BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9334
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 48/53 (90%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+LYPKI+FE+MI+DNC MQ+V NP+QFDV+VMPNLYGNI+DNLA+ + G
Sbjct: 234 EEVAELYPKIKFEKMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286
>sp|Q68FX0|IDH3B_RAT Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Rattus norvegicus GN=Idh3B PE=1 SV=1
Length = 385
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+LYPKI+FE MI+DNC MQ+V NP+QFDV+VMPNLYGNI+DNLA+ + G
Sbjct: 234 EEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286
>sp|O43837|IDH3B_HUMAN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo
sapiens GN=IDH3B PE=1 SV=2
Length = 385
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+LYPKI+FE MI+DNC MQ+V NP+QFDV+VMPNLYGNI+DNLA+ + G
Sbjct: 234 EEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286
>sp|Q5RBT4|IDH3B_PONAB Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo
abelii GN=IDH3B PE=2 SV=1
Length = 385
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+LYPKI+FE MI+DNC MQ+V NP+QFDV+VMPNLYGNI+DNLA+ + G
Sbjct: 234 EEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286
>sp|Q28479|IDH3B_MACFA Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Macaca fascicularis GN=IDH3B PE=2 SV=2
Length = 385
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+LYPKI+FE MI+DNC MQ+V NP+QFDV+VMPNLYGNI+DNLA+ + G
Sbjct: 234 EEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVG 286
>sp|Q93353|IDH3B_CAEEL Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C37E2.1 PE=3 SV=1
Length = 379
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 44/53 (83%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +AK YPKIQFE MI+DN MQ+VS P QFDVMVMPNLYGNI+DNLA+ + G
Sbjct: 231 EGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGLVG 283
>sp|Q58CP0|IDH3G_BOVIN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos
taurus GN=IDH3G PE=2 SV=1
Length = 392
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A YP+I FE MIVDN TMQ+VS P QFDVMVMPNLYGNIV+N+ + + G
Sbjct: 236 REVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 288
>sp|P51553|IDH3G_HUMAN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo
sapiens GN=IDH3G PE=1 SV=1
Length = 393
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A YP+I FE MIVDN TMQ+VS P QFDVMVMPNLYGNIV+N+ + + G
Sbjct: 237 REVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 289
>sp|P41564|IDH3G_MACFA Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1
Length = 355
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A YP+I FE MIVDN TMQ+VS P QFDVMVMPNLYGNIV+N+ + + G
Sbjct: 199 REVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 251
>sp|P41565|IDHG1_RAT Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Rattus norvegicus GN=Idh3g PE=2 SV=2
Length = 393
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A YP+I F+ MIVDN TMQ+VS P QFDVMVMPNLYGNIV+N+ + + G
Sbjct: 237 REVAARYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 289
>sp|P70404|IDHG1_MOUSE Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Mus musculus GN=Idh3g PE=1 SV=1
Length = 393
Score = 75.9 bits (185), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A YP+I F+ MIVDN TMQ+VS P QFDVMVMPNLYGNIV+N+ + + G
Sbjct: 237 REVAAHYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVG 289
>sp|Q54B68|IDHB_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial
OS=Dictyostelium discoideum GN=idhB PE=3 SV=1
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+AK YP+I+FE I+DNC MQ+V +P Q+DVMV PNLYGNIV N+ + + G
Sbjct: 212 IAKEYPEIKFENTIIDNCCMQLVKSPEQYDVMVTPNLYGNIVSNIGAALVG 262
>sp|P93032|IDH2_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial
OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2
Length = 367
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
Q +AK YP I + ++IVDNC MQ+V+ P QFDVMV PNLYGN+V N A+ I G
Sbjct: 217 QEVAKKYPSIAYNEIIVDNCCMQLVARPEQFDVMVTPNLYGNLVANTAAGIAG 269
>sp|Q8LFC0|IDH1_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2
Length = 367
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +AK YP I + ++IVDNC MQ+V+ P QFDVMV PNLYGN+V N A+ I G
Sbjct: 217 REVAKKYPSITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAG 269
>sp|Q8BPC6|IDHG2_MOUSE Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Mus musculus PE=1 SV=1
Length = 396
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+A YP+I E MI+DN TMQ+VS P QFDVMVMPNLYGNI++++ + + G
Sbjct: 236 VAAHYPQITLESMIIDNTTMQLVSKPQQFDVMVMPNLYGNIINSICTGLVG 286
>sp|O81796|IDH3_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial
OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +AK Y I + ++IVDNC MQ+V+ P QFDVMV PNLYGN++ N A+ I G
Sbjct: 218 REVAKHYSGITYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLIANTAAGIAG 270
>sp|P29696|LEU3_SOLTU 3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 357
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 42/53 (79%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+ YP+I++E++++DNC M +V NP FDV+VMPNLYG+I+ +L + + G
Sbjct: 221 REVAEKYPEIKYEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIG 273
>sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1
Length = 374
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+ +A+ YP+I +E++++DNC M +V NP FDV+VMPNLYG+I+ +L + + G
Sbjct: 228 REVAEKYPEITYEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVG 280
>sp|Q4QQT5|IDHG2_RAT Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Rattus norvegicus PE=2 SV=1
Length = 395
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+A YP+I E MI+DN MQ+VS P QFDVM+MPNLYGNI++++ + + G
Sbjct: 236 VAAHYPQITLESMIIDNTAMQLVSKPQQFDVMLMPNLYGNIINSVCTGLVG 286
>sp|O13302|IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Ajellomyces capsulatus GN=IDH1 PE=2 SV=1
Length = 388
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+A+ YP ++ MIVDN +MQ V+ P QFDVMVMPNLYG I+ N+ + + G
Sbjct: 240 VAESYPTLETNDMIVDNASMQAVARPQQFDVMVMPNLYGGILSNVGAALVG 290
>sp|Q8LG77|IDH6_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial
OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2
Length = 374
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+A YP+I +E++++DNC M +V NP FDV+VMPNLYG+I+ +L + + G
Sbjct: 230 VAAKYPEIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVG 280
>sp|O94229|IDH1_KLULA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH1 PE=3
SV=1
Length = 361
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 15 AKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
A YP++ + +IVDN +MQ V+ PHQFDV+V PNLYG+I+ N+ S + G
Sbjct: 215 ANEYPELDVKNIIVDNASMQAVAKPHQFDVLVTPNLYGSILGNIGSALIG 264
>sp|Q5FUG5|LEU3_GLUOX 3-isopropylmalate dehydrogenase OS=Gluconobacter oxydans (strain
621H) GN=leuB PE=3 SV=1
Length = 369
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 18 YPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
YP +Q M+ DNC MQ+V +P+QFDV+V NL+G+I+ +LAS + GS
Sbjct: 216 YPDVQLSHMLADNCAMQLVRDPNQFDVIVTGNLFGDILSDLASMLTGS 263
>sp|Q8RDK0|LEU3_THETN 3-isopropylmalate dehydrogenase OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=leuB PE=3 SV=1
Length = 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +AK YP+++ M VDNC MQ+V NP QFDV++ N++G+I+ + A+ I GS
Sbjct: 205 EEVAKRYPEVELNHMYVDNCAMQLVKNPFQFDVILTNNMFGDILSDEAAQIVGS 258
>sp|Q24XT2|LEU3_DESHY 3-isopropylmalate dehydrogenase OS=Desulfitobacterium hafniense
(strain Y51) GN=leuB PE=3 SV=1
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 10 LGQTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +AK YP+++ M VDN MQ+V NP QFDV+V N++G+I+ +LAS + GS
Sbjct: 201 IANELAKEYPEVELTHMYVDNAAMQLVRNPKQFDVIVTENMFGDILTDLASMLGGS 256
>sp|Q7NUC2|LEU3_CHRVO 3-isopropylmalate dehydrogenase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=leuB PE=3 SV=1
Length = 354
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+AK YP+++ M VDN MQ+V NP QFDVMV N++G+I+ + AS + GS
Sbjct: 206 VAKEYPQVELSHMYVDNAAMQLVRNPKQFDVMVTGNIFGDILSDEASMLTGS 257
>sp|Q31HI0|LEU3_THICR 3-isopropylmalate dehydrogenase OS=Thiomicrospira crunogena (strain
XCL-2) GN=leuB PE=3 SV=1
Length = 357
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+AK YP+++ + M VDN MQ+V NP QFDVMV N++G+I+ + AS + GS
Sbjct: 209 VAKEYPEVEVQHMYVDNAAMQLVLNPKQFDVMVTGNMFGDILSDEASMLTGS 260
>sp|Q55BI2|IDHA_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial
OS=Dictyostelium discoideum GN=idhA PE=3 SV=1
Length = 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 18 YPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
YP I++E++ +DN MQ+V +P+Q DVMV+PNLYG+IV +L + + G
Sbjct: 208 YPSIKYEELTIDNNCMQLVLDPNQMDVMVLPNLYGDIVSDLCAGLIG 254
>sp|P12010|LEU3_BACCO 3-isopropylmalate dehydrogenase OS=Bacillus coagulans GN=leuB PE=1
SV=1
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 10 LGQTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ + AK YP ++ M+VD+ +MQ+++NP QFDV+V N++G+I+ + AS I GS
Sbjct: 203 IAEETAKKYPDVELSHMLVDSTSMQLIANPGQFDVIVTENMFGDILSDEASVITGS 258
>sp|O13696|IDH1_SCHPO Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh1 PE=1 SV=1
Length = 356
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
+A Y I + +IVDN +MQ VS P QFDV+VMPNLYG+I+ N+ S + G
Sbjct: 209 VANGYDAITPKDLIVDNASMQAVSRPQQFDVLVMPNLYGSILSNIGSALVG 259
>sp|Q6ANR1|LEU3_DESPS 3-isopropylmalate dehydrogenase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=leuB PE=3 SV=1
Length = 357
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+AK YP ++ + VDN TMQ+V +PHQFDVM+ N++G+I+ + A+ + GS
Sbjct: 209 VAKEYPDVKLNHIYVDNATMQLVRDPHQFDVMLCGNMFGDIISDEAAMLTGS 260
>sp|Q9ABN3|LEU3_CAUCR 3-isopropylmalate dehydrogenase OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=leuB PE=3 SV=1
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 15 AKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
A+ YP +Q E ++ DNC MQ+V P QFDV+V NL+G+I+ + A+ + GS
Sbjct: 206 AREYPDVQLEHILADNCAMQLVRAPKQFDVIVTDNLFGDILSDAAAMLTGS 256
>sp|Q47WG3|LEU3_COLP3 3-isopropylmalate dehydrogenase OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=leuB PE=3 SV=1
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +A YP ++ E + VDN MQ+V +P+QFDVM+ PNL+G+I+ ++ + I GS
Sbjct: 207 EEVAVEYPDVELEHLYVDNAAMQLVRDPNQFDVMLCPNLFGDILSDICAMITGS 260
>sp|Q02143|LEU3_LACLA 3-isopropylmalate dehydrogenase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=leuB PE=3 SV=3
Length = 345
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 10 LGQTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +A YP ++ E +VD+C M +++NP QFDV+V NL+G+I+ + AS + GS
Sbjct: 196 MADEIADEYPDVRLEHQLVDSCAMLLITNPQQFDVIVTENLFGDILSDEASSLAGS 251
>sp|P28834|IDH1_YEAST Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH1 PE=1 SV=2
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 16 KLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKG 64
K YP I +IVDN +MQ V+ PHQFDV+V P++YG I+ N+ + + G
Sbjct: 215 KEYPDIDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIG 263
>sp|Q6GF15|LEU3_STAAR 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
MRSA252) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVYENLFGDILSDEASVIPGS 253
>sp|Q5HEE3|LEU3_STAAC 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
COL) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|Q2FF66|LEU3_STAA3 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
USA300) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|Q8NVJ0|LEU3_STAAW 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
MW2) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|Q6G7Q0|LEU3_STAAS 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
MSSA476) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|P65101|LEU3_STAAN 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
N315) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|P65100|LEU3_STAAM 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=leuB PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|Q2YUF1|LEU3_STAAB 3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=leuB PE=3 SV=1
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+++LYP++ ++VD C+M +++NP QFDV+V NL+G+I+ + AS I GS
Sbjct: 202 VSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGS 253
>sp|Q7M886|LEU3_WOLSU 3-isopropylmalate dehydrogenase OS=Wolinella succinogenes (strain
ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC
602W) GN=leuB PE=3 SV=1
Length = 358
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+AK YP+++ M +DN MQ++ NP QFDV++ NL+G+I+ + AS + GS
Sbjct: 205 IAKEYPEVELSHMYIDNAAMQLIRNPKQFDVILTGNLFGDILSDEASMLSGS 256
>sp|Q9EVI1|LEU3_BUCUO 3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp.
Uroleucon obscurum GN=leuB PE=3 SV=1
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
Q ++K YP + + +DN MQI+ NP+QFDV++ PNL+G+I+ + + I GS
Sbjct: 211 QKVSKNYPDVDLSHLYIDNAIMQIIKNPNQFDVLLCPNLFGDIISDECAIITGS 264
>sp|Q5WEN4|LEU3_BACSK 3-isopropylmalate dehydrogenase OS=Bacillus clausii (strain
KSM-K16) GN=leuB PE=3 SV=1
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 10 LGQTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +A+ YP + M+VDN MQ++ +P QFDV+V NL+G+I+ + AS I GS
Sbjct: 204 IADEVAREYPDVTLSHMLVDNAAMQLIRDPRQFDVIVTENLFGDILSDEASMITGS 259
>sp|Q9EVH8|LEU3_BUCUH 3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp.
Uroleucon helianthicola GN=leuB PE=3 SV=1
Length = 363
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ ++K+YP + + +DN TMQI+ NP+QFDV++ NL+G+I+ + + I GS
Sbjct: 210 EKVSKMYPDVHLSHLYIDNATMQIIKNPNQFDVLLCSNLFGDIISDECAVITGS 263
>sp|Q3AEQ2|LEU3_CARHZ 3-isopropylmalate dehydrogenase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=leuB PE=3
SV=1
Length = 374
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ K YP ++ M VDNC MQ++ NP QFDV+V N++G+I+ + S + GS
Sbjct: 216 IKKEYPDVELSYMYVDNCAMQLIRNPRQFDVIVTENMFGDILTDEGSVLAGS 267
>sp|Q9PAX3|LEU3_XYLFA 3-isopropylmalate dehydrogenase OS=Xylella fastidiosa (strain 9a5c)
GN=leuB PE=3 SV=1
Length = 357
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 14 MAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
MAK YP + M VDN MQ+V +P QFDV+V N++G+I+ + AS + GS
Sbjct: 209 MAKDYPDVTLSHMYVDNAAMQLVRHPKQFDVIVTENMFGDILSDQASMLTGS 260
>sp|Q51375|LEU3_PSEAE 3-isopropylmalate dehydrogenase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=leuB
PE=3 SV=2
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 12 QTMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASDIKGS 65
+ +AK YP ++ M VDN MQ+V P QFDVMV N++G+I+ + AS + GS
Sbjct: 207 EEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGS 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,327,033
Number of Sequences: 539616
Number of extensions: 657679
Number of successful extensions: 1548
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1188
Number of HSP's gapped (non-prelim): 358
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)