Query psy9332
Match_columns 148
No_of_seqs 127 out of 1094
Neff 6.2
Searched_HMMs 13730
Date Sat Aug 17 00:38:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9332.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9332hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e4ea2 d.142.1.1 (A:132-342) 98.4 8E-07 5.8E-11 65.4 9.5 69 23-99 135-209 (211)
2 d1ehia2 d.142.1.1 (A:135-362) 98.2 5.8E-06 4.3E-10 61.3 9.8 52 23-82 143-194 (228)
3 d1iowa2 d.142.1.1 (A:97-306) D 98.0 1.4E-05 1E-09 58.4 9.4 53 23-83 135-187 (210)
4 d1i7na2 d.142.1.3 (A:215-420) 97.6 4.3E-05 3.1E-09 56.5 6.2 50 49-98 152-203 (206)
5 d1vkza3 d.142.1.2 (A:94-313) G 97.2 0.00041 3E-08 51.0 7.2 76 23-102 137-212 (220)
6 d1uc8a2 d.142.1.7 (A:89-280) L 96.6 0.0019 1.4E-07 45.4 5.9 28 51-79 143-170 (192)
7 d2r7ka2 d.142.1.9 (A:124-361) 96.4 0.0026 1.9E-07 47.3 6.0 51 24-76 143-193 (238)
8 d1gsoa3 d.142.1.2 (A:104-327) 96.4 0.0019 1.4E-07 48.6 5.0 51 49-99 162-212 (224)
9 d1ulza3 d.142.1.2 (A:115-328) 96.3 0.0066 4.8E-07 44.2 7.3 71 23-103 134-205 (214)
10 d2r85a2 d.142.1.9 (A:100-334) 96.2 0.0048 3.5E-07 45.2 6.1 49 24-75 141-189 (235)
11 d1w96a3 d.142.1.2 (A:184-450) 95.3 0.02 1.4E-06 43.3 6.8 69 23-101 156-226 (267)
12 d2j9ga3 d.142.1.2 (A:115-330) 94.0 0.066 4.8E-06 39.0 6.6 69 23-102 136-205 (216)
13 d1kjqa3 d.142.1.2 (A:113-318) 92.2 0.18 1.3E-05 35.0 6.5 47 23-78 129-175 (206)
14 d3etja3 d.142.1.2 (A:79-276) N 90.9 0.31 2.2E-05 33.5 6.5 48 23-79 122-169 (198)
15 d1a9xa6 d.142.1.2 (A:677-935) 90.8 0.32 2.4E-05 36.7 7.0 49 22-79 126-174 (259)
16 d1a9xa5 d.142.1.2 (A:128-402) 70.6 6.3 0.00046 28.9 7.0 70 22-100 130-201 (275)
17 d2io8a3 d.142.1.8 (A:201-378,A 69.9 1.2 8.8E-05 34.5 2.6 20 53-73 113-133 (297)
18 d1gsaa2 d.142.1.1 (A:123-314) 52.8 3.9 0.00028 28.3 2.6 23 51-78 145-169 (192)
19 d1r89a3 d.58.16.2 (A:258-437) 34.0 22 0.0016 24.9 4.2 51 21-77 32-84 (180)
20 d1dv5a_ a.28.1.3 (A:) apo-D-al 26.7 17 0.0012 21.5 2.1 35 23-57 3-37 (80)
21 d2ja9a2 d.51.1.1 (A:152-236) R 25.5 14 0.001 22.9 1.5 15 54-68 31-45 (85)
22 d1we0a1 c.47.1.10 (A:1-166) Al 22.6 42 0.003 22.2 3.8 21 57-77 122-142 (166)
No 1
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}
Probab=98.40 E-value=8e-07 Score=65.43 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcchHHH------HHHHHHHHH
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRIL------KYKLIDNIL 96 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~~~~l------k~~ll~d~l 96 (148)
+.+..++++++.+++.+. ++....++||++|.++++|++|||+.|++...+.+.... .++|++.++
T Consensus 135 ~~~~~~i~~~a~~~~~~l--------g~~g~~~id~~~~~~g~~~viEiN~~pg~~~~s~~~~~~~~~G~~~~~li~~iv 206 (211)
T d1e4ea2 135 AEERGRIQETVKKIYKTL--------GCRGLARVDMFLQDNGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 206 (211)
T ss_dssp HHHHHHHHHHHHHHHHHT--------TCEEEEEEEEEECTTCCEEEEEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHhh--------ccCCeeEEEEEEcCCCCEEEEEEeCCCCCCCccHHHHHHHHcCCCHHHHHHHHH
Confidence 567778888888776654 345678999999999999999999999998877554432 246677666
Q ss_pred hhc
Q psy9332 97 NIV 99 (148)
Q Consensus 97 ~lv 99 (148)
++.
T Consensus 207 ~~a 209 (211)
T d1e4ea2 207 VLA 209 (211)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 2
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=98.17 E-value=5.8e-06 Score=61.30 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTV 82 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~ 82 (148)
..+..++++++.+++.+. +|-...++||++|.++.+|+||||+.|+++..+-
T Consensus 143 ~~~~~~i~~~~~~~~~~l--------g~~~~~~iD~~~d~~g~~~~lEvN~~Pg~~~~s~ 194 (228)
T d1ehia2 143 PEVTKEVKQMALDAYKVL--------NLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSL 194 (228)
T ss_dssp HHHHHHHHHHHHHHHHHT--------TCCEEEEEEEEECTTCCEEEEEEESSCCCSTTCG
T ss_pred HHHHHHHHHHHHHHHhhh--------hcCCeeeEEEEEcCCCcEEEEEecCCCCCCcccH
Confidence 567777777777665543 2323445999999999999999999999987653
No 3
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=98.03 E-value=1.4e-05 Score=58.37 Aligned_cols=53 Identities=21% Similarity=0.384 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVN 83 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~ 83 (148)
..+-.++++++.+++.+.. +-..+.+||++|.+|++|+||||+.|++...+-+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~--------~~g~~~vdf~~d~~g~~~~lEiN~~pg~~~~s~~ 187 (210)
T d1iowa2 135 ASQEANLQALVLKAWTTLG--------CKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLV 187 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHT--------CCSEEEEEEEECTTSCEEEEEEESSCCCSTTCHH
T ss_pred cccchhHHHHHHHHHHHhC--------CCCceEEEEEECCCCCEEEEEEeCCCCCCCccHH
Confidence 4567777777777665533 2345679999999999999999999999876643
No 4
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.63 E-value=4.3e-05 Score=56.52 Aligned_cols=50 Identities=18% Similarity=0.164 Sum_probs=34.8
Q ss_pred CcceeeeeeEEEeCCCCcEEEeeccCCCCCcCC--cchHHHHHHHHHHHHhh
Q psy9332 49 HCFECYGYDIIIDNQLKPWLIEVNASPSLTCTT--VNDRILKYKLIDNILNI 98 (148)
Q Consensus 49 ~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~--~~~~~lk~~ll~d~l~l 98 (148)
.+..+.|+||++|.+|++|++|||++|...... ..+......++..-++.
T Consensus 152 ~~~~~~gvD~~~~~dG~~yvlEvN~~~~~~~~~~~~~~~~~i~d~v~~~~~~ 203 (206)
T d1i7na2 152 GGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKMNQ 203 (206)
T ss_dssp GCCSEEEEEEEEETTSCEEEEEEECTTCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEEEcCCCCEEEEEEcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999988543332 23344455555554443
No 5
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=97.23 E-value=0.00041 Score=50.98 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcchHHHHHHHHHHHHhhcccc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIVMWN 102 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~~~~lk~~ll~d~l~lv~~~ 102 (148)
.........++..+..++... ...+...+.+||++++++ |++||+|+.|+....+.+...+...+++-+++++..+
T Consensus 137 ~~~~~~~~~~~~~~~~a~~~~---~~~~~G~~~~d~~~~~~g-p~viEiN~R~G~~~~~~~~~~~~~dl~~~~l~~a~g~ 212 (220)
T d1vkza3 137 SDTIKKIEELFDKTLWGVEKE---GYAYRGFLYLGLMLHDGD-PYILEYNVRLGDPETEVIVTLNPEGFVNAVLEGYRGG 212 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEEEEEETTE-EEEEEEESSCCTTHHHHHHHHCHHHHHHHHHHHHHTS
T ss_pred chhhHHHHHHHHHHHHHHhhh---hhhhhccceeEEEeeCCC-EEEEEEECCCCCCcceeeeecccccHHHHHHHHHcCC
Confidence 456666777776666554332 235677888999999777 9999999999742222222333344555555555433
No 6
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]}
Probab=96.59 E-value=0.0019 Score=45.42 Aligned_cols=28 Identities=14% Similarity=0.068 Sum_probs=23.1
Q ss_pred ceeeeeeEEEeCCCCcEEEeeccCCCCCc
Q psy9332 51 FECYGYDIIIDNQLKPWLIEVNASPSLTC 79 (148)
Q Consensus 51 FEl~G~D~~iD~~~kpwLLEVN~~P~l~~ 79 (148)
....|+||+.|++ .|++||||+.|++..
T Consensus 143 ~g~~~vD~~~~~~-~~~vlEiN~r~g~~~ 170 (192)
T d1uc8a2 143 GGVVAVDLFESER-GLLVNEVNHTMEFKN 170 (192)
T ss_dssp CSEEEEEEEEETT-EEEEEEEETTCCCTT
T ss_pred ccccceEEEecCC-CEEEEEEcCCCchhH
Confidence 3567899999975 599999999998754
No 7
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=96.42 E-value=0.0026 Score=47.31 Aligned_cols=51 Identities=8% Similarity=0.084 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCC
Q psy9332 24 KLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPS 76 (148)
Q Consensus 24 ~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~ 76 (148)
.+.+++++++.+++.++..... .++...+++||++|.+++++++|||..++
T Consensus 143 ~~~~~i~~~~~~i~~~l~~~~~--~~~~G~~~ve~~~~~dg~~~viEinpR~~ 193 (238)
T d2r7ka2 143 SLLPQVFEMGDKLVAKAKELVP--PGMIGPFCLQSLCNENLELVVFEMSARVD 193 (238)
T ss_dssp GGHHHHHHHHHHHHHHHHHHST--TCCCEEEEEEEEECTTSCEEEEEEESSBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--cCccccccHhhHhhcCCCEEEEEEECCCC
Confidence 4667777777777666544332 46778899999999999999999999743
No 8
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}
Probab=96.38 E-value=0.0019 Score=48.56 Aligned_cols=51 Identities=22% Similarity=0.085 Sum_probs=32.6
Q ss_pred CcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcchHHHHHHHHHHHHhhc
Q psy9332 49 HCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILKYKLIDNILNIV 99 (148)
Q Consensus 49 ~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~~~~lk~~ll~d~l~lv 99 (148)
.+-..+.++||++.+|+|++||+|+.++-..+..+...++..+++-+++.+
T Consensus 162 ~~~G~l~~~~mit~~G~p~vlE~N~R~Gdpe~~~il~~l~~dl~e~~~~~~ 212 (224)
T d1gsoa3 162 TYTGFLYAGLMIDKQGNPKVIEFNCRFGDLETQPIMLRMKSDLVELCLAAC 212 (224)
T ss_dssp CCEEEEEEEEEEETTCCEEEEEEESSCCTTTHHHHHHHBCSCHHHHHHHHH
T ss_pred eeeeeeccceeeeeCCCEEEEEEecCCCCCcceeehhhhcCCHHHHHHHHH
Confidence 344667789999999999999999988643333333333333444444443
No 9
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=96.25 E-value=0.0066 Score=44.21 Aligned_cols=71 Identities=10% Similarity=0.155 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcchHHH-HHHHHHHHHhhccc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRIL-KYKLIDNILNIVMW 101 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~~~~l-k~~ll~d~l~lv~~ 101 (148)
.....++.+++.+.+.+. ++...+.+||++|.++.+|+||+|..|+-+ ..+.... --.+...+++++..
T Consensus 134 ~e~~~~~~~~~~~~~~~l--------g~~G~~~vef~~~~dg~~~~iEin~R~~~~--~~~~~~a~Gidl~~~~v~~alG 203 (214)
T d1ulza3 134 PEKREYYGNIVTKAAKEI--------GYYNAGTMEFIADQEGNLYFIEMNTRIQVE--HPVSEMVTGIDIVKWQIKIAAG 203 (214)
T ss_dssp HHHHHHHHHHHHHHHHHT--------TCCEEEEEEEEECTTCCEEEEEEECSCCTT--HHHHHHHHCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHc--------CCccceEEEEEECCCCCEEEEEecCcCCCc--hhhhHHHHCcCHHHHHHHHHCC
Confidence 456777777777776554 344567789999999999999999999743 2222221 12556677777765
Q ss_pred cc
Q psy9332 102 NK 103 (148)
Q Consensus 102 ~~ 103 (148)
.+
T Consensus 204 ~~ 205 (214)
T d1ulza3 204 EP 205 (214)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 10
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.15 E-value=0.0048 Score=45.20 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCC
Q psy9332 24 KLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASP 75 (148)
Q Consensus 24 ~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P 75 (148)
.+...+.+++.+++.++...+. .+-..+++||++|.+++++++|||..+
T Consensus 141 ~~~~~~~e~~~~~~~~l~~~~~---~~~G~~~ve~~~~~dg~~~viEiNpR~ 189 (235)
T d2r85a2 141 SLLMDVIEAGERVVKAAEELMG---GLWGPFCLEGVFTPDLEFVVFEISARI 189 (235)
T ss_dssp GGHHHHHHHHHHHHHHHHHHSS---CCCEEEEEEEEECTTSCEEEEEEECSC
T ss_pred hHHHHHHHHHHHHHHHHHHhcC---CceeeeeEEEEEcCCCCEEEEEEeCCC
Confidence 3455666666666555444443 566678899999999999999999874
No 11
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.31 E-value=0.02 Score=43.31 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEe-CCCCcEEEeeccCCCCCcCCcchHHH-HHHHHHHHHhhcc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIID-NQLKPWLIEVNASPSLTCTTVNDRIL-KYKLIDNILNIVM 100 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD-~~~kpwLLEVN~~P~l~~~~~~~~~l-k~~ll~d~l~lv~ 100 (148)
+....++.++..+.+.+. +|.....+||++| +++++|+||||+.++- ++++.... =-.++.-+++++.
T Consensus 156 ~~~~~~~~~~a~~~~~~l--------g~~g~~~vd~~~~~~~g~~yviEiNpR~~~--~~~~~~~atGvdl~~~~i~~a~ 225 (267)
T d1w96a3 156 AETFHEMEKAAVRLGKLV--------GYVSAGTVEYLYSHDDGKFYFLELNPRLQV--EHPTTEMVSGVNLPAAQLQIAM 225 (267)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCCEEEEEEEEECTTTCCEEEEEEECSCCT--TTHHHHHHHCCCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHh--------CCccccceeeeeeCCCCcEEEEEecccccc--ceeEEeeeeCCCHHHHHHHHHC
Confidence 344555555555554432 5667788999999 5799999999999754 34443332 1235566666666
Q ss_pred c
Q psy9332 101 W 101 (148)
Q Consensus 101 ~ 101 (148)
.
T Consensus 226 G 226 (267)
T d1w96a3 226 G 226 (267)
T ss_dssp T
T ss_pred C
Confidence 4
No 12
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=94.00 E-value=0.066 Score=38.99 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCcCCcchHHHH-HHHHHHHHhhccc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTCTTVNDRILK-YKLIDNILNIVMW 101 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~~~~~~~~lk-~~ll~d~l~lv~~ 101 (148)
+....+|..+..+.... -++...+.+||++| +++|++||||+.|+.+ .++..... -.++.-+++++..
T Consensus 136 ~~~~~~~~~~~~~~~~~--------~~~~G~~~~e~~~~-~~~~~viEvnpR~~~~--~~~~~~~tGvdlv~~~i~~alG 204 (216)
T d2j9ga3 136 PELRRYIGERCAKACVD--------IGYRGAGTFEFLFE-NGEFYFIEMNTRIQVE--HPVTEMITGVDLIKEQLRIAAG 204 (216)
T ss_dssp HHHHHHHHHHHHHHHHH--------TTCEEEEEEEEEEE-TTEEEEEEEECSCCTT--HHHHHHHHCCCHHHHHHHHHTT
T ss_pred chhhhhhHHHHHHHHHH--------cCccCcceeEeEec-CCeEEEEeecCccccc--hhhhhHHHCcCHHHHHHHHHCC
Confidence 45566666666554333 23445677999999 7899999999999644 23333322 2466666666664
Q ss_pred c
Q psy9332 102 N 102 (148)
Q Consensus 102 ~ 102 (148)
.
T Consensus 205 ~ 205 (216)
T d2j9ga3 205 Q 205 (216)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}
Probab=92.25 E-value=0.18 Score=35.05 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCC
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLT 78 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~ 78 (148)
.....++.++...+..+. ++...+++||+++++ .++++|||..|+-+
T Consensus 129 ~~~~~~~~~~~~~~~~~~--------~~~g~~~~e~~~~~~-~~~viEin~R~~~~ 175 (206)
T d1kjqa3 129 PLALERAQEIARKVVLAL--------GGYGLFGVELFVCGD-EVIFSEVSPRPHDT 175 (206)
T ss_dssp HHHHHHHHHHHHHHHHHH--------CSSEEEEEEEEEETT-EEEEEEEESSCCGG
T ss_pred HHHHHHHHHHHHhhhhhh--------hceeeeccccccccC-CceEEEeecCcccc
Confidence 445666666655544332 345678899999877 58999999999754
No 14
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=90.91 E-value=0.31 Score=33.55 Aligned_cols=48 Identities=4% Similarity=0.016 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCc
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTC 79 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~ 79 (148)
+.+..++..+....+.+. .+...+.+||+++.+ .++++|||..|+-+.
T Consensus 122 ~~~~~~~~~~~~~~~~~l--------~~~g~~~~~~~~~~~-~~~v~Evn~Rp~~~g 169 (198)
T d3etja3 122 AQQQARAEEMLSAIMQEL--------GYVGVMAMECFVTPQ-GLLINELAPRVHNSG 169 (198)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCCEEEEEEEEEETT-EEEEEEEESSCCGGG
T ss_pred cchhhhhhhhhhHHHHhh--------hhcccchhheeecCC-cEEEEEEECCccccc
Confidence 456666666666555442 234567889999976 799999999997543
No 15
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=90.77 E-value=0.32 Score=36.71 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEEEeeccCCCCCc
Q psy9332 22 TNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWLIEVNASPSLTC 79 (148)
Q Consensus 22 ~~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwLLEVN~~P~l~~ 79 (148)
.+.+..+|++++.+...+. ++-.+++++|+++ +.++|+||||..++-++
T Consensus 126 ~~~~~~~l~~~a~kia~~l--------~~~G~~~vef~v~-~~~~y~iEvNpR~~~~~ 174 (259)
T d1a9xa6 126 SQEIQDVMRQQVQKLAFEL--------QVRGLMNVQFAVK-NNEVYLIEVNPRAARTV 174 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHT--------TCCEEEEEEEEEC-SSCEEEEEEECSCCTTH
T ss_pred CHHHHHHHHHHHHHHHHHh--------hhccceeEEEEEE-CCEEEEEEcccccCCce
Confidence 3577788887777765543 4567788999996 56899999999888653
No 16
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=70.55 E-value=6.3 Score=28.93 Aligned_cols=70 Identities=10% Similarity=0.093 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEe-CCCCcEEEeeccCCCCCcCCcchHHH-HHHHHHHHHhhc
Q psy9332 22 TNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIID-NQLKPWLIEVNASPSLTCTTVNDRIL-KYKLIDNILNIV 99 (148)
Q Consensus 22 ~~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD-~~~kpwLLEVN~~P~l~~~~~~~~~l-k~~ll~d~l~lv 99 (148)
.+....+|.+++.+.+.+. .- ....+-+.|++| +++++|++|+|..++ .++++...+ --.++.-.++++
T Consensus 130 ~~~~~~~i~~~a~~i~~~l----g~---~~G~~~~ef~~~~~~~~~~~iE~npR~~--~~~~~~~~~tgidlv~~~~~~a 200 (275)
T d1a9xa5 130 TDKEYQIMRNASMAVLREI----GV---ETGGSNVQFAVNPKNGRLIVIEMNPRVS--RSSALASKATGFPIAKVAAKLA 200 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHH----TC---CSEEEEEEEEECTTTCCEEEEEEESSCC--HHHHHHHHHHSCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHc----Cc---eECceEEEEEEeCCCCEEEEEEecCCCC--ceehhhhHhhCCCHHHHHHHHH
Confidence 3566777777777665443 21 123344778887 468999999996544 444444321 113444455555
Q ss_pred c
Q psy9332 100 M 100 (148)
Q Consensus 100 ~ 100 (148)
.
T Consensus 201 ~ 201 (275)
T d1a9xa5 201 V 201 (275)
T ss_dssp T
T ss_pred c
Confidence 4
No 17
>d2io8a3 d.142.1.8 (A:201-378,A:497-615) Glutathionylspermidine synthase, synthetase domain {Escherichia coli [TaxId: 562]}
Probab=69.88 E-value=1.2 Score=34.52 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=18.3
Q ss_pred eee-eeEEEeCCCCcEEEeecc
Q psy9332 53 CYG-YDIIIDNQLKPWLIEVNA 73 (148)
Q Consensus 53 l~G-~D~~iD~~~kpwLLEVN~ 73 (148)
++| |||.+|.++ +-|+|.|+
T Consensus 113 ~yGRfDfa~dg~g-~KllEyNA 133 (297)
T d2io8a3 113 ITGRMDFCMDERG-LKVYEYNA 133 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEC
T ss_pred eeeeeEEEEcCCC-ceEEEecC
Confidence 467 999999999 99999998
No 18
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]}
Probab=52.78 E-value=3.9 Score=28.33 Aligned_cols=23 Identities=30% Similarity=0.459 Sum_probs=16.2
Q ss_pred ceeeeeeEEEeCCCCcEEEeeccC--CCCC
Q psy9332 51 FECYGYDIIIDNQLKPWLIEVNAS--PSLT 78 (148)
Q Consensus 51 FEl~G~D~~iD~~~kpwLLEVN~~--P~l~ 78 (148)
...-|+|++ ..+++|||.+ |++.
T Consensus 145 l~~~gVDii-----~~~~~EiNv~s~~g~~ 169 (192)
T d1gsaa2 145 LIFVGLDII-----GDRLTEINVTSPTCIR 169 (192)
T ss_dssp CCEEEEEEE-----TTEEEEEECSSCCCHH
T ss_pred CceEEEEee-----CCeEEEEEcCCcHHHH
Confidence 345789998 2388999954 6664
No 19
>d1r89a3 d.58.16.2 (A:258-437) tRNA nucleotidyltransferase, C-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=34.00 E-value=22 Score=24.89 Aligned_cols=51 Identities=6% Similarity=0.099 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeeeEEEeCCCCcEE--EeeccCCCC
Q psy9332 21 ITNKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYDIIIDNQLKPWL--IEVNASPSL 77 (148)
Q Consensus 21 ~~~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D~~iD~~~kpwL--LEVN~~P~l 77 (148)
+.+.||+||+.+.... ...+. ...|..++.+.-.|++--..+ +|+-..|..
T Consensus 32 vdDil~pQl~R~~~sl----~~~Le--~~GF~Vlrs~~~~de~~~~ll~El~~~~lp~v 84 (180)
T d1r89a3 32 VDDNLYPQLERASRKI----FEFLE--RENFMPLRSAFKASEEFCYLLFECQIKEISRV 84 (180)
T ss_dssp CHHHHHHHHHHHHHHH----HHHHH--HTTCCEEEEEEEECSSEEEEEEEESCSCCCSE
T ss_pred CccchhHHHHHHHHHH----HHHHH--HCCCEEEEEEEEecCCEEEEEEEEeeccccCc
Confidence 3578999999776554 44455 478999999988887622333 444444543
No 20
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}
Probab=26.71 E-value=17 Score=21.45 Aligned_cols=35 Identities=14% Similarity=-0.008 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHchhhhcCCCCcceeeeee
Q psy9332 23 NKLFTNISWLIVHSLKSVSYIMANDKHCFECYGYD 57 (148)
Q Consensus 23 ~~i~~~i~~ii~~t~~a~~~~l~~~~~~FEl~G~D 57 (148)
+.|..++.+++.+.+-.-...+....+.|+..|+|
T Consensus 3 e~I~~~v~~il~~~l~~~~~~i~~d~~l~e~gglD 37 (80)
T d1dv5a_ 3 EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLD 37 (80)
T ss_dssp HHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCC
T ss_pred HHHHHHHHHHHHHHhccchhhcCCCccccccCCCC
Confidence 45667777777765433233455666777866766
No 21
>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=25.53 E-value=14 Score=22.86 Aligned_cols=15 Identities=20% Similarity=0.470 Sum_probs=13.0
Q ss_pred eeeeEEEeCCCCcEE
Q psy9332 54 YGYDIIIDNQLKPWL 68 (148)
Q Consensus 54 ~G~D~~iD~~~kpwL 68 (148)
++|.+.+-.||++|+
T Consensus 31 ~~~eI~VG~NGrIWi 45 (85)
T d2ja9a2 31 TKFEVAIGLNGKIWV 45 (85)
T ss_dssp CCCEEEEETTTEEEE
T ss_pred cCceEEEecCcEEEE
Confidence 456789999999998
No 22
>d1we0a1 c.47.1.10 (A:1-166) Alkyl hydroperoxide reductase AhpC {Amphibacillus xylanus [TaxId: 1449]}
Probab=22.61 E-value=42 Score=22.24 Aligned_cols=21 Identities=33% Similarity=0.172 Sum_probs=17.6
Q ss_pred eEEEeCCCCcEEEeeccCCCC
Q psy9332 57 DIIIDNQLKPWLIEVNASPSL 77 (148)
Q Consensus 57 D~~iD~~~kpwLLEVN~~P~l 77 (148)
-|+||.+|++--+++|..|--
T Consensus 122 tfvID~~G~I~~~~i~~~~~~ 142 (166)
T d1we0a1 122 TFIIDPDGVIQAIEINADGIG 142 (166)
T ss_dssp EEEECTTSBEEEEEEECTTSC
T ss_pred EEEECCCCcEEEEEEcCCCCC
Confidence 489999999999999876643
Done!