RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9329
(102 letters)
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 84.6 bits (209), Expect = 3e-21
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKS-VDKIHPYTDYYIWKDAKIVNGKRQ---PPNNWLSCFG 56
+ ++ D VPNH + + V K+ + YY + D + K + + +
Sbjct: 80 LGIIQDIVPNHMAVNSLNWRLMDVLKMGKKSKYYTYFDFFPEDDKIRLPILGEDLDTVIS 139
Query: 57 GSAWEWNDKRQQYYYHAFAIQQPDLNYR 84
+ +Y+ F + P
Sbjct: 140 KGLLKIVKDGDEYFLEYFKWKLPLTEVG 167
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea
[TaxId: 489]}
Length = 554
Score = 58.4 bits (140), Expect = 4e-12
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+ V+DF+ NHTSNEH W + + ++Y + + + +
Sbjct: 177 ISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGG 236
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
+ ++ + F Q DLNY V M
Sbjct: 237 FSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAM 268
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima
[TaxId: 2336]}
Length = 572
Score = 52.7 bits (125), Expect = 4e-10
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 6/93 (6%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
++++LDF+P + + + HP Y+I + +
Sbjct: 196 IRVILDFIPRTAARDSDLI-----REHPDWFYWIKVEELA-DYTPPRAEELPFKVPDEDE 249
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
++ N +++K
Sbjct: 250 LEIIYNKENVKRHLKKFTLPPNLIDPQKWEKIK 282
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella
sp., lx3 [TaxId: 576]}
Length = 478
Score = 50.4 bits (119), Expect = 2e-09
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 5/94 (5%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKS-VDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSA 59
M+L++D V NHTS++HPWFI+S DK +PY DYY W+D K QPPNN+ S FGGSA
Sbjct: 93 MRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKD----NQPPNNYPSFFGGSA 148
Query: 60 WEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
W+ + K QYY H FA QQPDLN+ V +++
Sbjct: 149 WQKDAKSGQYYLHYFARQQPDLNWDNPKVREDLY 182
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 403
Score = 46.1 bits (108), Expect = 8e-08
Identities = 11/93 (11%), Positives = 19/93 (20%), Gaps = 3/93 (3%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+++ +D V NH A + N C S
Sbjct: 91 VRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSA---WDFNDGKCKTASGG 147
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
+ + DL V +
Sbjct: 148 IESYNDPYQVRDCQLVGLLDLALEKDYVRSMIA 180
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus
[TaxId: 1396]}
Length = 479
Score = 42.3 bits (98), Expect = 2e-06
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKI-HPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSA 59
MKL++D V NHTS+EH WFI+S + Y DYYIW+ + + PNNW + F GSA
Sbjct: 93 MKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRP----GKEGKEPNNWGAAFSGSA 148
Query: 60 WEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
W++++ +YY H F+ +QPDLN+ + V ++
Sbjct: 149 WQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVY 182
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium
adolescentis [TaxId: 1680]}
Length = 434
Score = 40.5 bits (93), Expect = 9e-06
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 5/97 (5%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSA- 59
+++D + NH S E F + K Y ++ V + +
Sbjct: 78 HNIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVFPNGATEEDLAGIYRPRPG 137
Query: 60 ----WEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
+ + + +F QQ D++ + +
Sbjct: 138 LPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGWEYL 174
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707
[TaxId: 1416]}
Length = 394
Score = 39.6 bits (91), Expect = 2e-05
Identities = 14/122 (11%), Positives = 34/122 (27%), Gaps = 29/122 (23%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNG----------------- 43
+++ D V NH + +++P +
Sbjct: 93 IQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFK 152
Query: 44 ------------KRQPPNNWLSCFGGSAWEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDE 91
+ + NN + F G W+ + + + D++ VV+E
Sbjct: 153 WRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNE 212
Query: 92 MK 93
++
Sbjct: 213 LR 214
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm
(Tenebrio molitor), larva [TaxId: 7067]}
Length = 378
Score = 38.0 bits (87), Expect = 6e-05
Identities = 11/93 (11%), Positives = 19/93 (20%), Gaps = 13/93 (13%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+++ +D V NH + + H +Y P
Sbjct: 89 VRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAV------------PYGSGDFHSPCEV 136
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
DLN V +
Sbjct: 137 NNYQDADNVRNCELV-GLRDLNQGSDYVRGVLI 168
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon
Pyrococcus woesei [TaxId: 2262]}
Length = 361
Score = 37.9 bits (87), Expect = 6e-05
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+K++ D V NH + + +P+ Y W D V + N+L
Sbjct: 101 IKVIADVVINHRAGGDLEW-------NPFVGDYTWTDFSKVASGK-YTANYLDFHPNELH 152
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
++ + ++ D + +++
Sbjct: 153 CCDEGTFGGFPDICHHKEWDQYWLWKSNESYA 184
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum
vulgare), AMY1 isozyme [TaxId: 4513]}
Length = 347
Score = 35.7 bits (81), Expect = 4e-04
Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 13/93 (13%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
++ + D V NH ++ T +
Sbjct: 83 VQAIADIVINHRCADYKDSRGIYCIFEGGTSDG-------------RLDWGPHMICRDDT 129
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
+++D A PD+++ V E+K
Sbjct: 130 KYSDGTANLDTGADFAAAPDIDHLNDRVQRELK 162
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase
{Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis) [TaxId: 228]}
Length = 354
Score = 34.1 bits (77), Expect = 0.001
Identities = 11/93 (11%), Positives = 24/93 (25%), Gaps = 14/93 (15%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+ + +D + NH + + Y +D + S +
Sbjct: 79 VDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQD-----------FHESCTINNSDY 127
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
+ R Q DL+ V + +
Sbjct: 128 GNDRYRVQNCELVG---LADLDTASNYVQNTIA 157
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp.,
ksm-k38 [TaxId: 1409]}
Length = 390
Score = 33.9 bits (76), Expect = 0.002
Identities = 16/121 (13%), Positives = 33/121 (27%), Gaps = 30/121 (24%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYY--------------------------- 33
+ + D V NH +++P +
Sbjct: 95 INVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFK 154
Query: 34 -IWKDAKIVNGKRQPPNNWLSCFGGSAWEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
W V+ ++ N + F + W W + Y ++++ V DE+
Sbjct: 155 WRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYLL--GSNIDFSHPEVQDEL 212
Query: 93 K 93
K
Sbjct: 213 K 213
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus
oryzae, Taka-amylase [TaxId: 5062]}
Length = 381
Score = 32.7 bits (73), Expect = 0.004
Identities = 11/99 (11%), Positives = 26/99 (26%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
M L++D V NH + P++ + + G +
Sbjct: 112 MYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTV 171
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMKVRALKY 99
D + +D +++ +K+
Sbjct: 172 SLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKH 210
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan
maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}
Length = 357
Score = 31.0 bits (69), Expect = 0.015
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+K++ D VPNH + +P +I+ W++ G + F G
Sbjct: 107 VKVLYDVVPNHMNRGYPDK-----EINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDA 161
Query: 61 EWNDKRQQYYYH 72
+ N Q Y
Sbjct: 162 DLNTGHPQVYGM 173
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain
{Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
Length = 432
Score = 30.9 bits (68), Expect = 0.020
Identities = 19/102 (18%), Positives = 31/102 (30%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
L+LD V NHT + HPWF K + P+++ S G ++
Sbjct: 135 GYLILDGVFNHTGDSHPWFDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSYASFLGFNSL 194
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMKVRALKYDNA 102
+ I + + V + D A
Sbjct: 195 PKLNYGNSGSAVRGVIYNNSNSVAKTYLNPPYSVDGWRLDAA 236
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera
(Bacillus amyloliquefaciens) and (Bacillus
licheniformis) [TaxId: 1390]}
Length = 393
Score = 29.6 bits (65), Expect = 0.062
Identities = 15/121 (12%), Positives = 33/121 (27%), Gaps = 28/121 (23%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDY---------------------------- 32
+++ D V NH + + +++P
Sbjct: 93 VQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIKAWTDFRFPGRGNTYSDFK 152
Query: 33 YIWKDAKIVNGKRQPPNNWLSCFGGSAWEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
+ W + + + F G W+ + + + D++Y VV E
Sbjct: 153 WHWYHFDGADWDESRKISRIFKFRGEGKAWDWEVSSENGNYDYLMYADVDYDHPDVVAET 212
Query: 93 K 93
K
Sbjct: 213 K 213
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae
[TaxId: 573]}
Length = 563
Score = 29.0 bits (63), Expect = 0.10
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 1 MKLVLDFVPNHTSNEHPWF-IKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSA 59
M +++D V NHT+ P +DKI P+ + + V ++ +
Sbjct: 195 MNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAK 254
Query: 60 WEWNDKRQQYYYHAFAIQQPDLNY 83
+ + + DL
Sbjct: 255 LIADSLAVWTTDYKIDGFRFDLML 278
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix
orenii [TaxId: 31909]}
Length = 409
Score = 28.5 bits (62), Expect = 0.14
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVD-KIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSA 59
+K+++D NHTS HPWF+K+ K Y DYY+W + +
Sbjct: 96 IKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGG--------- 146
Query: 60 WEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
W+ YY F PDLNY V +++
Sbjct: 147 RVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVI 180
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 393
Score = 27.6 bits (60), Expect = 0.25
Identities = 17/121 (14%), Positives = 32/121 (26%), Gaps = 28/121 (23%)
Query: 1 MKLVLDFVPNHT--SNEHPWFIKSV-------DKIHPYTDYYIWKDAK------------ 39
M++ D V +H ++ W +I W
Sbjct: 96 MQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQAWTKFDFPGRGNTYSSFK 155
Query: 40 -------IVNGKRQPPNNWLSCFGGSAWEWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
V+ + + F G W+ + + + DL+ VV E+
Sbjct: 156 WRWYHFDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYDYLMYADLDMDHPEVVTEL 215
Query: 93 K 93
K
Sbjct: 216 K 216
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas
amyloderamosa [TaxId: 32043]}
Length = 475
Score = 27.3 bits (59), Expect = 0.34
Identities = 12/80 (15%), Positives = 22/80 (27%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+K+ +D V NHT+ W Y+ + + G +
Sbjct: 125 IKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFN 184
Query: 61 EWNDKRQQYYYHAFAIQQPD 80
+N Q + A
Sbjct: 185 TYNTVAQNLIVDSLAYWANT 204
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase
{Thermoanaerobacterium [TaxId: 28895]}
Length = 406
Score = 26.6 bits (57), Expect = 0.52
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 10/93 (10%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+K+++DF PNHTS + Y + + N + +
Sbjct: 131 IKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGG----------YTNDTNGYFHHYG 180
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
+ + + DLN + + +K
Sbjct: 181 GTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLK 213
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain
{Flavobacterium sp. 92 [TaxId: 197856]}
Length = 422
Score = 25.5 bits (54), Expect = 1.3
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
M L+ D V +H H W K P D+ + + P +
Sbjct: 118 MGLIQDVVLSHIGKHHWWM-----KDLPTPDWINYGG-------KFVPTQHHRVAVQDPY 165
Query: 61 EWNDKRQQYYYHAFAIQQPDLNYRFQAVVDEM 92
+ + F PDLN V + +
Sbjct: 166 AAQADSENFTKGWFVEGMPDLNQTNPLVANYL 197
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase
{Bacillus stearothermophilus, maltogenic alpha-amylase
[TaxId: 1422]}
Length = 407
Score = 25.4 bits (54), Expect = 1.4
Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIWKDAKIVNGKRQPPNNWLSCFGGSAW 60
+K+++DFVPNH++ + Y + + + S W
Sbjct: 122 IKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGN----YFDDATKGYFHHNGDISNW 177
Query: 61 EW-NDKRQQYYYHAFAIQQPDLNYRFQAVVDEMK 93
+ + + + + DL+ + +
Sbjct: 178 DDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLT 211
>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 1449
Score = 23.6 bits (50), Expect = 6.6
Identities = 4/11 (36%), Positives = 6/11 (54%)
Query: 16 HPWFIKSVDKI 26
H FI + K+
Sbjct: 91 HVGFIAKIKKV 101
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus
subtilis [TaxId: 1423]}
Length = 344
Score = 23.3 bits (49), Expect = 6.6
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1 MKLVLDFVPNHTSNEHPWFIKSVDKIHPYTDYYIW 35
+K+++D V NHT+ ++ V I +T
Sbjct: 89 IKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQ 123
>d2dt6a1 a.217.1.1 (A:48-110) Splicing factor 3 subunit 1, SF3A1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 22.0 bits (47), Expect = 8.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 27 HPYTDYYIWKDAKIVNGKRQPP 48
PY YY K ++ GK Q P
Sbjct: 41 DPYHAYYRHKVSEFKEGKAQEP 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.465
Gapped
Lambda K H
0.267 0.0400 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 458,103
Number of extensions: 20630
Number of successful extensions: 114
Number of sequences better than 10.0: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 52
Length of query: 102
Length of database: 2,407,596
Length adjustment: 63
Effective length of query: 39
Effective length of database: 1,542,606
Effective search space: 60161634
Effective search space used: 60161634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)