BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy934
(143 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FY2|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase
Provide Insight Into Regulation Of Acetylcholine
Synthesis
pdb|2FY3|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase
Provides Insight Into Regulation Of Acetylcholine
Synthesis
pdb|2FY4|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase
Provide Insight Into Regulation Of Acetylcholine
Synthesis
pdb|2FY5|A Chain A, Structures Of Ligand Bound Human Choline Acetyltransferase
Provide Insight Into Regulation Of Acetylcholine
Synthesis
Length = 612
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 17 QTQIMTENIQGEGIDLHLLGLRQ--TALEHNIPCELFQDEAYKLSNEDNDFFFQ--EVAC 72
QT I G ID HLL LR+ A+ +P E+F DE Y +SN F +V
Sbjct: 486 QTAYTVMAITGMAIDNHLLALRELARAMCAALP-EMFMDETYLMSNR---FVLSTSQVPT 541
Query: 73 KSDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNL 131
++ F YGPVVP+GYG YNP+ TI+FC+S+F SC TS++KFA +++ESL + +L
Sbjct: 542 TTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCAATSSSKFAKAVEESLIDMRDL 600
>pdb|1T7Q|A Chain A, Crystal Structure Of The F565a Mutant Of Murine Carnitine
Acetyltransferase In Complex With Carnitine And Coa
pdb|1T7Q|B Chain B, Crystal Structure Of The F565a Mutant Of Murine Carnitine
Acetyltransferase In Complex With Carnitine And Coa
Length = 618
Score = 89.4 bits (220), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D M +GPV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMAFGPV 561
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L + L+++
Sbjct: 562 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 613
>pdb|1Q6X|A Chain A, Crystal Structure Of Rat Choline Acetyltransferase
pdb|1Q6X|B Chain B, Crystal Structure Of Rat Choline Acetyltransferase
Length = 644
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 17 QTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNEDNDFFFQ--EVACK 73
QT+ I G ID HLL LR+ A + P E+F DE Y +SN F +V
Sbjct: 499 QTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTT 555
Query: 74 SDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVE 133
+ F YGPVVP+GYG YNP+ I FC+S+F SC TS+ +FA ++ SL + +L
Sbjct: 556 MEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 615
Query: 134 SRK 136
SR+
Sbjct: 616 SRQ 618
>pdb|1T1U|A Chain A, Structural Insights And Functional Implications Of Choline
Acetyltransferase
Length = 639
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 17 QTQIMTENIQGEGIDLHLLGLRQTALEH-NIPCELFQDEAYKLSNEDNDFFFQ--EVACK 73
QT+ I G ID HLL LR+ A + P E+F DE Y +SN F +V
Sbjct: 498 QTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNR---FVLSTSQVPTT 554
Query: 74 SDSFMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVE 133
+ F YGPVVP+GYG YNP+ I FC+S+F SC TS+ +FA ++ SL + +L
Sbjct: 555 MEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCS 614
Query: 134 SRK 136
SR+
Sbjct: 615 SRQ 617
>pdb|1NDF|A Chain A, Carnitine Acetyltransferase In Complex With Carnitine
pdb|1NDF|B Chain B, Carnitine Acetyltransferase In Complex With Carnitine
pdb|1NDI|A Chain A, Carnitine Acetyltransferase In Complex With Coa
pdb|1NDI|B Chain B, Carnitine Acetyltransferase In Complex With Coa
Length = 596
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D M +GPV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMFFGPV 540
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L + L+++
Sbjct: 541 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 592
>pdb|2H3P|A Chain A, Crystal Structure Of Murine Carnitine Acetyltransferase In
Complex With Carnitine And Acetyl-Coa
pdb|2H3P|B Chain B, Crystal Structure Of Murine Carnitine Acetyltransferase In
Complex With Carnitine And Acetyl-Coa
pdb|2H3U|A Chain A, Crystal Structure Of Murine Carnitine Acetyltransferase In
Complex With Carnitine And Coa
pdb|2H3U|B Chain B, Crystal Structure Of Murine Carnitine Acetyltransferase In
Complex With Carnitine And Coa
Length = 599
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D M +GPV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVMFFGPV 543
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L + L+++
Sbjct: 544 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595
>pdb|1NM8|A Chain A, Structure Of Human Carnitine Acetyltransferase: Molecular
Basis For Fatty Acyl Transfer
pdb|1S5O|A Chain A, Structural And Mutational Characterization Of L-Carnitine
Binding To Human Carnitine Acetyltransferase
Length = 616
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ + +V K+D M +GPV
Sbjct: 490 IRGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFH-LSTSQVPAKTDCVMFFGPV 548
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVES 134
VPDGYG YNP EA I F +SA+ SC T+AA+ A L+++L + L++S
Sbjct: 549 VPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 599
>pdb|2H3W|A Chain A, Crystal Structure Of The S554aM564G MUTANT OF MURINE
Carnitine Acetyltransferase In Complex With
Hexanoylcarnitine And Coa
pdb|2H3W|B Chain B, Crystal Structure Of The S554aM564G MUTANT OF MURINE
Carnitine Acetyltransferase In Complex With
Hexanoylcarnitine And Coa
Length = 599
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D +GPV
Sbjct: 485 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTAQVPAKTDCVGFFGPV 543
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L + L+++
Sbjct: 544 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 595
>pdb|1T7N|A Chain A, Crystal Structure Of The M564g Mutant Of Murine Crat
pdb|1T7O|A Chain A, Crystal Structure Of The M564g Mutant Of Murine Carnitine
Acetyltransferase In Complex With Carnitine
Length = 618
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D +GPV
Sbjct: 503 IRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN-LSTSQVPAKTDCVGFFGPV 561
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESR 135
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L + L+++
Sbjct: 562 VPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNH 613
>pdb|1NDB|A Chain A, Crystal Structure Of Carnitine Acetyltransferase
pdb|1NDB|B Chain B, Crystal Structure Of Carnitine Acetyltransferase
Length = 596
Score = 84.0 bits (206), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 25 IQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGYGPV 83
I+GE D HLLGL+ A+E + ++F D +Y ++ N +V K+D +GPV
Sbjct: 482 IRGEAFDRHLLGLKLQAIEDLVSXPDIFXDTSYAIAXHFN-LSTSQVPAKTDCVXFFGPV 540
Query: 84 VPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESL 125
VPDGYG YNP EA I F VSA+ SC T+AA+ A L+++L
Sbjct: 541 VPDGYGICYNPXEAHINFSVSAYNSCAETNAARXAHYLEKAL 582
>pdb|1XMD|A Chain A, M335v Mutant Structure Of Mouse Carnitine
Octanoyltransferase
pdb|1XMD|B Chain B, M335v Mutant Structure Of Mouse Carnitine
Octanoyltransferase
Length = 612
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 17 QTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSD 75
++M + G+G D HLLGL A E +P ELF+D + S +F S
Sbjct: 490 HNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------ST 543
Query: 76 SFMGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFA 118
S +GY G VVP +GYG Y+ R+ V S+++SC T A K
Sbjct: 544 SLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLV 593
>pdb|1XMC|A Chain A, C323m Mutant Structure Of Mouse Carnitine
Octanoyltransferase
pdb|1XMC|B Chain B, C323m Mutant Structure Of Mouse Carnitine
Octanoyltransferase
Length = 612
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 17 QTQIMTENIQGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSD 75
++M + G+G D HLLGL A E +P ELF+D + S +F S
Sbjct: 490 HNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------ST 543
Query: 76 SFMGY----GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFA 118
S +GY G VVP +GYG Y+ R+ V S+++SC T A K
Sbjct: 544 SLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLV 593
>pdb|1XL7|A Chain A, Crystal Structure Of Mouse Carnitine Octanoyltransferase
pdb|1XL7|B Chain B, Crystal Structure Of Mouse Carnitine Octanoyltransferase
pdb|1XL8|A Chain A, Crystal Structure Of Mouse Carnitine Octanoyltransferase
In Complex With Octanoylcarnitine
pdb|1XL8|B Chain B, Crystal Structure Of Mouse Carnitine Octanoyltransferase
In Complex With Octanoylcarnitine
Length = 612
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 26 QGEGIDLHLLGLRQTALEHNIPC-ELFQDEAYKLSNEDNDFFFQEVACKSDSFMGY---- 80
G+G D HLLGL A E +P ELF+D + S +F S S +GY
Sbjct: 499 HGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVL------STSLVGYLRVQ 552
Query: 81 GPVVP---DGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSL 121
G VVP +GYG Y+ R+ V S+++SC T A K +
Sbjct: 553 GVVVPXVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQXI 596
>pdb|2DEB|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Space Group C2221
pdb|2DEB|B Chain B, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Space Group C2221
pdb|2FYO|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Space Group P43212
Length = 653
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 19 QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
Q+ E G+G D HL LR TA N+P EL+ D AY+ N N + + S
Sbjct: 536 QLTKEAAXGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQXNH-NILSTSTLNSPAVS 593
Query: 77 FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
G+ PVVPDG+G +Y + I VS++ +A +F + + L I + +E +
Sbjct: 594 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 650
Query: 137 IST 139
I T
Sbjct: 651 IKT 653
>pdb|2FW3|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Complex With Antidiabetic Drug St1326
pdb|2RCU|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Complex With R-3-(Hexadecanoylamino)-4-
(Trimethylazaniumyl)butanoate
pdb|2RCU|B Chain B, Crystal Structure Of Rat Carnitine Palmitoyltransferase 2
In Complex With R-3-(Hexadecanoylamino)-4-
(Trimethylazaniumyl)butanoate
Length = 653
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 19 QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
Q+ E G+G D HL LR TA N+P EL+ D AY+ N N + + S
Sbjct: 536 QLTKEAAMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNH-NILSTSTLNSPAVS 593
Query: 77 FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
G+ PVVPDG+G +Y + I VS++ +A +F + + L I + +E +
Sbjct: 594 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 650
Query: 137 IST 139
I T
Sbjct: 651 IKT 653
>pdb|2H4T|A Chain A, Crystal Structure Of Rat Carnitine Palmitoyltransferase Ii
pdb|2H4T|B Chain B, Crystal Structure Of Rat Carnitine Palmitoyltransferase Ii
Length = 626
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 19 QIMTENIQGEGIDLHLLGLR--QTALEHNIPCELFQDEAYKLSNEDNDFFFQEVACKSDS 76
Q+ E G+G D HL LR TA N+P EL+ D AY+ N N + + S
Sbjct: 511 QLTKEATMGQGFDRHLYALRYLATARGLNLP-ELYLDPAYQQMNH-NILSTSTLNSPAVS 568
Query: 77 FMGYGPVVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLVESRK 136
G+ PVVPDG+G +Y + I VS++ +A +F + + L I + +E +
Sbjct: 569 LGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDIFDALEGKA 625
Query: 137 I 137
I
Sbjct: 626 I 626
>pdb|1I60|A Chain A, Structural Genomics, Ioli Protein
pdb|1I6N|A Chain A, 1.8 A Crystal Structure Of Ioli Protein With A Binding
Zinc Atom
Length = 278
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 27 GEG---IDLHLLGLRQTALEHNIPCELFQDEAYKLSNED 62
G+G +D HL L++ + ELF+ E YKL+ E+
Sbjct: 221 GQGAIDLDAHLSALKEIGFSDVVSVELFRPEYYKLTAEE 259
>pdb|2EQX|A Chain A, Solution Structure Of The Back Domain Of Kelch Repeat And
Btb Domain-Containing Protein 4
Length = 105
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Query: 83 VVPDGYGCSYNPREATIVFCVSAFKSCLTTSAAKFATSLDESLSAIGNLV 132
++ DG CS NP EA + A+ + FA SL SL IG V
Sbjct: 60 IISDGVPCSQNPTEA-----IEAWINFNKEEREAFAESLRTSLKEIGENV 104
>pdb|2J5L|A Chain A, Structure Of A Plasmodium Falciparum Apical Membrane
Antigen 1-Fab F8.12.19 Complex
Length = 581
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 42 LEHNIPCELFQDEAYK 57
+EHN PC L++DE K
Sbjct: 405 VEHNFPCSLYKDEIKK 420
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,620,383
Number of Sequences: 62578
Number of extensions: 141106
Number of successful extensions: 354
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 316
Number of HSP's gapped (non-prelim): 20
length of query: 143
length of database: 14,973,337
effective HSP length: 89
effective length of query: 54
effective length of database: 9,403,895
effective search space: 507810330
effective search space used: 507810330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)