BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9347
(105 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
M YLH+ VH L+S N L+D ++ VK+ DFGL+ L + ++ S W+AP
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS-AAGTPEWMAP 208
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
E V+ P+ +K DVYSF +IL E+ P+
Sbjct: 209 E-----VLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
M YLH+ VH L+S N L+D ++ VK+ DFGL+ L S W+AP
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEWMAP 208
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
E V+ P+ +K DVYSF +IL E+ P+
Sbjct: 209 E-----VLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 146 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 198
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 199 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 138 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 190
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 191 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 144 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 196
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 197 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 143 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 195
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 196 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 146 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 198
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 199 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 145 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 197
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 198 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 141 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 193
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 194 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 165 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 217
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 218 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY---NK---- 53
M YL S + VH L + NC++D +F VK++DFGL + D YY NK
Sbjct: 164 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGL------ARDMYDKEYYSVHNKTGAK 216
Query: 54 --LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ W+A E L T K DV+SF ++L E++ RG P
Sbjct: 217 LPVKWMALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M YL S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 145 MKYLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 204 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 147 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 206 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 146 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 205 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 144 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 203 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 147 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 206 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 151 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 210 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 205 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 264 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M +L S + VH L + NC++D +F VK++DFGL E N L W+
Sbjct: 146 MKFLASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 205 ALESLQTQKF-----TTKSDVWSFGVLLWELMTRGAP 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ VVK++DFGL+ L T T + + W APE
Sbjct: 143 MEYLEKKNF-IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 201
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 202 SLAYNTF-----SIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 118 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPE 176
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 177 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 124 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 183 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 133 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 192 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 117 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 175
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 176 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 118 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 176
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 177 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 113 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 171
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 172 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL----LW 56
M YLH+ + +H L+S+N + VKI DFG L T S+ + +L LW
Sbjct: 117 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLSGSILW 172
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 173 MAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL----LW 56
M YLH+ + +H L+S+N + VKI DFG L T S+ + +L LW
Sbjct: 137 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLSGSILW 192
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 193 MAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL----LW 56
M YLH+ + +H L+S+N + VKI DFG L T S+ + +L LW
Sbjct: 145 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFG---LATEKSRWSGSHQFEQLSGSILW 200
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 201 MAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LRS+N L+ + KI+DFGL L +E T + W APE + G
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE----AALYGR 182
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+V +G PY
Sbjct: 183 -FTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 122 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 181 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 116 MAYLEEASV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 175 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ V KI+DFGL + +E T + W APE I
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-----AINFG 187
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF--- 187
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 188 --TIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL S + +H L + NCL++ + VVK+SDFGL+ E T + W PE
Sbjct: 133 MEYLESKQF-LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPE 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+L S + K D+++F +++ EI G PYE
Sbjct: 192 VLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 331 MEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 390 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 370 MEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 429 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ V KI+DFGL + +E T + W APE I
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-----AINFG 360
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 117 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 173
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 174 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 119 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 175
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 176 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 144 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 200
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 201 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 117 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 173
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 174 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 122 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 178
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 179 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 122 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 178
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 179 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 145 MDYLHAKSI-IHRDLKSNNIFLHEDLTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 201
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 202 APEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 328 MEYLEKKNF-IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 387 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 122 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 181 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF--- 195
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 196 --TIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 128 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 187 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 129 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 188 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 129 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 188 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 129 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 188 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 122 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 181 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-----AINYG 185
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 137 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 196 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
M YL + VH L + NC++D F VK++DFGL E + + L W
Sbjct: 137 MEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
A E L T K DV+SF ++L E++ RG P
Sbjct: 196 ALESLQTYRF-----TTKSDVWSFGVLLWELLTRGAP 227
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-----AINYG 181
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF--- 193
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 194 --TIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-----AINYG 186
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF--- 187
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 188 --TIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 126 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 185 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 125 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 184 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF--- 192
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 193 --TIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 126 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 185 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF--- 196
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 197 --TIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF--- 193
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 194 --TIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE +
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF--- 197
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 198 --TIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 129 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 188 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 124 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 183 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 129 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 188 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE-----AINYG 187
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-----AINYG 185
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ KI+DFGL L +E T + W APE I
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-----AINYG 180
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL----LW 56
M YLH+ + +H L+S+N + VKI DFG L T S+ + +L LW
Sbjct: 133 MDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSHQFEQLSGSILW 188
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 189 MAPEV--IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL----LW 56
M YLH+ + +H L+S+N + VKI DFG L T S+ + +L LW
Sbjct: 133 MDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSHQFEQLSGSILW 188
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 189 MAPEV--IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 119 MAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 178 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 116 MAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 175 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 114 MAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 173 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 117 MAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 176 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 125 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 184 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL +H L + NCL+ +VK++DFGL+ L T T + + W APE
Sbjct: 126 MEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
L + K DV++F ++L EI G PY
Sbjct: 185 SLAYNKF-----SIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + + +H L + NCL+ V+K+SDFG+ + T + + W +PE
Sbjct: 136 MAYLEEACV-IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
V S + K DV+SF +++ E+ G PYE
Sbjct: 195 -----VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M Y+ +H LR++N L+ + KI+DFGL + +E T + W APE
Sbjct: 123 MAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ T K DV+SF I+L EIV G PY
Sbjct: 182 AINFGCF-----TIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN---KLLWV 57
M YLH+ + +H L+S+N + VKI DFGL T S + + +LW+
Sbjct: 121 MDYLHAKSI-IHRDLKSNNIFLHEDNTVKIGDFGL--ATVKSRWSGSHQFEQLSGSILWM 177
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+ + + +P + + DVY+F I+L E++ PY
Sbjct: 178 APEV--IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE----AALYGR 358
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 359 -FTIKSDVWSFGILLTELTTKG 379
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE----AALYGR 181
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 182 -FTIKSDVWSFGILLTELTTKGRVPY 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 184
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 185 -FTIKSDVWSFGILLTELTTKGRVPY 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 188
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 189 -FTIKSDVWSFGILLTELTTKG 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE----AALYGR 188
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 189 -FTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 180
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 181 -FTIKSDVWSFGILLTELTTKG 201
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 182
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 183 -FTIKSDVWSFGILLTELTTKG 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 357
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 358 -FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 357
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 358 -FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 357
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L E+ +G PY
Sbjct: 358 -FTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH LR++N L+ V K++DFGL L +E T + W APE
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF--- 441
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 442 --TIKSDVWSFGILLTELTTKG 461
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTP-SEITKDSNYYNKLLWVAP 59
M YLH+ + +H ++S+N + VKI DFGL + + S + +LW+AP
Sbjct: 145 MDYLHAKNI-IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
E++ + +P + + DVYS+ I+L E++ PY
Sbjct: 204 EVIRMQ--DNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M Y+ +H LR++N L+ + KI+DFGL + +E T + W APE
Sbjct: 122 MAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ T K +V+SF I+L EIV G PY
Sbjct: 181 AINFGCF-----TIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTP-SEITKDSNYYNKLLWVAP 59
+ +LH + +H ++S+N L+D F KISDFGL + ++ S ++AP
Sbjct: 146 INFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L + P K D+YSF ++L EI+
Sbjct: 205 EALRGEITP------KSDIYSFGVVLLEII 228
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 1 MTYLHSSELG--VHGKLRSSNCL-IDGRFVVKISDFGLNILTTPSEI-TKDSNYYNKLLW 56
+ YLHS + +H L+ N L + G V+KI DFG T +I T +N W
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAW 169
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+APE V GS ++K DV+S+ IIL E++ R P++
Sbjct: 170 MAPE-----VFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 1 MTYLHSSELG--VHGKLRSSNCL-IDGRFVVKISDFGLNILTTPSEI-TKDSNYYNKLLW 56
+ YLHS + +H L+ N L + G V+KI DFG T +I T +N W
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAW 170
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+APE V GS ++K DV+S+ IIL E++ R P++
Sbjct: 171 MAPE-----VFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 19/95 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++ + VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 143 MAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 195
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W+APE L V T D++SF ++L EI
Sbjct: 196 VRWMAPESLKDGVF-----TTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 19/95 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++ + VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 144 MAYLNAKKF-VHRNLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 196
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W+APE L V T D++SF ++L EI
Sbjct: 197 VRWMAPESLKDGVF-----TTSSDMWSFGVVLWEI 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 19/95 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++ + VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 143 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 195
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W+APE L V T D++SF ++L EI
Sbjct: 196 VRWMAPESLKDGVF-----TTSSDMWSFGVVLWEI 225
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTP-SEITKDSNYYNKLLWVAP 59
+ +LH + +H ++S+N L+D F KISDFGL + ++ S + AP
Sbjct: 137 INFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L + P K D+YSF ++L EI+
Sbjct: 196 EALRGEITP------KSDIYSFGVVLLEII 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLH +++ +H L++ N L +K++DFG++ T + I + ++ W+APE
Sbjct: 121 LNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ P K DV+S I L E+ P+
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 141 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 190
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 191 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 144 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 193
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 194 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 144 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 193
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 194 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 227
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 145 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 194
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 195 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 138 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 187
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 188 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC++ F VKI DFG+ T+D ++YY K
Sbjct: 142 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 191
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 192 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH L ++N L+ V K++DFGL L +E T + W APE + G
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE----AALYGR 191
Query: 71 PATQKGDVYSFSIILEEIVVRG 92
T K DV+SF I+L E+ +G
Sbjct: 192 -FTIKSDVWSFGILLTELTTKG 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M +L S + +H L + NCL+D VK+SDFG+ + + W APE
Sbjct: 117 MAFLESHQF-IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE 175
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEV 97
V + K DV++F I++ E+ G PY++
Sbjct: 176 -----VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++ + VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 142 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 194
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV-VRGGPYE 96
+ W+APE L V T D++SF ++L EI + PY+
Sbjct: 195 VRWMAPESLKDGVF-----TTSSDMWSFGVVLWEITSLAEQPYQ 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++ + VH L + NC++ F VKI DFG+ + ++ YY K
Sbjct: 143 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM------TRDIYETAYYRKGGKGLLP 195
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W+APE L V T D++SF ++L EI
Sbjct: 196 VRWMAPESLKDGVF-----TTSSDMWSFGVVLWEI 225
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 19/104 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNIL-----TTPS--------EITKD 47
M YLHS + +H L S NCL+ V ++DFGL L T P + K
Sbjct: 121 MAYLHSMNI-IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 48 SNYYNKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
W+APE+ I G +K DV+SF I+L EI+ R
Sbjct: 180 YTVVGNPYWMAPEM-----INGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTP-SEITKDSNYYNKLLWVAP 59
+ +LH + +H ++S+N L+D F KISDFGL + ++ ++AP
Sbjct: 146 INFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L + P K D+YSF ++L EI+
Sbjct: 205 EALRGEITP------KSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTP-SEITKDSNYYNKLLWVAP 59
+ +LH + +H ++S+N L+D F KISDFGL + ++ ++AP
Sbjct: 140 INFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L + P K D+YSF ++L EI+
Sbjct: 199 EALRGEITP------KSDIYSFGVVLLEII 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++++ VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 173 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 225
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYE 96
+ W++PE L V T DV+SF ++L EI PY+
Sbjct: 226 VRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIATLAEQPYQ 264
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 25/99 (25%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD---SNYYNK---- 53
M YL++++ VH L + NC + F VKI DFG+ T+D ++YY K
Sbjct: 138 MAYLNANKF-VHRDLAARNCXVAEDFTVKIGDFGM---------TRDIYETDYYRKGGKG 187
Query: 54 ---LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W++PE L V T DV+SF ++L EI
Sbjct: 188 LLPVRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIA 221
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++++ VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 151 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 203
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYE 96
+ W++PE L V T DV+SF ++L EI PY+
Sbjct: 204 VRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIATLAEQPYQ 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 152 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 205
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+APE + V T + DV+SF ++L EI G PY
Sbjct: 206 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 20/104 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL++++ VH L + NC++ F VKI DFG+ + +++YY K
Sbjct: 151 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 203
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYE 96
+ W++PE L V T DV+SF ++L EI PY+
Sbjct: 204 VRWMSPESLKDGVF-----TTYSDVWSFGVVLWEIATLAEQPYQ 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 152 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 205
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+APE + V T + DV+SF ++L EI G PY
Sbjct: 206 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 159 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 211
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 212 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 157 MEYL-ASQKCIHRDLTARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 209
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 210 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L +S +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 157 MEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 210
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+APE + V T + DV+SF ++L EI G PY
Sbjct: 211 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L +S +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 157 MEFL-ASRKXIHRDLAARNILLSEKNVVKIXDFGL-----ARDIYKDPDYVRKGDARLPL 210
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+APE + V T + DV+SF ++L EI G PY
Sbjct: 211 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 211 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 264
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 265 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 198 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 251
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 252 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 292
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 213 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 266
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 267 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 307
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 204 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 257
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 258 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 298
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 163 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 216
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 217 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 257
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 206 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 259
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 260 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 300
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD +Y K L
Sbjct: 161 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIYKDPDYVRKGDARLPL 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 215 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ VK++DFG+ T ++I +++ + W+APE
Sbjct: 117 LDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPE 174
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ RG P
Sbjct: 175 -----VIKQSAYDSKADIWSLGITAIEL-ARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ VK++DFG+ T ++I +++ + W+APE
Sbjct: 137 LDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPE 194
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ RG P
Sbjct: 195 -----VIKQSAYDSKADIWSLGITAIEL-ARGEP 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL +S+ +H L + N L+ V+KI+DFGL + K +N + W+AP
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L V T + DV+SF +++ EI GG PY
Sbjct: 229 EALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL +S+ +H L + N L+ V+KI+DFGL + K +N + W+AP
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L V T + DV+SF +++ EI GG PY
Sbjct: 229 EALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVA 58
M YL++ + VH L + NC++ F VKI DFG+ +I T K + W+A
Sbjct: 143 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPVRWMA 200
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L V T D++SF ++L EI
Sbjct: 201 PESLKDGVF-----TTSSDMWSFGVVLWEI 225
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 162 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 214
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 215 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ VK++DFG+ T ++I K + + W+APE
Sbjct: 117 LDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNXFVGTPFWMAPE 174
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ RG P
Sbjct: 175 -----VIKQSAYDSKADIWSLGITAIEL-ARGEP 202
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL++ + VH L + NC++ F VKI DFG+ + K + W+AP
Sbjct: 140 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEI 88
E L V T D++SF ++L EI
Sbjct: 199 ESLKDGVF-----TTSSDMWSFGVVLWEI 222
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVA 58
M YL++ + VH L + NC++ F VKI DFG+ +I T K + W+A
Sbjct: 143 MAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPVRWMA 200
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L V T D++SF ++L EI
Sbjct: 201 PESLKDGVF-----TTSSDMWSFGVVLWEI 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ VK++DFG+ T ++I K + + W+APE
Sbjct: 132 LDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNXFVGTPFWMAPE 189
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ RG P
Sbjct: 190 -----VIKQSAYDSKADIWSLGITAIEL-ARGEP 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNKLLWV 57
M YL S+LG VH L + N L+D V K+SDFGL+ + P + + W
Sbjct: 164 MRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
APE + + DV+SF +++ E++ G PY
Sbjct: 222 APEAIAFRTF-----SSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V+KI+DFGL + + +YY K
Sbjct: 216 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGL------ARDINNIDYYKKTTNGRLP 268
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 269 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 16/86 (18%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H LR++N L+ V KI+DFGL + I W APE I
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIK----------WTAPE-----AINFG 344
Query: 71 PATQKGDVYSFSIILEEIVVRGG-PY 95
T K DV+SF I+L EIV G PY
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ + VK++DFG+ T ++I +++ + W+APE
Sbjct: 133 LDYLHS-EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPE 190
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ +G P
Sbjct: 191 -----VIQQSAYDSKADIWSLGITAIEL-AKGEP 218
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S+LG VH L + N L+D V K+SDFGL+ + E D+ Y +
Sbjct: 164 MRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTTGGKIPI 218
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W APE + + DV+SF +++ E++ G PY
Sbjct: 219 RWTAPEAIAFRTF-----SSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL++++ VH L + NC++ F VKI DFG+ + K + W++P
Sbjct: 145 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L V T DV+SF ++L EI
Sbjct: 204 ESLKDGVF-----TTYSDVWSFGVVLWEIA 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL++++ VH L + NC++ F VKI DFG+ + K + W++P
Sbjct: 136 MAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
E L V T DV+SF ++L EI
Sbjct: 195 ESLKDGVF-----TTYSDVWSFGVVLWEIA 219
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 156 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 208
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 209 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 19/99 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-------K 53
M YL S VH L + NCL+ +VKI DFG+ S ++YY
Sbjct: 146 MVYLASQHF-VHRDLATRNCLVGANLLVKIGDFGM------SRDVYSTDYYRVGGHTMLP 198
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
+ W+ PE I T + DV+SF +IL EI G
Sbjct: 199 IRWMPPE-----SIMYRKFTTESDVWSFGVILWEIFTYG 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 152 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 204
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 205 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YL S VH L + N L++ VKI+DFGL L + D +YY +
Sbjct: 128 MEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 181
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W APE L + +++ DV+SF ++L E+
Sbjct: 182 IFWYAPESLSDNIF-----SRQSDVWSFGVVLYEL 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 148 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 200
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 201 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 155 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 207
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 208 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YL S VH L + N L++ VKI+DFGL L + D +YY +
Sbjct: 127 MEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 180
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W APE L + +++ DV+SF ++L E+
Sbjct: 181 IFWYAPESLSDNIF-----SRQSDVWSFGVVLYEL 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 204 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 256
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 257 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L SS +H L + N L+ VVKI DFGL +I K+ +Y K L
Sbjct: 212 MEFL-SSRKCIHRDLAARNILLSENNVVKICDFGL-----ARDIYKNPDYVRKGDTRLPL 265
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+APE + + + K DV+S+ ++L EI GG PY
Sbjct: 266 KWMAPESIFDKIY-----STKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL +S+ +H L + N L+ V++I+DFGL + + +YY K
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMRIADFGL------ARDINNIDYYKKTTNGRLP 222
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L V T + DV+SF +++ EI GG PY
Sbjct: 223 VKWMAPEALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLH +++ +H L++ N L +K++DFG++ T + I + ++ W+APE
Sbjct: 148 LNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPE 205
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ P K DV+S I L E+ P+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITK-DSNYYNKLLWVAP 59
M YL + VH L + NCL+ VVKI+DFGL+ ++ K D N + W+ P
Sbjct: 187 MAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
E I + T + DV+++ ++L EI G PY
Sbjct: 246 E-----SIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVA 58
M +L S + +H L + N L+ + VVKI DFGL +I P + K + L W+A
Sbjct: 152 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK-GDARLPLKWMA 209
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
PE + V T + DV+SF ++L EI G PY
Sbjct: 210 PETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVA 58
M +L S + +H L + N L+ + VVKI DFGL +I P + K + L W+A
Sbjct: 152 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK-GDARLPLKWMA 209
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
PE + V T + DV+SF ++L EI G PY
Sbjct: 210 PETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS + +H L++ N L+ ++++DFG++ + +DS + W+APE
Sbjct: 130 LNFLHSKRI-IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ + +P K D++S I L E+ P+
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS + +H L++ N L+ ++++DFG++ + +DS + W+APE
Sbjct: 122 LNFLHSKRI-IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPE 179
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ + +P K D++S I L E+ P+
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLH +++ +H L++ N L +K++DFG++ T I + ++ W+APE
Sbjct: 148 LNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNT-RXIQRRDSFIGTPYWMAPE 205
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ P K DV+S I L E+ P+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YL S VH L + N L++ VKI+DFGL L + D +YY +
Sbjct: 140 MEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 193
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W APE L + +++ DV+SF ++L E+
Sbjct: 194 IFWYAPESLSDNIF-----SRQSDVWSFGVVLYEL 223
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
M YL S + +H L + N L+ V+KI+DFGL + K +N + W+AP
Sbjct: 163 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP 221
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L + T + DV+SF ++L EI GG PY
Sbjct: 222 EALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 163 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 215
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 216 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 163 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 215
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 216 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + VH L + N L+ V K+SDFG LT + T+D+ + W APE
Sbjct: 121 MEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKL-PVKWTAPE 175
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEI 88
L + K DV+SF I+L EI
Sbjct: 176 ALREAAF-----STKSDVWSFGILLWEI 198
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKD-SNYYNKLLWVAP 59
M YL +S+ +H L + N L+ V+KI+DFGL + K+ +N + W+AP
Sbjct: 170 MEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAP 228
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L V T + DV+SF +++ EI GG PY
Sbjct: 229 EALFDRVY-----THQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------LLWVAPELLPV 64
VH L + N L+ VVKI DFGL +I DSNY + + W+APE L
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGL-----ARDIMSDSNYVVRGNARLPVKWMAPESLFE 248
Query: 65 TVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
+ T K DV+S+ I+L EI G PY
Sbjct: 249 GIY-----TIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S + +H L + N L+ V+KI+DFGL + +YY K
Sbjct: 163 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGL------ARDIHHIDYYKKTTNGRLP 215
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
+ W+APE L + T + DV+SF ++L EI GG PY
Sbjct: 216 VKWMAPEALFDRIY-----THQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLH +++ +H L++ N L +K++DFG++ T I + + W+APE
Sbjct: 148 LNYLHDNKI-IHRDLKAGNILFTLDGDIKLADFGVSAKNT-RXIQRRDXFIGTPYWMAPE 205
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
++ P K DV+S I L E+ P+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL-WVAP 59
+ YLH+ + +H ++S N L+D FV KI+DFG++ T + T L ++ P
Sbjct: 152 LHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
E I G T+K DVYSF ++L E++
Sbjct: 211 EYF----IKGR-LTEKSDVYSFGVVLFEVLC 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD + K L
Sbjct: 161 MEFLASRKX-IHRDLAARNILLSEKNVVKICDFGL-----ARDIXKDPDXVRKGDARLPL 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 215 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS E +H ++++N L+ + VK++DFG+ T ++I K + + W+APE
Sbjct: 129 LDYLHS-ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRNXFVGTPFWMAPE 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
VI S K D++S I E+ +G P
Sbjct: 187 -----VIKQSAYDFKADIWSLGITAIEL-AKGEP 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD + K L
Sbjct: 161 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIXKDPDXVRKGDARLPL 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 215 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M +L S + +H L + N L+ + VVKI DFGL +I KD + K L
Sbjct: 161 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGL-----ARDIXKDPDXVRKGDARLPL 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
W+APE + V T + DV+SF ++L EI G PY K
Sbjct: 215 KWMAPETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVA 58
M +L S + +H L + N L+ + VVKI DFGL +I P + K L W+A
Sbjct: 161 MEFLASRKC-IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL-PLKWMA 218
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYEVAK 99
PE + V T + DV+SF ++L EI G PY K
Sbjct: 219 PETIFDRVY-----TIQSDVWSFGVLLWEIFSLGASPYPGVK 255
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS+++ +H ++S N L+ VK++DFG TP E +K S W+APE
Sbjct: 130 LEFLHSNQV-IHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ VT P K D++S I+ E++ PY
Sbjct: 188 V--VTRKAYGP---KVDIWSLGIMAIEMIEGEPPY 217
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 137 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 191
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W APE I T DV+S+ I++ E+V G PY
Sbjct: 192 RWTAPE-----AIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNKLLWV 57
M YL +++G VH L + N L++ V K+SDFGL+ I P + + + W
Sbjct: 158 MRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
APE I T DV+S+ I++ E++ G PY
Sbjct: 216 APE-----AIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS+++ +H ++S N L+ VK++DFG TP E +K S W+APE
Sbjct: 129 LEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEMVGTPYWMAPE 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ VT P K D++S I+ E++ PY
Sbjct: 187 V--VTRKAYGP---KVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS+++ +H ++S N L+ VK++DFG TP E +K S W+APE
Sbjct: 129 LEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPE 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ VT P K D++S I+ E++ PY
Sbjct: 187 V--VTRKAYGP---KVDIWSLGIMAIEMIEGEPPY 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNKLLWVA 58
M YL + VH L + N L++ V K+SDFGL+ + P S + W A
Sbjct: 160 MKYLANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
PE I T DV+SF I++ E++ G PY
Sbjct: 219 PE-----AISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS+++ +H ++S N L+ VK++DFG TP E +K S W+APE
Sbjct: 129 LEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYWMAPE 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ VT P K D++S I+ E++ PY
Sbjct: 187 V--VTRKAYGP---KVDIWSLGIMAIEMIEGEPPY 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 120 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 173
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE I + K DV+SF +++ E G PY K
Sbjct: 174 VKWYAPE-----CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + VH L + N L+ V K+SDFG LT + T+D+ + W APE
Sbjct: 130 MEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKL-PVKWTAPE 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEI 88
L + K DV+SF I+L EI
Sbjct: 185 ALREKKF-----STKSDVWSFGILLWEI 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS+++ +H ++S N L+ VK++DFG TP E +K S W+APE
Sbjct: 130 LEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYWMAPE 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ VT P K D++S I+ E++ PY
Sbjct: 188 V--VTRKAYGP---KVDIWSLGIMAIEMIEGEPPY 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 138 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 191
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE + + K DV+SF +++ E G PY K
Sbjct: 192 VKWYAPECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 140 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 193
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE + + K DV+SF +++ E G PY K
Sbjct: 194 VKWYAPECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 140 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 193
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE + + K DV+SF +++ E G PY K
Sbjct: 194 VKWYAPECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 124 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 177
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE + + K DV+SF +++ E G PY K
Sbjct: 178 VKWYAPECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 130 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 183
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE + + K DV+SF +++ E G PY K
Sbjct: 184 VKWYAPECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + VH L + N L+ V K+SDFG LT + T+D+ + W APE
Sbjct: 302 MEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKL-PVKWTAPE 356
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEI 88
L + K DV+SF I+L EI
Sbjct: 357 ALREKKF-----STKSDVWSFGILLWEI 379
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 118 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 171
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE I + K DV+SF +++ E G PY K
Sbjct: 172 VKWYAPE-----CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL + VH L + N L+ V K+SDFG LT + T+D+ + W APE
Sbjct: 115 MEYLEGNNF-VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKL-PVKWTAPE 169
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEI 88
L + K DV+SF I+L EI
Sbjct: 170 ALREKKF-----STKSDVWSFGILLWEI 192
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEI-TKDSNYYNKLLWVAP 59
M YL + +H L + N L+ +V KI+DFG L+ E+ K + + W+A
Sbjct: 152 MDYLSQKQF-IHRNLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRLPVRWMAI 207
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L +V T DV+S+ ++L EIV GG PY
Sbjct: 208 ESLNYSVY-----TTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEI-TKDSNYYNKLLWVAP 59
M YL + +H L + N L+ +V KI+DFG L+ E+ K + + W+A
Sbjct: 145 MDYLSQKQF-IHRDLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRLPVRWMAI 200
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L +V T DV+S+ ++L EIV GG PY
Sbjct: 201 ESLNYSVY-----TTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEI-TKDSNYYNKLLWVAP 59
M YL + +H L + N L+ +V KI+DFG L+ E+ K + + W+A
Sbjct: 155 MDYLSQKQF-IHRDLAARNILVGENYVAKIADFG---LSRGQEVYVKKTMGRLPVRWMAI 210
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L +V T DV+S+ ++L EIV GG PY
Sbjct: 211 ESLNYSVY-----TTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 152 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 204
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 205 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 245
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL-WVAP 59
+ YLH+ + +H ++S N L+D FV KI+DFG++ T T L ++ P
Sbjct: 152 LHYLHTRAI-IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
E I G T+K DVYSF ++L E++
Sbjct: 211 EYF----IKGR-LTEKSDVYSFGVVLFEVLC 236
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 129 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 181
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 182 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 127 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 179
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 180 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 124 LAYLESKRF-VHRDIAARNVLVSATDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 176
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 177 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 131 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 185
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 186 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 131 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 185
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 186 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 126 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 178
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 179 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 124 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 176
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 177 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YL S VH + + N L+ VK+ DFGL+ S K S + W+APE
Sbjct: 124 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ T DV+ F + + EI++ G P++ K
Sbjct: 183 SINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 124 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 176
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 177 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----LL 55
M YL S VH L + N L++ VKI+DFGL L + KD + +
Sbjct: 124 MEYLGSRRC-VHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDXXVVREPGQSPIF 179
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
W APE L + +++ DV+SF ++L E+
Sbjct: 180 WYAPESLSDNIF-----SRQSDVWSFGVVLYEL 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-------K 53
M YL VH L + NCL+ VVKI DFG+ S ++YY
Sbjct: 171 MVYLAGLHF-VHRDLATRNCLVGQGLVVKIGDFGM------SRDIYSTDYYRVGGRTMLP 223
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
+ W+ PE I T + DV+SF ++L EI G
Sbjct: 224 IRWMPPE-----SILYRKFTTESDVWSFGVVLWEIFTYG 257
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 121 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 173
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 174 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 482 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 535
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE I + K DV+SF +++ E G PY K
Sbjct: 536 VKWYAPE-----CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 158 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 212
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 213 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 255
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S VH L + N L+ + KISDFGL+ + D NYY
Sbjct: 483 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLS-----KALRADENYYKAQTHGKWP 536
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
+ W APE I + K DV+SF +++ E G PY K
Sbjct: 537 VKWYAPE-----CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 148 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 202
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 203 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL+ + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 504 LAYLESKRF-VHRDIAARNVLVSSNDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 556
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 557 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 597
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL------LWVAPELLPV 64
VH L + N L++ V K+SDFGL+ + T D Y + L W APE
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPE---- 184
Query: 65 TVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
I T DV+S+ I++ E++ G PY
Sbjct: 185 -AIQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
+ YL S VH + + N L+ VK+ DFGL S +DS YY +
Sbjct: 504 LAYLESKRF-VHRDIAARNVLVSATDCVKLGDFGL------SRYMEDSTYYKASKGKLPI 556
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
W+APE + T DV+ F + + EI++ G P++ K
Sbjct: 557 KWMAPESINFRRF-----TSASDVWMFGVCMWEILMHGVKPFQGVK 597
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL------LWVAPELLPV 64
VH L + N L++ V K+SDFGL+ + T D Y + L W APE
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPE---- 210
Query: 65 TVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
I T DV+S+ I++ E++ G PY
Sbjct: 211 -AIQYRKFTSASDVWSYGIVMWEVMSYGERPY 241
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNKLLWVA 58
M YL S + VH L + N L++ VKI DFGL I T T + + + W A
Sbjct: 139 MDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
PE L S DV+SF + L E++
Sbjct: 198 PECL-----MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNKLLWVA 58
M YL S + VH L + N L++ VKI DFGL I T T + + + W A
Sbjct: 127 MDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
PE L S DV+SF + L E++
Sbjct: 186 PECL-----MQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YLHS +H L + N L+D +VKI DFGL + + YY +
Sbjct: 130 MAYLHSQHY-IHRNLAARNVLLDNDRLVKIGDFGL-----AKAVPEGHEYYRVREDGDSP 183
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
+ W APE L DV+SF + L E++
Sbjct: 184 VFWYAPECLKEYKF-----YYASDVWSFGVTLYELLT 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-------K 53
M YL S VH L + NCL+ +VKI DFG+ S ++YY
Sbjct: 141 MVYLASQHF-VHRDLATRNCLVGENLLVKIGDFGM------SRDVYSTDYYRVGGHTMLP 193
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
+ W+ PE I T + DV+S ++L EI G
Sbjct: 194 IRWMPPE-----SIMYRKFTTESDVWSLGVVLWEIFTYG 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-------K 53
M YL VH L + NCL+ VVKI DFG+ S ++YY
Sbjct: 148 MVYLAGLHF-VHRDLATRNCLVGQGLVVKIGDFGM------SRDIYSTDYYRVGGRTMLP 200
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
+ W+ PE I T + DV+SF ++L EI G
Sbjct: 201 IRWMPPE-----SILYRKFTTESDVWSFGVVLWEIFTYG 234
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-------K 53
M YL VH L + NCL+ VVKI DFG+ S ++YY
Sbjct: 142 MVYLAGLHF-VHRDLATRNCLVGQGLVVKIGDFGM------SRDIYSTDYYRVGGRTMLP 194
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
+ W+ PE I T + DV+SF ++L EI G
Sbjct: 195 IRWMPPE-----SILYRKFTTESDVWSFGVVLWEIFTYG 228
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YLH+ +H L + N L+D +VKI DFGL + + YY +
Sbjct: 125 MAYLHAQHY-IHRALAARNVLLDNDRLVKIGDFGL-----AKAVPEGHEYYRVREDGDSP 178
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
+ W APE L DV+SF + L E++
Sbjct: 179 VFWYAPECLKECKF-----YYASDVWSFGVTLYELLT 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL VH L + N L+ R KISDFGL+ + D +YY
Sbjct: 123 MKYLEEKNF-VHRDLAARNVLLVNRHYAKISDFGLS-----KALGADDSYYTARSAGKWP 176
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
L W APE + + + DV+S+ + + E + G PY+ K
Sbjct: 177 LKWYAPECINFRKF-----SSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-KLLWVAP 59
M YL S+ +H L + NCL+ + V+KISDFG++ + W AP
Sbjct: 226 MEYL-ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L + + DV+SF I+L E G PY
Sbjct: 285 EALNY-----GRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 1 MTYLHSSELG-VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----L 54
M YL S++G VH L + N LI+ V K+SDFGL + E ++ Y + +
Sbjct: 160 MKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL---EDDPEAAYTTRGGKIPI 214
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY-EVAKQ 100
W +PE I T DV+S+ I+L E++ G PY E++ Q
Sbjct: 215 RWTSPE-----AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 18/96 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YLH+ +H L + N L+D +VKI DFGL + + YY +
Sbjct: 124 MAYLHAQHY-IHRALAARNVLLDNDRLVKIGDFGL-----AKAVPEGHEYYRVREDGDSP 177
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
+ W APE L DV+SF + L E++
Sbjct: 178 VFWYAPECLKECKF-----YYASDVWSFGVTLYELL 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + +++ +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A++ D+++ I+ ++V P+ ++L
Sbjct: 204 ELL-----TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 11 VHGKLRSSNCLI-----DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVT 65
VH LRS N + + K++DFG T+ + S W+APE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHSVSGLLGNFQWMAPETIGAE 201
Query: 66 VIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
T+K D YSF++IL I+ GP++
Sbjct: 202 ---EESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK--LLWVA 58
M YL S VH L + N L+ + KISDFGL+ E + + K + W A
Sbjct: 124 MKYLEESNF-VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
PE + + K DV+SF +++ E G PY K
Sbjct: 183 PECINYYKF-----SSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYN-KLLWVAP 59
M YL S+ +H L + NCL+ + V+KISDFG++ + W AP
Sbjct: 226 MEYL-ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L + + DV+SF I+L E G PY
Sbjct: 285 EALNY-----GRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL + +H L + NC++ V ++DFGL S+ +YY +
Sbjct: 160 MEYLSNRNF-LHRDLAARNCMLRDDMTVCVADFGL------SKKIYSGDYYRQGRIAKMP 212
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
+ W+A E L V T K DV++F + + EI RG PY
Sbjct: 213 VKWIAIESLADRVY-----TSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH ++ N LID +KI DFG+ + + +T+ ++ + + +PE G
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA-----KGE 187
Query: 71 PATQKGDVYSFSIILEEIVVRGGPY 95
+ D+YS I+L E++V P+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H ++ VH L+ N L+D VKI+DFGL+ + T K S NY A
Sbjct: 128 YCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY------AA 180
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G DV+S +IL ++ R P++
Sbjct: 181 PEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H ++ VH L+ N L+D VKI+DFGL+ + T K S NY A
Sbjct: 127 YCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY------AA 179
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G DV+S +IL ++ R P++
Sbjct: 180 PEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 11 VHGKLRSSNCLI-----DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVT 65
VH LRS N + + K++DFGL + + S W+APE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMAPETIGAE 201
Query: 66 VIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
T+K D YSF++IL I+ GP++
Sbjct: 202 ---EESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H ++ VH L+ N L+D VKI+DFGL+ + T K S NY A
Sbjct: 118 YCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY------AA 170
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G DV+S +IL ++ R P++
Sbjct: 171 PEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H ++ VH L+ N L+D VKI+DFGL+ + T K S NY A
Sbjct: 122 YCHRHKI-VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNY------AA 174
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G DV+S +IL ++ R P++
Sbjct: 175 PEVISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL +L VH L + N L+ +KISDFGL+ ++ ++ +Y + +
Sbjct: 163 MQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLS-----RDVYEEDSYVKRSQGRIPV 216
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
W+A E L + T + DV+SF ++L EIV GG PY
Sbjct: 217 KWMAIESLFDHIY-----TTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YLH+ +H L + N L+D +VKI DFGL + + YY +
Sbjct: 130 MAYLHAQHY-IHRNLAARNVLLDNDRLVKIGDFGL-----AKAVPEGHEYYRVREDGDSP 183
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
+ W APE L DV+SF + L E++
Sbjct: 184 VFWYAPECLKEYKF-----YYASDVWSFGVTLYELLT 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + +++ +V+P
Sbjct: 146 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 205 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+++LH++ + VH L+ N L+D +++SDFG + P E K ++APE
Sbjct: 213 VSFLHANNI-VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPE 269
Query: 61 LLPVTVIPGSPATQKG-DVYSFSIILEEIVVRGGPYEVAKQFL 102
+L ++ P K D+++ +IL ++ P+ +Q L
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN-ILTTPSEITKDS---NYYNKLLW 56
+ YLH + +H +++ N L+ V+I+DFG++ L T +IT++ + W
Sbjct: 129 LEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE++ + G K D++SF I E+ PY
Sbjct: 188 MAPEVM--EQVRGYDF--KADIWSFGITAIELATGAAPY 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 39.7 bits (91), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL VH L + N L+ R KISDFGL+ + D +YY
Sbjct: 449 MKYLEEKNF-VHRNLAARNVLLVNRHYAKISDFGLS-----KALGADDSYYTARSAGKWP 502
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPYEVAK 99
L W APE I + + DV+S+ + + E + G PY+ K
Sbjct: 503 LKWYAPE-----CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL------LWVAPELLPV 64
VH L + N L++ V K+SDFGL+ E + D Y + L W APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFL--EENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 65 TVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
T D +S+ I++ E++ G PY
Sbjct: 196 RKF-----TSASDAWSYGIVMWEVMSFGERPY 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLN--ILTTPSEITKDSNYYNK--LLWVAPELLPVTV 66
VH L + N L++ V K+SDFGL+ + S+ T+ S+ K + W APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 67 IPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
T D +S+ I++ E++ G PY
Sbjct: 200 F-----TSASDAWSYGIVMWEVMSFGERPY 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN-ILTTPSEITKDS---NYYNKLLW 56
+ YLH + +H +++ N L+ V+I+DFG++ L T +IT++ + W
Sbjct: 134 LEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+APE++ + G K D++SF I E+ PY
Sbjct: 193 MAPEVM--EQVRGYDF--KADIWSFGITAIELATGAAPY 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + +++ +V+P
Sbjct: 142 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 201 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNI-LTTPSEITKDSNYYNKLLWVAP 59
M YL +L VH L + N L+ +KISDFGL+ + K S + W+A
Sbjct: 163 MQYLAEMKL-VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAI 221
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L + T + DV+SF ++L EIV GG PY
Sbjct: 222 ESLFDHIY-----TTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 204 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----LL 55
M YL S VH L + N L++ V K+SDFG++ + E ++ Y + +
Sbjct: 144 MKYL-SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIR 199
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W APE I T DV+S+ I++ E++ G PY
Sbjct: 200 WTAPE-----AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 204 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 12 HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGSP 71
H ++ N L+ + DFG+ TT ++T+ N L + APE S
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSE-----SH 211
Query: 72 ATQKGDVYSFSIILEEIVVRGGPYE 96
AT + D+Y+ + +L E + PY+
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 150 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 209 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 146 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 205 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 148 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 207 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 204 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 143 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 202 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 143 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 202 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 143 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 202 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 143 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 202 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 122 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 181 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 123 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 182 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.5 bits (88), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 127 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 186 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 120 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 179 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 121 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 180 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 142 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ ++L
Sbjct: 201 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNI-LTTPSEITKDSNYYNKLLWVAP 59
M YL L VH L + N L+ +KISDFGL+ + K S + W+A
Sbjct: 163 MQYLAEMSL-VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAI 221
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PY 95
E L + T + DV+SF ++L EIV GG PY
Sbjct: 222 ESLFDHIY-----TTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H + VH L+ N L+D KI+DFGL+ + + E +DS NY A
Sbjct: 126 YCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNY------AA 178
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G D++S +IL ++ P++
Sbjct: 179 PEVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH L+ N L+D +K++DFG + P E K + ++APE++ ++
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 71 PATQKG-DVYSFSIILEEIVVRGGPYEVAKQFL 102
P K D++S +I+ ++ P+ KQ L
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 116 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 170
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 171 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH L+ N L+D +K++DFG + P E K ++APE++ ++
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNH 203
Query: 71 PATQKG-DVYSFSIILEEIVVRGGPYEVAKQFL 102
P K D++S +I+ ++ P+ KQ L
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++YLH+ + +H ++S + L+ DGR +K+SDFG + E+ K W+A
Sbjct: 154 LSYLHNQGV-IHRDIKSDSILLTSDGR--IKLSDFGFCAQVS-KEVPKRKXLVGTPYWMA 209
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PE VI P + D++S I++ E++ PY
Sbjct: 210 PE-----VISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 19/101 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLL--- 55
+ YLH+ + +H ++S + L+ DGR VK+SDFG ++I+KD L+
Sbjct: 154 LAYLHAQGV-IHRDIKSDSILLTLDGR--VKLSDFGFC-----AQISKDVPKRKXLVGTP 205
Query: 56 -WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
W+APE VI S + D++S I++ E+V PY
Sbjct: 206 YWMAPE-----VISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
VH L+ N L+D +K++DFG + P E K ++APE++ ++
Sbjct: 133 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNH 190
Query: 71 PATQKG-DVYSFSIILEEIVVRGGPYEVAKQFL 102
P K D++S +I+ ++ P+ KQ L
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLW 56
+ Y H ++ VH L+ N L+D VKI+DFGL+ + T K S NY
Sbjct: 121 IEYCHRHKI-VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNY------ 173
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
APE++ + G DV+S I+L ++V P++
Sbjct: 174 AAPEVINGKLYAGPEV----DVWSCGIVLYVMLVGRLPFD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMXGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMXGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMXGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + +H +++ N L+ +VK+ DFG + P+ + Y W+APE
Sbjct: 167 LAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPE 220
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ + + K DV+S I E+ R P
Sbjct: 221 V--ILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMXGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----LL 55
M YL VH L + N L++ V K+SDFG++ + E ++ Y + +
Sbjct: 129 MKYLSDMSY-VHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIR 184
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W APE I T DV+S+ I++ E++ G PY
Sbjct: 185 WTAPE-----AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK-----LL 55
M YL VH L + N L++ V K+SDFG++ + E ++ Y + +
Sbjct: 123 MKYLSDMSY-VHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIR 178
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W APE I T DV+S+ I++ E++ G PY
Sbjct: 179 WTAPE-----AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY-------NK 53
M YL + +H L + N L++ VKI DFGL + + +D YY +
Sbjct: 128 MEYLGTKRY-IHRNLATRNILVENENRVKIGDFGLTKV-----LPQDKEYYKVKEPGESP 181
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEI 88
+ W APE L S + DV+SF ++L E+
Sbjct: 182 IFWYAPESL-----TESKFSVASDVWSFGVVLYEL 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMXGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 118 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 172
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 173 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---- 55
+ YLH +G+ H ++ N L+D R +KISDFG L T NK+
Sbjct: 117 VVYLHG--IGITHRDIKPENLLLDERDNLKISDFG---LATVFRYNNRERLLNKMCGTLP 171
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+VAPELL P DV+S I+L ++ P++
Sbjct: 172 YVAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWD 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + +H +++ N L+ +VK+ DFG + P+ + Y W+APE
Sbjct: 128 LAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPE 181
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
+ + + K DV+S I E+ R P
Sbjct: 182 V--ILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG + E+ + W+A
Sbjct: 138 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGFCAQVS-KEVPRRKXLVGTPYWMA 193
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 194 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 11 VHGKLRSSNCLI-----DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVT 65
VH LRS N + + K++DF L + + S W+APE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQQSVHSVSGLLGNFQWMAPETIGAE 201
Query: 66 VIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
T+K D YSF++IL I+ GP++
Sbjct: 202 ---EESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG + E+ + W+A
Sbjct: 140 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGFCAQVS-KEVPRRKXLVGTPYWMA 195
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 196 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG E+ + W+A
Sbjct: 183 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMA 238
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 239 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 270
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG + E+ + W+A
Sbjct: 129 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGFCAQVS-KEVPRRKXLVGTPYWMA 184
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 185 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL L VH L + N L+ VKI+DFGL L + D YN +
Sbjct: 130 MMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARL-----LEGDEKEYNADGGKMPI 183
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
W+A E I T + DV+S+ + + E++ GG PY+
Sbjct: 184 KWMALE-----CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG + E+ + W+A
Sbjct: 133 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGFCAQVS-KEVPRRKXLVGTPYWMA 188
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 189 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS ++ ++ L+ N L+D +KI+DFG ++ D Y L P+
Sbjct: 119 LEYLHSKDI-IYRDLKPENILLDKNGHIKITDFGF------AKYVPDVTY---XLCGTPD 168
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+ V+ P + D +SF I++ E++ P+
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLI--DGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
++ LH+ + +H ++S + L+ DGR VK+SDFG E+ + W+A
Sbjct: 260 LSVLHAQGV-IHRDIKSDSILLTHDGR--VKLSDFGF-CAQVSKEVPRRKXLVGTPYWMA 315
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PEL ++ +P P D++S I++ E+V PY
Sbjct: 316 PEL--ISRLPYGPEV---DIWSLGIMVIEMVDGEPPY 347
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPS----EITKDSNYYNKLLW 56
M YLH+ +H L + N L+D +VKI DFGL + +D + + + W
Sbjct: 147 MAYLHAQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD--SPVFW 203
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
APE L DV+SF + L E++
Sbjct: 204 YAPECLKEYKF-----YYASDVWSFGVTLYELL 231
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
+ +LHS LG+ + L+ N L+D +K++DFGL+ + E K ++ + ++AP
Sbjct: 140 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAP 196
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
E V+ TQ D +SF +++ E++ P++
Sbjct: 197 E-----VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL L VH L + N L+ VKI+DFGL L + D YN +
Sbjct: 153 MMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARL-----LEGDEKEYNADGGKMPI 206
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
W+A E I T + DV+S+ + + E++ GG PY+
Sbjct: 207 KWMALE-----CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
+ +LHS LG+ + L+ N L+D +K++DFGL+ + E K ++ + ++AP
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAP 195
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
E V+ TQ D +SF +++ E++ P++
Sbjct: 196 E-----VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ + L
Sbjct: 204 ELL-----TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG-LNILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + +H L+ N L++ ++I+DFG +L+ S+ + + + +V+P
Sbjct: 145 LEYLHGKGI-IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFL 102
ELL A + D+++ I+ ++V P+ + L
Sbjct: 204 ELL-----TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------- 53
M YL S +H L + NC++ V ++DFGL S +YY +
Sbjct: 150 MEYLSSRNF-IHRDLAARNCMLAEDMTVCVADFGL------SRKIYSGDYYRQGCASKLP 202
Query: 54 LLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
+ W+A E L + T DV++F + + EI+ RG PY
Sbjct: 203 VKWLALESLADNLY-----TVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+DG +KI+DFG N T +++ + + AP
Sbjct: 127 VQYCHQKYI-VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL---DTFCGSPPYAAP 182
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 183 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
YL +H ++ SN L+D R +K+ DFG+ S D ++ A +
Sbjct: 139 YLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI------SGRLVDDKAKDRSAGCAAYMA 192
Query: 63 PVTVIPGSPATQ----KGDVYSFSIILEEIVVRGGPYEVAK 99
P + P P + DV+S I L E+ PY+ K
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 1 MTYLHS--SELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
+ YLH +H ++++N L+D F + DFGL L + + +A
Sbjct: 144 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIA 203
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAK 99
PE L +++K DV+ + ++L E++ +++A+
Sbjct: 204 PEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 1 MTYLHS--SELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVA 58
+ YLH +H ++++N L+D F + DFGL L + + +A
Sbjct: 152 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIA 211
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAK 99
PE L +++K DV+ + ++L E++ +++A+
Sbjct: 212 PEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
+ +LHS LG+ + L+ N L+D +K++DFGL+ + E K ++ + ++AP
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAP 195
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
E V+ TQ D +SF +++ E++ P++
Sbjct: 196 E-----VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWVA 58
M YL S +H L + N L+ R +VKI DFGL ++ + K+ W A
Sbjct: 134 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
PE L + D + F + L E+ G
Sbjct: 193 PESLKTRTF-----SHASDTWMFGVTLWEMFTYG 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---NILTTPSEITKDSNYYNKLLWV 57
+ +LHS + V+ L+ N L+D +KI+DFG+ N+L K + + ++
Sbjct: 132 LQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNEFCGTPDYI 186
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+L G D +SF ++L E+++ P+
Sbjct: 187 APEIL-----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLWVA 58
Y H + VH L+ N L+D KI+DFGL+ + + E + S NY A
Sbjct: 126 YCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNY------AA 178
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
PE++ + G D++S +IL ++ P++
Sbjct: 179 PEVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWVA 58
+ Y+H +++ +H ++++N LI V+K++DFGL + ++ ++ + Y N++ LW
Sbjct: 138 LYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 59 -PELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
PELL G P D++ I+ E+ R
Sbjct: 197 PPELLLGERDYGPPI----DLWGAGCIMAEMWTR 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWVA 58
M YL S +H L + N L+ R +VKI DFGL ++ + K+ W A
Sbjct: 124 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
PE L + D + F + L E+ G
Sbjct: 183 PESLKTRTF-----SHASDTWMFGVTLWEMFTYG 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S +H L + N L+ R +VKI DFGL + P D +Y +
Sbjct: 134 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGL-MRALPQ---NDDHYVMQEHRKVPF 188
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W APE L + D + F + L E+ G
Sbjct: 189 AWCAPESLKTRTF-----SHASDTWMFGVTLWEMFTYG 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S +H L + N L+ R +VKI DFGL + P D +Y +
Sbjct: 128 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGL-MRALPQ---NDDHYVMQEHRKVPF 182
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W APE L + D + F + L E+ G
Sbjct: 183 AWCAPESLKTRTF-----SHASDTWMFGVTLWEMFTYG 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 130 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 189 PESL-----TESKFSVASDVWSFGVVLYEL 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S +H L + N L+ R +VKI DFGL + P D +Y +
Sbjct: 124 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGL-MRALPQ---NDDHYVMQEHRKVPF 178
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W APE L + D + F + L E+ G
Sbjct: 179 AWCAPESLKTRTF-----SHASDTWMFGVTLWEMFTYG 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 132 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 191 PESL-----TESKFSVASDVWSFGVVLYEL 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 130 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 189 PESL-----TESKFSVASDVWSFGVVLYEL 213
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 131 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 190 PESL-----TESKFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 125 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 184 PESL-----TESKFSVASDVWSFGVVLYEL 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 158 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 217 PESL-----TESKFSVASDVWSFGVVLYEL 241
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---NILTTPSEITKDSNYYNKLLWV 57
+ +LHS + V+ L+ N L+D +KI+DFG+ N+L K + + ++
Sbjct: 131 LQFLHSKGI-VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNXFCGTPDYI 185
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
APE+L G D +SF ++L E+++ P+
Sbjct: 186 APEIL-----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 133 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 192 PESL-----TESKFSVASDVWSFGVVLYEL 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 130 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 189 PESL-----TESKFSVASDVWSFGVVLYEL 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S +H L + N L+ R +VKI DFGL + P D +Y +
Sbjct: 124 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGL-MRALPQ---NDDHYVMQEHRKVPF 178
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W APE L + D + F + L E+ G
Sbjct: 179 AWCAPESLKTRTF-----SHASDTWMFGVTLWEMFTYG 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 127 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 186 PESL-----TESKFSVASDVWSFGVVLYEL 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 127 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 186 PESL-----TESKFSVASDVWSFGVVLYEL 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 126 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 185 PESL-----TESKFSVASDVWSFGVVLYEL 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.0 bits (79), Expect = 0.009, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LH + ++ L+ N L+D V+ISD GL + + TK Y ++APE
Sbjct: 302 LEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPE 359
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
LL G D ++ + L E++ GP+
Sbjct: 360 LL-----LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 134 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 193 PESL-----TESKFSVASDVWSFGVVLYEL 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.0 bits (79), Expect = 0.009, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LH + ++ L+ N L+D V+ISD GL + + TK Y ++APE
Sbjct: 302 LEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPE 359
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
LL G D ++ + L E++ GP+
Sbjct: 360 LL-----LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 145 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 204 PESL-----TESKFSVASDVWSFGVVLYEL 228
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.0 bits (79), Expect = 0.009, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LH + ++ L+ N L+D V+ISD GL + + TK Y ++APE
Sbjct: 302 LEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPE 359
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
LL G D ++ + L E++ GP+
Sbjct: 360 LL-----LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.0 bits (79), Expect = 0.009, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LH + ++ L+ N L+D V+ISD GL + + TK Y ++APE
Sbjct: 302 LEHLHQRNI-IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPE 359
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
LL G D ++ + L E++ GP+
Sbjct: 360 LL-----LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 145 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 204 PESL-----TESKFSVASDVWSFGVVLYEL 228
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITK-DSNYYNKLLWVA 58
M YL + +H L + N L++ VKI DFGL +L E K + + W A
Sbjct: 127 MEYLGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PE L S + DV+SF ++L E+
Sbjct: 186 PESL-----TESKFSVASDVWSFGVVLYEL 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSN-YYNKLLWVAPELLPVTVIPG 69
H +S N L+ ++DFGL + P + D++ ++APE+L +
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQ 204
Query: 70 SPATQKGDVYSFSIILEEIVVR 91
A + D+Y+ ++L E+V R
Sbjct: 205 RDAFLRIDMYAMGLVLWELVSR 226
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDS----NYYNKLLW 56
+ Y H + VH L+ N L+D KI+DFGL+ + + E + S NY
Sbjct: 129 VDYCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNY------ 181
Query: 57 VAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
APE++ + G D++S +IL ++ P++
Sbjct: 182 AAPEVISGRLYAGPEV----DIWSSGVILYALLCGTLPFD 217
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL------------NILTTPSEITKD- 47
+ YLHS L +H ++ SN L++ VK++DFGL NI + +E T++
Sbjct: 122 IKYLHSGGL-LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 48 -------SNYYNKLLWVAPELLPVTVIPGSPATQKG-DVYSFSIILEEIVVRGGP 94
++Y + APE+L GS KG D++S IL EI+ G P
Sbjct: 181 DDDQPILTDYVATRWYRAPEIL-----LGSTKYTKGIDMWSLGCILGEILC-GKP 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ Y+HS +L +H L+ SN + VKI DFGL +T+ K + L +++PE
Sbjct: 149 VDYIHSKKL-IHRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRTRSKGTLRYMSPE 205
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIV-VRGGPYEVAKQF 101
I ++ D+Y+ +IL E++ V +E +K F
Sbjct: 206 -----QISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF 242
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 1 MTYLHSSE-LGVHGKLRSSNCLIDGRFVVKISDFGLNI-LTTPSEITKDSNYYNKLLWVA 58
M +LH+ E L L S + +ID +IS + +P + + WVA
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA-------WVA 176
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PE L P + D++SF+++L E+V R P+
Sbjct: 177 PEAL--QKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T ++ + + AP
Sbjct: 124 VQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DTFCGSPPYAAP 179
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 180 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 212
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+++LH ++ +H ++ N L+ VK+ DFG++ + + + + W+APE
Sbjct: 142 LSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSA-QLDRTVGRRNTFIGTPYWMAPE 199
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
++ P + K D++S I E+ G P
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEM-AEGAP 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-----------NILTTPSEITKDSNYY 51
+LHS L +H L+ SN VVK+ DFGL +LT + +
Sbjct: 133 FLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 52 NKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
L+++PE I G+ + K D++S +IL E++
Sbjct: 192 GTKLYMSPE-----QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS +H ++ SN LI+ VK+ DFG++ ++ KD + K P
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCK-----PY 175
Query: 61 LLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYE 96
+ P + P QKG D++S I + E+ + PY+
Sbjct: 176 MAPERINP--ELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T ++ + + AP
Sbjct: 127 VQYCHQKRI-VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGAPPYAAP 182
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 183 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M+YL L VH L + N L+ VKI+DFGL L E + Y+ V +
Sbjct: 132 MSYLEDVRL-VHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWV- 57
+ Y+H +++ +H ++++N LI V+K++DFGL + ++ ++ + Y N++ LW
Sbjct: 137 LYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
PELL G P D++ I+ E+ R
Sbjct: 196 PPELLLGERDYGPPI----DLWGAGCIMAEMWTR 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWV- 57
+ Y+H +++ +H ++++N LI V+K++DFGL + ++ ++ + Y N++ LW
Sbjct: 138 LYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
PELL G P D++ I+ E+ R
Sbjct: 197 PPELLLGERDYGPPI----DLWGAGCIMAEMWTR 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL--LWV- 57
+ Y+H +++ +H ++++N LI V+K++DFGL + ++ ++ + Y N++ LW
Sbjct: 138 LYYIHRNKI-LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
PELL G P D++ I+ E+ R
Sbjct: 197 PPELLLGERDYGPPI----DLWGAGCIMAEMWTR 226
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY----NKLL- 55
M YL S + VH L + N L+ + VKISD GL E+ ++YY N LL
Sbjct: 158 MEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLF-----REVYA-ADYYKLLGNSLLP 210
Query: 56 --WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W+APE I + D++S+ ++L E+ G PY
Sbjct: 211 IRWMAPE-----AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAPELLPVTVIPG 69
+H L+ +N +DG+ VK+ DFGL IL + K+ + +++PE +
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPEQMNRM---- 191
Query: 70 SPATQKGDVYSFSIILEEIVVRGGPYEVAKQ 100
+K D++S +L E+ P+ Q
Sbjct: 192 -SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 140 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 194
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 124 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 178
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYY----NKLL- 55
M YL S + VH L + N L+ + VKISD GL E+ ++YY N LL
Sbjct: 141 MEYLSSHHV-VHKDLATRNVLVYDKLNVKISDLGLF-----REVYA-ADYYKLLGNSLLP 193
Query: 56 --WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG-GPY 95
W+APE I + D++S+ ++L E+ G PY
Sbjct: 194 IRWMAPE-----AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 127 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 181
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 155 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 209
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 133 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 131 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 185
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 137 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 132 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 133 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S VH + N L+ VK+ DFGL S +D +YY +
Sbjct: 122 MAYLESINC-VHRDIAVRNILVASPECVKLGDFGL------SRYIEDEDYYKASVTRLPI 174
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W++PE I T DV+ F++ + EI+ G
Sbjct: 175 KWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFG 207
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 137 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.9 bits (76), Expect = 0.027, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S +H L + N L+ R +VKI DFGL + P D +Y +
Sbjct: 128 MGYLESKRF-IHRDLAARNLLLATRDLVKIGDFGL-MRALPQ---NDDHYVMQEHRKVPF 182
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W APE L + D + F + L E+ G
Sbjct: 183 AWCAPESLKTRTF-----SHASDTWMFGVTLWEMFTYG 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 136 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 190
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 133 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 131 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 185
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 134 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 188
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 132 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 133 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 187
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 137 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S VH + N L+ VK+ DFGL S +D +YY +
Sbjct: 138 MAYLESINC-VHRDIAVRNILVASPECVKLGDFGL------SRYIEDEDYYKASVTRLPI 190
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W++PE I T DV+ F++ + EI+ G
Sbjct: 191 KWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFG 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.5 bits (75), Expect = 0.028, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 12 HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL-------WVAPELL-- 62
H L S N L+ ISDFGL++ T + + + N + ++APE+L
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202
Query: 63 PVTVIPGSPATQKGDVYSFSIILEEIVVR 91
V + A ++ D+Y+ +I EI +R
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNK------L 54
M YL S VH + N L+ VK+ DFGL S +D +YY +
Sbjct: 126 MAYLESINC-VHRDIAVRNILVASPECVKLGDFGL------SRYIEDEDYYKASVTRLPI 178
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRG 92
W++PE I T DV+ F++ + EI+ G
Sbjct: 179 KWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFG 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFGL L E Y+ + V +
Sbjct: 164 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE----KEYHAEGGKVPIK 218
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 2 TYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKL 54
++H S + +H L+ +NCL++ VK+ DFGL T SE KD+N N L
Sbjct: 143 NFIHESGI-IHRDLKPANCLLNQDCSVKVCDFGL-ARTINSE--KDTNIVNDL 191
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-----------NILT-TPSEITKDSNY 50
+LHS L +H L+ SN VVK+ DFGL +LT P+ T
Sbjct: 179 FLHSKGL-MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 51 YNKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
K L+++PE I G+ + K D++S +IL E++
Sbjct: 238 GTK-LYMSPEQ-----IHGNNYSHKVDIFSLGLILFELL 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T +++ + + AP
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAP 181
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 182 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----W 56
+ YLH++ + +H L+ N ++ VKI DFGL ++I D L +
Sbjct: 155 VQYLHNNRV-IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNY 208
Query: 57 VAPELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
+APE+L +KG D++S IL ++V P+E +
Sbjct: 209 IAPEVL----------CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T +++ + + AP
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSPPYAAP 181
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 182 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----W 56
+ YLH++ + +H L+ N ++ VKI DFGL ++I D L +
Sbjct: 139 VQYLHNNRV-IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNY 192
Query: 57 VAPELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
+APE+L +KG D++S IL ++V P+E +
Sbjct: 193 IAPEVL----------CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----W 56
+ YLH++ + +H L+ N ++ VKI DFGL ++I D L +
Sbjct: 155 VQYLHNNRV-IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNY 208
Query: 57 VAPELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
+APE+L +KG D++S IL ++V P+E +
Sbjct: 209 IAPEVL----------CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H L+ +N +DG+ VK+ DFGL + I + K P + +
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGL------ARILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 71 PATQKGDVYSFSIILEEIVVRGGPYEVAKQ 100
+K D++S +L E+ P+ Q
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T +++ + + AP
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSPPYAAP 181
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 182 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N +I VK+ DFG+ I + + +T+ + +++PE
Sbjct: 155 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----AR 209
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N +I VK+ DFG+ I + + +T+ + +++PE
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----AR 192
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N +I VK+ DFG+ I + + +T+ + +++PE
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----AR 192
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T +++ + + AP
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSPPYAAP 181
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 182 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + VH L++ N L+D +KI+DFG N T +++ + + AP
Sbjct: 119 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DTFCGSPPYAAP 174
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
EL G DV+S +IL +V P++
Sbjct: 175 ELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
+H L+ +N +DG+ VK+ DFGL + I + K P + +
Sbjct: 138 LHRDLKPANVFLDGKQNVKLGDFGL------ARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 71 PATQKGDVYSFSIILEEIVVRGGPYEVAKQ 100
+K D++S +L E+ P+ Q
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N +I VK+ DFG+ I + + +T+ + +++PE
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----AR 192
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----- 55
+ Y H + VH L++ N L+D +KI+DFG + +E T + NKL
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADMNIKIADFGFS-----NEFT----FGNKLDAFCGA 175
Query: 56 --WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+ APEL G DV+S +IL +V P++
Sbjct: 176 PPYAAPELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----W 56
+ YLH++ + +H L+ N ++ VKI DFGL ++I D L +
Sbjct: 155 VQYLHNNRV-IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKTLCGTPNY 208
Query: 57 VAPELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
+APE+L +KG D++S IL ++V P+E +
Sbjct: 209 IAPEVL----------CKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N +I VK+ DFG+ I + + +T+ + +++PE
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----AR 192
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN---ILTTPSEITKDSNYYNKLLWV 57
+ +LHS +H ++ SN LI+ VK+ DFG++ + + I Y +
Sbjct: 166 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERI 225
Query: 58 APELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYE 96
PEL QKG D++S I + E+ + PY+
Sbjct: 226 NPEL-----------NQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----- 55
+ Y H + VH L++ N L+D +KI+DFG + +E T + NKL
Sbjct: 126 VQYCHQKFI-VHRDLKAENLLLDADXNIKIADFGFS-----NEFT----FGNKLDAFCGA 175
Query: 56 --WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+ APEL G DV+S +IL +V P++
Sbjct: 176 PPYAAPELFQGKKYDGPEV----DVWSLGVILYTLVSGSLPFD 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.0 bits (71), Expect = 0.080, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ Y+HS+ + +H L+ +NCL++ VK+ DFGL
Sbjct: 169 VKYVHSAGI-LHRDLKPANCLVNQDCSVKVCDFGL 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.0 bits (71), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKD---SNYYNKLLWVAPELLPVTV 66
+H ++ N LI V+K+ DFG +LT PS+ D + +Y +PELL
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR-----SPELLVGDT 178
Query: 67 IPGSPATQKGDVYSFSIILEEIV 89
G P DV++ + E++
Sbjct: 179 QYGPPV----DVWAIGCVFAELL 197
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.0 bits (71), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----WVA 58
YLH + + +H L+ N ++ VKI DFGL +++ D L ++A
Sbjct: 136 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTPNYIA 189
Query: 59 PELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
PE+L ++KG DV+S I+ ++V P+E +
Sbjct: 190 PEVL----------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----WVA 58
YLH + + +H L+ N ++ VKI DFGL +++ D L ++A
Sbjct: 132 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTPNYIA 185
Query: 59 PELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
PE+L ++KG DV+S I+ ++V P+E +
Sbjct: 186 PEVL----------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL----WVA 58
YLH + + +H L+ N ++ VKI DFGL +++ D L ++A
Sbjct: 132 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTPNYIA 185
Query: 59 PELLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYEVA 98
PE+L ++KG DV+S I+ ++V P+E +
Sbjct: 186 PEVL----------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
YLH + + +H L+ N ++ VKI DFGL +++ D K+L P +
Sbjct: 130 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE-RKKVLCGTPNYI 182
Query: 63 PVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVA 98
V+ + + DV+S I+ ++V P+E +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYY------- 51
++Y+HS + +H L+ N ID VKI DFGL N+ + + DS
Sbjct: 129 LSYIHSQGI-IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 52 ----NKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
++VA E+L T +K D+YS II E++
Sbjct: 188 TSAIGTAMYVATEVLDGT----GHYNEKIDMYSLGIIFFEMI 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
YLH + + +H L+ N ++ VKI DFGL +++ D K+L P +
Sbjct: 154 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE-RKKVLCGTPNYI 206
Query: 63 PVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVA 98
V+ + + DV+S I+ ++V P+E +
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYY------- 51
++Y+HS + +H L+ N ID VKI DFGL N+ + + DS
Sbjct: 129 LSYIHSQGI-IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 52 ----NKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
++VA E+L T +K D+YS II E++
Sbjct: 188 TSAIGTAMYVATEVLDGT----GHYNEKIDMYSLGIIFFEMI 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
YLH + + +H L+ N ++ VKI DFGL +++ D K+L P +
Sbjct: 156 YLHRNRV-IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGE-RKKVLCGTPNYI 208
Query: 63 PVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVA 98
V+ + + DV+S I+ ++V P+E +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLL---WV 57
+ YLH + +H L+ +N L+D V+K++DFGL S + + Y ++++ +
Sbjct: 125 LEYLHQHWI-LHRDLKPNNLLLDENGVLKLADFGL----AKSFGSPNRAYXHQVVTRWYR 179
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
APELL + G D+++ IL E+++R
Sbjct: 180 APELLFGARMYGVGV----DMWAVGCILAELLLR 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 132 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 132 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 132 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 186
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 137 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 134 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 188
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPE 192
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 193 RL-----QGTHYSVQSDIWSMGLSLVEMAV 217
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YL L VH L + N L+ VKI+DFG L E Y+ + V +
Sbjct: 130 MNYLEDRRL-VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE----KEYHAEGGKVPIK 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGG-PYE 96
+ + I T + DV+S+ + + E++ G PY+
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
++ L+ N ++D +KI+DFG+ +T K P+ + +I
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKXFCGTPDYIAPEIIAYQ 196
Query: 71 PATQKGDVYSFSIILEEIVVRGGPYE 96
P + D ++F ++L E++ P+E
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YL +H ++ SN L++ R +K+ DFG++ S +++ ++APE
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPE 183
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 184 RL-----QGTHYSVQSDIWSMGLSLVELAV 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPE 200
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 201 RL-----QGTHYSVQSDIWSMGLSLVEMAV 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLPVTVIPGS 70
++ L+ N ++D +KI+DFG+ +T K P+ + +I
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT------TKXFCGTPDYIAPEIIAYQ 517
Query: 71 PATQKGDVYSFSIILEEIVVRGGPYE 96
P + D ++F ++L E++ P+E
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.2 bits (69), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPE 173
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 174 RL-----QGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPE 173
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 174 RL-----QGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKD---SNYYNKLLWVA 58
+ HS + +H ++ N L+ VVK+ DFG L P E+ D + +Y A
Sbjct: 139 FCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR-----A 192
Query: 59 PELLPVTVIPGSPATQKGDVYSFSIILEEI 88
PELL V G DV++ ++ E+
Sbjct: 193 PELLVGDVKYGKAV----DVWAIGCLVTEM 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPE 235
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 236 RL-----QGTHYSVQSDIWSMGLSLVEMAV 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 1 MTYLHSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAP 59
+ +LHS LG+ + L+ N L+D +K++DFGL+ E K ++ + ++AP
Sbjct: 143 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE-KKAYSFCGTVEYMAP 199
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
E V+ + D +S+ +++ E++ P++
Sbjct: 200 E-----VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPE 173
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 174 RL-----QGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPE 173
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 174 RL-----QGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 5 HSSELGV-HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLP 63
H +LG+ + ++ N L+D V ++DFGL+ E + ++ + ++AP++
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI-- 231
Query: 64 VTVIPGSPATQKG-DVYSFSIILEEIVVRGGPYEV 97
V G K D +S +++ E++ P+ V
Sbjct: 232 --VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGL--NILTTPSEITKDSNYYNKLLWVAPELLPVTVIP 68
+H ++ +N LI VK+ DFG+ I + + + + + +++PE
Sbjct: 138 IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ-----AR 192
Query: 69 GSPATQKGDVYSFSIILEEIVVRGGPY 95
G + DVYS +L E++ P+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+TYL +H ++ SN L++ R +K+ DFG++ S +++ +++PE
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPE 173
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
L G+ + + D++S + L E+ V
Sbjct: 174 RL-----QGTHYSVQSDIWSMGLSLVEMAV 198
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
M YLHS + +H L SN L+ +KI+DFG L T ++ + +Y L P
Sbjct: 125 MLYLHSHGI-LHRDLTLSNLLLTRNMNIKIADFG---LATQLKMPHEKHY---TLCGTPN 177
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
+ + S + DV+S + +++ P++
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN---ILTTPSEITKDSNYYNKLLWV 57
+TYL +H ++ SN L++ R +K+ DFG++ I +E +Y +
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSY------M 173
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVV 90
+PE L G+ + + D++S + L E+ V
Sbjct: 174 SPERL-----QGTHYSVQSDIWSMGLSLVEMAV 201
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFGL + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ Y+HS +L ++ L+ SN + VKI DFGL +T+ K L +++PE
Sbjct: 135 VDYIHSKKL-INRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGTLRYMSPE 191
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIV-VRGGPYEVAKQF 101
I ++ D+Y+ +IL E++ V +E +K F
Sbjct: 192 -----QISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LHS +H ++ SN LI+ VK DFG++ ++ KD + K + APE
Sbjct: 149 LEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV-DDVAKDIDAGCK-PYXAPE 206
Query: 61 LLPVTVIPGSPATQKG-----DVYSFSIILEEIVVRGGPYE 96
+ QKG D++S I E+ + PY+
Sbjct: 207 RI------NPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 1 MTYLHSSELGV---------HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSN-Y 50
+ YLH G+ H ++S N L+ I+DFGL + + D++
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ 193
Query: 51 YNKLLWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
++APE+L + A + D+Y+ ++L E+ R
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
++H S + +H L+ +NCL++ VKI DFGL
Sbjct: 146 FIHESGI-IHRDLKPANCLLNQDCSVKICDFGL 177
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 56 WVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
WVAPE L P + D +SF+++L E+V R P+
Sbjct: 174 WVAPEAL--QKKPEDTNRRSADXWSFAVLLWELVTREVPF 211
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
++Y+HS + +H L+ N ID VKI DFGL
Sbjct: 129 LSYIHSQGI-IHRNLKPXNIFIDESRNVKIGDFGL 162
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + +K++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + +K++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + +K++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N ++D +KI+DFGL E KD K PE
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATM-KTFCGTPE 317
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ + + D + +++ E++ P+
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + +K++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.4 bits (67), Expect = 0.26, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N ++D +KI+DFGL E KD K PE
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATM-KTFCGTPE 314
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ + + D + +++ E++ P+
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N ++D +KI+DFGL E KD K PE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATM-KXFCGTPE 175
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ + + D + +++ E++ P+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 11 VHGKLRSSNCLIDGRFVVKISDFGLN-ILTTPSEITKDSNYYNKLLWVAPELLPVTVIPG 69
+H ++ SN L+D +K+ DFG++ L T+D+ P + P + P
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG-------CRPYMAPERIDPS 200
Query: 70 SPATQKG-----DVYSFSIILEEIVVRGGPY 95
A+++G DV+S I L E+ PY
Sbjct: 201 --ASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N ++D +KI+DFGL E KD K PE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATM-KXFCGTPE 174
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ + + D + +++ E++ P+
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.4 bits (67), Expect = 0.27, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N ++D +KI+DFGL E KD K PE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC-----KEGIKDGATM-KXFCGTPE 176
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ + + D + +++ E++ P+
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFG 34
+Y+H+ + H ++ SN L+D VK+SDFG
Sbjct: 164 FSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + ++++DFGL + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.6 bits (65), Expect = 0.39, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + +K++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRF---VVKISDFGLNILTTPSEITKDSNYYNKLLWV 57
+ Y HS+ + VH L+ N L+ + VK++DFGL I SE + ++
Sbjct: 118 IAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 174
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+PE V+ P ++ D+++ +IL ++V P+
Sbjct: 175 SPE-----VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRF---VVKISDFGLNILTTPSEITKDSNYYNKLLWV 57
+ Y HS+ + VH L+ N L+ + VK++DFGL I SE + ++
Sbjct: 118 IAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 174
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+PE V+ P ++ D+++ +IL ++V P+
Sbjct: 175 SPE-----VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRF---VVKISDFGLNILTTPSEITKDSNYYNKLLWV 57
+ Y HS+ + VH L+ N L+ + VK++DFGL I SE + ++
Sbjct: 117 IAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 173
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+PE V+ P ++ D+++ +IL ++V P+
Sbjct: 174 SPE-----VLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.6 bits (65), Expect = 0.47, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.6 bits (65), Expect = 0.48, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 177 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKG 235
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYP 257
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.3 bits (64), Expect = 0.53, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 142 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKG 200
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYP 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 29.3 bits (64), Expect = 0.53, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 4 LHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLP 63
LH + V+ L+ N L+D ++ISD GL + + K + ++APE++
Sbjct: 302 LHRERI-VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVK 358
Query: 64 VTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFLSTE 105
SP D ++ +L E++ P++ K+ + E
Sbjct: 359 NERYTFSP-----DWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.3 bits (64), Expect = 0.53, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 4 LHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELLP 63
LH + V+ L+ N L+D ++ISD GL + + K + ++APE++
Sbjct: 302 LHRERI-VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVK 358
Query: 64 VTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQFLSTE 105
SP D ++ +L E++ P++ K+ + E
Sbjct: 359 NERYTFSP-----DWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYP 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRF---VVKISDFGLNILTTPSEITKDSNYYNKLLWV 57
+ Y HS+ + VH L+ N L+ + VK++DFGL I SE + ++
Sbjct: 141 IAYCHSNGI-VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 197
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
+PE V+ P ++ D+++ +IL ++V P+
Sbjct: 198 SPE-----VLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 0.58, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 0.58, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.59, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 177 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 235
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYP 257
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.62, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
YLHS +L ++ L+ N LID + ++++DFG
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 151 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 209
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYP 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 157 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
YLHS +L ++ L+ N LID + ++++DFG
Sbjct: 156 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGF 187
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 177 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 235
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYP 257
>pdb|2XA7|B Chain B, Ap2 Clathrin Adaptor Core In Active Complex With Cargo
Peptides
Length = 592
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 44 ITKDSNYYNKLL-WVAPELLPVTVIPGSPATQKGDVYSFSIILEE 87
+ KDS+YYN LL +AP L VT++ G P Q + + ++I+++
Sbjct: 270 LPKDSDYYNMLLKKLAPPL--VTLLSGEPEVQYVALRNINLIVQK 312
>pdb|2VGL|B Chain B, Ap2 Clathrin Adaptor Core
pdb|2JKR|B Chain B, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
Phosphos)qikrllse
pdb|2JKR|E Chain E, Ap2 Clathrin Adaptor Core With Dileucine Peptide Rm(
Phosphos)qikrllse
pdb|2JKT|B Chain B, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
Phosphos)eikrllse Q To E Mutant
pdb|2JKT|E Chain E, Ap2 Clathrin Adaptor Core With Cd4 Dileucine Peptide Rm(
Phosphos)eikrllse Q To E Mutant
Length = 591
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 44 ITKDSNYYNKLL-WVAPELLPVTVIPGSPATQKGDVYSFSIILEE 87
+ KDS+YYN LL +AP L VT++ G P Q + + ++I+++
Sbjct: 270 LPKDSDYYNMLLKKLAPPL--VTLLSGEPEVQYVALRNINLIVQK 312
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 28.9 bits (63), Expect = 0.66, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N LID + ++++DFG + TP + + S
Sbjct: 149 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 207
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYP 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
YLHS +L ++ L+ N LID + ++++DFG
Sbjct: 149 YLHSLDL-IYRDLKPENLLIDQQGYIQVTDFGF 180
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 28.9 bits (63), Expect = 0.74, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 12 HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
H +R N ++D R ++ DFG +I+TTP + + +N EL
Sbjct: 362 HDDVRPWNVMVDARQHARLIDFG-SIVTTPQDCSWPTNLVQSFFVFVNELF 411
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 28.9 bits (63), Expect = 0.74, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 12 HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
H +R N ++D R ++ DFG +I+TTP + + +N EL
Sbjct: 362 HDDVRPWNVMVDARQHARLIDFG-SIVTTPQDCSWPTNLVQSFFVFVNELF 411
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 28.9 bits (63), Expect = 0.74, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 12 HGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPELL 62
H +R N ++D R ++ DFG +I+TTP + + +N EL
Sbjct: 362 HDDVRPWNVMVDARQHARLIDFG-SIVTTPQDCSWPTNLVQSFFVFVNELF 411
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
YLHS +L ++ L+ N LID + ++++DFG
Sbjct: 143 YLHSLDL-IYRDLKPENLLIDEQGYIQVTDFGF 174
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 28.5 bits (62), Expect = 0.99, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---------NILTTPSEITKD---SNY 50
YLHS +L ++ L+ N +ID + ++++DFG + TP + + S
Sbjct: 156 YLHSLDL-IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKG 214
Query: 51 YNKLL-WVAPELLPVTVIPGSP 71
YNK + W A +L + G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYP 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ ++HS + +H ++ +N I VVK+ D GL + S+ T + +++PE
Sbjct: 149 LEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPE 206
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
I + K D++S +L E+ P+
Sbjct: 207 R-----IHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YL + + +H ++ N L+D V I+DF NI T+ + ++APE
Sbjct: 128 LDYLQNQRI-IHRDMKPDNILLDEHGHVHITDF--NIAAMLPRETQITTMAGTKPYMAPE 184
Query: 61 LLPVTVIPGSPATQKGDVYSFSI 83
+ +++KG YSF++
Sbjct: 185 MF---------SSRKGAGYSFAV 198
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 118 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 20/97 (20%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL------NILTTPSEITKDSNYYNKL 54
+ +LH++ + VH L+ N L+ VK++DFGL + TP +T L
Sbjct: 133 LDFLHANCI-VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVT--------L 183
Query: 55 LWVAPELLPVTVIPGSPATQKGDVYSFSIILEEIVVR 91
+ APE+L + +P D++S I E+ R
Sbjct: 184 WYRAPEVLLQSTY-ATPV----DMWSVGCIFAEMFRR 215
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 123 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 156
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 118 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ YLHS + V+ L+ N L+D + + ++DFGL + + N PE
Sbjct: 152 LGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGL------CKENIEHNSTTSTFCGTPE 204
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
L V+ P + D + +L E++ P+
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL---NIL--TTPSEITKDSNYYNKLLWV 57
+LH + ++ L+ N ++D +KI+DFG+ +++ T E +Y +
Sbjct: 135 FLHKRGI-IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDY------I 187
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYE 96
APE +I P + D +++ ++L E++ P++
Sbjct: 188 APE-----IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 118 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 121 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 154
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 118 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ YLHS ++ V+ ++ N ++D +KI+DFGL
Sbjct: 118 LEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGL 151
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + +H L+ N LI+ +KI+DFGL P + K ++ L + AP
Sbjct: 113 IAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEVVTLWYRAP 169
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGP 94
++L + + D++S I E+ V G P
Sbjct: 170 DVL----MGSKKYSTTIDIWSVGCIFAEM-VNGAP 199
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ +LH++ + VH L+ N L+ VK++DFGL
Sbjct: 125 LDFLHANCI-VHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ +LH++ + VH L+ N L+ VK++DFGL
Sbjct: 125 LDFLHANCI-VHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ +LH++ + VH L+ N L+ VK++DFGL
Sbjct: 125 LDFLHANCI-VHRDLKPENILVTSGGTVKLADFGL 158
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + ++ L+ N L+D +K++D+G+ P + T S + ++AP
Sbjct: 166 LNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPNYIAP 222
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEV 97
E+L G D ++ +++ E++ P+++
Sbjct: 223 EIL-----RGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + ++ L+ N L+D +K++D+G+ P + T S + ++AP
Sbjct: 119 LNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAP 175
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEV 97
E+L G D ++ +++ E++ P+++
Sbjct: 176 EIL-----RGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + ++ L+ N L+D +K++D+G+ P + T S + ++AP
Sbjct: 123 LNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAP 179
Query: 60 ELLPVTVIPGSPATQKGDVYSFSI 83
E+L +G+ Y FS+
Sbjct: 180 EIL------------RGEDYGFSV 191
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLNILTTPSEITKDSNYYNKLLWVAPE 60
+ +LH + ++ L+ N L+D K++DFG+ + +T + + ++APE
Sbjct: 137 LMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT-ATFCGTPDYIAPE 194
Query: 61 LLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEVAKQ 100
+L + PA D ++ ++L E++ P+E +
Sbjct: 195 ILQEMLY--GPAV---DWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ YLH + ++ L+ N L+D +K++D+G+ P + T S + ++AP
Sbjct: 134 LNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAP 190
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPYEV 97
E+L G D ++ +++ E++ P+++
Sbjct: 191 EIL-----RGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL-NILTTPSEITKDSNYYNKLLWVAP 59
+ Y H + +H L+ N LI+ +KI+DFGL P + K ++ L + AP
Sbjct: 113 IAYCHDRRV-LHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYTHEVVTLWYRAP 169
Query: 60 ELLPVTVIPGSPATQKGDVYSFSIILEEIV 89
++L + + D++S I E+V
Sbjct: 170 DVL----MGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGL 35
+ Y H + +H L+ N LI+ +KI+DFGL
Sbjct: 113 IAYCHDRRV-LHRDLKPQNLLINREGELKIADFGL 146
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 1 MTYLHSSELGVHGKLRSSNCLIDGRFVVKISDFGLN 36
+ YLH ++ +H ++ SN L+ +KI+DFG++
Sbjct: 150 IEYLHYQKI-IHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 3 YLHSSELGVHGKLRSSNCLIDGRF---VVKISDFGLNILTTPSEITKDSNYYNKLLWV-- 57
YLH + + VH L+ N L+ + +KI DFG+ ++ + +L +
Sbjct: 146 YLHQNNI-VHLDLKPQNILLSSIYPLGDIKIVDFGM---------SRKIGHACELREIMG 195
Query: 58 APELLPVTVIPGSPATQKGDVYSFSIILEEIVVRGGPY 95
PE L ++ P T D+++ II ++ P+
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,377,235
Number of Sequences: 62578
Number of extensions: 132557
Number of successful extensions: 945
Number of sequences better than 100.0: 592
Number of HSP's better than 100.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 592
length of query: 105
length of database: 14,973,337
effective HSP length: 70
effective length of query: 35
effective length of database: 10,592,877
effective search space: 370750695
effective search space used: 370750695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)