BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9338
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93353|IDH3B_CAEEL Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C37E2.1 PE=3 SV=1
Length = 379
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 75/98 (76%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S + V+FEPG+RH++ EA+G+++ANPTAM+LC+ ML+H++L +G+
Sbjct: 281 LVGGAGVVPGQSVGRDFVIFEPGSRHSFQEAMGRSIANPTAMILCAANMLNHLHLDAWGN 340
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
+R AV V+K GKVRT+DLGG +TT ++ AVI +
Sbjct: 341 SLRQAVADVVKEGKVRTRDLGGYATTVDFADAVIDKFR 378
>sp|Q28479|IDH3B_MACFA Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Macaca fascicularis GN=IDH3B PE=2 SV=2
Length = 385
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 78/97 (80%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S+S E VFE GARH +++AVG+N+ANPTAMLL ++ ML H+NL+Y+ +
Sbjct: 284 LVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSN 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
MI +AV +V+K GKVRT+D+GG STT ++ +VI +L
Sbjct: 344 MIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>sp|O43837|IDH3B_HUMAN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo
sapiens GN=IDH3B PE=1 SV=2
Length = 385
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 78/98 (79%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S+S E VFE GARH +++AVG+N+ANPTAMLL ++ ML H+NL+Y+
Sbjct: 284 LVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSS 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
MI +AV +V+K GKVRT+D+GG STT ++ +VI +L+
Sbjct: 344 MIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLQ 381
>sp|Q68FX0|IDH3B_RAT Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Rattus norvegicus GN=Idh3B PE=1 SV=1
Length = 385
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 77/97 (79%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S+S E VFE GARH +++AVG+N+ANPTAMLL ++ ML H+NL+Y+
Sbjct: 284 LVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSS 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
MI +AV +V+K GKVRT+D+GG STT ++ +VI +L
Sbjct: 344 MIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>sp|Q5RBT4|IDH3B_PONAB Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo
abelii GN=IDH3B PE=2 SV=1
Length = 385
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 77/97 (79%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S+S E VFE GARH +++AVG+N+ANPTAMLL ++ ML H+NL+Y+
Sbjct: 284 LVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSS 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
MI +AV +V+K GKVRT+D+GG STT ++ +VI +L
Sbjct: 344 MIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 77/97 (79%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGGAGVV G S+S E VFE GARH +++AVG+N+ANPTAMLL ++ ML H+NL+++ +
Sbjct: 284 LVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEHHSN 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
MI AV +V+K GKVRT+D+GG STT ++ +VI +L
Sbjct: 344 MIAEAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHL 380
>sp|O94229|IDH1_KLULA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH1 PE=3
SV=1
Length = 361
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 64/97 (65%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+GG G+V GA++ E VFEPG+RH + G+NVANPTAM+L ST ML H+ L Y D
Sbjct: 262 LIGGPGLVPGANFGREYAVFEPGSRHVGLDIKGQNVANPTAMILSSTLMLRHLGLNAYAD 321
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I A V+ GK T+D+GG ++T E+T AVI L
Sbjct: 322 RISKATYDVISEGKSTTRDIGGSASTSEFTNAVIEKL 358
>sp|P28834|IDH1_YEAST Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH1 PE=1 SV=2
Length = 360
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+GG G+VAGA++ + VFEPG+RH + G+NVANPTAM+L ST ML+H+ L Y
Sbjct: 261 LIGGPGLVAGANFGRDYAVFEPGSRHVGLDIKGQNVANPTAMILSSTLMLNHLGLNEYAT 320
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I AV+ + GK T+D+GG S+T ++T +I L
Sbjct: 321 RISKAVHETIAEGKHTTRDIGGSSSTTDFTNEIINKL 357
>sp|O13696|IDH1_SCHPO Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh1 PE=1 SV=1
Length = 356
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG GV+ GA++ + +FEPG RH G+ ANPTA +L + ML H+ L+ Y D
Sbjct: 257 LVGGPGVIPGANFGRDYALFEPGCRHVGLSITGRGEANPTAAILSACLMLRHLGLKDYAD 316
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
+I A V++ GK TKDLGG ++T ++T+A++ ++
Sbjct: 317 LINAATYSVIEEGKTLTKDLGGSASTGDFTHAILERME 354
>sp|O13302|IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Ajellomyces capsulatus GN=IDH1 PE=2 SV=1
Length = 388
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+V G + + VFEPG RH + GK+ ANPTA++L + +L H+ L + +
Sbjct: 288 LVGGPGIVPGCNMGRDVAVFEPGCRHVGLDIKGKDQANPTALILSGSMLLRHLGLDEHAN 347
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
I AV V+ G RT+D+GGQ++T E+T AV+ ++
Sbjct: 348 RISKAVYDVIGEGVTRTRDMGGQASTHEFTRAVLDKME 385
>sp|Q54B68|IDHB_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial
OS=Dictyostelium discoideum GN=idhB PE=3 SV=1
Length = 360
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+ GA+ ++FE GA H ++ GK+ ANPT +LL S ML H+ L +
Sbjct: 260 LVGGPGLAGGANVGEGSIIFEMGAHHVAADIAGKDKANPTGLLLASVMMLKHLGLNEHAT 319
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVI 126
+ NAV V+K G + T D+GG+S+T+++T AVI
Sbjct: 320 KVENAVKAVIKEGTL-TSDIGGKSSTKQFTGAVI 352
>sp|P93032|IDH2_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial
OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2
Length = 367
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNV------ANPTAMLLCSTKMLSHVN 86
+ GG GV+ G + E VFE GA + VGK+ ANP A+LL S ML H+
Sbjct: 267 IAGGTGVMPGGNVGAEYAVFEQGAS---AGNVGKDTTEEQKNANPVALLLSSAMMLRHLQ 323
Query: 87 LQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
+ D + AV RV+ G RT+DLGG STTQE AVIANL
Sbjct: 324 FPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANL 366
>sp|Q8LFC0|IDH1_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2
Length = 367
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHT---YSEAVGKNVANPTAMLLCSTKMLSHVNLQY 89
+ GG GV+ G + + VFE GA + V +N ANP A+LL S ML H+
Sbjct: 267 IAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPS 326
Query: 90 YGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
+ D + AV +V+ GK RTKDLGG STTQE AVIA L
Sbjct: 327 FADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAVIAKL 366
>sp|P51553|IDH3G_HUMAN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo
sapiens GN=IDH3G PE=1 SV=1
Length = 393
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+VAGA++ VFE R+T KN+ANPTA LL S ML H+ L Y
Sbjct: 287 LVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYAT 346
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR AV + + T D+GGQ TT E VI +++
Sbjct: 347 SIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHIR 384
>sp|P41564|IDH3G_MACFA Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1
Length = 355
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+VAGA++ VFE R+T KN+ANPTA LL S ML H+ L Y
Sbjct: 249 LVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYAT 308
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR AV + + T D+GGQ TT E +I +++
Sbjct: 309 SIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHIR 346
>sp|Q58CP0|IDH3G_BOVIN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos
taurus GN=IDH3G PE=2 SV=1
Length = 392
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+VAGA++ VFE R+T KN+ANPTA LL S ML H+ L Y
Sbjct: 286 LVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYAT 345
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR AV + + T D+GGQ TT E +I +++
Sbjct: 346 SIRKAVLASMDNENMHTPDIGGQGTTSEAIQDIIRHIR 383
>sp|O81796|IDH3_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial
OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1
Length = 368
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTY---SEAVGKNVANPTAMLLCSTKMLSHVNLQY 89
+ GG GV+ G + E +FE GA + V + ANP A+LL S ML H+
Sbjct: 268 IAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPT 327
Query: 90 YGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
+ D + AV +V+K GK RTKDLGG TTQE AVIA L+
Sbjct: 328 FADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAVIAALE 368
>sp|P41565|IDHG1_RAT Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Rattus norvegicus GN=Idh3g PE=2 SV=2
Length = 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+VAGA++ VFE R+T KN+ANPTA LL S ML H+ L Y
Sbjct: 287 LVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYAT 346
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR AV + + T D+GGQ TT + +I +++
Sbjct: 347 SIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHIR 384
>sp|P70404|IDHG1_MOUSE Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Mus musculus GN=Idh3g PE=1 SV=1
Length = 393
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+VAGA++ VFE R+T KN+ANPTA LL S ML H+ L Y
Sbjct: 287 LVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYAT 346
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR AV + + T D+GGQ TT + +I +++
Sbjct: 347 SIRKAVLASMDNENMHTPDIGGQGTTSQAIQDIIRHIR 384
>sp|Q4QQT5|IDHG2_RAT Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Rattus norvegicus PE=2 SV=1
Length = 395
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG+G+V GA++ +FE G++ + +N+ANP AMLL S ML +++LQ Y
Sbjct: 284 LVGGSGIVPGANYGDSYAIFETGSKEIGQDLAHRNIANPVAMLLTSCIMLDYLDLQLYAA 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR+AV L+ + T D+GGQ TT ++ ++K
Sbjct: 344 HIRSAVMASLQNKSICTPDIGGQGTTAGVVEYILDHMK 381
>sp|Q8BPC6|IDHG2_MOUSE Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Mus musculus PE=1 SV=1
Length = 396
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG+G+V GA++ +FE G++ + +N+ANP AMLL S ML +++LQ Y
Sbjct: 284 LVGGSGIVPGANYGDSYAIFEMGSKEIGKDLAHRNIANPVAMLLTSCIMLDYLDLQPYAT 343
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
IR+AV L+ V T D+GGQ T ++ ++K
Sbjct: 344 HIRSAVMASLQNKAVCTPDIGGQGNTASTVEYILHHMK 381
>sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1
Length = 374
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 37 AGVVAGASWSPECVVFEPGARHTYSEAV--------GKNVANPTAMLLCSTKMLSHVNLQ 88
AG+V G +P C + E G +EAV GKN+ANPTA+LL ML H+
Sbjct: 276 AGLVGGLGLTPSCNIGEDGV--ALAEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFN 333
Query: 89 YYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
+ I +A+ + GK RT DLGG STT E+T A+ +L
Sbjct: 334 EQAEQIHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374
>sp|Q9USP8|IDH2_SCHPO Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh2 PE=1 SV=2
Length = 379
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+GG G+ + + +FE T + GK +ANPTA+LL S ML H+NL Y
Sbjct: 282 LIGGLGLTPSGNIGNQASIFE-AVHGTAPDIAGKGLANPTALLLSSVMMLKHMNLNDYAK 340
Query: 93 MIRNAVNRVLKAG-KVRTKDLGGQSTTQEYTYAVIANLK 130
I +A+ L RTKDLGG+S +YT A+I+ LK
Sbjct: 341 RIESAIFDTLANNPDARTKDLGGKSNNVQYTDAIISKLK 379
>sp|Q9VWH4|IDH3A_DROME Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Drosophila melanogaster GN=l(1)G0156
PE=2 SV=1
Length = 377
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+ + +FE T + GK++ANPTA+LL + ML H+ L Y D
Sbjct: 282 LVGGLGLTPSGNMGLNGALFE-SVHGTAPDIAGKDLANPTALLLSAVMMLRHMELNTYAD 340
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I A +K GK T DLGG++ E+T + A L
Sbjct: 341 KIERAAFETIKEGKYLTGDLGGRAKCSEFTNEICAKL 377
>sp|Q8LG77|IDH6_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial
OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2
Length = 374
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+ + + + + + G N+ANPTA+LL ML H+ L +
Sbjct: 278 LVGGLGLTPSMNIGEDGIALAEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAE 337
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I +A+ + GK RT DLGG STT ++T A+ +L
Sbjct: 338 QIHSAIINTIAEGKYRTADLGGSSTTTDFTKAICDHL 374
>sp|Q55BI2|IDHA_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial
OS=Dictyostelium discoideum GN=idhA PE=3 SV=1
Length = 354
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 37 AGVVAGASWSPECVVFEPG-----ARH-TYSEAVGKNVANPTAMLLCSTKMLSHVNLQYY 90
AG++ G +P + E G A H T + GKN ANPTA++L S ML H+ +
Sbjct: 250 AGLIGGLGLTPSGNIGENGSAIFEAVHGTAPDIAGKNKANPTALILSSIMMLRHLGHFHE 309
Query: 91 GDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYT 122
+I NAV L GKV+T DLGG S+ EYT
Sbjct: 310 ASIIENAVLNTLTEGKVKTGDLGGNSSCSEYT 341
>sp|Q93714|IDH3A_CAEEL Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1
SV=3
Length = 358
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL LVGG GV + VFE T +
Sbjct: 230 LNMVQDPSQYDVLVMPNLYGDILSDLCAGLVGGLGVTPSGNIGKGAAVFE-SVHGTAPDI 288
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
G++ ANPTA+LL + ML ++NL + I AV + G+ +T DLGG T +T
Sbjct: 289 AGQDKANPTALLLSAVMMLRYMNLPQHAARIEKAVFDAIADGRAKTGDLGGTGTCSSFTA 348
Query: 124 AVIANLK 130
V A +K
Sbjct: 349 DVCARVK 355
>sp|P41563|IDH3A_BOVIN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos
taurus GN=IDH3A PE=1 SV=1
Length = 366
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 237 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDI 296
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG S ++T
Sbjct: 297 AGKDMANPTALLLSAVMMLRHMGLFDHAAKIETACFATIKDGKSLTKDLGGNSKCSDFTE 356
Query: 124 AVIANLK 130
+ +K
Sbjct: 357 EICRRVK 363
>sp|O27441|LEU3_METTH 3-isopropylmalate dehydrogenase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=leuB PE=3 SV=1
Length = 329
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+GG G+ A+ + +FEP + + GKN+ANPTAM+L +T ML H+N +
Sbjct: 233 LIGGLGLAPSANIGEKNALFEP-VHGSAPQIAGKNIANPTAMILTTTLMLKHLNKKQEAQ 291
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANLK 130
I A+ + L G V T DLGG+ T E + +L+
Sbjct: 292 KIEKALQKTLAEGLV-TPDLGGKLGTMEMAAEIARHLE 328
>sp|P87257|LEU3B_ASPNG 3-isopropylmalate dehydrogenase B OS=Aspergillus niger GN=leu2B
PE=2 SV=1
Length = 371
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 65 GKNVANPTAMLLCSTKMLSH-VNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GKN+ANPTAM+LC + M + N++ I +AV VL G +RT DLGG S+TQE+
Sbjct: 303 GKNIANPTAMILCVSLMFRYSFNMENEARQIEDAVRAVLDRG-LRTPDLGGNSSTQEFGD 361
Query: 124 AVIANLK 130
AV+A L+
Sbjct: 362 AVVAALQ 368
>sp|Q99NA5|IDH3A_RAT Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Idh3a PE=1 SV=1
Length = 366
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 237 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTQSGNIGANGVAIFESVHGTAPDI 296
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG S ++T
Sbjct: 297 AGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNSKCSDFTE 356
Query: 124 AVIANLK 130
+ +K
Sbjct: 357 EICRRVK 363
>sp|Q28480|IDH3A_MACFA Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2
Length = 347
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 218 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDI 277
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG + ++T
Sbjct: 278 AGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTE 337
Query: 124 AVIANLK 130
+ +K
Sbjct: 338 EICRRVK 344
>sp|P50213|IDH3A_HUMAN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo
sapiens GN=IDH3A PE=1 SV=1
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 237 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDI 296
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG + ++T
Sbjct: 297 AGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTE 356
Query: 124 AVIANLK 130
+ +K
Sbjct: 357 EICRRVK 363
>sp|Q5R678|IDH3A_PONAB Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Pongo abelii GN=IDH3A PE=2 SV=1
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 237 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDI 296
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG + ++T
Sbjct: 297 AGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTE 356
Query: 124 AVIANLK 130
+ +K
Sbjct: 357 EICRRVK 363
>sp|P28241|IDH2_YEAST Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH2 PE=1 SV=1
Length = 369
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 35 GGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMI 94
G G+ A+ + +FE + + G++ ANPTA+LL S ML+H+ L + D I
Sbjct: 275 GSLGLTPSANIGHKISIFE-AVHGSAPDIAGQDKANPTALLLSSVMMLNHMGLTNHADQI 333
Query: 95 RNAVNRVLKAG-KVRTKDLGGQSTTQEYTYAVIANL 129
+NAV + +G + RT DL G +TT +T AVI L
Sbjct: 334 QNAVLSTIASGPENRTGDLAGTATTSSFTEAVIKRL 369
>sp|Q9D6R2|IDH3A_MOUSE Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus
musculus GN=Idh3a PE=1 SV=1
Length = 366
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 6 LDLKEDSKQLSAPSVKSKQNNIWLDL--RLVGGAGVVAGASWSPECVVFEPGARHTYSEA 63
L++ +D Q + + +I DL L+GG GV + V T +
Sbjct: 237 LNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDI 296
Query: 64 VGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTY 123
GK++ANPTA+LL + ML H+ L + I A +K GK TKDLGG + ++T
Sbjct: 297 AGKDMANPTALLLSAVMMLRHMGLFDHAAKIEAACFATIKDGKSLTKDLGGNAKCSDFTE 356
Query: 124 AVIANLK 130
+ +K
Sbjct: 357 EICRRVK 363
>sp|P33197|IDH_THET8 Isocitrate dehydrogenase [NADP] OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=icd PE=1 SV=2
Length = 496
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 33 LVGGAGVVAGASWSPECVVFEP--GARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYY 90
L+GG G A+ E +FE G+ Y+ GKNV NPTA+LL + ML ++
Sbjct: 257 LIGGLGFAPSANIGNEVAIFEAVHGSAPKYA---GKNVINPTAVLLSAVMMLRYLEEFAT 313
Query: 91 GDMIRNAVNRVLKAGKVRTKDLGGQ---STTQEYTYAVIANL 129
D+I NA+ L+ G+V T D+ G + T EYT A+I NL
Sbjct: 314 ADLIENALLYTLEEGRVLTGDVVGYDRGAKTTEYTEAIIQNL 355
>sp|O29627|LEU3_ARCFU 3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=leuB PE=3 SV=1
Length = 326
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVGG G+ A+ +FEP + A GK +ANPTAM+L + ML H
Sbjct: 231 LVGGLGLAPSANVGERTAIFEPVHGAAFDIA-GKGIANPTAMILTACMMLRHFGYVEEAK 289
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEY 121
+ AV + +K GK +T DLGG T E+
Sbjct: 290 KVEEAVEKTIKEGK-KTPDLGGNLKTMEF 317
>sp|O94230|IDH2_KLULA Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH2 PE=3
SV=1
Length = 368
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 35 GGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMI 94
G G+ A+ +FE + + G+N ANPTA+LL S ML+H+ L + D I
Sbjct: 274 GSLGLTPSANIGHTVSIFE-AVHGSAPDIAGQNKANPTALLLSSVMMLNHMGLTEHADKI 332
Query: 95 RNAV-NRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
AV + K RT DLGG ++T +T AVI L
Sbjct: 333 EKAVLTTIASDAKNRTGDLGGSASTSSFTDAVIERL 368
>sp|O14104|LYS12_SCHPO Probable homoisocitrate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lys12 PE=1 SV=1
Length = 362
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+G G+V A+ V+ EP + + G+ +ANP A ML + Q
Sbjct: 265 LIGSLGLVPSANVGDNFVMSEP-VHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAA 323
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I AV++VL GKV T DLGG+S T E T AV+AN+
Sbjct: 324 DIYTAVDKVLTEGKVLTPDLGGKSGTNEITDAVLANI 360
>sp|P40495|LYS12_YEAST Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LYS12 PE=1
SV=1
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
LVG GVV A+ PE V+ EP + + GK +ANP A + + ML +
Sbjct: 276 LVGSLGVVPSANVGPEIVIGEP-CHGSAPDIAGKGIANPIATIRSTALMLEFLGHNEAAQ 334
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
I AV+ L+ G ++T DLGG+++TQ+ V++ L
Sbjct: 335 DIYKAVDANLREGSIKTPDLGGKASTQQVVDDVLSRL 371
>sp|Q48806|DLPA_LEGPH Protein DlpA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dlpA PE=3
SV=1
Length = 615
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 26 NIWLDLRLVGGAGVVAGASWSPECVV------FEPGARHTYSEAVGKNVANPTAMLLCST 79
N++ D+ GAGV+ G +P + FEP H + KN ANP+AM L +
Sbjct: 259 NMFGDILSDVGAGVMGGLGLAPSANIGDKGSYFEP--VHGSGPRIRKNCANPSAMFLTIS 316
Query: 80 KMLSHVNLQYYGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVI 126
+L+H I NAV +V+K + T DLGG +TT + AVI
Sbjct: 317 MLLNHFGYPDRAKKIVNAVMQVIKEKRFITYDLGGHATTTDMANAVI 363
>sp|Q5M405|LEU3_STRT2 3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=leuB PE=3 SV=2
Length = 345
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 33 LVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYY 90
L G GV+ AS S ++EP + + G+ +ANP +M+L ML N
Sbjct: 249 LPGTLGVMPSASHSENGPSLYEP-IHGSAPDIAGQGIANPISMILSVAMMLRESFNETEG 307
Query: 91 GDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
++I NAV++ L G + T+DLGGQ++T E T A+I+NL
Sbjct: 308 AELIENAVDKTLNQG-ILTRDLGGQASTAEMTAAIISNL 345
>sp|Q5LZF3|LEU3_STRT1 3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=leuB PE=3 SV=2
Length = 345
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 33 LVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYY 90
L G GV+ AS S ++EP + + G+ +ANP +M+L ML N
Sbjct: 249 LPGTLGVMPSASHSENGPSLYEP-IHGSAPDIAGQGIANPISMILSVAMMLRESFNETEG 307
Query: 91 GDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
++I NAV++ L G + T+DLGGQ++T E T A+I+NL
Sbjct: 308 AELIENAVDKTLNQG-ILTRDLGGQASTAEMTAAIISNL 345
>sp|Q8DTG3|LEU3_STRMU 3-isopropylmalate dehydrogenase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=leuB PE=3 SV=1
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 33 LVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYG 91
L G GV+ AS S ++EP + + GK +ANP +M+L ML + G
Sbjct: 248 LPGTLGVMPSASHSESGPSLYEP-IHGSAPDIAGKGIANPISMILSVAMMLRDSFGETAG 306
Query: 92 -DMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
+MI +AVN+ L G + T+DLGG + T++ T A+IANL
Sbjct: 307 AEMIEHAVNKTLTQG-ILTRDLGGLANTKQMTAAIIANL 344
>sp|P29696|LEU3_SOLTU 3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 357
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 37 AGVVAGASWSPECVVFEPG-----ARH-TYSEAVGKNVANPTAMLLCSTKMLSHVNLQYY 90
AG++ G +P C + E G A H + + GKN+ANPTA+LL S ML H+ L
Sbjct: 269 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVSMLRHLELHDK 328
Query: 91 GDMIRNAVNRVLKAGKV 107
D I++A+ + + GKV
Sbjct: 329 ADRIQDAILKTIAGGKV 345
>sp|O59394|HICD_PYRHO Isocitrate--homoisocitrate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1722 PE=1 SV=2
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 35 GGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMI 94
G G+V ++ + +FEP + + GK +ANP +L + ML ++ L G +I
Sbjct: 229 GSIGIVPSGNYGEDIALFEP-IHGSAPDIAGKGIANPIGAILSAAMMLDYLGLD--GSII 285
Query: 95 RNAVNRVLKAGKVRTKDLGGQSTTQEYTYAVIANL 129
AV R ++ G + T D+ G++TT E T +I+ +
Sbjct: 286 WKAVGRYVRRGNL-TPDMEGRATTLEVTNGIISEI 319
>sp|Q58991|AKSF_METJA Homoisocitrate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=aksF PE=1 SV=3
Length = 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 33 LVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGD 92
L+GG G+ A+ + +FEP + + GK +ANP A +L + ++ + GD
Sbjct: 246 LIGGLGLAPSANIGDDKALFEP-VHGSAPDIAGKGIANPMASILSIAMLFDYIGEKEKGD 304
Query: 93 MIRNAVNRVLKAGKVRTKDLGGQSTTQE 120
+IR AV L KV T DLGG T++
Sbjct: 305 LIREAVKYCLINKKV-TPDLGGDLKTKD 331
>sp|P70792|TTUC4_AGRVI Probable tartrate dehydrogenase/decarboxylase TtuC'
OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1
Length = 358
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 33 LVGGAGVVAGASWSPE---CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQY 89
L G GV A+ PE +FEP + + GK +ANP A + +ML H+ +
Sbjct: 255 LAGSLGVAPTANIDPERRFPSMFEPIHGSAF-DITGKGIANPVATFWTAAQMLEHLGEKD 313
Query: 90 YGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAV 125
+ +AV RV +AG + T D+GG + TQ+ T AV
Sbjct: 314 AATRLMSAVERVTEAG-ILTPDVGGTANTQQVTDAV 348
>sp|P70787|TTUC2_AGRVI Probable tartrate dehydrogenase/decarboxylase TtuC OS=Agrobacterium
vitis GN=ttuC PE=2 SV=1
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 33 LVGGAGVVAGASWSPE---CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQY 89
L G GV A+ PE +FEP + + GK +ANP A + +ML H+ +
Sbjct: 255 LAGSLGVAPTANIDPERRFPSMFEPIHGSAF-DITGKGIANPVATFWTAAQMLEHLGEKD 313
Query: 90 YGDMIRNAVNRVLKAGKVRTKDLGGQSTTQEYTYAV 125
+ +AV RV +AG + T D+GG + TQ+ T AV
Sbjct: 314 AATRLMSAVERVTEAG-ILTPDVGGTADTQQVTDAV 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,809,937
Number of Sequences: 539616
Number of extensions: 1778654
Number of successful extensions: 4968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 4839
Number of HSP's gapped (non-prelim): 274
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)