677 DKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRN 736
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ GH + V +F P DD + S S D T+++W++
Sbjct: 737 TMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNV 771
Score = 96 (38.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154
DD IK+W+ K + C T+ GH++ + F +I S S D T+++W S N
Sbjct: 720 DDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN 775
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+I +W +S + + GH +V C F + +++S DQTIR+W+ + + K + A
Sbjct: 862 SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDA-- 919
Query: 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVF 263
VL KS+ + V + L I N+K L N + ++ + ES +
Sbjct: 920 ----VL--KSELDV------VFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEPQESLIC 967
Query: 264 IYTTSNHIKYAIVNGDHGIIRTLDL 288
S +K+A ++G I+ L L
Sbjct: 968 CCCLSEDLKFAAFGQENGAIKVLRL 992
Score = 44 (20.5 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+++W+ R L ++EH V F+N++
Sbjct: 680 VKIWNSRTGKCLYVYEEHTEQVNCCQFNNRR 710
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 154 (59.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSA--SDDQTIRIWYWQSRNCIC 157
D K+K+WN + KC++ H + + F++ L A SDD I++W + + C
Sbjct: 678 DKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRN 737
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ GH + V +F P DD + S S D T+++W++
Sbjct: 738 TMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNV 772
Score = 96 (38.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN 154
DD IK+W+ K + C T+ GH++ + F +I S S D T+++W S N
Sbjct: 721 DDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN 776
Score = 93 (37.8 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+I +W +S + + GH +V C F + +++S DQTIR+W+ + + K + A
Sbjct: 863 SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNKVCKSSDA-- 920
Query: 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVF 263
VL KS+ + V + L I N+K L N + ++ + ES +
Sbjct: 921 ----VL--KSELDV------VFHNGEVMILAIYNQKHIQLINGNTDSIIMQTEPQESLIC 968
Query: 264 IYTTSNHIKYAIVNGDHGIIRTLDL 288
S +K+A ++G I+ L L
Sbjct: 969 CCCLSEDLKFAAFGQENGAIKVLRL 993
Score = 44 (20.5 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 33 IQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+++W+ R L ++EH V F+N++
Sbjct: 681 VKIWNSRTGKCLYVYEEHTEQVNCCQFNNRR 711
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 149 (57.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IKVW+ + TL GH+ IR +P++ S +D + W +S +
Sbjct: 228 DNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNY 287
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
GH V HPT D++ S D +RVWD+ G +LS+KS++
Sbjct: 288 YGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQN 343
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
V A +G + SR+ P LF + G+D K+ W+ + K + GH + + H
Sbjct: 249 VSAIRGLEVSSRH-PYLFSV----GEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTL 303
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ S D +R+W ++R I + GH ++ + D V+S S+D T+++WD++
Sbjct: 304 DVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLA 363
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/195 (23%), Positives = 82/195 (42%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
++GL + P++ S + + WD N + + H V + H + SGG+
Sbjct: 252 IRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGR 311
Query: 72 ---MIV--MAYQGCILESR-NEPCLFRIKSVLGD--------DYKIKVWNYKQRKCIFTL 117
+ V M + I E + ++ + +KS D D +K+W+ TL
Sbjct: 312 DNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATL 371
Query: 118 LGHLDYIRTTFFHH-EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
H +R+ H EY + A+D+ I+ W + I L+GHN + + D+
Sbjct: 372 TNHKKGVRSMVIHEKEYSFATGAADN--IKQWKCPDGSFIKNLSGHNSIINAMALN-ADN 428
Query: 177 IVVSASLDQTIRVWD 191
++VS + +I WD
Sbjct: 429 VLVSGGDNGSISFWD 443
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 150 (57.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 43/195 (22%), Positives = 79/195 (40%)
Query: 4 KFETKSARV--KGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
K KS+RV G H W + N ++ L+ + FD EG V
Sbjct: 23 KIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEGLVAAGAASG 81
Query: 62 QQPIFVSGGKMIVMAYQG----CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
++ +V G C+ + + F L D +K+W+ +++ CI T
Sbjct: 82 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSL--DTNLKIWDIRKKGCIHTY 139
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
GH + F + WI+S +D +++W + + H + FHP + +
Sbjct: 140 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 199
Query: 178 VVSASLDQTIRVWDI 192
+ + S D+T++ WD+
Sbjct: 200 LATGSADKTVKFWDL 214
Score = 136 (52.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+ ++ K + TL GH + FH + S S D ++IW + + CI GH
Sbjct: 83 IKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V +F P +VS D ++VWD++
Sbjct: 143 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Score = 50 (22.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 514 VDAIEKLR-NVLISIPLLVVTTKKEIEEAKQIINICKEYIVGTNHIKYAIVNGDHGIIRT 572
+ +IEK+ N +I+ LL+V + EI ++ C + + + N D +
Sbjct: 708 ISSIEKMADNAVIADVLLIVNERPEI----LTLDTCTSLLPLLTALLGS--NMDSHLSVC 761
Query: 573 LDLPIYITKIKGNQVY 588
LDL + + ++ G+Q+Y
Sbjct: 762 LDLLLKLVRMYGSQIY 777
Score = 38 (18.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 277 NGDHGIIRTLDLPIYITKIKGNQVY 301
N D + LDL + + ++ G+Q+Y
Sbjct: 753 NMDSHLSVCLDLLLKLVRMYGSQIY 777
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I +++ K + TL GH IR+ F + +++ASDD I+I+ Q N L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+V+ F P D VS+S D++I+VWD S
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTS 262
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IK+++ + TL GH ++ + F + +S+S D++I++W SR+C+
Sbjct: 210 DDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNT 269
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H V +++PT +VSA D+ I ++D
Sbjct: 270 FFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I +++ K + TL GH IR+ F + +++ASDD I+I+ Q + L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+V+ F P D VS+S D++++VWD+S
Sbjct: 232 GSWVLNVAFSPDDTHFVSSSSDKSVKVWDVS 262
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IK++ + TL GH ++ F + +S+S D+++++W +R C+
Sbjct: 210 DDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHT 269
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H V +++ +VS + DQ I V+D
Sbjct: 270 FLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 149 (57.5 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 100 DYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
D KIK+W Y +R+C+ T +GH +R F++ LSA+ D+ I++W ++ CI
Sbjct: 309 DCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISR 368
Query: 159 LTGHNHYVMCAQFHPTDD---IVVSASLDQTIRVWDI-SG 194
T C +F+P +D ++V+ D+ I WDI SG
Sbjct: 369 FTNRK-VPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSG 407
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 146 (56.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147
P I + DD I++WN Q++CI L H +I T F + ++S S D+TI I
Sbjct: 78 PINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITI 137
Query: 148 WYWQSRN--CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
W S + L H+ V P D I+VSAS D +R++D+
Sbjct: 138 WDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDL 184
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-SASDDQTIRIWYWQSRNCICVLT 160
KI ++N K I TL GH I + IL S SDD TIR+W + CI +L
Sbjct: 49 KIYIYNTTTGKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLR 108
Query: 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
H +++ +F +I++S S D+TI +WDI+
Sbjct: 109 KHTYHITTLKFTQKGNILISGSSDETITIWDIT 141
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 224 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHY 283
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++V+ S D T R+WD+
Sbjct: 284 HGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 316
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 245 ISTVRGVIVSTRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 299
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + +++ S D TIR+WD+
Sbjct: 300 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/194 (22%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + D ++W+ + + + T
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWDVRTKASVHT 324
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P I++ S D TIR+W + LT H V HP
Sbjct: 325 LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHY 384
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 385 TFASGSPDN-IKQW 397
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 225 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHY 284
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++V+ S D T R+WD+
Sbjct: 285 HGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 246 ISTVRGVIVSTRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + +++ S D TIR+WD+
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/194 (22%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + D ++W+ + + + T
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWDVRTKASVHT 325
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P I++ S D TIR+W + LT H V HP
Sbjct: 326 LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHY 385
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 386 TFASGSPDN-IKQW 398
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 225 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHY 284
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++V+ S D T R+WD+
Sbjct: 285 HGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 246 ISTVRGVIVSTRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + +++ S D TIR+WD+
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 359
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/194 (22%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 266
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + D ++W+ + + + T
Sbjct: 267 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWDVRTKASVHT 325
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P I++ S D TIR+W + LT H V HP
Sbjct: 326 LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHY 385
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 386 TFASGSPDN-IKQW 398
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 226 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHY 285
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++V+ S D T R+WD+
Sbjct: 286 HGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 318
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 247 ISTVRGVIVSTRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 301
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + +++ S D TIR+WD+
Sbjct: 302 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 360
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 43/194 (22%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 267
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P + + D ++W+ + + + T
Sbjct: 268 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWDVRTKASVHT 326
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P I++ S D TIR+W + LT H V HP
Sbjct: 327 LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHY 386
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 387 TFASGSPDN-IKQW 399
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 149 (57.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 49/197 (24%), Positives = 81/197 (41%)
Query: 21 RPWILSSLHNGVIQ------LWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
R W L S N V+ +WD ++ +L H+ R F P+ + G +
Sbjct: 385 RYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 444
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
A C+ N L + D +++W+ +Q + GH + + F
Sbjct: 445 ---ADVDCVKFHPNSNYL----ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 497
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ SA +DQ +++W S L GH + F P ++ SAS+D ++RVWDI
Sbjct: 498 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Query: 193 SGLRKKNVAPGM-GKLV 208
A G G+LV
Sbjct: 558 RNTYCSTPADGSSGELV 574
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 151 (58.2 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIR 146
C + + G D IK+W+ ++ C L G + FH + + S+S D IR
Sbjct: 116 CTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIR 175
Query: 147 IWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAP 202
IW +S C+CVL H V F P +VS+ D+ VWD+ + K P
Sbjct: 176 IWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIP 231
Score = 121 (47.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 93 IKSVLGD---DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWY 149
+ +LG D +++W+ + C+ T GH + F ++S+ D +++W
Sbjct: 537 VDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWT 596
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209
++ C+ L H V D+++V+ S D TI VW LRK + K+
Sbjct: 597 IKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWT-DKLRKTVIIKSTKKVDQ 655
Query: 210 SM-KSKH 215
S+ K H
Sbjct: 656 SLFKFTH 662
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ S S D+T ++W + V GH V QF P D I+ SAS D ++R+W I
Sbjct: 499 LASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSI 555
Score = 71 (30.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 15 LSFHP--KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
+ FHP R + SS + I++WD R + + + H PV + F VS G+
Sbjct: 154 VEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGR 212
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 103 IKVWNYKQRKCIFT 116
++VW+ +C+FT
Sbjct: 269 LRVWDSSSSRCVFT 282
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 143 (55.4 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF-HHEYPWIL-SASDDQTIRIWYWQSRNC 155
G + +KVW+ + GH I F H+ W+L S +DD +R+W S
Sbjct: 122 GAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRS 181
Query: 156 ICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ V GH+ + F PT ++S S D+T++VW+I
Sbjct: 182 MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNI 218
Score = 125 (49.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++WN ++C+ TL GH I + + ++SA+ D +++W S C+ L
Sbjct: 528 DRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATL 587
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW-DIS 193
H V ++VS D + VW D++
Sbjct: 588 DNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVT 622
Score = 125 (49.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
RI + D IK+W+ + + L GH + F+ + S S D+TIRIW
Sbjct: 478 RIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
++ C+ L GH ++ + VVSA+ D ++VW +S
Sbjct: 538 TQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Score = 74 (31.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 5 FETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQP 64
FE S+ ++GL+F P ++LS + +Q+W+ + + + V I + N QP
Sbjct: 185 FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQP 243
Query: 65 ----IFVSGGKMIVMAY 77
++ +G +++A+
Sbjct: 244 EEKILYTAGEGNLILAW 260
Score = 70 (29.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 23 WILSS-LHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
W+L+S + ++LWD + + F+ H +RG+ F +SG +
Sbjct: 160 WVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSR 209
Score = 58 (25.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 1 MLTKFETKSAR-VKGLSFH----------PKRPWILSSLHNGVIQLWDYRMNTLLEKFDE 49
+LT +E S R +K + H P + + G++++WD + F
Sbjct: 84 LLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRG 143
Query: 50 HEGPVRGICFHNQQPIFV 67
H G + +CF Q +V
Sbjct: 144 HGGVISALCFGKHQNTWV 161
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 149 (57.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 47/210 (22%), Positives = 87/210 (41%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI----------- 57
S V +F P ++LSS + I+LW ++N L + H PV
Sbjct: 418 SGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS 477
Query: 58 CFHNQ----------QPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107
C H++ QP+ + G + + C+ N C + D +++W+
Sbjct: 478 CSHDRTARIWSMDRIQPLRIMAGHLSDV---DCVQWHPN--CNYIATG--SSDKTVRLWD 530
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVM 167
+ +C+ +GH + + + ++ S +D TI +W + CI L GHN V
Sbjct: 531 VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVW 590
Query: 168 CAQFHPTDDIVVSASLDQTIRVWDISGLRK 197
+ ++ S S D T+++WD++ K
Sbjct: 591 SLSYSGEGSLLASGSADCTVKLWDVTSSTK 620
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++W+ K + GH + F + S S D+T RIW + ++
Sbjct: 439 DTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIM 498
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK 219
GH V C Q+HP + + + S D+T+R+WD+ + G +VLS+ + P +
Sbjct: 499 AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSL-AMSPDGR 557
Query: 220 Y 220
Y
Sbjct: 558 Y 558
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ-SRNCICVLTGHNHYVMCA 169
R+ LLGH + + F ++LS+S D TIR+W + + N +C GHN+ V A
Sbjct: 408 RRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCY-KGHNYPVWDA 466
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
QF P S S D+T R+W + ++ + G
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAG 500
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 147 (56.8 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 52/193 (26%), Positives = 85/193 (44%)
Query: 23 WILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG------KMIVMA 76
WI SS ++ I++WD + L H V + + + SG K +
Sbjct: 282 WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYDHTDFKPKSFS 340
Query: 77 YQGCILESRNEPCLFRIKSVL---GDDYKIKVWN-YKQRKCIFTLLGHLDYIRTTFFHHE 132
+ + R E CL + L DD ++ +W+ K K I + GH + F +
Sbjct: 341 DERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPD 400
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV-MCAQFHPTDD-IVVSASLDQTIRVW 190
I +AS D ++R+W ++ + L GH V CA TD ++VS+S D T++VW
Sbjct: 401 GRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAW--STDSRLLVSSSQDTTLKVW 458
Query: 191 DISGLRKKNVAPG 203
D+ + K PG
Sbjct: 459 DVRSKKMKFDLPG 471
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++WN K R +FTL GH I + + WI S+S D+TIRIW + C+ +L
Sbjct: 248 DNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHIL 306
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQT 186
GH V T+ ++ S + D T
Sbjct: 307 KGHAARVNHLSLS-TEHVLRSGAYDHT 332
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +++W+ K K + TL GH+ + + + ++S+S D T+++W +S+ L
Sbjct: 410 DSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDL 469
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
GH V + P V S D+ +R+W
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 148 (57.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 49/197 (24%), Positives = 80/197 (40%)
Query: 21 RPWILSSLHNGVIQ------LWDYRMNTLLEKF--DEHEGPVRGICFHNQQPIFVSGGKM 72
R W L S N V+ +WD ++ F H+ R F P+ + G +
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 426
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
A C+ N L + D +++W+ +Q + GH + + F
Sbjct: 427 ---ADVDCVKFHPNSNYL----ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPN 479
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ SA +DQ +++W S L GH + F P ++ SAS+D ++RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Query: 193 SGLRKKNVAPGM-GKLV 208
A G G+LV
Sbjct: 540 RSTCCNTPADGSSGELV 556
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 147 (56.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ K +L GH+ +R P++ S +D+ ++ W + I
Sbjct: 224 DRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHY 283
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
GH V HPT D++V+ S D T R+WD+
Sbjct: 284 HGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G I+ +R+ P LF G+D ++K W+ + K I GHL + H
Sbjct: 245 ISTVRGVIVSTRS-PYLFSC----GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTL 299
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ S D T RIW +++ + L+GH + V + + +++ S D TIR+WD+
Sbjct: 300 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL 358
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/194 (22%), Positives = 72/194 (37%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V+ ++ P W ++ + I++WD L H VRG+ + P S G+
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGE 265
Query: 72 ------------MIVMAYQG---CILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
++ Y G + P L + D ++W+ + + + T
Sbjct: 266 DKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTL-DVLVTCSRDSTARIWDVRTKASVHT 324
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + T P I++ S D TIR+W + LT H V HP
Sbjct: 325 LSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLY 384
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 385 TFASGSPDN-IKQW 397
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 144 (55.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW----YWQSR 153
G D ++K+W+ +++ + L GH D I E +IL+ + D T+R+W Y
Sbjct: 201 GIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGE 260
Query: 154 NCICVLTGHNH-----YVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLV 208
C+ V GH H + CA + P D + S S D+ + +WD++ R PG V
Sbjct: 261 RCVKVFQGHQHNFEKNLLRCA-WSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSV 319
Query: 209 --LSMKSKHPI 217
+ K P+
Sbjct: 320 NAVDFSPKEPL 330
Score = 126 (49.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 114 IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW--YWQSRNCICVLTGHNHYVMCAQF 171
I L GH I T FH E +LS+ D+ I IW Y N + ++GH+ VM A F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCEN-VMAMSGHSGAVMEAHF 106
Query: 172 HPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK 212
P + + S D+T+ WDI+ +++ G G V S++
Sbjct: 107 TPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQ 147
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 149 (57.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D IK+W+ TL GH+ +R +P++ S +D+ ++ W ++ I
Sbjct: 184 DRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHY 243
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
GH V + HPT D++V+A D RVWD+ + +V G V S+
Sbjct: 244 HGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASL 295
Score = 148 (57.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ +G + R+ P LF G+D +K W+ + K I GHL + H
Sbjct: 205 IATVRGLAVSPRH-PYLFSC----GEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTL 259
Query: 134 PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+++A D R+W ++R + VL+GH V D VV+ S+D TIR+WD++
Sbjct: 260 DVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLA 319
Query: 194 GLRKKNVAPGMGKLVLSMKSKHP 216
+ K V ++ S HP
Sbjct: 320 AGKTLTTLTHHKKTVRAL-SLHP 341
Score = 139 (54.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 46/194 (23%), Positives = 74/194 (38%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG- 70
V+ + P W + + I++WD L H VRG+ + P S G
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 71 -KMI----------VMAYQGC---ILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFT 116
KM+ + Y G + + P L + G D +VW+ + R+ +
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTL-DVLVTAGRDAVARVWDMRTRQNVHV 284
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH + + P +++ S D TIR+W + + LT H V HP +
Sbjct: 285 LSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEF 344
Query: 177 IVVSASLDQTIRVW 190
S S D I+ W
Sbjct: 345 TFASGSSDN-IKHW 357
Score = 42 (19.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 328 HKYEEVLHIVRNSRLVGEVG 347
HKY+E+ +V+ L E G
Sbjct: 404 HKYQELQSVVQPGSLDSEAG 423
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 142 (55.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
I +++ K + TL GH IR+ F + +++ASDD I+I+ Q + L+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH 231
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+V+ F P D VS+S D++++VWD+S
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVS 262
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD IK+++ + TL GH ++ F + +S+S D+++++W +R C+
Sbjct: 210 DDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHT 269
Query: 159 LTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
H V +++ +VS DQ I V+D
Sbjct: 270 FLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 22/93 (23%), Positives = 47/93 (50%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D +K+W+ +++ CI T GH + F + W++S +D +++W + +
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
H + FHP + ++ + S D+T++ WD+
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G+D+K+ +W + I +L GH I + F + + + TI++W + +
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVR 95
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKK 198
LTGH + FHP + S SLD +++WDI RKK
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI---RKK 133
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+ ++ K + TL GH + FH + S S D ++IW + + CI GH
Sbjct: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
V +F P VVS D ++VWD++
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 148 (57.2 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
W K + TL+GH D +RT + + ++S S D +IRIW + C+ L GH+
Sbjct: 493 WE-KNPYFVHTLIGHTDSVRTISGYGDI--LVSGSYDSSIRIWRVSTGECLYHLRGHSLR 549
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
+ + P +I +S S+D++IRVWD+S K V G
Sbjct: 550 IYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEG 587
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++W +C++ L GH I + + E +S S D++IR+W + C VL
Sbjct: 526 DSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVL 585
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKS-KHPI 217
GH+ +V + ++S S D TIR+WD++ + V P + S S +H I
Sbjct: 586 EGHDAFVTLLNVF--QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKI 642
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 58/211 (27%), Positives = 101/211 (47%)
Query: 86 NEPCLFRIKSVLGDDY-KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQT 144
N P LFR + L +++ K + N++ H + + F + W++S S D+T
Sbjct: 291 NWPYLFRQRRRLEENWTKGRFTNFQLPHPAHMEEAHQECVYAIQFIGK--WLVSGSRDKT 348
Query: 145 IRIWYWQSRNCIC-VLTGHNHYVMCAQFHPT--DDIVVSASLDQTIRVWDIS-GLRKKNV 200
+R+W ++ L GH V+C QF+P+ +DI++S S D+ + VW S G + +
Sbjct: 349 VRVWDLNTKRLWHRPLIGHTKSVLCLQFNPSPSEDIIISGSSDKNVIVWRFSTGEKIHEI 408
Query: 201 APGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRK-MEPLCNIHENTRVKSGAWDE 259
AP VL+++ H +Y + C+ + I NRK + P + + SG
Sbjct: 409 APAHDDSVLNLRFDH---RY---LVTCSKDKLIKIWNRKNLSPADKDYPSVHQGSGVSYP 462
Query: 260 SGVFIYTTS---NHIKYAIVNGDHGIIRTLD 287
S +I TS + + A + +H IRTL+
Sbjct: 463 S--YIVDTSVIPSPVLEAEIAKNH--IRTLE 489
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/201 (22%), Positives = 88/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E + RV +++HP ++ ++ ++ +LWD + + H V I FH +
Sbjct: 319 EGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 66 FVSGGK------------MIVMAYQGCILESRN---EPCLFRIKSVLGDDYKIKVWNYKQ 110
+GG +M +G + E P + I + GD+ KVW+ +Q
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDN-TCKVWDLRQ 437
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R+C++T+ H + + F + ++L+ + D T +IW + + L GH VM
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
++ + S D+T ++W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 128 (50.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+VW+ + +CI L GHL I F I + S D T ++W + R C+ + H
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 164 HYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV-LSMKSKHPIWKY 220
+ V +F P + +++ + D T ++W G K +A GK++ L + S +
Sbjct: 449 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
Query: 221 C 221
C
Sbjct: 509 C 509
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
F P + ++ +G+ +LW LL H V I FH + +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTV 286
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D I++W+ ++ +C +GH + + + ++S S D+TI+IW NC +
Sbjct: 84 DKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTI 142
Query: 160 T--GHNHYVMCAQFHPTDDIV--VSASLDQTIRVWDI 192
T GH+ +V C +F P D + VSA D+ ++VWD+
Sbjct: 143 TDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 117 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD 176
L GH ++ + + LSAS D+TIR+W + C GH V+ P +
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 177 IVVSASLDQTIRVWDISGLRKKNVAPG 203
VVS S D+TI++W+I G K + G
Sbjct: 119 QVVSGSRDKTIKIWNIIGNCKYTITDG 145
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 23 WILSSLHNGVI--QLWDYRMNTLLEKFDEHEGPVRG--ICFHNQQPIFVSG---GKMIVM 75
W L GV+ +LWD ++ D GPV + F +G GK+ +
Sbjct: 58 WSLEGHQLGVVSVRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTHVGKVNIF 115
Query: 76 AYQG----CILESRNEPCLFRIKSVLGD-------DYKIKVWNYKQRKCIFTLLGHLDYI 124
+ L++R + L S G D I +++ K + TL GH I
Sbjct: 116 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 175
Query: 125 RTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLD 184
R+ F + +++ASDD I+I+ Q N L+GH +V+ F P D VS+S D
Sbjct: 176 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 235
Query: 185 QTIRVWDISGLR 196
++++VWD+ G R
Sbjct: 236 KSVKVWDV-GTR 246
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 99 DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV 158
DD +K+WN+ K L GH +++ +H E I SAS D +++W +S NCI
Sbjct: 197 DDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISS 256
Query: 159 LTGHNHYVMCAQFHPTD-DIVVSASLDQTIRVWDI 192
+ H V+ +F PT +++++ S D++ RV+DI
Sbjct: 257 ILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDI 291
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 96 VLGD-DYKIKVW--NYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQS 152
+ GD D IK+W N+ K I H + IR F ++ SDD ++IW + +
Sbjct: 151 ISGDADGMIKIWQPNFSMVKEIDA--AHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSN 208
Query: 153 RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS-M 211
VL+GH+ V +HP ++ SAS D +++WD P G + S +
Sbjct: 209 GKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWD----------PRSGNCISSIL 258
Query: 212 KSKHPIWK 219
K KH + K
Sbjct: 259 KFKHTVLK 266
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW--YWQSRNCIC 157
D ++++W+ + +GH + + F + I+SAS D+TI++W + + I
Sbjct: 84 DGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTIS 143
Query: 158 VLTGHNHYVMCAQFHPTDDI--VVSASLDQTIRVWDISGLRKKNVAPG 203
GH +V C +F P + +VSAS D+T++VW++ + +N G
Sbjct: 144 EADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 100 DYKIKVWNYKQRKCIFTLL---GHLDYIRTTFFHHE--YPWILSASDDQTIRIWYWQSRN 154
D IK+WN +C +T+ GH +++ F P I+SAS D+T+++W Q+
Sbjct: 126 DRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
L GH+ Y+ P + S D I +WD++ KK + G ++ S+
Sbjct: 185 LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE-GKKLYSLEAGSIIHSL 240
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/201 (22%), Positives = 87/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E + RV + +HP ++ ++ ++ +LWD + + H V I FH +
Sbjct: 319 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 66 FVSGGK------------MIVMAYQGCILESRN---EPCLFRIKSVLGDDYKIKVWNYKQ 110
+GG +M +G + E P + I + GD+ KVW+ +Q
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDN-TCKVWDLRQ 437
Query: 111 RKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R+C++T+ H + + F + ++L+ + D T +IW + + L GH VM
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
++ + S D+T ++W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 134 (52.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+VW+ + +CI L GHL I F I + S D T ++W + R C+ + H
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 164 HYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV-LSMKSKHPIWKY 220
+ V +F P D +++ + D T ++W G K +A GK++ L + S +
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
Query: 221 C 221
C
Sbjct: 509 C 509
Score = 51 (23.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
F P + ++ +G+ +LW +LL H V I FH + +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTV 286
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 45/201 (22%), Positives = 87/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E + RV + +HP ++ ++ ++ +LWD + + H V I FH +
Sbjct: 319 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 378
Query: 66 FVSGGK------------MIVMAYQGCILESRN---EPCLFRIKSVLGDDYKIKVWNYKQ 110
+GG +M +G + E P + I + GD+ KVW+ +Q
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDN-TCKVWDLRQ 437
Query: 111 RKCIFTLLGHLDYIRTTFFHHEY-PWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R+C++T+ H + + F + ++L+ + D T +IW + + L GH VM
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
++ + S D+T ++W
Sbjct: 498 DISSDGQLIATCSYDRTFKLW 518
Score = 133 (51.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+VW+ + +CI L GHL I F I + S D T ++W + R C+ + H
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 164 HYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV-LSMKSKHPIWKY 220
+ V +F P D +++ + D T ++W G K +A GK++ L + S +
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508
Query: 221 C 221
C
Sbjct: 509 C 509
Score = 51 (23.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
F P + ++ +G+ +LW +LL H V I FH + +
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTV 286
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 127 (49.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL-LGHLDYIRTTFFH 130
M++ A CI SR+ L S+ D KIKVW + C+ H + F
Sbjct: 261 MMMDAAVRCISFSRDSEML-ATGSI---DGKIKVWKVETGDCLRRFDRAHTKGVCAVRFS 316
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ ILS +D +R+ +S C+ + GH+ Y+ ++ + ++S S D +IRVW
Sbjct: 317 KDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Query: 191 DISGLRKKNVAP-GMGKLVLSMKSKHPIWKYCKP-VKYCNPKHTLHICN 237
G + ++ +G + + PI K P + CN +TL++ N
Sbjct: 377 H--GKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNTLYVVN 423
Score = 118 (46.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G+D+ ++V K KC+ + GH YI + E I+S S D +IR+W+ +S C+
Sbjct: 326 GNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECLS 385
Query: 158 VL-TGHNHY-----VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM---GKLV 208
G Y + + P IV + S T+ V +ISG + + G G +
Sbjct: 386 TFRVGSEDYPILNVIPIPKSDPPQMIVCNRS--NTLYVVNISGQVVRTMTSGKREKGDFI 443
Query: 209 LSMKSKHPIWKYC---KPVKYC 227
+ S W Y V YC
Sbjct: 444 NCILSPKGEWAYAIAEDGVMYC 465
Score = 64 (27.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK 46
KF TKS + F P +++S +G I++W+Y MN L K
Sbjct: 210 KFSTKSYPESAV-FSPDANYLVSGSKDGFIEVWNY-MNGKLRK 250
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 148 (57.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
K + +L GHLD I + +LS+S D+T+R+W +++ C+ L HN YV C QF
Sbjct: 497 KPVCSLKGHLDAILDLSWSKSQ-LLLSSSMDKTVRLWDIETKTCL-KLFAHNDYVTCIQF 554
Query: 172 HPTDD-IVVSASLDQTIRVWDI 192
P D+ +S SLD IR+W I
Sbjct: 555 SPVDENYFLSGSLDAKIRIWSI 576
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 88 PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI 147
PC S D ++W++ + + GHL + FH ++ + S D+T+R+
Sbjct: 394 PCSLYFASA-SHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 148 WYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNV 200
W Q N + + TGH V+ F P + SA DQ +++WD+ SG K +
Sbjct: 453 WSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL 506
Score = 142 (55.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/180 (23%), Positives = 75/180 (41%)
Query: 21 RPWILSSLHNGVIQ------LWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
R W L S N V+ +WD ++ +L H+ R F P+ + G +
Sbjct: 367 RYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHL 426
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
+ + C+ N L + D +++W+ +Q + GH + F
Sbjct: 427 LDV---DCVKFHPNSNYL----ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPN 479
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ SA +DQ +++W S L GH + F P ++ SAS+D ++RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC-I 156
G D ++VW+ + I L GH + IR F+ +++ SDD T+R+W +S+N I
Sbjct: 436 GSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNV--LVTGSDDTTVRVWDLRSKNSNI 493
Query: 157 CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
L GHN V C Q+ T +++ S DQ++R W+++
Sbjct: 494 STLRGHNGSVRCLQWDGTT--LITGSNDQSVRWWNLN 528
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D KVW+ K +KC FTL GH I+ ++ + + S D +IRIW + +L
Sbjct: 252 DKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNI--MATGSLDNSIRIWDLEKGKSKGIL 309
Query: 160 T--GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
T HN V C Q D ++S S D T++VW+I+
Sbjct: 310 TTRAHNFDVFCLQ--QIGDQIISGSSDSTVKVWNIA 343
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/191 (24%), Positives = 77/191 (40%)
Query: 21 RPWILSSLHNGVIQ------LWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
R W L S N V+ +WD ++ +L H+ R F P+ + G +
Sbjct: 363 RYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHL 422
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
A C+ N L + D +++W+ +Q + GH + + F
Sbjct: 423 ---ADVDCVKFHPNSNYL----ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPN 475
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ SA +DQ +++W S L GH + F P +V SAS+D ++RVWDI
Sbjct: 476 GKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Query: 193 SGLRKKNVAPG 203
A G
Sbjct: 536 RSSHCSTPADG 546
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/180 (24%), Positives = 75/180 (41%)
Query: 21 RPWILSSLHNGVIQ------LWDYRMN--TLLEKFDEHEGPVRGICFHNQQPIFVSGGKM 72
R W L S N V+ +WD ++ +L H+ R F P+ + G +
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHL 426
Query: 73 IVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHE 132
A C+ N L + D +++W+ +Q + GH + + F
Sbjct: 427 ---ADVDCVKFHPNSNYL----ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPN 479
Query: 133 YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
++ SA +DQ +++W S L GH + F P ++ SAS+D ++RVWDI
Sbjct: 480 GKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
D ++W++ + + GHL + FH ++ + S D+T+R+W Q N + +
Sbjct: 405 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLF 464
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
TGH V+ F P + SA DQ +++WD++
Sbjct: 465 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/201 (22%), Positives = 87/201 (43%)
Query: 6 ETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
E + RV + +HP ++ ++ ++ +LWD + + H V I FH +
Sbjct: 320 EGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSL 379
Query: 66 FVSGGK------------MIVMAYQGCILESRN---EPCLFRIKSVLGDDYKIKVWNYKQ 110
+GG +M +G + E P + I + GD+ KVW+ +Q
Sbjct: 380 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDN-TCKVWDLRQ 438
Query: 111 RKCIFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R+C++T+ H + + F + ++L+ + D T +IW + + L GH VM
Sbjct: 439 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 498
Query: 170 QFHPTDDIVVSASLDQTIRVW 190
++ + S D+T ++W
Sbjct: 499 DISSDGQLIATCSYDRTFKLW 519
Score = 128 (50.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
+VW+ + +CI L GHL I F I + S D T ++W + R C+ + H
Sbjct: 390 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 449
Query: 164 HYVMCAQFHPTD-DIVVSASLDQTIRVWDISGLRK-KNVAPGMGKLV-LSMKSKHPIWKY 220
+ V +F P + +++ + D T ++W G K +A GK++ L + S +
Sbjct: 450 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 509
Query: 221 C 221
C
Sbjct: 510 C 510
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPI 65
F P + ++ +G+ +LW LL H V I FH + +
Sbjct: 239 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTV 287
WARNING: HSPs involving 303 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 641 631 0.00091 120 3 11 22 0.49 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 553
No. of states in DFA: 621 (66 KB)
Total size of DFA: 379 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.09u 0.14s 58.23t Elapsed: 00:00:04
Total cpu time: 58.18u 0.14s 58.32t Elapsed: 00:00:04
Start: Thu Aug 15 15:44:06 2013 End: Thu Aug 15 15:44:10 2013
WARNINGS ISSUED: 2