BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9332
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0VC71|TTLL1_BOVIN Probable tubulin polyglutamylase TTLL1 OS=Bos taurus GN=TTLL1 PE=2
SV=1
Length = 423
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 93/139 (66%), Gaps = 18/139 (12%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
RGK++T+KLF I W+IV SLK+V+ +M NDKHCFECYGYDIIID++LKPWLIEVNASPS
Sbjct: 273 RGKEVTSKLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPS 332
Query: 77 LTCTTVNDRILKYKLIDNILNIVM---------WNKYKKADGGAAGGEALNLGNFQLLLD 127
LT +T NDRILKY LI++ LNI + WNK + LGN+++L D
Sbjct: 333 LTSSTANDRILKYNLINDTLNIAVPNGEIPDCKWNKSPPKEV---------LGNYEILYD 383
Query: 128 EEYDENNVKQNISKHNPNR 146
EE + + + + P +
Sbjct: 384 EELAQGDGAERELRSRPGQ 402
>sp|Q91V51|TTLL1_MOUSE Probable tubulin polyglutamylase TTLL1 OS=Mus musculus GN=Ttll1
PE=1 SV=1
Length = 423
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 18/139 (12%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
RG+++T+KLF I W+IV SLK+V+ +M NDKHCFECYGYDIIID++LKPWLIEVNASPS
Sbjct: 273 RGREVTSKLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPS 332
Query: 77 LTCTTVNDRILKYKLIDNILNIVM---------WNKYKKADGGAAGGEALNLGNFQLLLD 127
LT +T NDRILKY LI++ LNI + WNK + LGN+++L D
Sbjct: 333 LTSSTANDRILKYNLINDTLNIAVPNGEIPDCKWNKSPPKEV---------LGNYEILYD 383
Query: 128 EEYDENNVKQNISKHNPNR 146
EE + + + ++ P +
Sbjct: 384 EELAQGDGAERELRNRPGQ 402
>sp|Q5PPI9|TTLL1_RAT Probable tubulin polyglutamylase TTLL1 OS=Rattus norvegicus
GN=Ttll1 PE=2 SV=1
Length = 423
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 93/139 (66%), Gaps = 18/139 (12%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
RG+++T+KLF I W+IV SLK+V+ +M NDKHCFECYGYDIIID++LKPWLIEVNASPS
Sbjct: 273 RGREVTSKLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPS 332
Query: 77 LTCTTVNDRILKYKLIDNILNIVM---------WNKYKKADGGAAGGEALNLGNFQLLLD 127
LT +T NDRILKY LI++ LNI + WNK + LGN+++L D
Sbjct: 333 LTSSTANDRILKYNLINDTLNIAVPNGEIPDCKWNKSPPKEV---------LGNYEILYD 383
Query: 128 EEYDENNVKQNISKHNPNR 146
EE + + + + P +
Sbjct: 384 EELAQGDGAERELRSRPGQ 402
>sp|O95922|TTLL1_HUMAN Probable tubulin polyglutamylase TTLL1 OS=Homo sapiens GN=TTLL1
PE=2 SV=1
Length = 423
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 18/122 (14%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
RGK++T+KLF I W+IV SLK+V+ +M NDKHCFECYGYDIIID++LKPWLIEVNASPS
Sbjct: 273 RGKEVTSKLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPS 332
Query: 77 LTCTTVNDRILKYKLIDNILNIVM---------WNKYKKADGGAAGGEALNLGNFQLLLD 127
LT +T NDRILKY LI++ LNI + WNK + LGN+++L D
Sbjct: 333 LTSSTANDRILKYNLINDTLNIAVPNGEIPDCKWNKSPPKEV---------LGNYEILYD 383
Query: 128 EE 129
EE
Sbjct: 384 EE 385
>sp|Q23SI8|TTLL1_TETTS Probable alpha-tubulin polyglutamylase Ttll1 OS=Tetrahymena
thermophila (strain SB210) GN=Ttll1 PE=3 SV=1
Length = 433
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 18 GKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSL 77
G D+ NK F +I+ +I+ SLKSV I+ NDKHCFE YGYDI+ID KPWLIE+NASPSL
Sbjct: 297 GTDMANKCFDDINNIIIMSLKSVQSIIINDKHCFEMYGYDILIDENCKPWLIEINASPSL 356
Query: 78 TCTTVNDRILKYKLIDNILNIVM---WNKYKKADGGAAGGEALNLGNFQLLLDE 128
T T D+ LK +LI N+ IV+ WN + GA +G+F +L DE
Sbjct: 357 TVTGKIDKELKTELIKNVYQIVIPDDWND-DSSKTGANTSTQTKVGDFNILYDE 409
>sp|Q3SXZ7|TTLL9_HUMAN Probable tubulin polyglutamylase TTLL9 OS=Homo sapiens GN=TTLL9
PE=2 SV=3
Length = 439
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 18 GKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSL 77
G + LF +I + V SL+SV ++ +DKHCFE YGYDI+ID LKPWL+EVNASPSL
Sbjct: 287 GPEAVETLFRDIDNIFVKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL 346
Query: 78 TCTTVNDRILKYKLIDNILNIV 99
T ++ D LK L+++ L++V
Sbjct: 347 TASSQEDYELKTCLLEDTLHVV 368
>sp|Q3SZH6|TTLL9_BOVIN Probable tubulin polyglutamylase TTLL9 OS=Bos taurus GN=TTLL9 PE=2
SV=1
Length = 461
Score = 89.7 bits (221), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 18 GKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSL 77
G + LF+++ + + SL+SV ++ +DKHCFE YGYDI+ID LKPWL+EVNASPSL
Sbjct: 309 GPEAVETLFSDMDNIFIRSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL 368
Query: 78 TCTTVNDRILKYKLIDNILNIV 99
T ++ D LK L+++ L+IV
Sbjct: 369 TASSQEDYELKTCLLEDTLHIV 390
>sp|Q641W7|TTLL9_RAT Probable tubulin polyglutamylase TTLL9 OS=Rattus norvegicus
GN=Ttll9 PE=2 SV=1
Length = 461
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 18 GKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSL 77
G LF+++ + + SL+SV ++ +DKHCFE YGYDI+ID LKPWL+EVNASPSL
Sbjct: 309 GPKAVETLFSDMDNIFIKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL 368
Query: 78 TCTTVNDRILKYKLIDNILNIV 99
T ++ D LK L+++ L++V
Sbjct: 369 TASSQEDYELKTCLLEDTLHVV 390
>sp|A2APC3|TTLL9_MOUSE Probable tubulin polyglutamylase TTLL9 OS=Mus musculus GN=Ttll9
PE=2 SV=2
Length = 461
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 18 GKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSL 77
G LF+++ + + SL+SV ++ +DKHCFE YGYDI+ID LKPWL+EVNASPSL
Sbjct: 309 GPKAVETLFSDMDNIFIKSLQSVQKVIISDKHCFELYGYDILIDQDLKPWLLEVNASPSL 368
Query: 78 TCTTVNDRILKYKLIDNILNIV 99
T ++ D LK L+++ L++V
Sbjct: 369 TASSQEDYELKTCLLEDTLHVV 390
>sp|Q9BWV7|TTLL2_HUMAN Probable tubulin polyglutamylase TTLL2 OS=Homo sapiens GN=TTLL2
PE=5 SV=3
Length = 592
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 8/107 (7%)
Query: 4 LKQIISHSSQ-------VYPRGKDITNKL-FTNISWLIVHSLKSVSYIMANDKHCFECYG 55
+K++I H + Y R D+ + L + I +++ ++ +++ + +CFE +G
Sbjct: 312 IKEVIGHGCKWTLSRFFSYLRSWDVDDLLLWKKIHRMVILTILAIAPSVPFAANCFELFG 371
Query: 56 YDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIVMWN 102
+DI+ID+ LKPWL+EVN SP+LT D ++K KL+ +I++++ N
Sbjct: 372 FDILIDDNLKPWLLEVNYSPALTLDCSTDVLVKRKLVHDIIDLIYLN 418
>sp|Q8CHB8|TTLL5_MOUSE Tubulin polyglutamylase TTLL5 OS=Mus musculus GN=Ttll5 PE=2 SV=3
Length = 1328
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Query: 1 MRLLKQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMA--------NDKHCFE 52
+R LKQ GKD T L ++ LI+ ++ S +A + CFE
Sbjct: 300 LRYLKQ----------EGKD-TTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFE 348
Query: 53 CYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
YG+D++IDN LKPWL+EVN SPSL C D +K +I ++ +V
Sbjct: 349 LYGFDVLIDNTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVV 395
>sp|P0CAZ1|TTL3F_TETTS Tubulin glycylase 3F OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3F PE=3 SV=1
Length = 909
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 1 MRLLKQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIII 60
++LLK II G K+ I+ +I+HSLKSV + + CFE YG+DII
Sbjct: 740 LKLLKHIIKKE-----HGISYQKKIQPQINEIIIHSLKSVQKKIKQNNSCFEIYGFDIIF 794
Query: 61 DNQLKPWLIEVNASPSLTCTTVNDRI--LKYKLIDNILNIVMWNKY 104
D Q P+L+EVN SP+ C+ N+ I L+ ++ + LNI+ +Y
Sbjct: 795 DEQFNPYLLEVNLSPA--CSKRNEFISKLQKEMFISTLNILFNTEY 838
>sp|Q5R978|TTLL5_PONAB Tubulin polyglutamylase TTLL5 OS=Pongo abelii GN=TTLL5 PE=2 SV=1
Length = 1299
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Query: 1 MRLLKQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMA--------NDKHCFE 52
+R LKQ G+D T L ++ LI+ ++ S +A + CFE
Sbjct: 300 LRYLKQ----------EGRD-TTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFE 348
Query: 53 CYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
YG+D++ID+ LKPWL+EVN SPSL C D +K +I ++ +V
Sbjct: 349 LYGFDVLIDSTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVV 395
>sp|Q6EMB2|TTLL5_HUMAN Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3
Length = 1281
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 19/107 (17%)
Query: 1 MRLLKQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMA--------NDKHCFE 52
+R LKQ G+D T L ++ LI+ ++ S +A + CFE
Sbjct: 300 LRYLKQ----------EGRD-TTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFE 348
Query: 53 CYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
YG+D++ID+ LKPWL+EVN SPSL C D +K +I ++ +V
Sbjct: 349 LYGFDVLIDSTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVV 395
>sp|Q6EEF3|TTLL5_CHLAE Tubulin polyglutamylase TTLL5 OS=Chlorocebus aethiops GN=TTLL5 PE=2
SV=2
Length = 1299
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 1 MRLLKQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMA--------NDKHCFE 52
+R LKQ G+D T L ++ LI+ ++ S +A + CFE
Sbjct: 300 LRYLKQ----------EGRD-TTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFE 348
Query: 53 CYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
YG+D++ID LKPWL+EVN SPSL C D +K +I ++ +V
Sbjct: 349 LYGFDVLIDATLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVV 395
>sp|A4Q9E4|TTLL2_MOUSE Probable tubulin polyglutamylase TTLL2 OS=Mus musculus GN=Ttll2
PE=2 SV=1
Length = 540
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 15 YPRGKDITNKLF-TNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNA 73
Y R D+ + L IS +++ ++ +++ + +CFE +G+DI+ID+ LKPWL+EVN
Sbjct: 287 YLRNWDVDDLLLRQKISHMVILTVLAMAPSVPVTYNCFELFGFDILIDDNLKPWLLEVNY 346
Query: 74 SPSLTCTTVNDRILKYKLIDNILNIVMWN 102
+P+LT D +K L+ +++ ++ N
Sbjct: 347 NPALTLDCSTDESVKRSLVHDVIELLYLN 375
>sp|A8CVX7|TTLL6_DANRE Tubulin polyglutamylase ttll6 OS=Danio rerio GN=ttll6 PE=2 SV=1
Length = 778
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 22 TNKLFTNISWLIVHSLKSVSYIM-----------ANDKHCFECYGYDIIIDNQLKPWLIE 70
T KL+T+I I+ +L S I+ A+ CFE G+D+++D +LKPWL+E
Sbjct: 294 TEKLWTDIEDAIIKTLISAHPILKHNYQTCFPNHASGSACFEILGFDVLLDRRLKPWLLE 353
Query: 71 VNASPSLTCTTVNDRILKYKLIDNILNIV 99
VN SPS T + DR +K L+ + L ++
Sbjct: 354 VNHSPSFTTDSRLDREVKDSLLYDTLVLI 382
>sp|Q23FE2|TTL3C_TETTS Tubulin glycylase 3C OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3C PE=3 SV=1
Length = 1088
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 18 GKDI-TNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
G D+ T+K+ I I+ SLKSV + N K+ E YGYD ++D+ WLIE+N+SPS
Sbjct: 939 GYDVFTDKIEPQIVRAIIMSLKSVQDNIENRKNSIEMYGYDFMVDDLYNTWLIEINSSPS 998
Query: 77 LTCTT-VNDRILKYKLIDNILNIVM---WNKYKKADGGAAGG 114
+ +T V +R++K + ++I+ +V+ K KKA G
Sbjct: 999 MEYSTPVTERLVK-AVSEDIVKVVIDYGMEKSKKARKNIETG 1039
>sp|A4Q9F6|TTL13_MOUSE Tubulin polyglutamylase TTLL13 OS=Mus musculus GN=Ttll13 PE=2 SV=1
Length = 804
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 42 YIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
Y+ CFE G+DI++D++LKPWL+EVN SPS T + DR +K L+ + +N+V
Sbjct: 361 YLCGGTCACFEILGFDILLDHKLKPWLLEVNHSPSFTTDSRLDREVKDALLCDAMNLV 418
>sp|Q23MT7|TTL6A_TETTS Probable beta-tubulin polyglutamylase OS=Tetrahymena thermophila
(strain SB210) GN=Ttll6a PE=4 SV=1
Length = 1189
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMAN-----------DKHCFECYGYDIIIDNQLK 65
+G D+ NKL+ +I +++ ++ S +A+ + CFE G+DII+D+ LK
Sbjct: 599 QGHDV-NKLWKDIKRVLIKTIISAQPTLAHHYKSCQPDNFMNNMCFEILGFDIILDSHLK 657
Query: 66 PWLIEVNASPSLTCTTVNDR---ILKYKLIDNILNIVMWNKY---KKADGGAAGGEALNL 119
PW++EVN +PS + T DR + K L + K KKA E +L
Sbjct: 658 PWVLEVNHTPSFSTDTPLDRKEIMQKRVLTGKKVKYTPEEKLEEIKKAQQKRDEYEDKHL 717
Query: 120 GNFQLLLDEEYDENN 134
G F+ + E DE++
Sbjct: 718 GGFERIFPMEDDEDD 732
>sp|P0CAZ0|TTL3B_TETTS Tubulin glycylase 3B OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3B PE=1 SV=1
Length = 1160
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 17 RGKDIT-NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASP 75
G+D+ ++ + +++ SLKS + K+ E GYD +ID+ +PWLIE+N+SP
Sbjct: 1037 EGRDVFYEEIQPKLKQMVIQSLKSCQDQVGARKNSMEFIGYDFMIDSNYQPWLIEINSSP 1096
Query: 76 SLT-CTTVNDRILKYKLIDNILNIVMWNKYKKADGGAAGGEALNLGNFQLLLDEEYDENN 134
S+ T++ + +++ L D IV ++ KK + ++ G F+L+ E N
Sbjct: 1097 SMEYSTSITEELVQRVLQDTTKVIVDYSMAKK-----GTKKNVDTGGFKLIYKGEKQTKN 1151
Query: 135 VK 136
K
Sbjct: 1152 NK 1153
>sp|A6NNM8|TTL13_HUMAN Tubulin polyglutamylase TTLL13 OS=Homo sapiens GN=TTLL13 PE=2 SV=2
Length = 815
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
CFE G+DI++D++LKPWL+EVN SPS T + D+ +K L+ + + +V
Sbjct: 369 CFEILGFDILLDHKLKPWLLEVNHSPSFTTDSCLDQEVKDALLCDAMTLV 418
>sp|A4Q9E8|TTLL6_MOUSE Tubulin polyglutamylase TTLL6 OS=Mus musculus GN=Ttll6 PE=2 SV=1
Length = 822
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 5 KQIISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMANDKH-----------CFEC 53
+++ + +S + G D+ +++ I +I+ +L S ++ ++ H CFE
Sbjct: 284 RKLSTFNSYMKTHGYDV-EQIWRGIEDVIIKTLISAHPVIKHNYHTCFPSHTLNSACFEI 342
Query: 54 YGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
G+DI++D +LKPWL+EVN SPS + + D+ +K L+ + L ++
Sbjct: 343 LGFDILLDRKLKPWLLEVNHSPSFSTDSKLDKEVKDSLLYDALVLI 388
>sp|Q80UG8|TTLL4_MOUSE Tubulin polyglutamylase TTLL4 OS=Mus musculus GN=Ttll4 PE=2 SV=3
Length = 1193
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNI 98
C E +G+DI++D LKPW++EVN SPSL + D +K ++I ++LN+
Sbjct: 881 CHELFGFDIMLDENLKPWVLEVNISPSLHSNSPLDISIKGQMIRDLLNL 929
>sp|A8X9V4|TTLL4_CAEBR Tubulin polyglutamylase ttll-4 OS=Caenorhabditis briggsae GN=ttll-4
PE=3 SV=1
Length = 597
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNI 98
C+E +G DII+D KPWL+EVN SPSL T D +K L ++LN+
Sbjct: 411 CYELFGIDIILDEDYKPWLLEVNISPSLHSGTSLDVSVKAPLAKDVLNL 459
>sp|Q8N841|TTLL6_HUMAN Tubulin polyglutamylase TTLL6 OS=Homo sapiens GN=TTLL6 PE=1 SV=2
Length = 843
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 24 KLFTNISWLIVHSLKSVSYIMANDKH-----------CFECYGYDIIIDNQLKPWLIEVN 72
+++ +I +I+ +L S I+ ++ H CFE G+DI++D++LKPWL+EVN
Sbjct: 303 QIWRDIEDVIIKTLISAHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLEVN 362
Query: 73 ASPSLTCTTVNDRILKYKLIDNILNIV 99
SPS + + D+ +K L+ + L ++
Sbjct: 363 HSPSFSTDSRLDKEVKDGLLYDTLVLI 389
>sp|Q09647|TTLL4_CAEEL Tubulin polyglutamylase ttll-4 OS=Caenorhabditis elegans GN=ttll-4
PE=2 SV=3
Length = 601
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNI 98
C+E +G DII+D KPWL+EVN SPSL T D +K L ++LN+
Sbjct: 415 CYELFGIDIILDEDYKPWLLEVNISPSLHSGTPLDVSVKAPLAKDVLNL 463
>sp|Q23K29|TTL3D_TETTS Tubulin glycylase 3D OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3D PE=3 SV=1
Length = 1015
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 29 ISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILK 88
I W I+ S S + + K+ E +GYDI+ID PWL+EVN SPSL +T + L
Sbjct: 833 IKWSIL----SCSDTVESRKNSMELFGYDIMIDTNFNPWLLEVNTSPSLEYSTEITKKLV 888
Query: 89 YKLIDNILNIVM 100
++++++ +V+
Sbjct: 889 KQVLEDVAKVVV 900
>sp|Q23AS2|TTL3E_TETTS Tubulin glycylase 3E OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3E PE=3 SV=1
Length = 1394
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 8 ISHSSQVYPRGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPW 67
I + V P+ KD L++ ++K + + N K FE YG+DI++D PW
Sbjct: 1158 IDYQEDVKPKIKD-----------LVIETIKCAADKIVNRKKSFELYGFDILLDEYAHPW 1206
Query: 68 LIEVNASPS 76
L+EVN SP+
Sbjct: 1207 LLEVNLSPA 1215
>sp|A4Q9F0|TTLL7_MOUSE Tubulin polyglutamylase TTLL7 OS=Mus musculus GN=Ttll7 PE=1 SV=1
Length = 912
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 20 DITNKLFTNISWLIVHSLKSV------SYIM-------ANDKHCFECYGYDIIIDNQLKP 66
D+T K +++IS L+V +L +Y M ++ CFE G+DI++D +LKP
Sbjct: 287 DVT-KFWSDISELVVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEVLGFDILLDRKLKP 345
Query: 67 WLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99
WL+E+N +PS D +K ++ N L ++
Sbjct: 346 WLLEINRAPSFGTDQKIDYDVKRGVLLNALKLL 378
>sp|Q6ZT98|TTLL7_HUMAN Tubulin polyglutamylase TTLL7 OS=Homo sapiens GN=TTLL7 PE=2 SV=2
Length = 887
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 24 KLFTNISWLIVHSLKSV------SYIM-------ANDKHCFECYGYDIIIDNQLKPWLIE 70
K +++IS L+V +L +Y M ++ CFE G+DI++D +LKPWL+E
Sbjct: 290 KFWSDISELVVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEVLGFDILLDRKLKPWLLE 349
Query: 71 VNASPSLTCTTVNDRILKYKLIDNILNIV 99
+N +PS D +K ++ N L ++
Sbjct: 350 INRAPSFGTDQKIDYDVKRGVLLNALKLL 378
>sp|Q9Y4R7|TTLL3_HUMAN Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2
Length = 772
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 IVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTT 81
++H+L++ + K FE YG D + +PWLIE+NASP++ +T
Sbjct: 432 VIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPST 480
>sp|A6PVC2|TTLL8_HUMAN Protein monoglycylase TTLL8 OS=Homo sapiens GN=TTLL8 PE=2 SV=4
Length = 850
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 17 RGKDITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
RG + ++ ++ I H++K + K+ FE YG D ++ +PWLIE+N+SP+
Sbjct: 487 RGAVWGSVIYPSMKKAIAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPT 546
Query: 77 LTCTTVNDRILKYKLIDNILNIVMWNKYKKADGGAAGGEALNLGNFQLL 125
+ +T L ++ ++ + + A + ++GNF+LL
Sbjct: 547 MHPSTPVTAQLCAQVQEDTIKV-------------AVDRSCDIGNFELL 582
>sp|Q23TC2|TTL3A_TETTS Tubulin glycylase 3A OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3A PE=1 SV=1
Length = 875
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 18 GKDIT-NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76
GKD+ +K+ + + ++S+KS + ++ E YGYD ++D WL+E+N+SPS
Sbjct: 765 GKDMFYSKIQKEMMNIAINSIKSCKDSIEPRRNSLELYGYDFMVDQNYNTWLLEINSSPS 824
Query: 77 LTCTT-VNDRILKYKLID 93
+ +T V +++K L D
Sbjct: 825 MEYSTPVTTKLVKMGLED 842
>sp|A4Q9F1|TTLL8_MOUSE Protein monoglycylase TTLL8 OS=Mus musculus GN=Ttll8 PE=1 SV=1
Length = 832
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 48 KHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIVMWNKYKKA 107
K+ FE YG D I+ KPWLIE+N+SP++ +T L ++ ++ + +V+ K +
Sbjct: 561 KNSFELYGADFILGRDFKPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVVVDRKLDR- 619
Query: 108 DGGAAGGEALNLGNFQLL 125
++GNF+LL
Sbjct: 620 --------NCDIGNFELL 629
>sp|A4Q9E5|TTLL3_MOUSE Tubulin monoglycylase TTLL3 OS=Mus musculus GN=Ttll3 PE=1 SV=1
Length = 927
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 33 IVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTT 81
++H+L++ + K FE YG D + +PWLIE+NASP++ +T
Sbjct: 625 VIHALQTSQDNVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPST 673
>sp|Q14679|TTLL4_HUMAN Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2
Length = 1199
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNI 98
C E +G+DI++D LKPW++EVN SPSL ++ D +K ++I ++LN+
Sbjct: 886 CHELFGFDIMLDENLKPWVLEVNISPSLHSSSPLDISIKGQMIRDLLNL 934
>sp|Q9VM91|TTL3A_DROME Tubulin glycylase 3A OS=Drosophila melanogaster GN=TTLL3A PE=1 SV=1
Length = 992
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 24 KLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVN 83
++F + IV + + M + FE +G D +I PWLIE+N+SP L TT
Sbjct: 558 RIFPGMRKAIVGCMLASQENMDRRPNTFELFGADFMICENFYPWLIEINSSPDLGATTSV 617
Query: 84 DRILKYKLIDNILNIVMWNKYKKADGGAAGGEALNLGNFQL 124
+ + +++++ +V+ ++ D A LGNF+L
Sbjct: 618 TARMCPQCLEDVVKVVI---DRRTDPKA------ELGNFEL 649
>sp|Q1ECV4|TTLL3_DANRE Tubulin monoglycylase TTLL3 OS=Danio rerio GN=ttll3 PE=2 SV=1
Length = 771
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 33 IVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTT 81
++ +L + + K FE YG D ++ L+PWL+E+NASP++ +T
Sbjct: 488 VIQTLLTAQDSVEPRKASFELYGADFMLGRDLRPWLLEINASPTMAPST 536
>sp|Q2KVG4|DDL_BORA1 D-alanine--D-alanine ligase OS=Bordetella avium (strain 197N)
GN=ddl PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 14 VYPRGK-DITNKLFTNISW------LIVHSLKSVSYIMANDKHCFECYGY---DIIIDNQ 63
V P G D NK FT+++ L V + + I C G+ D I+D Q
Sbjct: 204 VAPDGNYDYQNKYFTDVTQYFCPADLPVGVAEQIEKIAVQAYRALGCEGWGRADFILDGQ 263
Query: 64 LKPWLIEVNASPSLT 78
+PWL+E+N SP +T
Sbjct: 264 NQPWLLEMNTSPGMT 278
>sp|P38584|TTL_BOVIN Tubulin--tyrosine ligase OS=Bos taurus GN=TTL PE=1 SV=1
Length = 377
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 21 ITNKLFTNISWLIVHSLKSVSYIMANDKH----CFECYGYDIIIDNQLKPWLIEVNASPS 76
+ + + I +I L SV ++ KH F+ +G+D ++D +LK WLIEVN +P+
Sbjct: 279 LESSILLQIKHIIRSCLMSVEPAIST-KHLPYQSFQLFGFDFMVDEELKVWLIEVNGAPA 337
Query: 77 LTCTTVNDRILKYKLIDNILNIVMWNKYKKADG 109
+ L +L I++I + + + D
Sbjct: 338 CA------QKLYAELCQGIVDIAIASVFPPPDA 364
>sp|A4Q9F4|TTL11_MOUSE Tubulin polyglutamylase TTLL11 OS=Mus musculus GN=Ttll11 PE=2 SV=1
Length = 727
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 50 CFECYGYDIIIDNQLKPWLIEVNASPSL 77
CF+ G+DI++ LKP L+EVNA+PS+
Sbjct: 418 CFQILGFDILLMKNLKPMLLEVNANPSM 445
>sp|Q9QXJ0|TTL_RAT Tubulin--tyrosine ligase OS=Rattus norvegicus GN=Ttl PE=2 SV=1
Length = 377
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 21 ITNKLFTNISWLIVHSLKSVSYIMANDKH----CFECYGYDIIIDNQLKPWLIEVNASPS 76
+ N + I +I L SV ++ KH F+ G+D ++D +LK WLIEVN +P+
Sbjct: 279 LENSILLQIKHIIRSCLMSVEPAIST-KHLPYQSFQLLGFDFMVDEELKVWLIEVNGAPA 337
Query: 77 LTCTTVNDRILKYKLIDNILNIVMWNKYKKAD 108
+ L +L I++I + + + D
Sbjct: 338 CA------QKLYAELCQGIVDIAISSVFPPPD 363
>sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2
Length = 377
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 51 FECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIVMWNKYKKAD 108
F+ +G+D ++D +LK WLIEVN +P+ + L +L I++I + + + D
Sbjct: 312 FQLFGFDFMVDEELKVWLIEVNGAPACA------QKLYAELCQGIVDIAISSVFPPPD 363
>sp|P38160|TTL_PIG Tubulin--tyrosine ligase OS=Sus scrofa GN=TTL PE=1 SV=1
Length = 379
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 51 FECYGYDIIIDNQLKPWLIEVNASPS 76
F+ +G+D ++D LK WLIEVN +P+
Sbjct: 312 FQLFGFDFMVDEDLKVWLIEVNGAPA 337
>sp|P38585|TTL_MOUSE Tubulin--tyrosine ligase OS=Mus musculus GN=Ttl PE=2 SV=2
Length = 377
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 21 ITNKLFTNISWLIVHSLKSVSYIMANDKH----CFECYGYDIIIDNQLKPWLIEVNASPS 76
+ + + I +I L SV ++ KH F+ G+D ++D +LK WLIEVN +P+
Sbjct: 279 LESSILLQIKHIIRSCLMSVEPAIST-KHLPYQSFQLLGFDFMVDEELKVWLIEVNGAPA 337
Query: 77 LTCTTVNDRILKYKLIDNILNIVMWNKYKKAD 108
+ L +L I++I + + + D
Sbjct: 338 CA------QKLYAELCQGIVDIAISSVFPPPD 363
>sp|Q9VM92|TTL3B_DROME Tubulin glycylase 3B OS=Drosophila melanogaster GN=TTLL3B PE=1 SV=2
Length = 756
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 KHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTT-VNDRILKYKLIDNILNIVMWNKYKK 106
++ FE YG D ++D P LIE+N++P L+ +T + RI L D I +V K
Sbjct: 567 QNAFELYGCDFMLDEHYNPILIEINSTPDLSPSTEITARICPMVLKDCIRVVVDLPKNPT 626
Query: 107 ADGG 110
A G
Sbjct: 627 AATG 630
>sp|Q4R7H0|TTL10_MACFA Protein polyglycylase TTLL10 OS=Macaca fascicularis GN=TTLL10 PE=2
SV=1
Length = 618
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 17/61 (27%)
Query: 31 WLIVHSLKSVSYIMANDKHCF-------EC-------YGYDIIIDNQLKPWLIEVNASPS 76
W+ K + IMA HCF EC G D +ID+ K WL+E+N++P+
Sbjct: 388 WVFTTLTKRMQQIMA---HCFLAAKSKLECKLGYFDLIGCDFLIDDNFKVWLLEMNSNPA 444
Query: 77 L 77
L
Sbjct: 445 L 445
>sp|A4Q9F3|TTL10_MOUSE Protein polyglycylase TTLL10 OS=Mus musculus GN=Ttll10 PE=1 SV=1
Length = 704
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 17/61 (27%)
Query: 31 WLIVHSLKSVSYIMANDKHCF-------EC-------YGYDIIIDNQLKPWLIEVNASPS 76
W+ K + IM+ HCF EC G D +ID K WL+E+NA+P+
Sbjct: 449 WVFTTFTKRMQQIMS---HCFLAVKSKLECKLGYFDLIGCDFLIDENFKVWLLEMNANPA 505
Query: 77 L 77
L
Sbjct: 506 L 506
>sp|Q5XI57|TTL10_RAT Protein polyglycylase TTLL10 OS=Rattus norvegicus GN=Ttll10 PE=2
SV=2
Length = 679
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 17/61 (27%)
Query: 31 WLIVHSLKSVSYIMANDKHCF-------EC-------YGYDIIIDNQLKPWLIEVNASPS 76
W+ K + IM+ HCF EC G D +ID K WL+E+N++P+
Sbjct: 452 WVFTTFTKRMQQIMS---HCFLAVKSKLECKLGYFDLIGCDFLIDENFKVWLLEMNSNPA 508
Query: 77 L 77
L
Sbjct: 509 L 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,017,718
Number of Sequences: 539616
Number of extensions: 2321760
Number of successful extensions: 5158
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 5087
Number of HSP's gapped (non-prelim): 84
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)