BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9337
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95922|TTLL1_HUMAN Probable tubulin polyglutamylase TTLL1 OS=Homo sapiens GN=TTLL1
PE=2 SV=1
Length = 423
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 28 KIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRMNDNQII 87
K+ + TD++KSVLINNFEKRGW+ V ED WNFYW +QT RN+FS+E GYR++D+QI+
Sbjct: 4 KVKWVTDIEKSVLINNFEKRGWVQVTENED-WNFYWMSVQTIRNVFSVEAGYRLSDDQIV 62
Query: 88 NHFPNHYELT 97
NHFPNHYELT
Sbjct: 63 NHFPNHYELT 72
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITEL 146
N P G+KFDLRLYVLV+++RPL+CY++KLGFCRFCTVKY + +EL
Sbjct: 185 NNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSEL 233
>sp|Q0VC71|TTLL1_BOVIN Probable tubulin polyglutamylase TTLL1 OS=Bos taurus GN=TTLL1
PE=2 SV=1
Length = 423
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 28 KIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRMNDNQII 87
K+ + TD++KSVLINNFEKRGW+ V ED WNFYW +QT RN+FS+E GYR++D+QI+
Sbjct: 4 KVKWVTDIEKSVLINNFEKRGWVQVTENED-WNFYWMSVQTIRNVFSVETGYRLSDDQIV 62
Query: 88 NHFPNHYELT 97
NHFPNHYELT
Sbjct: 63 NHFPNHYELT 72
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITEL 146
N P G+KFDLRLYVLV+++RPL+CY++KLGFCRFCTVKY + +EL
Sbjct: 185 NNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSEL 233
>sp|Q91V51|TTLL1_MOUSE Probable tubulin polyglutamylase TTLL1 OS=Mus musculus GN=Ttll1
PE=1 SV=1
Length = 423
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 28 KIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRMNDNQII 87
++ + TD++KSVLINNFEKRGWI V ED WNFYW +QT RN+FS+E GYR++D+QI+
Sbjct: 4 RVKWVTDIEKSVLINNFEKRGWIQVTENED-WNFYWMSVQTIRNVFSVETGYRLSDDQIV 62
Query: 88 NHFPNHYELT 97
NHFPNHYELT
Sbjct: 63 NHFPNHYELT 72
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITEL 146
N P G+KFDLRLYVLV+++RPL+CY++KLGFCRFCTVKY + +EL
Sbjct: 185 NNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSEL 233
>sp|Q5PPI9|TTLL1_RAT Probable tubulin polyglutamylase TTLL1 OS=Rattus norvegicus
GN=Ttll1 PE=2 SV=1
Length = 423
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 28 KIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRMNDNQII 87
++ + TD++KSVLINNFEKRGW+ V ED WNFYW +QT RN+FS+E GYR++D+QI+
Sbjct: 4 RVKWVTDIEKSVLINNFEKRGWVQVTENED-WNFYWMSVQTIRNVFSVETGYRLSDDQIV 62
Query: 88 NHFPNHYELT 97
NHFPNHYELT
Sbjct: 63 NHFPNHYELT 72
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITEL 146
N P G+KFDLRLYVLV+++RPL+CY++KLGFCRFCTVKY + +EL
Sbjct: 185 NNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSEL 233
>sp|Q23SI8|TTLL1_TETTS Probable alpha-tubulin polyglutamylase Ttll1 OS=Tetrahymena
thermophila (strain SB210) GN=Ttll1 PE=3 SV=1
Length = 433
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 50/91 (54%), Gaps = 21/91 (23%)
Query: 28 KIYYCTDLDKSVLINNFEKRGWIHV-NSVEDDWNFYWAGIQTCRNIFS------------ 74
K+ Y TD DK VL +NF RGW + +DDWN YWA + RNIF+
Sbjct: 5 KLKYKTDFDKCVLTDNFAARGWTRCGDKDDDDWNIYWATVWNVRNIFNPKSDSQVVSKSD 64
Query: 75 --------LELGYRMNDNQIINHFPNHYELT 97
+LG R+ND QIINHFPNHYELT
Sbjct: 65 FLFLQKNLQKLGIRLNDMQIINHFPNHYELT 95
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITEL 146
+ P G+KFDLR+Y LVTS+RPLK YL+ +GF RFC +Y ++I E+
Sbjct: 208 DNPLLVGGRKFDLRIYALVTSYRPLKVYLYAMGFGRFCNEQYTQDIAEM 256
>sp|Q8CHB8|TTLL5_MOUSE Tubulin polyglutamylase TTLL5 OS=Mus musculus GN=Ttll5 PE=2 SV=3
Length = 1328
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD---KNI 143
N P KFD+RLYVLVTS+ PL YL++ G RF TV+YD KNI
Sbjct: 212 NNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGSKNI 260
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 22 LSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRM 81
+ +R + Y D ++ + G+ V+ D+N W G F L +
Sbjct: 59 IGERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHL--KPFLLR---TL 113
Query: 82 NDNQIINHFPNHYELT 97
++ Q +NHFP YELT
Sbjct: 114 SEAQKVNHFPRSYELT 129
>sp|Q6EEF3|TTLL5_CHLAE Tubulin polyglutamylase TTLL5 OS=Chlorocebus aethiops GN=TTLL5 PE=2
SV=2
Length = 1299
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDK 141
N P KFD+RLYVLVTS+ PL YL++ G RF TV+YD+
Sbjct: 212 NNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQ 255
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 22 LSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRM 81
+ +R + Y D ++ + G+ V+ D+N W G F L +
Sbjct: 59 IGERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHL--KPFLLR---TL 113
Query: 82 NDNQIINHFPNHYELT 97
++ Q +NHFP YELT
Sbjct: 114 SEAQKVNHFPRSYELT 129
>sp|Q5R978|TTLL5_PONAB Tubulin polyglutamylase TTLL5 OS=Pongo abelii GN=TTLL5 PE=2 SV=1
Length = 1299
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDK 141
N P KFD+RLYVLVTS+ PL YL++ G RF TV+YD+
Sbjct: 212 NNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQ 255
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 22 LSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRM 81
+ +R + Y D ++ + G+ V+ D+N W G F L +
Sbjct: 59 IGERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHL--KPFLLR---TL 113
Query: 82 NDNQIINHFPNHYELT 97
++ Q +NHFP YELT
Sbjct: 114 SEAQKVNHFPRSYELT 129
>sp|Q6EMB2|TTLL5_HUMAN Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3
Length = 1281
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDK 141
N P KFD+RLYVLVTS+ PL YL++ G RF TV+YD+
Sbjct: 212 NNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQ 255
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 22 LSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRM 81
+ +R + Y D ++ + G+ V+ D+N W G F L +
Sbjct: 59 IGERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHL--KPFLLR---TL 113
Query: 82 NDNQIINHFPNHYELT 97
++ Q +NHFP YELT
Sbjct: 114 SEAQKVNHFPRSYELT 129
>sp|Q80UG8|TTLL4_MOUSE Tubulin polyglutamylase TTLL4 OS=Mus musculus GN=Ttll4 PE=2 SV=3
Length = 1193
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELAAR 149
P G KFDLR+YV VTS+ PL+ YLF G RF + KY ++ L+ +
Sbjct: 750 PYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLSNK 799
>sp|Q14679|TTLL4_HUMAN Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2
Length = 1199
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELAAR 149
P G KFDLR+YV VTS+ PL+ YLF G RF + KY ++ L +
Sbjct: 755 PYLISGSKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNK 804
>sp|Q23AS2|TTL3E_TETTS Tubulin glycylase 3E OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3E PE=3 SV=1
Length = 1394
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
KKFD+R +VLVTSF+PLK Y F + R C+ +D
Sbjct: 1077 NKKFDIRQWVLVTSFKPLKIYFFTSSYLRVCSQSFD 1112
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 21/62 (33%)
Query: 36 DKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIFSLELGYRMNDNQIINHFPNHYE 95
+K +L NNF+ + WI+++S DD+ F +NDNQ NHF N+ E
Sbjct: 758 NKLLLNNNFDLK-WIYIDS-NDDYKF-------------------LNDNQFYNHFKNNTE 796
Query: 96 LT 97
LT
Sbjct: 797 LT 798
>sp|A8X9V4|TTLL4_CAEBR Tubulin polyglutamylase ttll-4 OS=Caenorhabditis briggsae GN=ttll-4
PE=3 SV=1
Length = 597
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELA 147
KFDLRLY V +F PL+ Y++ G RF +V Y+ ++T ++
Sbjct: 291 KFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYNPSVTNIS 331
>sp|P0CAZ1|TTL3F_TETTS Tubulin glycylase 3F OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3F PE=3 SV=1
Length = 909
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
KKFDLRL+VLV SF PL Y +K + R C+ +YD
Sbjct: 671 NKKFDLRLWVLVKSFNPLTVYYYKHAYLRVCSSEYD 706
>sp|Q3SZH6|TTLL9_BOVIN Probable tubulin polyglutamylase TTLL9 OS=Bos taurus GN=TTLL9 PE=2
SV=1
Length = 461
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKN 142
G+KFDLR+YVLV S+ PL+ +L++ GF RF ++ N
Sbjct: 229 GRKFDLRVYVLVMSYIPLRAWLYRDGFARFSNTRFTLN 266
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 14 GSGQQNVSLSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIF 73
G G Q +++ I + T L +++ + GW+ V E +W+FYW + R F
Sbjct: 11 GHGLQKGKEREQRASIRFKTTLMNTLMDVLRHRPGWVEVKD-EGEWDFYWCDVSWLRENF 69
Query: 74 SLELGYRMNDNQIINHFPNHYELTNTP-TARRGKKFDLRLYVLVTSFRPLKCYLFKLGFC 132
M ++ I+HF NHYELT + K+F +L KC F F
Sbjct: 70 DHTY---MGEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFE 126
Query: 133 RFC 135
C
Sbjct: 127 MPC 129
>sp|A2APC3|TTLL9_MOUSE Probable tubulin polyglutamylase TTLL9 OS=Mus musculus GN=Ttll9
PE=2 SV=2
Length = 461
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKN 142
G+KFDLR+YVLV S+ PL+ +L++ GF RF ++ N
Sbjct: 229 GRKFDLRVYVLVMSYIPLRAWLYRDGFARFSNTRFTLN 266
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 12 ANGSGQQNVSLSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRN 71
+ G G +++ I + T L +++ + GW+ V E +W+FYW + R
Sbjct: 9 SKGHGVSKGKEREQRTLIRFKTTLMNTLMDVLRHRPGWVEVKD-EGEWDFYWCDVSWLRE 67
Query: 72 IFSLELGYRMNDNQIINHFPNHYELT 97
F M+++ I+HF NHYELT
Sbjct: 68 NFDHTY---MDEHVRISHFRNHYELT 90
>sp|Q641W7|TTLL9_RAT Probable tubulin polyglutamylase TTLL9 OS=Rattus norvegicus
GN=Ttll9 PE=2 SV=1
Length = 461
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKN 142
G+KFDLR+YVLV S+ PL+ +L++ GF RF ++ N
Sbjct: 229 GRKFDLRVYVLVMSYIPLRAWLYRDGFARFSNTRFTLN 266
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 12 ANGSGQQNVSLSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRN 71
+ G G +++ I + T L +++ + GW+ V E +W+FYW + R
Sbjct: 9 SKGHGASKGKEREQRTLIRFKTTLMNTLMDVLRHRPGWVEVKD-EGEWDFYWCDVSWLRE 67
Query: 72 IFSLELGYRMNDNQIINHFPNHYELTNTP-TARRGKKFDLRLYVLVTSFRPLKCYLFKLG 130
F M+++ I+HF NHYELT + K+F +L KC F
Sbjct: 68 NFDHTY---MDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKTEAAKCDFFPKT 124
Query: 131 FCRFC 135
F C
Sbjct: 125 FEMPC 129
>sp|Q6ZT98|TTLL7_HUMAN Tubulin polyglutamylase TTLL7 OS=Homo sapiens GN=TTLL7 PE=2 SV=2
Length = 887
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 95 ELTNTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY----DKNITEL 146
E P G KFDLR+Y+LVTS PLK +L+ G R T KY + N+T+L
Sbjct: 189 EYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQL 244
>sp|A4Q9F0|TTLL7_MOUSE Tubulin polyglutamylase TTLL7 OS=Mus musculus GN=Ttll7 PE=1 SV=1
Length = 912
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 95 ELTNTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY----DKNITEL 146
E P G KFDLR+Y+LVTS PLK +L+ G R T KY + N+T+L
Sbjct: 189 EYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQL 244
>sp|Q09647|TTLL4_CAEEL Tubulin polyglutamylase ttll-4 OS=Caenorhabditis elegans GN=ttll-4
PE=2 SV=3
Length = 601
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELA 147
KFDLRLY V +F PL+ Y++ G RF +V Y +++ ++
Sbjct: 295 KFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPYSHSVSTIS 335
>sp|A8CVX7|TTLL6_DANRE Tubulin polyglutamylase ttll6 OS=Danio rerio GN=ttll6 PE=2 SV=1
Length = 778
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
G KFDLR+YVLVTS P + +++ G RFCT Y
Sbjct: 207 GFKFDLRIYVLVTSCDPFRVFMYDEGLVRFCTTHY 241
>sp|Q8N841|TTLL6_HUMAN Tubulin polyglutamylase TTLL6 OS=Homo sapiens GN=TTLL6 PE=1 SV=2
Length = 843
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITE 145
G KFDLR+YVLVTS PL+ +++ G RF T Y + T+
Sbjct: 214 GFKFDLRIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCTD 254
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Query: 56 EDDWNFYWAGIQTCRNIFSLELGYRMNDNQIINHFPNHYEL 96
+DDW YW SLE M Q INHFP E+
Sbjct: 88 DDDWTLYWTDYSV-----SLERVMEMKSYQKINHFPGMSEI 123
>sp|Q23MT7|TTL6A_TETTS Probable beta-tubulin polyglutamylase OS=Tetrahymena thermophila
(strain SB210) GN=Ttll6a PE=4 SV=1
Length = 1189
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
N P G KFD RLYVL+ PL+ YL+ G RF T KY
Sbjct: 504 NKPYLIDGLKFDFRLYVLLAGCDPLRIYLYYEGLTRFATEKY 545
>sp|A4Q9F4|TTL11_MOUSE Tubulin polyglutamylase TTLL11 OS=Mus musculus GN=Ttll11 PE=2 SV=1
Length = 727
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDK 141
KFD+RLYVL+ S PL+ Y+ K G RFCT Y +
Sbjct: 292 KFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQE 326
>sp|Q8NHH1|TTL11_HUMAN Tubulin polyglutamylase TTLL11 OS=Homo sapiens GN=TTLL11 PE=2 SV=1
Length = 538
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDK 141
KFD+RLYVL+ S PL+ Y+ K G RFCT Y +
Sbjct: 385 KFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQE 419
>sp|A4Q9F6|TTL13_MOUSE Tubulin polyglutamylase TTLL13 OS=Mus musculus GN=Ttll13 PE=2 SV=1
Length = 804
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
G KFD+R+YVL+TS PL+ ++++ G RF T+ Y
Sbjct: 241 GFKFDMRIYVLITSCDPLRIFMYEEGLARFATMPY 275
>sp|A4Q9E8|TTLL6_MOUSE Tubulin polyglutamylase TTLL6 OS=Mus musculus GN=Ttll6 PE=2 SV=1
Length = 822
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
G KFDLR+YVLVTS PL+ +++ G RF T Y
Sbjct: 213 GFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSY 247
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 57 DDWNFYWAGIQTCRNIFSLELGYRMNDNQIINHFPNHYELTNTPTARRGKKFDLRLY 113
DDW YW SLE M Q INHFP E+ R L+L+
Sbjct: 88 DDWTLYWTDYSV-----SLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLF 139
>sp|Q9BWV7|TTLL2_HUMAN Probable tubulin polyglutamylase TTLL2 OS=Homo sapiens GN=TTLL2
PE=5 SV=3
Length = 592
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
K DLR+YV VT F+PL Y+++ G RF T K+D
Sbjct: 253 KCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFD 286
>sp|Q3SXZ7|TTLL9_HUMAN Probable tubulin polyglutamylase TTLL9 OS=Homo sapiens GN=TTLL9
PE=2 SV=3
Length = 439
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 14 GSGQQNVSLSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTCRNIF 73
G G +++ I + T L +++ + GW+ V E +W+FYW + R F
Sbjct: 29 GHGLSKGKEREQRASIRFKTTLMNTLMDVLRHRPGWVEVKD-EGEWDFYWCDVSWLRENF 87
Query: 74 SLELGYRMNDNQIINHFPNHYELTNTP-TARRGKKFDLRLYVLVTSFRPLKCYLFKLGFC 132
M+++ I+HF NHYELT + K+F +L KC F F
Sbjct: 88 DHTY---MDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCDFFPKTFE 144
Query: 133 RFC 135
C
Sbjct: 145 MPC 147
>sp|A4Q9E4|TTLL2_MOUSE Probable tubulin polyglutamylase TTLL2 OS=Mus musculus GN=Ttll2
PE=2 SV=1
Length = 540
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
K DLR+YV +T F+PL Y+++ G RF T K+D
Sbjct: 210 KCDLRIYVCITGFKPLTIYMYQEGLVRFATEKFD 243
>sp|A6NNM8|TTL13_HUMAN Tubulin polyglutamylase TTLL13 OS=Homo sapiens GN=TTLL13 PE=2 SV=2
Length = 815
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 65 GIQTCRNIFSLELGYRMNDNQIINHFPNHYELTNTPTARRGKKFDLRLYVLVTSFRPLKC 124
GI RN ++ G M Q I+ P G KFD+R+YVL+TS PL+
Sbjct: 211 GIFITRNPREIKPGEHMICQQYIS----------KPLLIDGFKFDMRVYVLITSCDPLRI 260
Query: 125 YLFKLGFCRFCTVKY 139
+ ++ G RF T Y
Sbjct: 261 FTYEEGLARFATTPY 275
>sp|Q23TC2|TTL3A_TETTS Tubulin glycylase 3A OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3A PE=1 SV=1
Length = 875
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
P KKFD+R +VLVT + PL Y + + R C +YD
Sbjct: 679 PLTIHKKKFDIRQWVLVTEWNPLTIYFYDTCYIRICFDEYD 719
>sp|Q23K29|TTL3D_TETTS Tubulin glycylase 3D OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3D PE=3 SV=1
Length = 1015
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
P + +KFD+R++VLVT + PL + F + RF Y
Sbjct: 728 PVLIKQRKFDIRIWVLVTDWNPLAIWYFDECYVRFSADSY 767
>sp|A4Q9E5|TTLL3_MOUSE Tubulin monoglycylase TTLL3 OS=Mus musculus GN=Ttll3 PE=1 SV=1
Length = 927
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD-KNI 143
G KFDLR + LVT + PL + ++ + RF T + KN+
Sbjct: 525 GTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNL 564
>sp|Q9Y4R7|TTLL3_HUMAN Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2
Length = 772
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 105 GKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD-KNI 143
G KFDLR + LVT + PL + ++ + RF T + KN+
Sbjct: 332 GTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNL 371
>sp|Q23FE2|TTL3C_TETTS Tubulin glycylase 3C OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3C PE=3 SV=1
Length = 1088
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
P + +KFD+R+++LVT + PL + + + RF YD
Sbjct: 842 PLIIKKRKFDIRVWILVTDWNPLTIWHYTDCYVRFSVDDYD 882
>sp|A6PVC2|TTLL8_HUMAN Protein monoglycylase TTLL8 OS=Homo sapiens GN=TTLL8 PE=2 SV=4
Length = 850
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 99 TPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
TP KFD+R + LVT + PL + +K + RF T ++
Sbjct: 397 TPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF 437
>sp|A4Q9F1|TTLL8_MOUSE Protein monoglycylase TTLL8 OS=Mus musculus GN=Ttll8 PE=1 SV=1
Length = 832
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 98 NTPTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
TP KFD+R + LVT + PL + +K + RF T ++
Sbjct: 439 ETPMLIYDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF 480
>sp|P0CAZ0|TTL3B_TETTS Tubulin glycylase 3B OS=Tetrahymena thermophila (strain SB210)
GN=TTLL3B PE=1 SV=1
Length = 1160
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 106 KKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELAAR 149
+KFD+R + +V F P + + F+ + R C+V++ NI +L R
Sbjct: 958 QKFDMRQWAIVQDFCPPRIWFFEECYIRLCSVEH--NIDDLNNR 999
>sp|Q5L530|MIAA_CHLAB tRNA dimethylallyltransferase OS=Chlamydophila abortus (strain
S26/3) GN=miaA PE=3 SV=2
Length = 342
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 14/65 (21%)
Query: 10 YQANGSGQQNVSLSDRQNKIYYCTDLDKSVLINNFEKRGWIHVNSVEDDWNFYWAGIQTC 69
Y+ G VS DRQ +Y D+ HV + + +FY+ IQ C
Sbjct: 69 YRGMDIGTAKVSWEDRQRIPHYLIDI--------------CHVQELFNAVDFYYQAIQAC 114
Query: 70 RNIFS 74
+NI S
Sbjct: 115 QNILS 119
>sp|Q14166|TTL12_HUMAN Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12
PE=1 SV=2
Length = 644
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKN 142
KFD+R VL+ S RPL+ +++ + + RF + N
Sbjct: 468 KFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALN 503
>sp|Q4R7H0|TTL10_MACFA Protein polyglycylase TTLL10 OS=Macaca fascicularis GN=TTLL10 PE=2
SV=1
Length = 618
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 100 PTARRGKKFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYDKNITELAA 148
P G+KFD+R Y+L+ P + F G+ R YD + ++L+
Sbjct: 295 PLLLDGRKFDVRSYLLIACTTPYMIF-FSHGYARLTLSLYDPHSSDLSG 342
>sp|Q1ECV4|TTLL3_DANRE Tubulin monoglycylase TTLL3 OS=Danio rerio GN=ttll3 PE=2 SV=1
Length = 771
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKY 139
KFD+R + LVT + PL + ++ + RF T Y
Sbjct: 390 KFDVRQWFLVTDWNPLTVWFYRECYLRFSTQPY 422
>sp|Q9VM91|TTL3A_DROME Tubulin glycylase 3A OS=Drosophila melanogaster GN=TTLL3A PE=1 SV=1
Length = 992
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 107 KFDLRLYVLVTSFRPLKCYLFKLGFCRFCTVKYD 140
KFD+R + L+T+ +PL + ++ + RF + +Y
Sbjct: 470 KFDIRQWFLITNTQPLVVWFYRESYLRFSSQEYS 503
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,443,296
Number of Sequences: 539616
Number of extensions: 2140726
Number of successful extensions: 5527
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5440
Number of HSP's gapped (non-prelim): 75
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 56 (26.2 bits)