RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9327
(641 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 119 bits (298), Expect = 2e-30
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 8/191 (4%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ F V+ + + I S ++ +++W + EH V I +
Sbjct: 135 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWA 194
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGH 120
+ + D IK+W+ C+ TL+GH
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSG--------SRDKTIKMWDVSTGMCLMTLVGH 246
Query: 121 LDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVS 180
+++R FH +ILS +DD+T+R+W ++++ C+ L H H+V FH T VV+
Sbjct: 247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 306
Query: 181 ASLDQTIRVWD 191
S+DQT++VW+
Sbjct: 307 GSVDQTVKVWE 317
Score = 87.1 bits (214), Expect = 2e-19
Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 8/195 (4%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
P I+S+ + I++W+ + ++ F H VR + + + S +
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV- 167
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ + C ++ I I T P++
Sbjct: 168 ---RVWVVATKECKAELREHRHVVECISWAPESSYSSI----SEATGSETKKSGKPGPFL 220
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLR 196
LS S D+TI++W + C+ L GH+++V FH ++S + D+T+RVWD R
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280
Query: 197 KKNVAPGMGKLVLSM 211
V S+
Sbjct: 281 CMKTLNAHEHFVTSL 295
Score = 84.8 bits (208), Expect = 1e-18
Identities = 54/289 (18%), Positives = 103/289 (35%), Gaps = 36/289 (12%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
+ V + FHP ++S+ + I++WDY H V+ I F + + S
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTF 128
+ + W+++ +CI T+ GH + +
Sbjct: 77 CSADMTIKL----------------------------WDFQGFECIRTMHGHDHNVSSVS 108
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
I+SAS D+TI++W Q+ C+ TGH +V + + ++ S S DQT+R
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168
Query: 189 VWDISGLRKKNVAPGMGKLVLSMKSKHP-------IWKYCKPVKYCNPKHTLHICNR-KM 240
VW ++ K +V + + K P L +R K
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 241 EPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLP 289
+ ++ + + ++ V + K+ + D +R D
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 277
Score = 64.0 bits (154), Expect = 1e-11
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 5/167 (2%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K W + + L GH + FH + ++SAS+D TI++W +++ + L GH
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223
V F + ++ S S D TI++WD G G ++ S +
Sbjct: 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVSIMPNGDHI 116
Query: 224 VKYCNPKHTLHICNRKMEPLCNIHENTRV-KSGAWDESGVFIYTTSN 269
V K + + + + ++ G I + SN
Sbjct: 117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 163
Score = 60.9 bits (146), Expect = 1e-10
Identities = 26/125 (20%), Positives = 39/125 (31%)
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
L+GH V FHP ++VSAS D TI+VWD + G V + H
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 71
Query: 218 WKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVN 277
K + + N S + + + IK V
Sbjct: 72 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 278 GDHGI 282
+ +
Sbjct: 132 TGYCV 136
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 102 bits (255), Expect = 2e-24
Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 30/182 (16%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
V LS P +S + +LWD R + F HE + ICF F +G
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS- 245
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY--IRTTFF 129
DD ++++ + + + T I + F
Sbjct: 246 ---------------------------DDATCRLFDLRADQELMTYSHDNIICGITSVSF 278
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+L+ DD +W + VL GH++ V C V + S D +++
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 190 WD 191
W+
Sbjct: 339 WN 340
Score = 81.3 bits (199), Expect = 3e-17
Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 17/199 (8%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
A++ + + ++S+ +G + +WD + V +
Sbjct: 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 69 GGKMIVMAYQGCILESRNEPCLFRIKSVLGD-----------------DYKIKVWNYKQR 111
GG + + N + G D +W+ +
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG 174
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQF 171
+ T GH + + + +S + D + ++W + C TGH + F
Sbjct: 175 QQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234
Query: 172 HPTDDIVVSASLDQTIRVW 190
P + + S D T R++
Sbjct: 235 FPNGNAFATGSDDATCRLF 253
Score = 56.3 bits (134), Expect = 5e-09
Identities = 22/138 (15%), Positives = 42/138 (30%)
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
Q + TL GHL I + + ++SAS D + IW + N + + + +VM
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNP 229
+ P+ + V LD ++++ S + V
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163
Query: 230 KHTLHICNRKMEPLCNIH 247
+
Sbjct: 164 TTCALWDIETGQQTTTFT 181
Score = 55.9 bits (133), Expect = 6e-09
Identities = 30/269 (11%), Positives = 72/269 (26%), Gaps = 32/269 (11%)
Query: 50 HEGPVRGICFHNQQPIFVSGGK----MIVMAYQG--------------CILESRNEPCLF 91
H + + + + VS + +I +Y + + +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113
Query: 92 RIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQ 151
+ L GH + + I+++S D T +W +
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGH-TGYLSCCRFLDDNQIVTSSGDTTCALWDIE 172
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM------- 204
+ TGH VM P + VS + D + ++WD+ + G
Sbjct: 173 TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAI 232
Query: 205 -----GKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDE 259
G + + ++ + + + +G D
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292
Query: 260 SGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288
+ ++ + ++ G + L +
Sbjct: 293 N-CNVWDALKADRAGVLAGHDNRVSCLGV 320
Score = 42.4 bits (98), Expect = 1e-04
Identities = 13/82 (15%), Positives = 22/82 (26%)
Query: 150 WQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209
L GH + + ++VSAS D + +WD K + P V+
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 210 SMKSKHPIWKYCKPVKYCNPKH 231
+
Sbjct: 102 TCAYAPSGNYVACGGLDNICSI 123
Score = 32.0 bits (71), Expect = 0.23
Identities = 4/36 (11%), Positives = 11/36 (30%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD 37
RV L + + + +++W+
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 90.2 bits (222), Expect = 5e-20
Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 29/189 (15%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE-------HEGPVRGICFHNQQPIFVSG 69
+I + + +++WD L+E+ D H+ V + F VSG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
++ ++ + K C T +GH D++ +
Sbjct: 273 S----------------LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC------AQFHPTDDIVVSASL 183
+ILS S D+ + W +S N + +L GH + V+ + P ++ + S
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG 376
Query: 184 DQTIRVWDI 192
D R+W
Sbjct: 377 DCKARIWKY 385
Score = 72.5 bits (176), Expect = 3e-14
Identities = 40/318 (12%), Positives = 96/318 (30%), Gaps = 61/318 (19%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDE------------------H 50
++ V + F ++ + N Q++ +L+ + +
Sbjct: 62 TSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120
Query: 51 EGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG------------ 98
+ +R +CF +G + ++ + +
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 99 --DDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI 156
D +++W+ + +C TL + +I + S D+ +R+W ++ +
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 157 CVL-------TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVL 209
L TGH V F VVS SLD+++++W++ K
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK----------- 289
Query: 210 SMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269
K + T + + + + SG+ D V + +
Sbjct: 290 ---------SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKS 339
Query: 270 HIKYAIVNGDHGIIRTLD 287
++ G + ++
Sbjct: 340 GNPLLMLQGHRNSVISVA 357
Score = 50.6 bits (119), Expect = 3e-07
Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 21/277 (7%)
Query: 15 LSFHPKR-PWILSSLHNGVIQLWD----YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
L + P L N L++ ++ L K +H V + F N +G
Sbjct: 21 LDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + R+ + + N + YIR+ F
Sbjct: 81 CNKTTQ-----VYRVSDGSLVARLSDDSAANKDPENLN------TSSSPSSDLYIRSVCF 129
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ ++ + ++D+ IRIW ++R + +L GH + + P+ D +VS S D+T+R+
Sbjct: 130 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189
Query: 190 WDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC-----KPVKYCNPKHTLHICNRKMEPLC 244
WD+ + + S + V+ + + + E
Sbjct: 190 WDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES 249
Query: 245 NIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281
V S + G + + S + N +
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286
Score = 49.4 bits (116), Expect = 8e-07
Identities = 15/110 (13%), Positives = 27/110 (24%), Gaps = 22/110 (20%)
Query: 1 MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH 60
+ V ++ +ILS + + WD + L H V +
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 359
Query: 61 NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQ 110
N + D K ++W YK+
Sbjct: 360 NGSS-LGPEYNVFATG---------------------SGDCKARIWKYKK 387
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 84.5 bits (207), Expect = 2e-18
Identities = 47/259 (18%), Positives = 88/259 (33%), Gaps = 17/259 (6%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
I+S + +++W L H G V + I S + + +
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 76 AYQGCI----------LESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR 125
R + D ++VW+ + +C+ L+GH+ +R
Sbjct: 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
++ ++S + D +++W ++ C+ L GH + V QF VVS SLD
Sbjct: 142 --CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDT 197
Query: 186 TIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI---WKYCKPVKYCNPKHTLHICNRKMEP 242
+IRVWD+ + G L M+ K I VK + K + +
Sbjct: 198 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPN 257
Query: 243 LCNIHENTRVKSGAWDESG 261
+ + +
Sbjct: 258 KHQSAVTCLQFNKNFVITS 276
Score = 72.5 bits (176), Expect = 2e-14
Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 20/197 (10%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
++S ++ ++++WD T L H V + F + S I +
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW 202
Query: 77 YQGCILESRNEPCLFRIKSVL----------GDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
+ S + D +K+W+ K +C+ TL G +
Sbjct: 203 DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 262
Query: 127 TFFHHEYP-WILSASDDQTIRIWYWQSRNCICVLT-----GHNHYVMCAQFHPTDDIVVS 180
+++++SDD T+++W ++ I L G V + T +
Sbjct: 263 VTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322
Query: 181 ASLDQT----IRVWDIS 193
S + T + V D
Sbjct: 323 GSRNGTEETKLLVLDFD 339
Score = 65.6 bits (158), Expect = 4e-12
Identities = 28/209 (13%), Positives = 60/209 (28%), Gaps = 21/209 (10%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
W + K L GH D++ T I+S SDD T+++W + C+ L GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225
V +Q I S + + + H ++ + V+
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAET------------------GECIHTLYGHTSTVR 101
Query: 226 YCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRT 285
+ + + L T + + + +++
Sbjct: 102 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 161
Query: 286 LDLPIY--ITKIKGNQVYYLDRECSPHVL 312
D + ++G+ + +
Sbjct: 162 WDPETETCLHTLQGHTNRVYSLQFDGIHV 190
Score = 53.3 bits (126), Expect = 4e-08
Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 10/172 (5%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
DD +KVW+ KC+ TL+GH + ++ + W + C
Sbjct: 34 SDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS----GSTDRTLKVWNAETGEC 89
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPI 217
+ T + H H + VVS S D T+RVWDI + +V G V +
Sbjct: 90 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV------ 143
Query: 218 WKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSN 269
+ V + + + + E + + + + G+ + + S
Sbjct: 144 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 79.9 bits (195), Expect = 4e-17
Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 18/218 (8%)
Query: 1 MLTKFETKSARVKG-LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICF 59
L + +S KG I+S L + I++WD H G V + +
Sbjct: 4 SLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 60 HNQQPIFVSGGKMIVMAY----------QGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
+ I S + + + + D I VW+
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 110 QRKCIFT---LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYV 166
I L+GH + F +Y SAS D+TI++W + + L GH +
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 167 MCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204
C Q+ +VVS S D TIR+WDI V G
Sbjct: 182 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGH 217
Score = 71.8 bits (174), Expect = 2e-14
Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 26/197 (13%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEK---FDEHEGPVRGICFHNQQPIFVSGGKMI 73
+++ + I +WD T + H V + F ++ + SG + I
Sbjct: 101 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 160
Query: 74 ----------VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
V G R+ D I++W+ + C+ L GH
Sbjct: 161 KVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH--E 218
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRN---------CICVLTGHNHYVMCAQFHPT 174
+ I+S + D I++W + C+ L H+ V QF
Sbjct: 219 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF 278
Query: 175 DDIVVSASLDQTIRVWD 191
+VS+S D TI +WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
Score = 49.8 bits (117), Expect = 4e-07
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 111 RKCIFTLLGHLDYIRT-TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
R + + + + ++ I+S D TI+IW + C +LTGH V+C
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 170 QFHP 173
Q+
Sbjct: 62 QYDE 65
Score = 47.9 bits (112), Expect = 1e-06
Identities = 26/231 (11%), Positives = 58/231 (25%), Gaps = 36/231 (15%)
Query: 44 LEKFDEHEGPVRGI-CFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102
L++ +G+ C VSG D
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGL----------------------------RDNT 36
Query: 103 IKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGH 162
IK+W+ +C L GH + + S+ + +
Sbjct: 37 IKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 96
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222
+ D++I VWD++ ++ + +
Sbjct: 97 AVLHLRFNNGMMVTCSK----DRSIAVWDMA--SPTDITLRRVLVGHRAAVNVVDFDDKY 150
Query: 223 PVKYCNPKHTLHICNRKMEPLCNIHENTR-VKSGAWDESGVFIYTTSNHIK 272
V + E + ++ + R + + + V ++ N I+
Sbjct: 151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 201
Score = 27.1 bits (58), Expect = 7.6
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWD 37
L S RV L F I+SS H+ I +WD
Sbjct: 260 LRTLVEHSGRVFRLQFDEF--QIVSSSHDDTILIWD 293
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 71.4 bits (173), Expect = 5e-14
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 1/87 (1%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ + + L H + + F + W +S D + W I + +
Sbjct: 250 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS 308
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDI 192
V+ D +V+ S D+ V+++
Sbjct: 309 VLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 54.8 bits (130), Expect = 1e-08
Identities = 16/179 (8%), Positives = 44/179 (24%), Gaps = 7/179 (3%)
Query: 97 LGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-----YWQ 151
D I + + I TL H + + + + + +++W +
Sbjct: 28 FPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPGNK 85
Query: 152 SRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSM 211
S ++Y+ + P ++ T+ +WD++ + A
Sbjct: 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145
Query: 212 KSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270
+ + + + G ++T
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204
Score = 50.6 bits (119), Expect = 3e-07
Identities = 27/271 (9%), Positives = 57/271 (21%), Gaps = 72/271 (26%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMN-----TLLEKFDEHEGPVRGICFHNQQ 63
V ++ + + G +++WD + +R
Sbjct: 51 GEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 64 PIFVSGGK----------------MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107
+ GG+ + + ++ D I VW+
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 108 YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT------- 160
+ + GH D ++ + + D T+R W + +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229
Query: 161 ---------------------------------GHNHYVMCAQFHPTDDIVVSASLDQTI 187
H V+ +F VS D +
Sbjct: 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289
Query: 188 RVWDISGLRKKNVAPGMGKLVLSMKSKHPIW 218
W G + K +
Sbjct: 290 NAWRTP----------YGASIFQSKESSSVL 310
Score = 37.9 bits (86), Expect = 0.003
Identities = 26/227 (11%), Positives = 52/227 (22%), Gaps = 35/227 (15%)
Query: 49 EHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN- 107
H V + N +GG +KVW+
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-----------------------------KGCVKVWDI 79
Query: 108 ----YKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K L +YIR+ + ++ + T+ IW + +
Sbjct: 80 SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS 139
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKP 223
C + D V S + + L + + K
Sbjct: 140 SAPACYALAISPDSKVCFS-CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198
Query: 224 VKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNH 270
R+ L +++ S + +G ++
Sbjct: 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMES 245
Score = 28.2 bits (61), Expect = 2.9
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWD 37
S+ V +I++ + +++
Sbjct: 306 SSSVLSCDISVDDKYIVTGSGDKKATVYE 334
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 70.7 bits (171), Expect = 1e-13
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 8/194 (4%)
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICV--LTGHNHYVMCAQFHPTDDI 177
++ I ++ + I ++ + I+ + V L HN V + P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237
+V+ D+ VW + G K + ++ P + +
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVIL------RINRAARCVRWAPNEKKFAVGSGSRVI 119
Query: 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKG 297
S V + R I + +
Sbjct: 120 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 179
Query: 298 NQVYYLDRECSPHV 311
+ + +
Sbjct: 180 APTPWGSKMPFGEL 193
Score = 63.7 bits (153), Expect = 2e-11
Identities = 21/198 (10%), Positives = 49/198 (24%), Gaps = 34/198 (17%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+ + V G+ F + H+ + L D + P+ + F +
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
+ +G D ++ Y + G LD
Sbjct: 256 SLVAAGH-----------------------------DCFPVLFTYDSAAGKLSFGGRLDV 286
Query: 124 IRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI----VV 179
+ + + D+ + + + H + V
Sbjct: 287 PKQSSQRGLTARERFQNLDKKASSE-GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 345
Query: 180 SASLDQTIRVWDISGLRK 197
+ +D + +WD+ L
Sbjct: 346 TTGMDGGMSIWDVRSLES 363
Score = 63.7 bits (153), Expect = 2e-11
Identities = 40/287 (13%), Positives = 80/287 (27%), Gaps = 42/287 (14%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNT--LLEKFDEHEGPVRGICFHNQQPIFVSG 69
+ +++ R I +N + +++ N + + EH G V G+ + V+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR--KCIFTLLGHLDYIRTT 127
G D VW K R K +L R
Sbjct: 70 ----------------------------GTDRNAYVWTLKGRTWKPTLVILRINRAARCV 101
Query: 128 FFHHEYPWILSASDDQTIRIWYWQSRN----CICVLTGHNHYVMCAQFHPTDDIVVSASL 183
+ S + I I Y++ N C + V+ +HP ++ + S
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161
Query: 184 DQTIRVWDISG--LRKKNVAPGMGKLVLSMKSKHPIWKYCKPV----KYCNPKHTLHICN 237
D R++ + ++ G + + C V N + +
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 238 RKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIR 284
L + + V + A + + T D +
Sbjct: 222 DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVL 268
Score = 54.1 bits (128), Expect = 2e-08
Identities = 29/287 (10%), Positives = 76/287 (26%), Gaps = 41/287 (14%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ + + + +V G+ + P I++ + +W + T C
Sbjct: 44 VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 103
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNE--------------------PCLFRIKSVLGDDY 101
C E N+ + + D+
Sbjct: 104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163
Query: 102 KIKVWNYKQRK------------------CIFTLLGHLDYIRTTFFHHEYPWILSASDDQ 143
K ++++ ++ +F ++ F + S D
Sbjct: 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 223
Query: 144 TIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPG 203
T+ + + + L ++ F +V + D ++ K
Sbjct: 224 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFG- 281
Query: 204 MGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENT 250
G+L + +S + + + K + L ++H+N+
Sbjct: 282 -GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS 327
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 66.4 bits (160), Expect = 2e-12
Identities = 22/295 (7%), Positives = 76/295 (25%), Gaps = 40/295 (13%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTL---LEKFDEHEGPVRGICFHNQQPIFVS 68
+ + P + +L + +G + ++ + + L + ++ P+ F + + +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 69 GG----------------KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRK 112
G + + + R D I+V + +
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 113 CIFTLLGHLDYIRTTFFHHEYPW------ILSASDDQTIRIWYWQSRNCI----CVLTGH 162
+ +L+ T + + ++ ++ ++ +
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 163 NHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCK 222
A + +S+D + V S + +
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFD--------DQGDDYNSSKRFAFRCHRLNL 245
Query: 223 PVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWD-ESGVFIYTTSNHIKYAIV 276
+ + + L + + W+ ++ I + + ++V
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS--CWNLQTRKKIKNFAKFNEDSVV 298
Score = 62.6 bits (150), Expect = 4e-11
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 104 KVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHN 163
K + ++ + + + F + ++ +A D I W Q+R I
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF- 292
Query: 164 HYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
+ + +D+I+ A+ D T +
Sbjct: 293 NEDSVVKIACSDNILCLATSDDTFKTNAAID 323
Score = 59.1 bits (141), Expect = 5e-10
Identities = 16/150 (10%), Positives = 39/150 (26%), Gaps = 4/150 (2%)
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL---TGHNHYVMC 168
+ + DYI +L S D ++ ++ + + L + H ++C
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 169 AQFHPTDD-IVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYC 227
F D + ++ I D+ G + + +
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 228 NPKHTLHICNRKMEPLCNIHENTRVKSGAW 257
+ N + + N+
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151
Score = 39.4 bits (90), Expect = 0.001
Identities = 12/249 (4%), Positives = 45/249 (18%), Gaps = 31/249 (12%)
Query: 43 LLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYK 102
+++ + + I + + + D
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITS----------------------------WDGS 34
Query: 103 IKVWNYKQRKCIFTL---LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
+ V+ + + L L + + F + Q + +
Sbjct: 35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA 94
Query: 160 TGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWK 219
+N + + + I + + L +
Sbjct: 95 LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIF 154
Query: 220 YCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGD 279
+ + +N ++ + + +
Sbjct: 155 TMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214
Query: 280 HGIIRTLDL 288
G +
Sbjct: 215 DGRVAVEFF 223
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 66.1 bits (159), Expect = 3e-12
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 3/119 (2%)
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ + S + + + K I + +
Sbjct: 207 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKF 266
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ---FHPTDDIVVSASLDQTIRVWDI 192
+ D TIR+W + C+ T + Q + ++S SLD T+ +++
Sbjct: 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 41.1 bits (94), Expect = 3e-04
Identities = 29/263 (11%), Positives = 71/263 (26%), Gaps = 12/263 (4%)
Query: 7 TKSARVKGLSFHPKRPWILS-SLHNGVIQLWDYRMNTL--LEKFDEHEG-PVRGICFHNQ 62
T+ LS+ P I + ++ D + + + +F H V + F
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 63 QP--IFVSG---GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
+ SG GK+IV + + E + VL W+++ R+
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDI 177
G ++ + + Q I + + + +T + + P
Sbjct: 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF 194
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICN 237
S + + + + K ++
Sbjct: 195 SASDRTHHKQGSFVRDVEFSPDSGEFVIT---VGSDRKISCFDGKSGEFLKYIEDDQEPV 251
Query: 238 RKMEPLCNIHENTRVKSGAWDES 260
+ + ++ + + D +
Sbjct: 252 QGGIFALSWLDSQKFATVGADAT 274
Score = 40.3 bits (92), Expect = 5e-04
Identities = 25/220 (11%), Positives = 53/220 (24%), Gaps = 34/220 (15%)
Query: 8 KSARVKGLSFHPKRP--WILSSLHNGVIQLWDYR--------MNTLLEKFDEHEGPVRGI 57
S+ V + F P + ++ S +G + +W + + +F GP+ I
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 58 CFH--------------------NQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVL 97
+ + G ++ P
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
G + +K T ++R F + + +
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241
Query: 158 VLTGHNHYVMCAQFHPT----DDIVVSASLDQTIRVWDIS 193
+ + + D TIRVWD++
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 65.3 bits (157), Expect = 4e-12
Identities = 18/177 (10%), Positives = 40/177 (22%), Gaps = 1/177 (0%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
L+ + + + V + G +
Sbjct: 134 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH 193
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ +++ + + H + + + I
Sbjct: 194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI 253
Query: 137 LSASDDQTIRIWYWQSRNCICVLTGHN-HYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
SAS D+TI+IW + + T +VS S + I +
Sbjct: 254 ASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 53.4 bits (126), Expect = 3e-08
Identities = 28/276 (10%), Positives = 59/276 (21%), Gaps = 8/276 (2%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIF 66
T L P I V T E + EH
Sbjct: 15 TARGTAVVLGNTPAGDKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC 73
Query: 67 VSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
SG + I G I + +R
Sbjct: 74 ASGDVH--GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 131
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
F L+ + + SR + ++ V + P +
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191
Query: 187 IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNI 246
+ + + G ++ + + + + L
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV----FEDDSLKNVAHSGSVFGLTWS 247
Query: 247 HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGI 282
+ T++ S + D++ + I+ + + I
Sbjct: 248 PDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRI 282
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 65.0 bits (156), Expect = 4e-12
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 2/120 (1%)
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEY 133
+ + + + L + I + E
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227
Query: 134 PWILSASDDQTIRIWYWQS-RNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+ + S D I I+ + I L H V + +VS+ D I+ W++
Sbjct: 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWNV 286
Score = 47.6 bits (111), Expect = 2e-06
Identities = 14/142 (9%), Positives = 31/142 (21%), Gaps = 13/142 (9%)
Query: 110 QRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCA 169
+ + T+ GH I + ++S S D I W S + H++ ++
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSL 52
Query: 170 QFHPTDDIVVSASLDQTIRVWDISGLRKKN----VAPGMGKLVLSMKSKHPIWKYCKPVK 225
+ + D A G + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 226 YCNPKHTLHICNRKMEPLCNIH 247
+ +
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVA 134
Score = 45.7 bits (106), Expect = 9e-06
Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 10/129 (7%)
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMK-S 213
+ ++GHN + +P ++S S D I W S + + L++S+ S
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNS 55
Query: 214 KHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKY 273
K + + + + + D+ + + + + I
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 274 AIVNGDHGI 282
++ G
Sbjct: 116 SVRLNSPGS 124
Score = 36.1 bits (81), Expect = 0.009
Identities = 13/185 (7%), Positives = 36/185 (19%), Gaps = 1/185 (0%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
+ + + ++ + + +
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
++ + E L D R +
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIR 188
+L + ++ W R A ++ +V + SLD I
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 189 VWDIS 193
++ +
Sbjct: 241 IYSVK 245
Score = 35.3 bits (79), Expect = 0.015
Identities = 23/248 (9%), Positives = 70/248 (28%), Gaps = 6/248 (2%)
Query: 41 NTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDD 100
+ +L+ H + + + P+ +M + + + + + + +
Sbjct: 3 DEVLKTISGHNKGITALTVN---PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQE 59
Query: 101 YKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT 160
Y W+ + T + +++ + +DD + + + + +
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT---GDIIKS 116
Query: 161 GHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKY 220
+ A + + V TI+V+ +S L + S S P Y
Sbjct: 117 VRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETY 176
Query: 221 CKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280
+ +R+++ +++ + +W +
Sbjct: 177 IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 236
Query: 281 GIIRTLDL 288
I +
Sbjct: 237 TNIFIYSV 244
Score = 33.4 bits (74), Expect = 0.077
Identities = 6/57 (10%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYR-MNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+ + + + I ++ + +++ + H+ V + + VS G
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSG 276
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 64.1 bits (154), Expect = 1e-11
Identities = 26/169 (15%), Positives = 57/169 (33%), Gaps = 1/169 (0%)
Query: 115 FTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPT 174
TL GH+ + T + ++++ +DD+ IR++ ++ + L+GH+ V ++
Sbjct: 6 TTLRGHMTSVITCLQFED-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 175 DDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH 234
+V ++ G + ++ KY N H
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGII 283
+ P + + +E+ F+ H+ HG I
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI 173
Score = 62.6 bits (150), Expect = 5e-11
Identities = 29/294 (9%), Positives = 76/294 (25%), Gaps = 22/294 (7%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG---- 70
L F ++++ + +I+++D L + H+G V + + + +
Sbjct: 19 LQFEDN--YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 71 -----------KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119
+ E + D + VW + +
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 120 HLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179
DY E P+ + + I V +++ ++ + +
Sbjct: 137 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYI 196
Query: 180 SASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLH----- 234
+ I RK+ ++ M + ++ Y
Sbjct: 197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFL 256
Query: 235 ICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288
+ + N + ++ + + TT +V+G +L
Sbjct: 257 VSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL 310
Score = 61.4 bits (147), Expect = 1e-10
Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 6/215 (2%)
Query: 98 GDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC 157
DD I+V++ +K + L GH + + H ++S S D+T+R+W + C
Sbjct: 30 ADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH 88
Query: 158 VLTGHN--HYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKH 215
V GHN + + +V+ S D T+ VW L K++ P G+ H
Sbjct: 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK---LPKESSVPDHGEEHDYPLVFH 145
Query: 216 PIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAI 275
+ V + +Y S H
Sbjct: 146 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 205
Query: 276 VNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPH 310
+ T I+ + + +
Sbjct: 206 STIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240
Score = 54.1 bits (128), Expect = 2e-08
Identities = 11/137 (8%), Positives = 32/137 (23%), Gaps = 2/137 (1%)
Query: 58 CFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
I + + + Y + K ++ + +
Sbjct: 218 SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKF 277
Query: 118 LGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCI-CVLTGHNHYVMCAQFHPTDD 176
H + + IL + + I+ +S + + + F
Sbjct: 278 SYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKG-KT 336
Query: 177 IVVSASLDQTIRVWDIS 193
+V + D + +
Sbjct: 337 LVAAVEKDGQSFLEILD 353
Score = 43.7 bits (101), Expect = 5e-05
Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 47/216 (21%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
+ +I++ + + +W + + E + P FV + + +
Sbjct: 104 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 163
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
+ D + VW+ Q KC++ L GH D I +T + HE
Sbjct: 164 VRTVSGHGNIVVSGSY-------DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC 216
Query: 137 LSASDDQTIRI---------------------------------------WYWQSRNCIC 157
+SAS D TIRI + +
Sbjct: 217 ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK 276
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
H + F+ +D+I+VS S + ++++
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 311
Score = 35.3 bits (79), Expect = 0.018
Identities = 7/61 (11%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEK-FDEHEGPVRGICFHNQQPIFVSGG 70
+ ++ IL S +++ R L+ + + + F + + +
Sbjct: 284 LSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVE 342
Query: 71 K 71
K
Sbjct: 343 K 343
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 61.8 bits (148), Expect = 7e-11
Identities = 12/185 (6%), Positives = 39/185 (21%), Gaps = 32/185 (17%)
Query: 17 FHPKRPWILSSLHNGVIQLWD-------YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
F + + + D + + + G + +G
Sbjct: 186 FDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAG 245
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + + + I L +
Sbjct: 246 EYDL---------------------NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH 284
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ A + + + ++R +T + + + V+ D I
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYT 340
Query: 190 WDISG 194
+ +
Sbjct: 341 FPLEK 345
Score = 48.3 bits (113), Expect = 2e-06
Identities = 19/194 (9%), Positives = 33/194 (17%), Gaps = 14/194 (7%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95
+ F G G + G K+ + + +
Sbjct: 135 ISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY 194
Query: 96 VLGDDYKIKVWNYKQRKCIF-------TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
L + F + T + D
Sbjct: 195 YLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYK 254
Query: 149 YWQSRN-------CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVA 201
N I L A + +D+ + V
Sbjct: 255 RSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK 314
Query: 202 PGMGKLVLSMKSKH 215
+ L LS K
Sbjct: 315 NNLTDLRLSADRKT 328
Score = 43.3 bits (100), Expect = 6e-05
Identities = 11/194 (5%), Positives = 36/194 (18%), Gaps = 6/194 (3%)
Query: 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRN- 154
+ + + + + IR + + + + R
Sbjct: 19 AFVSRGQAFIQDVSGTYVL--KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG 76
Query: 155 CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSK 214
+ V V A+ I D+ + + ++ +
Sbjct: 77 KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF-TI 135
Query: 215 HPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYA 274
++ T + + + + K
Sbjct: 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH--DYAPAFDADSKNL 193
Query: 275 IVNGDHGIIRTLDL 288
+ + D
Sbjct: 194 YYLSYRSLDPSPDR 207
Score = 41.8 bits (96), Expect = 2e-04
Identities = 22/212 (10%), Positives = 40/212 (18%), Gaps = 33/212 (15%)
Query: 7 TKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNT-LLEKFDEHEGPVRGICFHNQQPI 65
+ R++ + L Y T EKF+E+ G V +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 66 FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLG------------------------DDY 101
V + R +
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC------ 155
I V++ + RK + F + + S N
Sbjct: 160 AIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVS 218
Query: 156 -ICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
V+ + P + D
Sbjct: 219 KPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Score = 29.4 bits (64), Expect = 1.4
Identities = 10/106 (9%), Positives = 27/106 (25%), Gaps = 32/106 (30%)
Query: 12 VKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGK 71
+ + GV+ +D + + E + + + K
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSAD-------RK 327
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTL 117
+++ DD KI + ++ + T+
Sbjct: 328 TVMVR---------------------KDDGKIYTFPLEKPEDERTV 352
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 60.4 bits (144), Expect = 2e-10
Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNH- 164
N + + H + + + + + S D ++ +W + ++ H
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA 268
Query: 165 -YVMCAQFHPTDDIVVSASLDQTIRVWDIS 193
+ + + +VSA D I+ W++
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 57.7 bits (137), Expect = 1e-09
Identities = 18/137 (13%), Positives = 34/137 (24%), Gaps = 2/137 (1%)
Query: 112 KCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLT-GHNHYVMCAQ 170
GH I + + SA + I W + V H + +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 171 FHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPK 230
D+ + D ++V G + KL V C
Sbjct: 63 TTSKGDLFTVSW-DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 231 HTLHICNRKMEPLCNIH 247
++ + E + +
Sbjct: 122 IAIYSHGKLTEVPISYN 138
Score = 50.4 bits (118), Expect = 2e-07
Identities = 25/230 (10%), Positives = 50/230 (21%), Gaps = 2/230 (0%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKF-DEHEGPVRGICFHNQQPIFV 67
+ + LS + S+ G I WD F D H + GI ++ +F
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 68 SGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQR-KCIFTLLGHLDYIRT 126
+ + + S + C + + T
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 127 TFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQT 186
++ S+D+ Q +I A +
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 187 IRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHIC 236
+ RK L+ + +P +
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Score = 44.2 bits (102), Expect = 3e-05
Identities = 17/115 (14%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95
+ F R + ++ F + + P R+ +
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 96 VLGDDYKIKVWNYKQRKC--IFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW 148
D + VWN + I H + I+SA D I+ W
Sbjct: 242 G-SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 43.8 bits (101), Expect = 4e-05
Identities = 20/233 (8%), Positives = 46/233 (19%), Gaps = 33/233 (14%)
Query: 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
H + + S + I W+
Sbjct: 11 HNKAITALSSSADGKTLFSAD----------------------------AEGHINSWDIS 42
Query: 110 QRKCIFTLL-GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMC 168
H I + + DD + S +
Sbjct: 43 TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP 102
Query: 169 AQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCN 228
+ D ++ + G + S + ++ +
Sbjct: 103 LGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS----SCVALSNDKQFVAVGGQDS 158
Query: 229 PKHTLHICNRKMEPLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHG 281
H + + + I + S A+ +G F+ T K + +
Sbjct: 159 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN 211
Score = 39.2 bits (89), Expect = 0.001
Identities = 17/181 (9%), Positives = 49/181 (27%), Gaps = 3/181 (1%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
+ + ++++ + + S GK+ +
Sbjct: 74 WDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 133
Query: 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
+ D + H I + F + +
Sbjct: 134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAF 193
Query: 136 ILSASDDQTIRIWYWQSRNCI---CVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDI 192
+++ + + + + + T H V C + P + + + SLD ++ VW++
Sbjct: 194 LVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 253
Query: 193 S 193
+
Sbjct: 254 N 254
Score = 28.8 bits (62), Expect = 1.9
Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 32/94 (34%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNT---LLEKFDEHEGPVRGICFHNQQPIFVSGGKMI 73
+ P + + + + +W+ + ++ K V + + N+ VS G
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET-TIVSAG--- 287
Query: 74 VMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWN 107
D IK WN
Sbjct: 288 -------------------------QDSNIKFWN 296
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 59.1 bits (141), Expect = 6e-10
Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 14/213 (6%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHN 61
+ T S + + I + +NG +Q+ + L F+ +
Sbjct: 177 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 62 QQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHL 121
G + + F + + H
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFG------ERIGSLSVPTHSSQASLGEFAHS 289
Query: 122 DYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQ----FHPTDDI 177
++ + F+ + SA D +R W +++ I L H + + D
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 349
Query: 178 VVSASLDQTIRVWDISGLRKKNVAPGMGKLVLS 210
+ + V + + + + + +
Sbjct: 350 LAEPGVF---DVKFLKKGWRSGMGADLNESLCC 379
Score = 56.8 bits (135), Expect = 4e-09
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 16/114 (14%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNC----ICVLTGHNHYVMC------ 168
H I + + + +S S D +++W + + + H
Sbjct: 12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 169 ---AQFHPTDDIVVSASLDQTIRVWDI-SGLRKKNVAPGMGKLVLSMKSKHPIW 218
+ +V + S + + I K V L+ S KH W
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123
Score = 54.1 bits (128), Expect = 3e-08
Identities = 17/178 (9%), Positives = 40/178 (22%), Gaps = 58/178 (32%)
Query: 50 HEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYK 109
H+ + + N VS D +KVW+ K
Sbjct: 13 HDADIFSVSACNSF--TVSCS----------------------------GDGYLKVWDNK 42
Query: 110 QRKCIFTL------------LGHLDYIRTT-FFHHEYPWILSASDDQTIRIWYWQSRNCI 156
L H+D ++ E + + S + + +
Sbjct: 43 LLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET 102
Query: 157 CVLTGHNHYVMCAQFHPTD---------------DIVVSASLDQTIRVWDISGLRKKN 199
+ ++ + +V+ + T +W ++
Sbjct: 103 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160
Score = 41.8 bits (96), Expect = 2e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKN 199
H+ + VS S D ++VWD L +N
Sbjct: 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN 48
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 54.8 bits (130), Expect = 1e-08
Identities = 8/188 (4%), Positives = 35/188 (18%), Gaps = 9/188 (4%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSG 69
++ L++ + + + + + + +
Sbjct: 135 RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV---EDKPIQSWEAETYAQPDVLAVWNQ 191
Query: 70 GKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFF 129
+ + + + + + + +D +
Sbjct: 192 HESS---GVMATPFYTARKDIDPADP-TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA 247
Query: 130 HHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRV 189
+ + + + I + H V +
Sbjct: 248 VNPAKTRA-FGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 190 WDISGLRK 197
+D L K
Sbjct: 306 YDAETLEK 313
Score = 27.8 bits (60), Expect = 3.9
Identities = 3/49 (6%), Positives = 10/49 (20%)
Query: 9 SARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGI 57
++ + G + +D + D +
Sbjct: 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327
Score = 27.5 bits (59), Expect = 5.3
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 176 DIVVSASLDQTIRVWDIS 193
D +++ + + V D
Sbjct: 2 DYILAPARPDKLVVIDTE 19
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 52.8 bits (125), Expect = 6e-08
Identities = 17/187 (9%), Positives = 40/187 (21%), Gaps = 7/187 (3%)
Query: 11 RVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGG 70
+V + ++ + + +G + +
Sbjct: 146 QVYLMRAADDGSLYVAGPDIYKMDVKT---GKYTVALPLRNWNRKGYSAPDVLYFWPHQS 202
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+ I +++ Y + K K L + T
Sbjct: 203 PRHEFSMLYTIARFKDDKQDPATAD---LLYGYLSVDLKTGKTHTQEFADLTELYFTGLR 259
Query: 131 HEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVW 190
+ + + R I +H C F D + + V+
Sbjct: 260 SPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 318
Query: 191 DISGLRK 197
+ L K
Sbjct: 319 NPDTLEK 325
Score = 49.4 bits (116), Expect = 6e-07
Identities = 27/336 (8%), Positives = 76/336 (22%), Gaps = 64/336 (19%)
Query: 14 GLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFD-EHEGPVRGICFH-NQQPIFVSGGK 71
G + +++ + + + + D +T+ + + + + +V
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 72 --------------------------------MIVMAYQGCILESRNEPCLFRIKSVLGD 99
++ G + + P +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVL 159
+++V++ + + L + I ++ L
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD-IYKMDVKTGKYTVAL 179
Query: 160 TGHN-------------------------HYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
N A+F +A L D+
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239
Query: 195 LRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVKS 254
+ + + P Y ++ + + + +
Sbjct: 240 GKTHTQEFADLTELYFTGLRSPKDPN---QIYGVLNRLAKYDLKQRKLIKAANLDHTYYC 296
Query: 255 GAWDESGVFIYTTSNHIKYAIVNGDHG-IIRTLDLP 289
A+D+ G +Y A+ N D ++ + LP
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 28.9 bits (63), Expect = 2.1
Identities = 3/45 (6%), Positives = 13/45 (28%)
Query: 10 ARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPV 54
++F K + + +++ ++ G +
Sbjct: 292 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDM 336
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 52.1 bits (123), Expect = 9e-08
Identities = 15/194 (7%), Positives = 46/194 (23%), Gaps = 3/194 (1%)
Query: 15 LSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIV 74
F +G + + E N G+++
Sbjct: 152 HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW 211
Query: 75 MAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYP 134
Y G I + + + + + + + + H R +
Sbjct: 212 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 271
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDI 192
+ + + + ++ + H + + ++ D+T+ + D
Sbjct: 272 EWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 330
Query: 193 SGLRKKNVAPGMGK 206
+ +G
Sbjct: 331 ESGEELRSVNQLGH 344
Score = 29.8 bits (65), Expect = 1.1
Identities = 10/170 (5%), Positives = 29/170 (17%), Gaps = 19/170 (11%)
Query: 138 SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP----------TDDIVVSASLDQTI 187
+ + ++ I ++ G + +
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMIDGGFLPNP--VVADDGSFIAHASTVFSRIARGERTDYV 80
Query: 188 RVWDISGLRKKNVAPGMGKLVLSMKSK------HPIWKYCKPVKYCNPKHTLHICNRKME 241
V+D L + + P K ++ +
Sbjct: 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140
Query: 242 PLCNIHENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIY 291
+ F + + G G ++
Sbjct: 141 FKRMLDVPDCYHIFPTAPDT-FFMHCRDGSLAKVAFGTEGTPEITHTEVF 189
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 47.3 bits (111), Expect = 3e-06
Identities = 22/239 (9%), Positives = 44/239 (18%), Gaps = 50/239 (20%)
Query: 14 GLSFHPKRPWILSSLHN----------GVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
G + P R + + V+++ D + H
Sbjct: 21 GFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHA----QHVPS 76
Query: 64 PIFVSGGKMIVMAYQ--------------------------GCILESRNEPCLFRIKSVL 97
P + Y C+L F ++
Sbjct: 77 PYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFT--ALC 134
Query: 98 GDDYKIKVWNYKQRKCI---FTLLGHLDYIRTTFFHHEY--PWILSASDDQTIRIWYWQS 152
+ V K + F + L + +R +
Sbjct: 135 ESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSG 194
Query: 153 RN--CICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDIS-GLRKKNVAPGMGKLV 208
+ + P + Q + G + PG V
Sbjct: 195 DKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWV 253
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 44.9 bits (105), Expect = 2e-05
Identities = 28/199 (14%), Positives = 55/199 (27%), Gaps = 11/199 (5%)
Query: 138 SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRK 197
+ D I + S+ + V+ V ++ + ++ D I + D+
Sbjct: 37 TLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEP 95
Query: 198 KNVAPGMGKL----VLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTRVK 253
VA + V S K K +Y Y P+ + V
Sbjct: 96 TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 155
Query: 254 SGAWDESG--VFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYLDRECSPHV 311
+ + I + H ++ + + G + L + I V +
Sbjct: 156 TQTYHPEPRVAAIIASHEHPEFIVNVKETGKV----LLVNYKDIDNLTVTSIGAAPFLAD 211
Query: 312 LRIDPTEFKFKLALINHKY 330
D + F A N
Sbjct: 212 GGWDSSHRYFMTAANNSNK 230
Score = 38.4 bits (88), Expect = 0.002
Identities = 23/190 (12%), Positives = 52/190 (27%), Gaps = 22/190 (11%)
Query: 16 SFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVM 75
S + V+ + ++ L + + + F++
Sbjct: 171 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNK 230
Query: 76 AYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPW 135
+ R S L D K + + + +T +
Sbjct: 231 VAVIDSKD--------RRLSALVDVGKTPHPG----RGANFVHPKYGPVWSTSHLGDGSI 278
Query: 136 ILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV-------SASLDQTIR 188
L +D + + W+ + L G + + HP + A + Q++
Sbjct: 279 SLIGTDPKNHPQYAWK---KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 335
Query: 189 VWDISGLRKK 198
V+D+ L K
Sbjct: 336 VFDLKNLDAK 345
Score = 35.7 bits (81), Expect = 0.016
Identities = 15/195 (7%), Positives = 46/195 (23%), Gaps = 28/195 (14%)
Query: 2 LTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLE--KFDEHEGPVRGICF 59
+ +T A V ++L + I + D + + R +
Sbjct: 55 VKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA-RSVES 112
Query: 60 HNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLG 119
+ + + + + + + +
Sbjct: 113 S---KFKGYEDRYTIAG--------------------AYWPPQFAIMDGETLEPKQIVST 149
Query: 120 HLDYIRTTFFHHE-YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIV 178
+ T +H E + AS + I + + ++ + + +
Sbjct: 150 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL 209
Query: 179 VSASLDQTIRVWDIS 193
D + R + +
Sbjct: 210 ADGGWDSSHRYFMTA 224
Score = 34.2 bits (77), Expect = 0.046
Identities = 24/196 (12%), Positives = 49/196 (25%), Gaps = 39/196 (19%)
Query: 29 HNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEP 88
+ + R + L + P RG F + + V +
Sbjct: 229 NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG------------ 276
Query: 89 CLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWIL-------SASD 141
S+ K K + L G H + + A
Sbjct: 277 ------SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI 330
Query: 142 DQTIRIWYWQSRNCI---------CVLTGHNHYVMCAQFHPTDDIVV-----SASLDQTI 187
Q++ ++ ++ + L V+ +++ D V + +
Sbjct: 331 SQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 390
Query: 188 RVWDISGLRKKNVAPG 203
V D L+ K V
Sbjct: 391 VVVDDKTLKLKAVVKD 406
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 41.1 bits (95), Expect = 3e-04
Identities = 11/228 (4%), Positives = 39/228 (17%), Gaps = 44/228 (19%)
Query: 10 ARVKGLSFHPKRPWIL-SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVS 68
RV + +L + + +
Sbjct: 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYL 180
Query: 69 G---GKMIVMAY-----------------QGCILESRNEPCLFRIKSVLGDDYKIKVWNY 108
G + Q C ++ + +
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPA 240
Query: 109 KQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTI-----------------RIWYWQ 151
+ G+ + F +++ +
Sbjct: 241 AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300
Query: 152 SRNCICVLT-GHNHYVMCAQFHP--TDDIVVSASLDQTIRVWDISGLR 196
+ + H D +++ + + ++D + +
Sbjct: 301 ASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
Score = 29.6 bits (65), Expect = 1.3
Identities = 6/55 (10%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Query: 10 ARVKGLSFHP--KRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQ 62
+ +S V+ ++D + + +GP + N+
Sbjct: 314 HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLSVQNE 367
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.4 bits (90), Expect = 0.001
Identities = 13/174 (7%), Positives = 37/174 (21%), Gaps = 8/174 (4%)
Query: 138 SASDDQTIRIWYWQSRNCICVL--TGHNHYVMCAQFHPTDDIV-VSASLDQTIRVWDISG 194
++ + Q I +W + + V P + V + + + I+
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 195 LRKKNVAPGMGKLV-----LSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHEN 249
L +S + L +
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 250 TRVKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDLPIYITKIKGNQVYYL 303
+ ++ + + P +T ++G ++
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM 182
Score = 31.3 bits (69), Expect = 0.30
Identities = 18/191 (9%), Positives = 41/191 (21%), Gaps = 15/191 (7%)
Query: 17 FHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMA 76
P + +G N L + + + + +
Sbjct: 115 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV 174
Query: 77 YQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWI 136
P V + + VW K + LD + F +
Sbjct: 175 EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 234
Query: 137 LSASDDQ-----------TIRIWYWQSRNCICVLTGHNH---YVMCAQFHPTDD-IVVSA 181
+ + D I ++ + G + ++ +
Sbjct: 235 IHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAG 294
Query: 182 SLDQTIRVWDI 192
I V++I
Sbjct: 295 QKSHHISVYEI 305
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 37.5 bits (85), Expect = 0.004
Identities = 8/89 (8%), Positives = 18/89 (20%), Gaps = 2/89 (2%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHY 165
+ I + T+ + + +
Sbjct: 187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-D 245
Query: 166 VMCAQFHPTDD-IVVSASLDQTIRVWDIS 193
P + V+ S T+ V D +
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
Score = 36.8 bits (83), Expect = 0.006
Identities = 12/102 (11%), Positives = 25/102 (24%), Gaps = 2/102 (1%)
Query: 138 SASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDD-IVVSASLDQTIRVWDISGLR 196
+ S+ I + S + ++ M A P + V+ + + + D +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 197 KKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNR 238
P S Y + N
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT 107
Score = 35.6 bits (80), Expect = 0.013
Identities = 20/277 (7%), Positives = 47/277 (16%), Gaps = 24/277 (8%)
Query: 26 SSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFH-NQQPIFVSG-------------GK 71
++ + I + D N + P G + ++V+
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 72 MIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHH 131
+I G + + V + +
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSP 125
Query: 132 EYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWD 191
+ + ++ + P V A+ D
Sbjct: 126 DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVI 185
Query: 192 ISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHENTR 251
+ + + K I + I
Sbjct: 186 DTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD 245
Query: 252 VKSGAWDESGVFIYTTSNHIKYAIVNGDHGIIRTLDL 288
A G +Y + +D
Sbjct: 246 PAGIAVTPDGKKVYVA---------LSFCNTVSVIDT 273
Score = 27.1 bits (58), Expect = 6.2
Identities = 8/145 (5%), Positives = 29/145 (20%), Gaps = 16/145 (11%)
Query: 36 WDYRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKS 95
+ ++ P + ++V+ + ++ + S +
Sbjct: 143 INTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAP 202
Query: 96 VLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT-----TFFHHEYPW-----------ILSA 139
Y + + T P ++
Sbjct: 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVAL 262
Query: 140 SDDQTIRIWYWQSRNCICVLTGHNH 164
S T+ + + + +
Sbjct: 263 SFCNTVSVIDTATNTITATMAVGKN 287
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 34.4 bits (78), Expect = 0.039
Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 135 WILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIRVWDISG 194
+ ++ D I + + VL + V ++ + + D + + D+
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 92
Query: 195 LRKKNVA 201
VA
Sbjct: 93 KEPTTVA 99
>d1idpa_ d.17.4.1 (A:) Scytalone dehydratase {Fungus (Magnaporthe
grisea) [TaxId: 148305]}
Length = 147
Score = 30.6 bits (68), Expect = 0.25
Identities = 13/86 (15%), Positives = 21/86 (24%), Gaps = 20/86 (23%)
Query: 119 GHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCIC--------VLTGHNHYVMCAQ 170
D T S+D+ I + + + GH H
Sbjct: 67 VLGDPTLRTQHFIGGTRWEKVSEDEVIGYHQLRVPHQRYKDTTMKEVTMKGHAHSANLHW 126
Query: 171 FHPTDDIVVSASLDQTIRVWDISGLR 196
+ D VW +GL+
Sbjct: 127 YKKIDG------------VWKFAGLK 140
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 29.9 bits (66), Expect = 1.0
Identities = 22/167 (13%), Positives = 55/167 (32%), Gaps = 18/167 (10%)
Query: 17 FHPKRPWILSSL-----HNGVIQLWDYRMNTLLEKFDEHEG-PVRGICFHNQQPIFVSGG 70
F + + ++ N ++ FD+ + PV G C ++ + G
Sbjct: 57 FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISG 116
Query: 71 KMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFH 130
+ ++ A + ++ S + ++ ++ + + F
Sbjct: 117 ECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTM 176
Query: 131 HE----YPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHP 173
+E + +L+ + D I I + G+ + V Q+HP
Sbjct: 177 NEKLKKFFNVLTTNTDGKI--------EFISTMEGYKYPVYGVQWHP 215
>d1oa8a_ b.145.1.1 (A:) Ataxin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 128
Score = 28.6 bits (63), Expect = 1.1
Identities = 9/78 (11%), Positives = 25/78 (32%)
Query: 166 VMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVK 225
+ A+ I S + + V ++ + + ++P + + +
Sbjct: 39 IQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWS 98
Query: 226 YCNPKHTLHICNRKMEPL 243
C P+ T + + L
Sbjct: 99 SCCPERTSQLFDLPCSKL 116
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 29.2 bits (64), Expect = 1.3
Identities = 15/117 (12%), Positives = 32/117 (27%), Gaps = 12/117 (10%)
Query: 100 DYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW-YWQSRNCICV 158
I V R IF G++ + H E+P + +D Q I I +
Sbjct: 125 GRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 184
Query: 159 LTGHNHYVM-----------CAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGM 204
G + + ++ + + ++ G + +
Sbjct: 185 YEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV 241
>d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 28.5 bits (63), Expect = 2.5
Identities = 32/191 (16%), Positives = 49/191 (25%), Gaps = 25/191 (13%)
Query: 71 KMIVMAYQGCILESRNE----PCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRT 126
K ++ I S N +I G + + R+ LG + +
Sbjct: 57 KGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTRE--EGDLGPVYGFQW 114
Query: 127 TFFHHEYPWILSASDDQTIRIWYW---------QSRNCICVLTGHNHYVMCAQF--HPTD 175
F EY + S Q + R I + A H
Sbjct: 115 RHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALC 174
Query: 176 DIVVSA---SLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHT 232
V S R D+ N+A L + KP + +
Sbjct: 175 QFYVVNSELSCQLYQRSGDMGLGVPFNIA-SYALLTYMIA----HITGLKPGDFIHTLGD 229
Query: 233 LHICNRKMEPL 243
HI +EPL
Sbjct: 230 AHIYLNHIEPL 240
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 302
Score = 28.2 bits (61), Expect = 3.5
Identities = 21/183 (11%), Positives = 39/183 (21%), Gaps = 11/183 (6%)
Query: 4 KFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMNTLLEKFDEHEGPVRGICFHNQQ 63
+F+ V PW + N + P +
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVL-AGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKI 122
Query: 64 PIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDY 123
P + ++ S S + + Q I L
Sbjct: 123 PRSNVSVAIFMLDTVTLCGNS------DDFVSQQPERPRNLALARTQLAWIKKQLAAAKE 176
Query: 124 IRTTFFHHEYPWILS----ASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVV 179
H W ++ + + L GH+H + Q V+
Sbjct: 177 DYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVL 236
Query: 180 SAS 182
S +
Sbjct: 237 SGA 239
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 28.2 bits (61), Expect = 3.6
Identities = 21/245 (8%), Positives = 52/245 (21%), Gaps = 11/245 (4%)
Query: 42 TLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDY 101
T+LE + G VR + A G + +
Sbjct: 57 TVLEASERPGGRVRTYRN----------EEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 106
Query: 102 KIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTG 161
+ + + ++ Y +S +
Sbjct: 107 NEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELK 166
Query: 162 HNHYVMCAQFHPTDDIVVSASLDQTIRVWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYC 221
+ + T + + + + + KH
Sbjct: 167 RTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAY 226
Query: 222 KPVKYCNPKHTLHICNRKMEPLCNI-HENTRVKSGAWDESGVFIYTTSNHIKYAIVNGDH 280
+ + + + H N +V ++ V + + + V D+
Sbjct: 227 EKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADY 286
Query: 281 GIIRT 285
I+ T
Sbjct: 287 VIVCT 291
>d1mi8a_ b.86.1.2 (A:) DnaB intein {Synechocystis sp. pcc 6803
[TaxId: 1148]}
Length = 158
Score = 27.1 bits (59), Expect = 4.7
Identities = 12/128 (9%), Positives = 30/128 (23%), Gaps = 11/128 (8%)
Query: 66 FVSGGKMIVMAYQGCILESRNEPCLFRIKSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIR 125
+ + A ++ + + Y +K + +
Sbjct: 24 LLDEKDFEIWAINEQTMKLESAKVSRVFMTGKKLVYILKTRLGRT----------IKATA 73
Query: 126 TTFFHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
F W + + L +Q + D +VS +
Sbjct: 74 NHRFLTIDGWK-RLDELSLKEHIALPRKLESSSLQLSPEIEKLSQSDISWDSIVSITETG 132
Query: 186 TIRVWDIS 193
V+D++
Sbjct: 133 VEEVFDLT 140
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ
{Enterobacter aerogenes [TaxId: 548]}
Length = 271
Score = 27.0 bits (58), Expect = 7.6
Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 8/88 (9%)
Query: 106 WNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYW--------QSRNCIC 157
+ + L T F H P L + I + +
Sbjct: 131 LTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTR 190
Query: 158 VLTGHNHYVMCAQFHPTDDIVVSASLDQ 185
+ GHNH + Q+ + ++ Q
Sbjct: 191 IFCGHNHSLTMTQYRQALISTLPGTVHQ 218
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2
{Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 218
Score = 26.8 bits (58), Expect = 8.2
Identities = 15/143 (10%), Positives = 37/143 (25%), Gaps = 9/143 (6%)
Query: 38 YRMNTLLEKFDEHEGPVRGICFHNQQPIFVSGGKMIVMAYQ----GCILESRNEPCLFRI 93
R E + + ++PI+ + I+++ N+ +
Sbjct: 56 VRRCCAYENDTLYN-ALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGL 114
Query: 94 KSVLGDDYKIKVWNYKQRKCIFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWYWQSR 153
+ ++ + T P+I D+ + +
Sbjct: 115 DITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHE 174
Query: 154 NC---ICVLTGHNHYVMCAQFHP 173
+ I N+ + FHP
Sbjct: 175 SYGPNIIAAVEQNN-CLGTVFHP 196
>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492
{Silicibacter sp. tm1040 [TaxId: 292414]}
Length = 261
Score = 26.5 bits (57), Expect = 9.8
Identities = 17/160 (10%), Positives = 35/160 (21%), Gaps = 4/160 (2%)
Query: 129 FHHEYPWILSASDDQTIRIWYWQSRNCICVLTGHNHYVMCAQFHPTDDIVVSASLDQTIR 188
E + + VL GH+ +++ A +
Sbjct: 102 LCPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRN 161
Query: 189 VWDISGLRKKNVAPGMGKLVLSMKSKHPIWKYCKPVKYCNPKHTLHICNRKMEPLCNIHE 248
V IS L + + E +
Sbjct: 162 VVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPA-FLD 220
Query: 249 NTRVKSGAWDESGVFIYTTSNH--IKYAIVNGDHGIIRTL 286
AWD V I +H + + + + ++ +
Sbjct: 221 QAIWLVEAWDADHV-IAFEKHHFNVIEPLADPESDLVAVI 259
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.427
Gapped
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,455,993
Number of extensions: 118894
Number of successful extensions: 585
Number of sequences better than 10.0: 1
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 130
Length of query: 641
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 550
Effective length of database: 1,158,166
Effective search space: 636991300
Effective search space used: 636991300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)