Query psy9351
Match_columns 297
No_of_seqs 146 out of 1564
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 16:56:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ll3_A Gluconate kinase; xylul 100.0 3.5E-59 1.2E-63 454.3 25.4 264 8-296 2-271 (504)
2 3ifr_A Carbohydrate kinase, FG 100.0 7.2E-59 2.5E-63 452.5 24.9 269 6-296 3-277 (508)
3 3hz6_A Xylulokinase; xylulose, 100.0 7.5E-59 2.6E-63 452.7 24.2 265 8-295 3-274 (511)
4 4e1j_A Glycerol kinase; struct 100.0 3.5E-58 1.2E-62 448.7 25.6 278 3-295 19-297 (520)
5 2p3r_A Glycerol kinase; glycer 100.0 2.4E-57 8.1E-62 442.0 26.5 269 9-295 2-275 (510)
6 3h3n_X Glycerol kinase; ATP-bi 100.0 5.6E-57 1.9E-61 439.1 27.2 270 9-295 4-277 (506)
7 3g25_A Glycerol kinase; IDP007 100.0 6.4E-57 2.2E-61 438.2 26.9 273 6-295 2-278 (501)
8 3ezw_A Glycerol kinase; glycer 100.0 1.2E-56 4.1E-61 438.6 26.6 273 9-296 3-277 (526)
9 2zf5_O Glycerol kinase; hypert 100.0 1.9E-55 6.4E-60 427.5 24.7 267 8-295 1-270 (497)
10 2dpn_A Glycerol kinase; thermu 100.0 5.6E-55 1.9E-59 424.0 26.1 267 10-295 2-273 (495)
11 2w40_A Glycerol kinase, putati 100.0 6.4E-55 2.2E-59 424.3 26.5 267 10-295 4-279 (503)
12 4bc3_A Xylulose kinase; transf 100.0 1.1E-54 3.9E-59 425.6 21.3 264 9-295 9-312 (538)
13 2d4w_A Glycerol kinase; alpha 100.0 1E-53 3.5E-58 415.9 26.1 270 10-295 2-276 (504)
14 2itm_A Xylulose kinase, xylulo 100.0 9.6E-54 3.3E-58 414.2 25.0 258 11-295 1-264 (484)
15 3jvp_A Ribulokinase; PSI-II, N 100.0 7.9E-54 2.7E-58 422.4 22.4 266 9-294 4-304 (572)
16 3h6e_A Carbohydrate kinase, FG 100.0 3.8E-53 1.3E-57 409.1 21.7 248 8-291 4-264 (482)
17 3i8b_A Xylulose kinase; strain 100.0 3.7E-53 1.2E-57 412.7 21.1 261 9-295 4-304 (515)
18 2uyt_A Rhamnulokinase; rhamnos 100.0 5.4E-53 1.9E-57 409.4 17.9 262 8-295 2-268 (489)
19 3l0q_A Xylulose kinase; xlylul 100.0 1.8E-51 6.1E-56 404.3 23.4 260 9-295 4-297 (554)
20 2qm1_A Glucokinase; alpha-beta 99.0 1.5E-09 5E-14 98.8 10.5 94 7-121 3-97 (326)
21 2yhw_A Bifunctional UDP-N-acet 98.8 2.7E-08 9.2E-13 91.3 10.1 95 10-127 30-127 (343)
22 1z05_A Transcriptional regulat 98.7 5E-08 1.7E-12 92.4 11.8 94 10-125 108-202 (429)
23 2hoe_A N-acetylglucosamine kin 98.7 2.9E-08 9.8E-13 92.6 10.0 93 10-123 87-180 (380)
24 3vgl_A Glucokinase; ROK family 98.7 3.1E-08 1.1E-12 90.2 8.9 88 10-125 2-90 (321)
25 1z6r_A MLC protein; transcript 98.7 5.4E-08 1.9E-12 91.4 9.7 93 9-123 84-178 (406)
26 1zc6_A Probable N-acetylglucos 98.6 8.3E-08 2.8E-12 86.6 9.2 85 1-106 1-89 (305)
27 4db3_A Glcnac kinase, N-acetyl 98.6 1.4E-07 4.6E-12 86.2 10.3 86 11-122 25-111 (327)
28 3r8e_A Hypothetical sugar kina 98.6 7.3E-08 2.5E-12 87.7 7.5 93 8-125 17-111 (321)
29 3htv_A D-allose kinase, alloki 98.5 7.5E-08 2.6E-12 87.4 5.3 86 11-121 8-94 (310)
30 2ch5_A NAGK protein; transfera 98.5 3.5E-07 1.2E-11 83.8 9.0 101 8-127 4-117 (347)
31 4htl_A Beta-glucoside kinase; 98.5 5.4E-07 1.8E-11 81.1 9.3 85 11-125 5-91 (297)
32 3epq_A Putative fructokinase; 98.4 9.6E-07 3.3E-11 79.8 9.3 83 10-125 3-91 (302)
33 1woq_A Inorganic polyphosphate 98.4 1.8E-06 6.1E-11 76.3 10.1 101 1-125 3-108 (267)
34 3vov_A Glucokinase, hexokinase 98.3 6.6E-07 2.2E-11 80.7 6.8 88 11-124 2-91 (302)
35 1hux_A Activator of (R)-2-hydr 98.2 1.4E-06 4.8E-11 77.4 6.5 70 10-102 3-72 (270)
36 2aa4_A Mannac kinase, putative 98.2 3.2E-06 1.1E-10 75.3 8.0 84 11-122 2-87 (289)
37 2ap1_A Putative regulator prot 98.1 1.2E-05 4.1E-10 73.0 10.3 86 10-121 24-110 (327)
38 2gup_A ROK family protein; sug 98.1 9.6E-06 3.3E-10 72.4 8.4 80 11-122 5-86 (292)
39 3mcp_A Glucokinase; structural 98.1 7.2E-06 2.5E-10 76.0 7.7 88 9-125 8-102 (366)
40 2e2o_A Hexokinase; acetate and 98.0 6.7E-06 2.3E-10 73.6 7.0 92 11-128 3-103 (299)
41 3lm2_A Putative kinase; struct 97.8 1.9E-05 6.5E-10 68.3 6.0 80 8-122 4-86 (226)
42 1sz2_A Glucokinase, glucose ki 97.7 5.5E-05 1.9E-09 68.9 7.2 79 9-119 13-91 (332)
43 2q2r_A Glucokinase 1, putative 97.6 9.7E-05 3.3E-09 68.3 6.6 85 9-120 28-115 (373)
44 1saz_A Probable butyrate kinas 97.5 4.7E-05 1.6E-09 70.9 4.2 81 10-111 2-85 (381)
45 3djc_A Type III pantothenate k 97.5 0.00025 8.5E-09 62.8 8.1 64 12-98 4-67 (266)
46 1zbs_A Hypothetical protein PG 97.5 0.00012 4.2E-09 65.3 6.1 68 12-98 2-69 (291)
47 1bdg_A Hexokinase; phosphotran 97.4 0.00037 1.3E-08 66.3 8.7 78 10-106 68-149 (451)
48 2yhx_A Hexokinase B; transfera 97.3 0.00039 1.3E-08 66.2 7.7 75 10-98 61-140 (457)
49 4ehu_A Activator of 2-hydroxyi 97.3 0.00055 1.9E-08 60.3 8.1 30 11-41 2-31 (276)
50 1cza_N Hexokinase type I; stru 97.3 0.00083 2.8E-08 69.3 10.0 85 10-112 78-169 (917)
51 3zyy_X Iron-sulfur cluster bin 97.1 0.0018 6.1E-08 63.7 9.4 84 9-97 205-298 (631)
52 1zxo_A Conserved hypothetical 96.9 0.00012 3.9E-09 65.5 -0.4 67 11-98 1-67 (291)
53 3o8m_A Hexokinase; rnaseh-like 96.8 0.0035 1.2E-07 59.9 9.1 74 11-98 81-158 (485)
54 1cza_N Hexokinase type I; stru 96.8 0.0019 6.6E-08 66.6 7.6 79 10-106 526-608 (917)
55 3bex_A Type III pantothenate k 96.8 0.0018 6.1E-08 56.6 5.8 62 11-97 4-65 (249)
56 2h3g_X Biosynthetic protein; p 96.7 0.004 1.4E-07 55.0 7.7 64 12-97 2-65 (268)
57 3h1q_A Ethanolamine utilizatio 96.6 0.0091 3.1E-07 52.0 9.6 57 8-68 26-82 (272)
58 4a2a_A Cell division protein F 96.2 0.029 9.8E-07 52.6 10.6 78 9-97 7-86 (419)
59 2ivn_A O-sialoglycoprotein end 94.6 0.092 3.1E-06 47.5 8.0 73 11-95 2-75 (330)
60 2ych_A Competence protein PILM 94.6 0.17 5.7E-06 46.1 9.7 58 9-68 12-70 (377)
61 3hm8_A Hexokinase-3; glucose, 94.2 0.14 4.8E-06 48.2 8.5 74 11-98 60-135 (445)
62 3f9m_A Glucokinase; hexokinase 93.8 0.16 5.4E-06 48.2 7.9 76 11-98 78-159 (470)
63 3mdq_A Exopolyphosphatase; str 93.5 0.21 7.3E-06 44.8 7.9 81 8-98 2-86 (315)
64 1t6c_A Exopolyphosphatase; alp 92.9 0.16 5.6E-06 45.6 6.2 77 11-98 13-94 (315)
65 3r9p_A ACKA; ssgcid, seattle s 90.8 0.62 2.1E-05 42.9 7.6 36 4-41 8-43 (391)
66 3nuw_A 2-OXO-3-deoxygalactonat 90.7 0.31 1.1E-05 43.3 5.4 37 6-44 2-38 (295)
67 4ijn_A Acetate kinase, acetoki 90.5 0.74 2.5E-05 42.5 7.9 35 5-40 19-53 (398)
68 3t69_A Putative 2-dehydro-3-de 90.5 0.24 8.2E-06 44.8 4.5 35 8-43 5-39 (330)
69 3eno_A Putative O-sialoglycopr 90.5 0.58 2E-05 42.3 7.1 75 10-96 6-81 (334)
70 1u6z_A Exopolyphosphatase; alp 90.1 0.49 1.7E-05 45.4 6.7 78 11-98 12-93 (513)
71 2f9w_A Pantothenate kinase; CO 89.4 0.47 1.6E-05 41.7 5.4 34 8-42 21-54 (271)
72 3cet_A Conserved archaeal prot 87.2 0.38 1.3E-05 43.4 3.4 30 12-43 2-31 (334)
73 3cer_A Possible exopolyphospha 86.8 0.92 3.1E-05 41.1 5.8 77 11-98 17-99 (343)
74 2ews_A Pantothenate kinase; PA 86.5 0.46 1.6E-05 42.1 3.5 25 11-37 21-45 (287)
75 4gni_A Putative heat shock pro 86.3 0.37 1.3E-05 44.4 2.9 25 8-34 11-35 (409)
76 3sk3_A Acetate kinase, acetoki 85.7 1.1 3.9E-05 41.6 5.9 34 7-40 16-49 (415)
77 1vhx_A Putative holliday junct 85.7 0.75 2.6E-05 36.6 4.1 24 11-35 4-27 (150)
78 2e1z_A Propionate kinase; TDCD 85.6 5.1 0.00017 37.2 10.2 34 9-42 17-50 (415)
79 3cqy_A Anhydro-N-acetylmuramic 85.6 3.5 0.00012 37.7 9.0 85 7-98 2-101 (370)
80 3r6m_A YEAZ, resuscitation pro 84.7 3.9 0.00013 34.4 8.3 62 11-96 3-64 (213)
81 1nbw_A Glycerol dehydratase re 84.5 2.2 7.4E-05 41.3 7.2 56 9-68 1-58 (607)
82 3hi0_A Putative exopolyphospha 83.3 1.8 6.2E-05 41.4 6.3 79 10-98 15-97 (508)
83 3en9_A Glycoprotease, O-sialog 80.6 6.6 0.00023 37.5 9.3 74 10-96 6-80 (540)
84 2gel_A Putative GRAM negative 80.4 7.6 0.00026 32.8 8.7 62 11-96 2-63 (231)
85 2iir_A Acetate kinase; transfe 79.9 2.2 7.7E-05 39.4 5.3 32 11-42 2-33 (403)
86 3qfu_A 78 kDa glucose-regulate 77.8 1 3.5E-05 40.9 2.4 20 10-29 18-37 (394)
87 1nu0_A Hypothetical protein YQ 77.8 4.9 0.00017 31.3 6.1 26 8-34 1-26 (138)
88 3qbx_A Anhydro-N-acetylmuramic 77.7 8.4 0.00029 35.2 8.4 82 10-98 2-97 (371)
89 3cj1_A Ectonucleoside triphosp 77.1 0.76 2.6E-05 43.4 1.4 55 10-68 34-96 (456)
90 1yuw_A Heat shock cognate 71 k 75.4 1.3 4.6E-05 42.7 2.6 20 9-28 3-22 (554)
91 1dkg_D Molecular chaperone DNA 74.4 1.3 4.5E-05 40.1 2.2 18 11-28 3-20 (383)
92 3khy_A Propionate kinase; csgi 73.0 5.7 0.00019 36.4 5.9 31 11-41 3-33 (384)
93 4b9q_A Chaperone protein DNAK; 71.4 2.5 8.7E-05 41.2 3.5 18 11-28 3-20 (605)
94 3i33_A Heat shock-related 70 k 70.2 2.3 8E-05 38.7 2.8 19 11-29 24-42 (404)
95 4h0p_A Acetate kinase; askha ( 70.1 5.2 0.00018 37.3 5.1 32 9-40 5-36 (438)
96 2d0o_A DIOL dehydratase-reacti 69.9 12 0.0004 36.2 7.5 68 9-92 1-71 (610)
97 2a6a_A Hypothetical protein TM 68.7 11 0.00037 31.7 6.4 63 11-97 13-75 (218)
98 1iv0_A Hypothetical protein; r 66.4 8.6 0.0003 28.0 4.7 21 12-33 3-23 (98)
99 3d2f_A Heat shock protein homo 65.4 3.6 0.00012 40.7 3.2 18 12-29 4-21 (675)
100 2v7y_A Chaperone protein DNAK; 64.7 4.3 0.00015 38.5 3.6 18 11-28 3-20 (509)
101 3bzc_A TEX; helix-turn-helix, 64.2 15 0.00052 36.9 7.5 31 9-40 328-359 (785)
102 1jce_A ROD shape-determining p 63.8 3.1 0.00011 37.0 2.2 17 11-27 4-20 (344)
103 1g99_A Acetate kinase; alpha/b 63.1 9.8 0.00033 35.2 5.4 32 11-42 2-33 (408)
104 2kho_A Heat shock protein 70; 62.1 4.1 0.00014 39.7 2.9 18 11-28 3-20 (605)
105 3mdq_A Exopolyphosphatase; str 60.8 21 0.00071 31.6 7.1 33 11-45 132-164 (315)
106 3psf_A Transcription elongatio 58.5 20 0.00067 37.3 7.2 31 9-40 518-553 (1030)
107 2zgy_A Plasmid segregation pro 56.3 7.1 0.00024 34.4 3.2 23 12-35 2-24 (320)
108 4ep4_A Crossover junction endo 56.0 44 0.0015 26.7 7.6 22 11-33 2-23 (166)
109 3zx3_A Ectonucleoside triphosp 55.4 4.3 0.00015 38.2 1.7 55 10-68 34-96 (452)
110 3aap_A Ectonucleoside triphosp 55.2 6.7 0.00023 35.5 2.8 20 10-29 3-22 (353)
111 1xho_A Chorismate mutase; sout 55.0 14 0.00047 29.0 4.2 37 54-98 44-80 (148)
112 4gib_A Beta-phosphoglucomutase 52.4 2.8 9.6E-05 35.2 -0.1 22 13-35 9-38 (250)
113 1dbf_A Protein (chorismate mut 51.9 16 0.00056 27.9 4.1 37 54-98 15-51 (127)
114 4apw_A ALP12; actin-like prote 50.7 6.9 0.00024 34.8 2.2 23 5-27 2-24 (329)
115 1ufy_A Chorismate mutase; shik 48.9 21 0.00073 27.1 4.3 37 54-98 14-51 (122)
116 3psi_A Transcription elongatio 47.0 38 0.0013 35.8 7.3 31 9-40 515-550 (1219)
117 1hjr_A Holliday junction resol 44.3 41 0.0014 26.6 5.6 22 11-33 2-23 (158)
118 4h0o_A Acetate kinase; askha ( 40.3 38 0.0013 31.2 5.4 28 10-39 14-41 (404)
119 2fsj_A Hypothetical protein TA 36.1 18 0.0006 32.4 2.4 19 8-26 19-37 (346)
120 1dw0_A Cytochrome C; asparagin 32.5 15 0.00052 27.5 1.2 29 160-192 83-111 (112)
121 3cer_A Possible exopolyphospha 30.6 33 0.0011 30.7 3.3 33 12-44 148-184 (343)
122 1t6c_A Exopolyphosphatase; alp 29.6 51 0.0018 29.0 4.4 32 11-44 139-170 (315)
123 2gvs_A Chemosensory protein CS 25.7 32 0.0011 25.6 1.9 47 122-174 37-87 (109)
124 1u6z_A Exopolyphosphatase; alp 23.6 86 0.003 29.6 5.0 32 12-45 139-170 (513)
125 1k8k_A ARP3, actin-like protei 23.6 32 0.0011 31.2 2.0 18 11-28 6-23 (418)
126 3h1q_A Ethanolamine utilizatio 21.2 70 0.0024 26.7 3.5 28 12-41 141-168 (272)
No 1
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=3.5e-59 Score=454.30 Aligned_cols=264 Identities=23% Similarity=0.283 Sum_probs=248.6
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
+++|+||||+|||++|++++|. +|++++..+.+++..+|.+|+.||||++||+.+.++++ + + +++.+ .
T Consensus 2 ~m~~~lgIDiGtts~K~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~----~-~---~~~~~---~ 69 (504)
T 3ll3_A 2 SLKYIIGMDVGTTATKGVLYDI-NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIF----D-L---TQKID---G 69 (504)
T ss_dssp CCEEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHTCS---S
T ss_pred CCCEEEEEEecCCceEEEEEcC-CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHH----H-H---HHhCC---C
Confidence 3569999999999999999997 89999999999998899999999999999999999999 7 5 34333 7
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhCh
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVP 167 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 167 (297)
+|.+|||++|++++|+||+ +|+|++|+|.|+|.|+.++++++++..+ .+.++++||.++.+.++++||+|+++|+|
T Consensus 70 ~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 145 (504)
T 3ll3_A 70 KIAAISWSSQMHSLIGLGS-DDELLTNSITWADNCAKSIVQDAKNRGF---AQQIYRKTGMPMHPMAPIYKLLWLKNKKT 145 (504)
T ss_dssp EEEEEEEEECSSCBEEECT-TSCBSSCEECTTCCTTHHHHHHHHHHTH---HHHHHHHHCCCSCTTSHHHHHHHHHHHCH
T ss_pred CeEEEEEECCCCcEEEECC-CCCCcccceeCCccCHHHHHHHHHhccC---HHHHHHHHCCCCCcccHHHHHHHHHHcCh
Confidence 8999999999999999999 7999999999999999999999988764 36899999999999999999999999999
Q ss_pred hhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcceee
Q psy9351 168 KVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYGH 247 (297)
Q Consensus 168 ~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G~ 247 (297)
++|+++ .+|++++|||.|+|||+ .++|+|+|++|++||+++++|++++|+.+||++++||+|+++++++|+
T Consensus 146 e~~~~~----~~~~~~~dyl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~ 216 (504)
T 3ll3_A 146 EVFSQA----QKWIGIKEYIIFRLTGK-----LVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFP 216 (504)
T ss_dssp HHHHHC----CEEECHHHHHHHHHHSC-----CEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGGGSCEEECTTCEECC
T ss_pred HHHHHH----hheeCHHHHHHHHHhCC-----cccchhHhhcccCeeCCCCCcCHHHHHHcCCCHHHCCCeeCCcceeec
Confidence 999998 69999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred c------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEecccccccccccC
Q psy9351 248 F------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTGN 296 (297)
Q Consensus 248 i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~~ 296 (297)
+ ++||++|+||++|++|++|+++|+|++++|++++++|||+++.++++.
T Consensus 217 l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~ 271 (504)
T 3ll3_A 217 IKTEYVKKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQ 271 (504)
T ss_dssp CCHHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEESS
T ss_pred cCHHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeCCC
Confidence 9 479999999999999999999999999999999999999999888753
No 2
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=7.2e-59 Score=452.49 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=251.2
Q ss_pred cccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 6 GQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 6 ~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
.+.++|+||||+|||++|++++|. +|+++++.+.+++..+|.+|+.||||++||+.+.++++ + + +++.+++
T Consensus 3 ~~~~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~----~-~---~~~~~~~ 73 (508)
T 3ifr_A 3 LAQGRQVIGLDIGTTSTIAILVRL-PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLA----E-L---KTTAGES 73 (508)
T ss_dssp ----CEEEEEEECSSEEEEEEEET-TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHHCGG
T ss_pred cccCCEEEEEEecCcceEEEEECC-CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHH----H-H---HHhcCCC
Confidence 344679999999999999999996 99999999999998899999999999999999999999 7 5 4556667
Q ss_pred CCCeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHh
Q psy9351 86 PTDIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNN 165 (297)
Q Consensus 86 ~~~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~ 165 (297)
+.+|.+|||++|++++|+||+ +|+|++|+|.|+|.|+.++++++++..+. +.++++||.++.+.++++||+|+++|
T Consensus 74 ~~~I~~Igis~~~~~~v~~D~-~G~~l~~~i~W~D~R~~~~~~~l~~~~~~---~~~~~~tG~~~~~~~~~~kl~wl~~~ 149 (508)
T 3ifr_A 74 DWRPGGICVTGMLPAVVLLDD-RGAVLRPSIQQSDGRCGDEVAELRAEVDS---EAFLARTGNGVTQQLVTAKLRWIERH 149 (508)
T ss_dssp GCCEEEEEEEECSSCBEEECT-TSCBCSCEECTTCCCCHHHHHHHHHHSCH---HHHHHHHSSCSSTTSHHHHHHHHHHH
T ss_pred hhheEEEEEECCCCcEEEECC-CCCCcccceeccccChHHHHHHHHhhccH---HHHHHHHCCCCChhhHHHHHHHHHHc
Confidence 789999999999999999999 69999999999999999999999988763 67999999999999999999999999
Q ss_pred ChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcce
Q psy9351 166 VPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIY 245 (297)
Q Consensus 166 ~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~ 245 (297)
+|++|+++ .+|+.++|||.|+|||+ .++|+|+|++|++||+++++|++++|+.+||++++||+|+++++++
T Consensus 150 ~p~~~~~~----~~~l~~~dyl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~ 220 (508)
T 3ifr_A 150 EPAVFGAI----ATVCGSYDYINMLLTGE-----RVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVL 220 (508)
T ss_dssp CHHHHHTC----SEEECHHHHHHHHHHCC-----CCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGGGSCCEECTTSEE
T ss_pred CHHHHHHH----hhhcCchHHHHHHhcCC-----ccccHhHhhcccCccCccCCCCHHHHHHcCCCHHHCCCCcCCCCee
Confidence 99999988 68999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred eec------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEecccccccccccC
Q psy9351 246 GHF------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTGN 296 (297)
Q Consensus 246 G~i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~~ 296 (297)
|++ ++||++|+||++|++|++|+++|+|++++|++++++|||+++.++++.
T Consensus 221 G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~ 277 (508)
T 3ifr_A 221 GAVTAEAAALTGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASAT 277 (508)
T ss_dssp EECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBSC
T ss_pred eccCHHHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeCCC
Confidence 999 369999999999999999999999999999999999999999988763
No 3
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=7.5e-59 Score=452.65 Aligned_cols=265 Identities=23% Similarity=0.285 Sum_probs=251.0
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
||+|+||||+|||++|++++|. +|++++..+.+++..+|.+|+.||||++||+.+.++++ + + + +.++++.
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~----~-~---~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR-DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIAS----S-W---W-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHH----H-H---H-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC-CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHH----H-H---H-hcCCChh
Confidence 3569999999999999999997 89999999999998899999999999999999999999 7 5 4 5666778
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhCh
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVP 167 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 167 (297)
+|.+|||++|++++|+||+ +|+|++|+|.|+|.|+.++++++++..+. +.++++||.++.+.++++||+|+++|+|
T Consensus 73 ~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~---~~~~~~tG~~~~~~~~~~kl~wl~~~~p 148 (511)
T 3hz6_A 73 RVSAIVLSGQMQNFLPLDQ-DHEPLHRAVLYSDKRPLKEAEEINARHGA---DNLWSALENPMTAASILPKLVFWRASFP 148 (511)
T ss_dssp GEEEEEEEECCSCBEEECT-TSCBSSCEECTTCCCCHHHHHHHHHHHCH---HHHHHHHSSCCSTTSHHHHHHHHHHHCH
T ss_pred HeEEEEEecccccEEEECC-CcCCCcCceecCCCCHHHHHHHHHhccCH---HHHHHHHCCCCCchhHHHHHHHHHHhCh
Confidence 9999999999999999999 69999999999999999999999887653 6799999999999999999999999999
Q ss_pred hhHhhhhcCceeeeC-hhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCccee
Q psy9351 168 KVKEAIDQNRCCIGT-VDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYG 246 (297)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G 246 (297)
++|+++ .+|++ ++|||.|+|||+ .++|+|+||+|++||+++++|++++|+.+||++++||+|+++++++|
T Consensus 149 ~~~~~~----~~~l~~~~dyl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G 219 (511)
T 3hz6_A 149 QAFGRL----RHVVLGAKDYVVLRLTGR-----HATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVG 219 (511)
T ss_dssp HHHTTC----CEEECSHHHHHHHHHHSC-----CEECHHHHHHTTCEETTTTEECHHHHHHTTCCGGGSCEECCTTSEEE
T ss_pred HHHHHH----HHHhcCcHHHHHHHHhCC-----ceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHHHCCCCcCCCCccc
Confidence 999988 68999 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred ec------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 247 HF------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 247 ~i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++ ++||++|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 220 ~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 274 (511)
T 3hz6_A 220 GVSALAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQ 274 (511)
T ss_dssp ECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEE
T ss_pred ccCHHHHHhhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecC
Confidence 99 47999999999999999999999999999999999999999998876
No 4
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-58 Score=448.73 Aligned_cols=278 Identities=43% Similarity=0.754 Sum_probs=255.1
Q ss_pred ccccccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHc
Q psy9351 3 QIKGQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQ 82 (297)
Q Consensus 3 ~~~~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~ 82 (297)
.+.+||++|+||||+|||++|++++|. +|++++..+.+++..+|++|+.||||++||+.+.++++ + + +++.
T Consensus 19 ~~~~MM~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~----~-~---~~~~ 89 (520)
T 4e1j_A 19 YFQSMMGGYILAIDQGTTSTRAIVFDG-NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVK----E-A---IEKS 89 (520)
T ss_dssp CCCCCCSCEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHTT
T ss_pred HHHHHhhCeEEEEEeCCcceEEEEECC-CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHH----H-H---HHhc
Confidence 356788899999999999999999997 99999999999998899999999999999999999999 7 5 4566
Q ss_pred CCCCCCeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHH
Q psy9351 83 GIEPTDIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWL 162 (297)
Q Consensus 83 ~~~~~~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl 162 (297)
++.+.+|.+|||+++++++|+||+++|+|++|+|.|+|.|+.++++++++... .+.++++||.++.+.++++||+|+
T Consensus 90 ~~~~~~I~~Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl 166 (520)
T 4e1j_A 90 GITANDIAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGL---EKTFVKKTGLLLDPYFSGTKLNWL 166 (520)
T ss_dssp TCCGGGEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSSCSSTTSHHHHHHHH
T ss_pred CCCcccEEEEEEeCCcceEEEEECCCCeECccccccccCCHHHHHHHHHhccc---HHHHHHHHCCCCCchhHHHHHHHH
Confidence 77778999999999999999999447999999999999999999999988754 367999999999999999999999
Q ss_pred HHhChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCC
Q psy9351 163 MNNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSS 242 (297)
Q Consensus 163 ~~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g 242 (297)
++|+|++|++++.+..+|++++|||.|+|||+ .+.++|+|+|++|++||+++++|++++|+.+||++++||+|++++
T Consensus 167 ~~~~Pe~~~~~~~~~~~~~~~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~ 243 (520)
T 4e1j_A 167 LSNVKGAQVRAAKGELCFGTIDTFLIWRLTGG---ECFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCA 243 (520)
T ss_dssp HHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTT---CCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGSCEEECSB
T ss_pred HHcChHHHHHHhcCCeEecCHHHHHHHHhcCC---CeeeecHHHhhhhcccccccCCCCHHHHHHcCCCHHHCCceecCC
Confidence 99999999998543356889999999999995 127999999999999999999999999999999999999999999
Q ss_pred cceeecc-cCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 243 EIYGHFV-SGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 243 ~~~G~i~-~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
+++|++. .||++|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 244 ~~~G~~~~~~l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 297 (520)
T 4e1j_A 244 ADFGVTDPSLFGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTG 297 (520)
T ss_dssp SCCCBCCHHHHTSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECT
T ss_pred CceeeeChhhCCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecC
Confidence 9999994 4788999999999999999999999999999999999998888774
No 5
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=2.4e-57 Score=442.01 Aligned_cols=269 Identities=44% Similarity=0.803 Sum_probs=249.3
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
++|+||||+|||++|++++|. +|++++..+.+++..+|++|+.||||++||+.+.++++ + + +++.++++.+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~----~-~---~~~~~~~~~~ 72 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH-DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLV----E-V---LAKADISSDQ 72 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHTTCCGGG
T ss_pred CcEEEEEEcCCcceEEEEECC-CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHH----H-H---HHHcCCChhh
Confidence 358999999999999999997 99999999999998899999999999999999999999 7 6 4567777889
Q ss_pred eeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChh
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPK 168 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 168 (297)
|.+|||++|++++|+||+++|+|++|+|.|+|.|+.++++++++... .+.++++||.++++.++++||+|+++|+|+
T Consensus 73 I~~Igis~~~~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 149 (510)
T 2p3r_A 73 IAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEG 149 (510)
T ss_dssp EEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTT
T ss_pred eEEEEEeCCcCcEEEEECCCCeECcccccccCccHHHHHHHHHhccc---HHHHHHHhCCCCCcccHHHHHHHHHHcCHH
Confidence 99999999999999999945999999999999999999999988654 368999999999999999999999999999
Q ss_pred hHhhhhcCceeeeChhHHHHHHHcC--CCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCccee
Q psy9351 169 VKEAIDQNRCCIGTVDTWIIWNLTG--GKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYG 246 (297)
Q Consensus 169 ~~~~~~~~~~~~~~~~dyi~~~LtG--~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G 246 (297)
++++++.+...|++++|||.|+||| + .++|+|+|++|++||+++++|++++|+.+||++++||+|+++++++|
T Consensus 150 ~~~~~~~~~~l~~~~~dyl~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G 224 (510)
T 2p3r_A 150 SRERARRGELLFGTVDTWLIWKMTQGRV-----HVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYG 224 (510)
T ss_dssp HHHHHHTTCEEEECHHHHHHHHHTTTSC-----CEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEE
T ss_pred HHHHHhcCCeEecCHHHHHHHHhcCCCe-----EEeehhHhhhhccccCccCCCCHHHHHHhCCCHHHCCceecCCCcee
Confidence 9999853335588999999999999 6 99999999999999999999999999999999999999999999999
Q ss_pred ecc---cCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 247 HFV---SGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 247 ~i~---~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++. +| ++|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 225 ~~~~~~lG-~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 275 (510)
T 2p3r_A 225 QTNIDGKG-GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTG 275 (510)
T ss_dssp EECTTCTT-SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECT
T ss_pred eechhhcC-CCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecC
Confidence 993 34 8999999999999999999999999999999999998777765
No 6
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=5.6e-57 Score=439.07 Aligned_cols=270 Identities=43% Similarity=0.748 Sum_probs=248.9
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
++|+||||+|||++|++++|. +|++++..+.+++..+|++|+.||||++||+.+.++++ + + +++.++.+.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~----~-~---~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR-NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIA----G-A---FIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC-CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHH----H-H---HHHcCCChhh
Confidence 459999999999999999997 99999999999998899999999999999999999999 7 5 4556777789
Q ss_pred eeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChh
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPK 168 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 168 (297)
|.+|||++|++++++||+++|+|++|+|.|+|.|+.++++++++... .+.++++||.++.+.++++||+|+++|+|+
T Consensus 75 I~~Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 151 (506)
T 3h3n_X 75 IAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGH---TEMIHEKTGLVIDAYFSATKVRWLLDNIEG 151 (506)
T ss_dssp EEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSCCCCTTSHHHHHHHHHHHSTT
T ss_pred eEEEEeeCCcccEEEEeCCCCeECCCceEecCcchHHHHHHHHhccC---HHHHHHHhCCCCCchhHHHHHHHHHHhCHH
Confidence 99999999999999999944999999999999999999999988754 368999999999999999999999999999
Q ss_pred hHhhhhcCceeeeChhHHHHHHHcC--CCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCccee
Q psy9351 169 VKEAIDQNRCCIGTVDTWIIWNLTG--GKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYG 246 (297)
Q Consensus 169 ~~~~~~~~~~~~~~~~dyi~~~LtG--~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G 246 (297)
++++++.+...|++++|||.|+||| + +++|+|+|++|++||+++++|++++|+.+||++++||+|+++++++|
T Consensus 152 ~~~~~~~~~~~~~~~~dyl~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G 226 (506)
T 3h3n_X 152 AQEKADNGELLFGTIDSWLVWKLTDGQV-----HVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYG 226 (506)
T ss_dssp HHHHHHTTCEEEECHHHHHHHHHTTTSC-----CEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEE
T ss_pred HHHHHhcCCeEEecHHHHHHHHhcCCce-----eeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHHHCCceecCCCcce
Confidence 9999854445699999999999999 5 89999999999999999999999999999999999999999999999
Q ss_pred ecccC--CCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 247 HFVSG--PLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 247 ~i~~G--l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++... +.+|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 227 ~~~~~~~lg~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 277 (506)
T 3h3n_X 227 HTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTG 277 (506)
T ss_dssp ECCGGGTTTCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEE
T ss_pred eeChHHhcCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecC
Confidence 99421 23799999999999999999999999999999999998887765
No 7
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=6.4e-57 Score=438.19 Aligned_cols=273 Identities=41% Similarity=0.755 Sum_probs=250.6
Q ss_pred cccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 6 GQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 6 ~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
-+|++|+||||+|||++|++++|. +|++++..+.+++..+|++|+.||||++||+.+.++++ + + +++.++.
T Consensus 2 ~aM~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~----~-~---~~~~~~~ 72 (501)
T 3g25_A 2 NAMEKYILSIDQGTTSSRAILFNQ-KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMT----E-V---INENDVR 72 (501)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHTTTCC
T ss_pred cccccEEEEEEeCccceEEEEEcC-CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHH----H-H---HHhcCCC
Confidence 357789999999999999999997 99999999999998899999999999999999999999 7 5 5566777
Q ss_pred CCCeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHh
Q psy9351 86 PTDIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNN 165 (297)
Q Consensus 86 ~~~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~ 165 (297)
+.+|.+|||++|++++++||+++|+|++|++.|+|.|+.++++++++... .+.+++.||.++++.++++||+|+++|
T Consensus 73 ~~~I~~Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~ 149 (501)
T 3g25_A 73 ADQIAGIGITNQRETTVVWDKHTGRPIYHAIVWQSRQTQSICSELKQQGY---EQTFRDKTGLLLDPYFAGTKVKWILDN 149 (501)
T ss_dssp GGGEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSCCSSTTSHHHHHHHHHHH
T ss_pred cccEEEEEEECCcCcEEEEECCCCeECCCceeeccCChHHHHHHHHhccC---HHHHHHHHCCCCCchhHHHHHHHHHHh
Confidence 78999999999999999999944999999999999999999999988654 368999999999999999999999999
Q ss_pred ChhhHhhhhcCceeeeChhHHHHHHHcC--CCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCc
Q psy9351 166 VPKVKEAIDQNRCCIGTVDTWIIWNLTG--GKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSE 243 (297)
Q Consensus 166 ~p~~~~~~~~~~~~~~~~~dyi~~~LtG--~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~ 243 (297)
+|+++++++.+...|++++|||.|+||| + .++|+|+|++|++||+++++|++++|+.+||++++||+|+++++
T Consensus 150 ~p~~~~~~~~~~~l~~~~~dyl~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~ 224 (501)
T 3g25_A 150 VEGAREKAENGDLLFGTIDTWLVWKLSGKAA-----HITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSE 224 (501)
T ss_dssp STTHHHHHHTTCEEEEEHHHHHHHHHTTTSC-----CEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEE
T ss_pred CHHHHHHHhcCCeEEecHHHHHHHHhcCCCe-----eeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHHHCCceecCCC
Confidence 9999999854335588999999999999 6 99999999999999999999999999999999999999999999
Q ss_pred ceeeccc-C-CCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 244 IYGHFVS-G-PLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 244 ~~G~i~~-G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++|++.. + +.+|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 225 ~~G~~~~~~~~g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 278 (501)
T 3g25_A 225 VYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTG 278 (501)
T ss_dssp EEEECCGGGTTTCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECT
T ss_pred ceeccchHHhCCCCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecC
Confidence 9999942 2 24799999999999999999999999999999999998888775
No 8
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.2e-56 Score=438.59 Aligned_cols=273 Identities=44% Similarity=0.788 Sum_probs=253.1
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
++|+||||+||||+|++|||. +|++++..+.+++..+|++||+||||++||+.++++++ + + ++++++++++
T Consensus 3 kkYvlgID~GTss~Ka~l~d~-~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~----~-~---l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH-DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLV----E-V---LAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEcC-CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHH----H-H---HHHcCCChhh
Confidence 579999999999999999997 99999999999999999999999999999999999999 7 6 5667888999
Q ss_pred eeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChh
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPK 168 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~ 168 (297)
|.+|||++|++++|+||+++|+|++|+|.|+|.|+.++++++.+... .+.+++.||.++++.++++||+|+++|+|+
T Consensus 74 I~aIgis~q~~~~v~~D~~~G~pl~~ai~W~D~R~~~~~~~l~~~~~---~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~ 150 (526)
T 3ezw_A 74 IAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEG 150 (526)
T ss_dssp EEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTT
T ss_pred EEEEEEeCCCCCEEEEECCCCeEcccceecCCcchHHHHHHHHhhcc---HHHHHHHhCCCCCcccHHHHHHHHHHcCch
Confidence 99999999999999999857999999999999999999999988754 367999999999999999999999999999
Q ss_pred hHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcceeec
Q psy9351 169 VKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYGHF 248 (297)
Q Consensus 169 ~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G~i 248 (297)
++++++.....+..+.+||.|+|||. ...++|+|+|++|++||+++++|++++++.+||++++||+++++++++|++
T Consensus 151 ~~~~~~~~~~~~~~i~~~L~~~Lt~g---~~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~~LP~i~~~~~~~G~~ 227 (526)
T 3ezw_A 151 SRERARRGELLFGTVDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQT 227 (526)
T ss_dssp HHHHHHTTCEEEECHHHHHHHHHTTT---SCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEE
T ss_pred HHHHHHHhhhhccchhHHHhhhhcCC---CceEEEchhhccccCcCccccCcCHHHHHHcCCCHHHCCCccccccccCcc
Confidence 99998655556889999999999975 237899999999999999999999999999999999999999999999999
Q ss_pred cc--CCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEecccccccccccC
Q psy9351 249 VS--GPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTGN 296 (297)
Q Consensus 249 ~~--Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~~ 296 (297)
.. .+..|+||++|++|++|+++|+|++++|++.+++|||+++.++|+.
T Consensus 228 ~~~~~~~~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~ 277 (526)
T 3ezw_A 228 NIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGE 277 (526)
T ss_dssp CTTCTTSCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTT
T ss_pred chhhhcCCCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCC
Confidence 43 4557899999999999999999999999999999999999988764
No 9
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.9e-55 Score=427.51 Aligned_cols=267 Identities=45% Similarity=0.768 Sum_probs=247.9
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
|++++||||+|||++|++++|. +|+++++.+.+++..+|.+|+.|||+++||+.+.++++ + + +++.++.++
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~-~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~----~-~---~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR-ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIK----D-A---IQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHH----H-H---HHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC-CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHH----H-H---HHhcCCCcc
Confidence 3468999999999999999997 89999999999998899999999999999999999999 7 5 445566678
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhCh
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVP 167 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 167 (297)
+|.+|||+++++++++||+ +|+|++|+|.|+|.|+.++++++++. . .+.+++.||.++.+.++++||+|+++|+|
T Consensus 72 ~i~~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~-~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 146 (497)
T 2zf5_O 72 QIAAIGVTNQRETTLVWDK-DGKPLYNAIVWQCRRTAEMVEEIKRE-Y---GTMIKEKTGLVPDAYFSASKLKWLLDNVP 146 (497)
T ss_dssp GEEEEEEEECSSCEEEECT-TCCBSSCEECTTCCTTHHHHHHHHHH-H---HHHHHHHHSSCCCTTSHHHHHHHHHHHST
T ss_pred cEEEEEEecCCCcEEEECC-CCCCcccceeecccCcHHHHHHHHhh-h---HHHHHHHhCCCCCchhHHHHHHHHHHcCH
Confidence 8999999999999999999 89999999999999999999999876 2 25799999999999999999999999999
Q ss_pred hhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcceee
Q psy9351 168 KVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYGH 247 (297)
Q Consensus 168 ~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G~ 247 (297)
+++++++.+...|++++|||.|+|||+ .++|+|+|+++++||+++++|++++|+.+||++++||+|+++++++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~d~l~~~LTG~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~ 221 (497)
T 2zf5_O 147 GLREKAEKGEVMFGTVDTFLIYRLTGE-----HVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGY 221 (497)
T ss_dssp THHHHHHTTCCEEEEHHHHHHHHHHSC-----CEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEE
T ss_pred HHHHHHhcCCCEEEcHHHHHHHHHhCC-----eeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHHHCCCcCCCCCeeee
Confidence 999998544456999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cc---cCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 248 FV---SGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 248 i~---~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
+. +| +|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 222 ~~~~~~g--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 270 (497)
T 2zf5_O 222 TKKELLG--AEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTD 270 (497)
T ss_dssp CCHHHHS--SCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEE
T ss_pred cCHHHcC--CCCeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEECC
Confidence 94 46 899999999999999999999999999999999999988775
No 10
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-55 Score=423.95 Aligned_cols=267 Identities=45% Similarity=0.771 Sum_probs=246.8
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
+++||||+|||++|++++|. +|++++..+.+++..+|.+|+.|+|+++||+.+.++++ + + +++.++.+.+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~-~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~----~-~---~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL-EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAR----E-V---LRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT-TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHH----H-H---HHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC-CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHH----H-H---HHhcCCCcccE
Confidence 47899999999999999997 99999999999998889999999999999999999999 7 5 45566667889
Q ss_pred eEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChhh
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPKV 169 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 169 (297)
.+|||+++++++++||+++|+|++|+|.|+|.|+.++++++++. .. .+.+++.||.++.+.++++||+|+++|+|++
T Consensus 73 ~~Igis~~~~~~~~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~-~~--~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 149 (495)
T 2dpn_A 73 LALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAK-GL--EPLFRERTGLLFDPYFSGTKLVWLLENVPGL 149 (495)
T ss_dssp CEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT-TC--HHHHHHHTSCCSCTTSHHHHHHHHHHHSSSH
T ss_pred EEEEEeCCCccEEEEECCCCcCCccceeecccChHHHHHHHHhc-cc--hhHHHHHhCCCCCchhHHHHHHHHHHcCHHH
Confidence 99999999999999999559999999999999999999999875 32 3579999999999999999999999999999
Q ss_pred HhhhhcCceeeeChhHHHHHHHcC--CCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcceee
Q psy9351 170 KEAIDQNRCCIGTVDTWIIWNLTG--GKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYGH 247 (297)
Q Consensus 170 ~~~~~~~~~~~~~~~dyi~~~LtG--~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G~ 247 (297)
|++++.+...|++++|||.|+||| + +++|+|+||+|++||+++++|++++|+.+||++++||+|+++++++|+
T Consensus 150 ~~~~~~~~~~~~~~~d~l~~~LTG~~~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~ 224 (495)
T 2dpn_A 150 KARAEGGGVAFGTVDTWLIWNLTGGKV-----HATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGE 224 (495)
T ss_dssp HHHHHHTCEEEECHHHHHHHHHTTTSC-----CEECHHHHTTSSSEETTTTEECHHHHHHTTCCSTTCCEECCTTSCCCB
T ss_pred HHHHhcCCcEEECHHHHHHHHhcCCCe-----EEEehHHhHhhcCccCccCCcCHHHHHHcCCCHHHCCCccCCCCeeEe
Confidence 999854445699999999999999 7 999999999999999999999999999999999999999999999999
Q ss_pred cc---cCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 248 FV---SGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 248 i~---~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
+. +| +|+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 225 ~~~~~~G--~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 273 (495)
T 2dpn_A 225 TLPELLG--APVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTG 273 (495)
T ss_dssp CCHHHHS--SCCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECT
T ss_pred ccHHHcC--CCCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcC
Confidence 94 57 899999999999999999999999999999999999998875
No 11
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=6.4e-55 Score=424.30 Aligned_cols=267 Identities=40% Similarity=0.742 Sum_probs=245.9
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHc--CCCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQ--GIEPT 87 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~--~~~~~ 87 (297)
+++||||+|||++|++++|. +|+++++.+.+++..+|.+|+.|+|+++||+.+.++++ + + +++. ++.+.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~-~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~----~-~---~~~~~~~~~~~ 74 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE-ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMN----E-G---IKVLKDKYTSV 74 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHH----H-H---HHHHHHHSSSC
T ss_pred cEEEEEEeCCcceEEEEECC-CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHH----H-H---HHHhhcCCCcc
Confidence 58999999999999999997 89999999999998889999999999999999999999 7 5 3333 45567
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhCh
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVP 167 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 167 (297)
+|.+|||+++++++++||+++|+|++|+|.|+|.|+.++++++.+... .+.++++||.++.+.++++||+|+++|+|
T Consensus 75 ~i~~Igis~~~~~~~~~D~~~G~~l~~~i~w~D~r~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p 151 (503)
T 2w40_A 75 IIKCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYN---NNDIQKKTGTYFNTYFSAFKILWLIQNNP 151 (503)
T ss_dssp EEEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHHSC---HHHHHHHHSSCCCSSSHHHHHHHHHHHCH
T ss_pred ceEEEEEcCCcceEEEEECCCCcCCccceeecccCcHHHHHHHHhccc---hHHHHHHhCCCCCcccHHHHHHHHHHhCh
Confidence 899999999999999999955999999999999999999999987632 36799999999999999999999999999
Q ss_pred hhHhhhhcCceeeeChhHHHHHHHcC-CCCCCceEeeccccccccCccCCCCCCcHHHhcccCCC-CCCCCCcccCCcce
Q psy9351 168 KVKEAIDQNRCCIGTVDTWIIWNLTG-GKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIP-MDILPTICSSSEIY 245 (297)
Q Consensus 168 ~~~~~~~~~~~~~~~~~dyi~~~LtG-~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~-~~~LP~l~~~g~~~ 245 (297)
+++++++.+...|++++|||.|+||| + .++|+|+||++++||+++++|++++|+.+||+ +++||+|+++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~d~l~~~LTG~~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~lP~i~~~~~~~ 226 (503)
T 2w40_A 152 EIKQKIDDGTAVIGNINTWLIFNLTKGN-----CYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNF 226 (503)
T ss_dssp HHHHHHHTTCEEEEEHHHHHHHHHHTSC-----CEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGGGSCEEECSEEEE
T ss_pred HHHHHHhcCCeEEECHHHHHHHHHcCCC-----ccccHHHhhhhcCccCCCCccCHHHHHHcCCChHHHCCCccCCcCce
Confidence 99999854445699999999999999 6 99999999999999999999999999999999 99999999999999
Q ss_pred eecc---cCCCC--CCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 246 GHFV---SGPLK--GVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 246 G~i~---~Gl~~--g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
|+++ +| + |+||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 227 G~~~~~~~g--~~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 279 (503)
T 2w40_A 227 GLVKSEHVP--DYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTG 279 (503)
T ss_dssp EECCCTTSG--GGTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECT
T ss_pred eeccHHHcC--CCCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecC
Confidence 9994 34 5 99999999999999999999999999999999999998875
No 12
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.1e-54 Score=425.63 Aligned_cols=264 Identities=19% Similarity=0.274 Sum_probs=238.5
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCC----CCee-------EeCHHH-HHHHHHHHHHhhhhHHHH
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPT----EGWV-------EQDPME-ILAVVNGTIEACQFSACV 76 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~----~g~~-------e~d~~~-~~~~i~~~i~~~~~~~~~ 76 (297)
++|+||||+|||++|++|||. +|+++++.+.+++..+|. +|+. ||||++ ||+.+..+++ .
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~-~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~----~--- 80 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA-ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE----K--- 80 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH----H---
T ss_pred CCEEEEEEEcCcCEEEEEECC-CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH----H---
Confidence 459999999999999999997 999999999999876664 5664 678875 6666655555 3
Q ss_pred HHHHHcCCCCCCeeEEEEcCccceEEEEeCCCCc--------------------cccccccccccCCHHHHHHHHHhCCC
Q psy9351 77 EKLKEQGIEPTDIVAVGVTNQRESTIAWDKITGE--------------------PLYNSIVWLDARTTSTLEKILEVVPN 136 (297)
Q Consensus 77 ~~l~~~~~~~~~I~~Igis~~~~~~v~vd~~~g~--------------------~~~~~i~w~D~R~~~~~~~l~~~~~~ 136 (297)
+++.++.+.+|.+|||++|++++|+||+ +|+ |++|+|.|+|.|+.++++++++.++.
T Consensus 81 --l~~~~~~~~~I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~ 157 (538)
T 4bc3_A 81 --MKASGFDFSQVLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGG 157 (538)
T ss_dssp --HHHTTCCGGGEEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTS
T ss_pred --HHHcCCChHHeEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCc
Confidence 4566777899999999999999999999 564 99999999999999999999887653
Q ss_pred ChhhhHHhhhCCCCCCcchHHHHHHHHHhChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceE-eeccccccccCccC
Q psy9351 137 KNKNYLAPLCGLPLSPYFSALKINWLMNNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYI-TDVSNASRTMLMNI 215 (297)
Q Consensus 137 ~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~-~d~s~a~~tgl~d~ 215 (297)
.+.++++||.++++.++++||+|+++|+|++|+++ .+|+.++|||.|+|||+ .+ +|+|+||+|++||+
T Consensus 158 --~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~----~~~~~~~d~l~~~LTG~-----~~~td~s~As~t~l~d~ 226 (538)
T 4bc3_A 158 --AQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHT----ERISLVSSFAASLFLGS-----YSPIDYSDGSGMNLLQI 226 (538)
T ss_dssp --HHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTE----EEEEEHHHHHHHHHHTS-----CCCCBHHHHTTSSCEET
T ss_pred --HHHHHHHHCCCCccccHHHHHHHHHHcCHHHHHHh----heEEcHHHHHHHHHhCC-----Ccccccchhhccccccc
Confidence 36799999999999999999999999999999988 79999999999999999 77 99999999999999
Q ss_pred CCCCCcHHHhcccCCC-CCCCCCcccCCcceeec------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEecccc
Q psy9351 216 ETLEWDPMLCGFFTIP-MDILPTICSSSEIYGHF------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGC 288 (297)
Q Consensus 216 ~~~~w~~~~l~~~gi~-~~~LP~l~~~g~~~G~i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~ 288 (297)
++++|++++|+.+|++ +++||+|+++++++|++ ++||++|+||++|++|++|+++|++ +++|++++++|||+
T Consensus 227 ~~~~W~~~ll~~~gi~~~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~-~~~g~~~~s~GTs~ 305 (538)
T 4bc3_A 227 QDKVWSQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMR-LEEGDIAVSLGTSD 305 (538)
T ss_dssp TTTEECHHHHHHHCTTHHHHHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTT-CCTTCEEEEESSSE
T ss_pred ccCCCCHHHHHHhCccHHHHCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhccc-cCCCcEEEEeccch
Confidence 9999999999999998 78999999999999999 4699999999999999999999995 89999999999999
Q ss_pred ccccccc
Q psy9351 289 FLLYNTG 295 (297)
Q Consensus 289 ~v~~~t~ 295 (297)
++.++++
T Consensus 306 ~~~~~~~ 312 (538)
T 4bc3_A 306 TLFLWLQ 312 (538)
T ss_dssp EEEEEES
T ss_pred heEEecC
Confidence 9988775
No 13
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1e-53 Score=415.90 Aligned_cols=270 Identities=46% Similarity=0.815 Sum_probs=246.5
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
+|+||||+|||++|++++|. +|+++++.+.+++..+|.+|+.|+|+++||+.+.++++ + + +++.++.+.+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~-~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~----~-~---~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH-SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVG----L-A---LTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC-CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHH----H-H---HHHcCCCcccE
Confidence 48999999999999999997 99999999999998889999999999999999999999 7 5 45566667889
Q ss_pred eEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChhh
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPKV 169 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 169 (297)
.+|||+++++++++||+++|+|++|+|.|+|.|+.++++++.+..+ .+.+++.||.++.+.++++||+|+++|+|++
T Consensus 73 ~~Igis~~g~~~v~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~ 149 (504)
T 2d4w_A 73 AAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEG---AEKYKSIVGLPLATYFSGPKIKWILDNVEGA 149 (504)
T ss_dssp EEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHCSSC---GGGGHHHHSCCSCTTSHHHHHHHHHHHSTTH
T ss_pred EEEEEeCCCCeEEEEECCCCCCccccceecccChHHHHHHHHhhcc---hHHHHHHhCCCCCchhHHHHHHHHHHcChhH
Confidence 9999999999999999955999999999999999999999987554 2679999999999999999999999999999
Q ss_pred HhhhhcCceeeeChhHHHHHHHcCCCCCCc---eEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCccee
Q psy9351 170 KEAIDQNRCCIGTVDTWIIWNLTGGKDGGK---YITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYG 246 (297)
Q Consensus 170 ~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~---~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G 246 (297)
+++++.+...|++++|||.|+|||. ++ .++|+|+||+|++||+++++|++++|+.+||++++||+|+++++++|
T Consensus 150 ~~~~~~~~~~~~~~~d~l~~~LTG~---~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G 226 (504)
T 2d4w_A 150 REKAEKGDLLFGNTDTWVLWNMTGG---TEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYG 226 (504)
T ss_dssp HHHHHHTCEEEECHHHHHHHHHTTT---TTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGGGSCEEECSEEEEE
T ss_pred HHHHhcCCeEEecHHHHHHHHhcCC---CcCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHHHCCCccCCcccee
Confidence 9998544456999999999999995 23 89999999999999999999999999999999999999999999999
Q ss_pred eccc-C-CCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 247 HFVS-G-PLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 247 ~i~~-G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
+++. . +.+ +||++|++|++|+++|+|++++|++++++|||+++.++++
T Consensus 227 ~~~~~~~~G~-~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 276 (504)
T 2d4w_A 227 HGRPRGLVPG-VPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTG 276 (504)
T ss_dssp ECCTTSSSTT-CEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECT
T ss_pred ccchHHhCCC-CeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecC
Confidence 9953 1 225 9999999999999999999999999999999999998885
No 14
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=9.6e-54 Score=414.21 Aligned_cols=258 Identities=23% Similarity=0.377 Sum_probs=239.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|||++|++++|. +|++++..+.+++..+|++|+.|+|+++||+.+.++++ + + +++. .+++|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~-~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~----~-~---~~~~--~~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE-QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMK----A-L---GDQH--SLQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHH----H-H---HHHS--CCTTCC
T ss_pred CEEEEEecCcccEEEEECC-CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHH----H-H---HHhC--CccceE
Confidence 3699999999999999997 89999999999998899999999999999999999999 7 5 3332 256899
Q ss_pred EEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHHHhChhhH
Q psy9351 91 AVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLMNNVPKVK 170 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~ 170 (297)
+|||+++++++|+||+ +|+|++|+|.|+|.|+.++++++++..+ .+++.||.++.+.++++||+|+++|+|+++
T Consensus 70 ~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~-----~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~ 143 (484)
T 2itm_A 70 ALGIAGQMHGATLLDA-QQRVLRPAILWNDGRCAQECTLLEARVP-----QSRVITGNLMMPGFTAPKLLWVQRHEPEIF 143 (484)
T ss_dssp EEEEEECSSCBEEECT-TCCBCSCEECTTCCTTHHHHHHHHHHCT-----THHHHHSSCCCTTSHHHHHHHHHHHCHHHH
T ss_pred EEEEcCCcCcEEEECC-CcCCCcccceecccCcHHHHHHHHHhHH-----HHHHHhCCCCCcccHHHHHHHHHHhChHHH
Confidence 9999999999999999 6999999999999999999999988753 366789999999999999999999999999
Q ss_pred hhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcceeec--
Q psy9351 171 EAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEIYGHF-- 248 (297)
Q Consensus 171 ~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~~G~i-- 248 (297)
+++ .+|+.++|||.|+|||+ .++|+|+|+++++||+++++|++++|+.+||++++||+|+++++++|++
T Consensus 144 ~~~----~~~l~~~d~l~~~LTG~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lp~i~~~~~~~G~~~~ 214 (484)
T 2itm_A 144 RQI----DKVLLPKDYLRLRMTGE-----FASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLP 214 (484)
T ss_dssp TTC----CEEECHHHHHHHHHHSC-----CEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGGGSCEEECTTSEEEECCH
T ss_pred HHH----hheeCcHHHHHHHHhCC-----ceeeHHHhhccccccCCCCCcCHHHHHHcCCCHHHCCCccCCcceeeccCH
Confidence 988 68999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred ----ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 249 ----VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 249 ----~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++||+ |+||++|++|++|+++|+|++++|++++++|||+++.+++.
T Consensus 215 ~~a~~~Gl~-g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 264 (484)
T 2itm_A 215 EVAKAWGMA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSE 264 (484)
T ss_dssp HHHHHHTSC-CCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECS
T ss_pred HHHHHhCCC-CCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEecC
Confidence 47999 99999999999999999999999999999999987776653
No 15
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=7.9e-54 Score=422.44 Aligned_cols=266 Identities=19% Similarity=0.303 Sum_probs=237.9
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeec-----cccCC------CCeeEeCHHHHHHHHHHHHHhhhhHHHHH
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLG-----QTFPT------EGWVEQDPMEILAVVNGTIEACQFSACVE 77 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~-----~~~~~------~g~~e~d~~~~~~~i~~~i~~~~~~~~~~ 77 (297)
++|+||||+|||++|++|+|.++|+++++.+.+++ ..+|+ +||+||||++||+.+.++++ + +
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~----~-~-- 76 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVP----A-V-- 76 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHH----H-H--
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHH----H-H--
Confidence 45999999999999999999538999999999987 55676 99999999999999999999 7 6
Q ss_pred HHHHcCCCCCCeeEEEEcCccceEEEEeCCCCccccc-----------cccccccCCHHHHHHHHHhCCCChhhhHHhhh
Q psy9351 78 KLKEQGIEPTDIVAVGVTNQRESTIAWDKITGEPLYN-----------SIVWLDARTTSTLEKILEVVPNKNKNYLAPLC 146 (297)
Q Consensus 78 ~l~~~~~~~~~I~~Igis~~~~~~v~vd~~~g~~~~~-----------~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~t 146 (297)
++++++.+.+|.+|||++|++++|+||+ +|+|++| +|.|+|.|+.++++++++.++. ..+.+++++
T Consensus 77 -l~~~~~~~~~I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~-~~~~~~~~t 153 (572)
T 3jvp_A 77 -MKESGVDADDVIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEK-RGEAFLPRY 153 (572)
T ss_dssp -HHC---CCSCEEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHH-HTCTTGGGG
T ss_pred -HHHcCCChhHEEEEEEecCCCcEEEECC-CCCCCccCccccccccccceecCccchHHHHHHHHHhccc-cHHHHHHHh
Confidence 5556677889999999999999999999 7999998 7999999999999999875420 014688999
Q ss_pred CCCCCCcchHHHHHHHHHhChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCC-cHHHh
Q psy9351 147 GLPLSPYFSALKINWLMNNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEW-DPMLC 225 (297)
Q Consensus 147 G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w-~~~~l 225 (297)
|.++++.++++||+|+++|+|++|+++ .+|++++|||.|+|||+ .++|+|+|+++++|| ++++| |+++|
T Consensus 154 G~~~~~~~~~~kl~wl~~~~Pe~~~~~----~~~l~~~dyl~~~LTG~-----~~~d~s~As~t~l~d-~~~~W~~~ell 223 (572)
T 3jvp_A 154 GGKISSEWMIAKVWQILDEAEDVYNRT----DQFLEATDWIVSQMTGK-----IVKNSCTAGYKAIWH-KREGYPSNEFF 223 (572)
T ss_dssp TTCCCSSSHHHHHHHHHHHHHHHHHHC----SEEEEHHHHHHHHHHSS-----CCEEHHHHHHHSCCB-TTTBSCCHHHH
T ss_pred CCCCCchhHHHHHHHHHHhCHHHHHHh----heEecHHHHHHHHhcCC-----ceeehhhccccceeC-CCCCcCCHHHH
Confidence 999999999999999999999999998 68999999999999999 999999999999999 99999 99999
Q ss_pred cccC-----CCCCCC-CCcccCCcceeec------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEeccccccccc
Q psy9351 226 GFFT-----IPMDIL-PTICSSSEIYGHF------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYN 293 (297)
Q Consensus 226 ~~~g-----i~~~~L-P~l~~~g~~~G~i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~ 293 (297)
+.+| +++++| |+|+++++++|++ ++||++|+||++|++|++|+++|+|++++|++++++|||.++.++
T Consensus 224 ~~~g~~l~~i~~~~L~p~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~ 303 (572)
T 3jvp_A 224 KALDPRLEHLTTTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLL 303 (572)
T ss_dssp HTTCGGGTTSTTTTTCSCEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSEEEEEE
T ss_pred HHhCcccccCCHhHCCCccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchhheeee
Confidence 9998 456667 8999999999999 479999999999999999999999999999999999999766655
Q ss_pred c
Q psy9351 294 T 294 (297)
Q Consensus 294 t 294 (297)
+
T Consensus 304 ~ 304 (572)
T 3jvp_A 304 G 304 (572)
T ss_dssp E
T ss_pred c
Confidence 4
No 16
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.8e-53 Score=409.12 Aligned_cols=248 Identities=13% Similarity=0.152 Sum_probs=225.7
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
||+|+||||+|||++|++++|. +|++++..+.+++. ++.+|+.||||++||+.+.++++ + + + ..
T Consensus 4 mm~~~lgIDiGTts~Ka~l~d~-~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~----~-~---~------~~ 67 (482)
T 3h6e_A 4 STGATIVIDLGKTLSKVSLWDL-DGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLS----R-Y---A------DH 67 (482)
T ss_dssp ----CEEEEECSSEEEEEEECT-TSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHH----H-T---T------TS
T ss_pred hhceEEEEEcCCCCeEEEEEEC-CCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHH----H-H---H------hc
Confidence 3568999999999999999996 99999999999985 68899999999999999999998 6 3 1 25
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCc--chHHHHHHHHHh
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPY--FSALKINWLMNN 165 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~--~~~~kl~wl~~~ 165 (297)
+|.+|||++|++++|+|| + |+|++|+|.|+|.|+.++++++.+..+ .+++||.++.+. ++++||+|+++|
T Consensus 68 ~I~aIgis~~~~~~v~~D-~-G~pl~~ai~w~D~R~~~~~~~l~~~~~------~~~~tG~~~~~~~~~~~~kl~Wl~~~ 139 (482)
T 3h6e_A 68 PVTTIVPVGHGAGIAALT-D-GRLAFPPLDYEQSIPEAVMADYRSQRD------PFARTGSPALPDGLNIGSQLWWLDQL 139 (482)
T ss_dssp CCCEEEEEECSSCEEEEE-T-TEECSCCBCTTSCCCHHHHHHHHTTCC------CHHHHCCCCCSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEecCcCCEEEEC-C-CCEeccccccCCcccHHHHHHHHhhCh------HHHHhCCCCCCCchhHHHHHHHHHHc
Confidence 799999999999999999 5 999999999999999999999877542 278999999997 899999999999
Q ss_pred ChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccc-cccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCcc
Q psy9351 166 VPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSN-ASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSEI 244 (297)
Q Consensus 166 ~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~-a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~~ 244 (297)
+|++|+++ . |++++|||.|+|||+ .++|+|+ ||+|++||+++++|+ ++|+.+||+ ++||+|++++++
T Consensus 140 ~Pe~~~~~----~-~l~~~dyl~~~LTG~-----~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~-~~LP~v~~~~~~ 207 (482)
T 3h6e_A 140 HPDVMANA----T-LLPWAQYWAWFLTGR-----AVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDT 207 (482)
T ss_dssp SHHHHHSC----E-EEEHHHHHHHHTTSC-----CCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCG-GGBCCEECTTSE
T ss_pred CchhhhcC----E-EEccHHHHHHHHhCC-----eeeecchhhhccCCccCCcCcHH-HHHHHcCCH-HhCCCCcCCCce
Confidence 99999987 6 999999999999999 9999998 899999999999999 599999999 999999999999
Q ss_pred eeec------ccCCCCCCcEEEecchHHHHHHh---cCCCCCCc-EEEEeccccccc
Q psy9351 245 YGHF------VSGPLKGVPISGCLGDQHAALLG---QNCLKPGL-AKSTYGTGCFLL 291 (297)
Q Consensus 245 ~G~i------~~Gl~~g~pV~~g~~D~~aa~~g---~g~~~~g~-~~~~~GTs~~v~ 291 (297)
+|++ ++||++|+||++|++|++|+++| +|++++|+ +++++|||.++.
T Consensus 208 ~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~ 264 (482)
T 3h6e_A 208 VGALLPAIAERTGLSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAM 264 (482)
T ss_dssp EEECCHHHHHHHTCCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEE
T ss_pred eeeeCHHHHHHhCCCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEE
Confidence 9999 46999999999999999999999 99999997 589999997653
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=3.7e-53 Score=412.69 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=234.1
Q ss_pred CCEEEEEecCCCcceEEEEe-CCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFS-ALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d-~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
++|+||||+|||++|+++|| . +|+++++.+.++ +|+.|||+++||+.+.++++ + .+. ..
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~-~G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~----~--------~~~-~~ 63 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE-TGELVRFGQAKH------PNGTSVDPSYWWSAFQEAAE----Q--------AGG-LD 63 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEC------CSSSEECTHHHHHHHHHHHH----H--------TTC-ST
T ss_pred CcEEEEEEeccccEEEEEEECC-CCeEEEEEEEeC------CCCceECHHHHHHHHHHHHH----h--------cCC-cc
Confidence 45999999999999999999 7 899999988876 36799999999999888776 4 223 57
Q ss_pred CeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCC-C------------hhhhHHhhhCCCCCCcc
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPN-K------------NKNYLAPLCGLPLSPYF 154 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~-~------------~~~~~~~~tG~~~~~~~ 154 (297)
+|.+|||++|++++|+||+ +|+|++|+|.|+|.|+.++++++++.++. . ..+.++++||.++.+.+
T Consensus 64 ~I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~ 142 (515)
T 3i8b_A 64 DVSALAVGGQQHGMVILDN-QGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASY 142 (515)
T ss_dssp TEEEEEEEECSSCBEEECT-TSCBCSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTS
T ss_pred CceEEEEeCCcceEEEECC-CCCCcCCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchh
Confidence 8999999999999999999 79999999999999999999999886531 0 01578999999999999
Q ss_pred hHHHHHHHHHhChhhHhhhhcCceeeeChhHHHHHHHcCCC--------CCCceEeeccccccccCccCCCCCCcHHHhc
Q psy9351 155 SALKINWLMNNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGK--------DGGKYITDVSNASRTMLMNIETLEWDPMLCG 226 (297)
Q Consensus 155 ~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~--------~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~ 226 (297)
+++||+|+++|+|++|+++ .+|++++|||.|+|||+. ++.++++|+|+|++|++||+++++|++++|+
T Consensus 143 ~~~kl~Wl~~~~Pe~~~~~----~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~ 218 (515)
T 3i8b_A 143 TLTKVAWVAENEPENVKKI----AAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIA 218 (515)
T ss_dssp HHHHHHHHHHHCHHHHTTC----SEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHH
T ss_pred HHHHHHHHHHcChHHHHHH----heecCHHHHHHHHhcCCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHH
Confidence 9999999999999999988 689999999999999981 1223589999999999999999999999999
Q ss_pred cc-CCC-----------CCCCCCcccCCcceeec------ccCCCCCCcEEEecchHHHHHHhcCCCCCCcEEEEecccc
Q psy9351 227 FF-TIP-----------MDILPTICSSSEIYGHF------VSGPLKGVPISGCLGDQHAALLGQNCLKPGLAKSTYGTGC 288 (297)
Q Consensus 227 ~~-gi~-----------~~~LP~l~~~g~~~G~i------~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~ 288 (297)
.+ ||+ +++||+|+++++++|++ ++||++|+||++|++|++|+++|+| +++|++++++|||+
T Consensus 219 ~~~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g-~~~g~~~~s~GTs~ 297 (515)
T 3i8b_A 219 MVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLG-MAVGDVSISLGTSG 297 (515)
T ss_dssp HHHHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTT-CCTTEEEEEESSSE
T ss_pred hhcCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHhhCC-CCCCcEEEEechhh
Confidence 98 998 78999999999999999 4799999999999999999999999 99999999999999
Q ss_pred ccccccc
Q psy9351 289 FLLYNTG 295 (297)
Q Consensus 289 ~v~~~t~ 295 (297)
++.+++.
T Consensus 298 ~~~~~~~ 304 (515)
T 3i8b_A 298 VAAAISE 304 (515)
T ss_dssp EEEECBS
T ss_pred hhhcccC
Confidence 9887653
No 18
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=5.4e-53 Score=409.35 Aligned_cols=262 Identities=16% Similarity=0.212 Sum_probs=234.6
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeec----cccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLG----QTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQG 83 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~----~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~ 83 (297)
.++++||||+|||++|++++|. +|+++...+.++. ..++.+|+.++|+++||+.+.++++ + + ..
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~-~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~----~-~---~~--- 69 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARY-ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLN----K-V---CA--- 69 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEE-EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHH----H-H---HH---
T ss_pred CcceEEEEEecCCCceEEEEEe-cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHH----H-H---Hh---
Confidence 3457999999999999999997 8988776655543 2356789999999999999999998 6 4 22
Q ss_pred CCCCCeeEEEEcCccceEEEEeCCCCccccccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHHHHHH
Q psy9351 84 IEPTDIVAVGVTNQRESTIAWDKITGEPLYNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKINWLM 163 (297)
Q Consensus 84 ~~~~~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~ 163 (297)
...+|.+|||++|++++++||+ +|+|++|+|.|+|.|+.++++++.+..+. +.++++||.++.+.++++||+|++
T Consensus 70 -~~~~i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~~---~~~~~~tG~~~~~~~~~~kl~Wl~ 144 (489)
T 2uyt_A 70 -AGIAIDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTNGLMAQAQQQLGK---RDIYQRSGIQFLPFNTLYQLRALT 144 (489)
T ss_dssp -TTCCCCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGTTHHHHHHHHHCH---HHHHHHHCCCCCTTSHHHHHHHHH
T ss_pred -CCCCceEEEEecCcccEEEECC-CCCCccCCccccCCccHHHHHHHHHhcCH---HHHHHHhCCCCCCccHHHHHHHHH
Confidence 2457999999999999999999 69999999999999999999999877642 679999999999999999999999
Q ss_pred HhChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeeccccccccCccCCCCCCcHHHhcccCCCCCCCCCcccCCc
Q psy9351 164 NNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTMLMNIETLEWDPMLCGFFTIPMDILPTICSSSE 243 (297)
Q Consensus 164 ~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tgl~d~~~~~w~~~~l~~~gi~~~~LP~l~~~g~ 243 (297)
+|+|++|+++ .+++.++|||.|+|||+ +++|+|+|++|++||+++++||+++|+.+||++++||+|+++++
T Consensus 145 ~~~P~~~~~~----~~~l~~~dyl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~ 215 (489)
T 2uyt_A 145 EQQPELIPHI----AHALLMPDYFSYRLTGK-----MNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGN 215 (489)
T ss_dssp HHCGGGGGGC----CEEEEHHHHHHHHHHSC-----CCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGGGSCCCBCTTC
T ss_pred hcCchHHHHh----hhccCcHHHHHHHHhCC-----ccceehhhhhhcccccCcCccCHHHHHHcCCCHHHCCCccCCCc
Confidence 9999999988 68999999999999999 99999999999999999999999999999999999999999999
Q ss_pred ceeecccCCCCCCcEEE-ecchHHHHHHhcCCCCCCcEEEEeccccccccccc
Q psy9351 244 IYGHFVSGPLKGVPISG-CLGDQHAALLGQNCLKPGLAKSTYGTGCFLLYNTG 295 (297)
Q Consensus 244 ~~G~i~~Gl~~g~pV~~-g~~D~~aa~~g~g~~~~g~~~~~~GTs~~v~~~t~ 295 (297)
++|++.....+|+||++ |++|++|+++|+|+.++|++++++|||.++.+.+.
T Consensus 216 ~~G~~~~~~~~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~ 268 (489)
T 2uyt_A 216 VIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQ 268 (489)
T ss_dssp EEEEEECTTCCEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEES
T ss_pred ceeeeecccCCCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhcccccC
Confidence 99998432337899997 88999999999999999999999999998877654
No 19
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1.8e-51 Score=404.35 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=234.7
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
++|+||||+|||++|++++|. +|++++..+.+++..+|++|+.||||++||+.+.++++ + + +++.++.+.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~-~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~----~-~---~~~~~~~~~~ 74 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL-QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVR----D-A---VNQADINPIQ 74 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHH----H-H---HHHHTCCGGG
T ss_pred CcEEEEEEECcccEEEEEECC-CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHH----H-H---HHHcCCCHhH
Confidence 349999999999999999997 99999999999998899999999999999999999999 7 6 4556777889
Q ss_pred eeEEEEcCccceEEEEeCCCCccc---------cccccccccCCHHHHHHHHHhCCCChhhhHHhhhCCCCCCcchHHHH
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPL---------YNSIVWLDARTTSTLEKILEVVPNKNKNYLAPLCGLPLSPYFSALKI 159 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~~~tG~~~~~~~~~~kl 159 (297)
|.+|||+++ +++|+||+ +|+|+ +|+|.|+|.|+.++++++++.. +.++++||.++++.++++||
T Consensus 75 I~~Igis~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~-----~~~~~~tG~~~~~~~~~~Kl 147 (554)
T 3l0q_A 75 VKGLGFDAT-CSLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATK-----HPVLEFVGGVISPEMQTPKL 147 (554)
T ss_dssp EEEEEEEEC-SCEEEEET-TSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHT-----CGGGGGBTTCCCTTSHHHHH
T ss_pred EEEEEEcCC-CceEEECC-CCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhH-----HHHHHHhCCCCChhhHHHHH
Confidence 999999998 79999999 69999 7999999999999999998762 46889999999999999999
Q ss_pred HHHHHhChhhHhhhhcCceeeeChhHHHHHHHcCCCCCCceEeecccccccc--CccCCCCCCcHHHhcccCCCC-----
Q psy9351 160 NWLMNNVPKVKEAIDQNRCCIGTVDTWIIWNLTGGKDGGKYITDVSNASRTM--LMNIETLEWDPMLCGFFTIPM----- 232 (297)
Q Consensus 160 ~wl~~~~p~~~~~~~~~~~~~~~~~dyi~~~LtG~~~~~~~~~d~s~a~~tg--l~d~~~~~w~~~~l~~~gi~~----- 232 (297)
+|+++|+|++|+++ .+|++++|||.|+|||+ . ++|+++.++ .||+++++|++++|+.+||++
T Consensus 148 ~Wl~~~~Pe~~~~~----~~~~~~~dyl~~~LTG~-----~--~~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~ 216 (554)
T 3l0q_A 148 LWLKQHMPNTWSNV----GHLFDLPDFLTWRATKD-----E--TRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNN 216 (554)
T ss_dssp HHHHHHCHHHHHHE----EEEEEHHHHHHHHHHSC-----C--CEEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHH
T ss_pred HHHHHhChHHHHHh----ceEEcHHHHHHHHHhCC-----c--cccccchhhccccccccCCCCHHHHHHcCCccccchh
Confidence 99999999999988 78999999999999999 5 356666664 488899999999999999996
Q ss_pred -CCCC-CcccCCccee-ec------ccCCCCCCcEEEecchHHHHHHhc-CCC-CCC-------cEEEEecccccccccc
Q psy9351 233 -DILP-TICSSSEIYG-HF------VSGPLKGVPISGCLGDQHAALLGQ-NCL-KPG-------LAKSTYGTGCFLLYNT 294 (297)
Q Consensus 233 -~~LP-~l~~~g~~~G-~i------~~Gl~~g~pV~~g~~D~~aa~~g~-g~~-~~g-------~~~~~~GTs~~v~~~t 294 (297)
++|| +|+++++++| +| ++||++|+||++|++|++|+++|+ |+. +|| ++++++|||+++.+++
T Consensus 217 ~~~Lp~~i~~~~~~~G~~lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~~~~~~ 296 (554)
T 3l0q_A 217 AAKIGATVKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMS 296 (554)
T ss_dssp HTTTCSCEECTTCBCTTSSCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEEEEEEE
T ss_pred HHhCCCcccCCcCeeCcccCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchheeeeec
Confidence 3899 6999999999 88 479999999999999999999997 765 788 7889999999887765
Q ss_pred c
Q psy9351 295 G 295 (297)
Q Consensus 295 ~ 295 (297)
.
T Consensus 297 ~ 297 (554)
T 3l0q_A 297 R 297 (554)
T ss_dssp S
T ss_pred C
Confidence 4
No 20
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.00 E-value=1.5e-09 Score=98.79 Aligned_cols=94 Identities=17% Similarity=0.288 Sum_probs=75.2
Q ss_pred ccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC
Q psy9351 7 QYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEP 86 (297)
Q Consensus 7 ~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~ 86 (297)
.|++|+||||+|+|++|++++|. +|+++...+.+++. +.+++++++.+.+.++ + + +++.+.+.
T Consensus 3 ~m~~~~lgiDiggt~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~----~-~---~~~~~~~~ 65 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTT-DGVVQQKWSIETNI--------LEDGKHIVPSIIESIR----H-R---IDLYNMKK 65 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCC--------TTTTTTHHHHHHHHHH----H-H---HHHTTCCG
T ss_pred CcccEEEEEEECCCEEEEEEECC-CCCEEEEEEEcCCC--------CCCHHHHHHHHHHHHH----H-H---HHHcCCCc
Confidence 35579999999999999999997 89999988777752 2467788999999998 6 5 45566666
Q ss_pred CCeeEEEEcCccceEEEEeCCCCccc-ccccccccc
Q psy9351 87 TDIVAVGVTNQRESTIAWDKITGEPL-YNSIVWLDA 121 (297)
Q Consensus 87 ~~I~~Igis~~~~~~v~vd~~~g~~~-~~~i~w~D~ 121 (297)
.+|.+|||+.+| ++|.++|..+ .|.+.|.+.
T Consensus 66 ~~i~~igi~~pG----~vd~~~g~v~~~~~l~w~~~ 97 (326)
T 2qm1_A 66 EDFVGIGMGTPG----SVDIEKGTVVGAYNLNWTTV 97 (326)
T ss_dssp GGEEEEEEEESS----EEETTTTEEECBGGGTBCSC
T ss_pred cceeEEEEeccc----ceeCCCCEEEecCCCCccCC
Confidence 789999999998 8897567665 455678765
No 21
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.76 E-value=2.7e-08 Score=91.31 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=71.9
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
.|+||||+|+|++|++++|. +|+++...+.+++ .+++++++.+.+.++ + +. ++.+....+|
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~----------~~~~~~~~~i~~~i~----~-~~---~~~~~~~~~i 90 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM-KGEIVKKYTQFNP----------KTYEERINLILQMCV----E-AA---AEAVKLNCRI 90 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET-TSCEEEEEEEECC----------SSHHHHHHHHHHHHH----H-HH---HHHHHTTEEE
T ss_pred cEEEEEEECCCEEEEEEECC-CCcEEEEEEEcCC----------CCHHHHHHHHHHHHH----H-HH---HhcccccCce
Confidence 58999999999999999997 8999987766653 367888899999888 6 53 2222345679
Q ss_pred eEEEEcCccceEEEEeCCCCcccc-ccc--cccccCCHHHH
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPLY-NSI--VWLDARTTSTL 127 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~~-~~i--~w~D~R~~~~~ 127 (297)
.+|||+.+| ++|.++|..+. |.+ .|.+..-.+.+
T Consensus 91 ~gigi~~pG----~vd~~~g~v~~~~~~~~~w~~~~l~~~l 127 (343)
T 2yhw_A 91 LGVGISTGG----RVNPREGIVLHSTKLIQEWNSVDLRTPL 127 (343)
T ss_dssp EEEEEEESS----EEETTTTEEEECCTTSSSCSSEECHHHH
T ss_pred EEEEEeccc----CEeCCCCEEEeCCcCCCCCcCCCHHHHH
Confidence 999999998 88986676653 444 68876654443
No 22
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.75 E-value=5e-08 Score=92.35 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=75.9
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
.|+||||+|+|++|++++|. +|+++...+.+++ ..+++++++.+.+.++ + + +++.+.+..+|
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~----~-~---~~~~~~~~~~i 169 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL-GGEVLIDTKIDIH---------EIDQDDVLARLLFEIE----E-F---FQTYAAQLDRV 169 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEEEECC---------CCBHHHHHHHHHHHHH----H-H---HHHTTTTCCEE
T ss_pred CEEEEEEECCCEEEEEEECC-CCCEEEEEEEcCC---------CCCHHHHHHHHHHHHH----H-H---HHhcCCCcCce
Confidence 48999999999999999998 8999998777764 1368999999999998 6 5 45566667789
Q ss_pred eEEEEcCccceEEEEeCCCCccc-cccccccccCCHH
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPL-YNSIVWLDARTTS 125 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~-~~~i~w~D~R~~~ 125 (297)
.+|||+.+| ++|.++|..+ .|.+.|.+..-.+
T Consensus 170 ~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~ 202 (429)
T 1z05_A 170 TSIAITLPG----LVNSEQGIVLQMPHYNVKNLALGP 202 (429)
T ss_dssp EEEEEEESS----EEETTTTEEEECSSSBCSSBCHHH
T ss_pred EEEEEeccC----cEeCCCCeEeecCCCCCCCCCHHH
Confidence 999999998 8898567665 4667798765433
No 23
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.75 E-value=2.9e-08 Score=92.58 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=73.7
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
.++||||+|+|++|++++|. +|+++...+.+++. +++++++++.+.+.++ + + +++.+.+..+|
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~-~G~vl~~~~~~~~~--------~~~~~~~~~~l~~~i~----~-~---~~~~~~~~~~i 149 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDA-SMNILAHEAHPLPS--------QSDREETLNVMYRIID----R-A---KDMMEKLGSKL 149 (380)
T ss_dssp CEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCS--------SCCHHHHHHHHHHHHH----H-H---HHHHHHTTCCC
T ss_pred CeEEEEEECCCEEEEEEECC-CCCEEEEEEEccCC--------CCCHHHHHHHHHHHHH----H-H---HHhcCCCcCcE
Confidence 58999999999999999998 89999988777651 2478999999999998 6 5 33344456789
Q ss_pred eEEEEcCccceEEEEeCCCCccc-cccccccccCC
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPL-YNSIVWLDART 123 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~-~~~i~w~D~R~ 123 (297)
.+|||+.+| ++|.++|... .|.+.|.+..-
T Consensus 150 ~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l 180 (380)
T 2hoe_A 150 SALTVAAPG----PIDTERGIIIDPRNFPLSQIPL 180 (380)
T ss_dssp CEEEEEESS----CEETTTTEECCCSSCTTBTSCH
T ss_pred EEEEEEeec----cEECCCCEEeccCCCCCcCCCh
Confidence 999999998 7897567665 46667987653
No 24
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.71 E-value=3.1e-08 Score=90.21 Aligned_cols=88 Identities=16% Similarity=0.227 Sum_probs=69.8
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
+|+||||+|+|++|++++|. +|+++.+.+.+++ .+++++++.+.+.++ + + ++ ..+|
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~-~G~i~~~~~~~~~----------~~~~~~~~~i~~~i~----~-~---~~-----~~~i 57 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE-EGRILSTFKVATP----------PTAEGIVDAICAAVA----G-A---SE-----GHDV 57 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT-TCCBCCCEEEECC----------SSHHHHHHHHHHHHH----H-H---HT-----TCCE
T ss_pred cEEEEEEECCCEEEEEEECC-CCCEEEEEEeeCC----------CCHHHHHHHHHHHHH----H-H---Hh-----hcCc
Confidence 48999999999999999997 8999987777662 468999999999888 6 4 21 2479
Q ss_pred eEEEEcCccceEEEEeCCCCccc-cccccccccCCHH
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPL-YNSIVWLDARTTS 125 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~-~~~i~w~D~R~~~ 125 (297)
.+|||+.+| ++|.++|... .|.+.|.+.+-.+
T Consensus 58 ~gigi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~ 90 (321)
T 3vgl_A 58 EAVGIGAAG----YVDDKRATVLFAPNIDWRHEPLKD 90 (321)
T ss_dssp EEEEEEESS----EECTTSSCEEECSSSCCEEECHHH
T ss_pred eEEEEeccc----cEeCCCCEEEeCCCCCCcCCCHHH
Confidence 999999998 8898566654 4566888765443
No 25
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.68 E-value=5.4e-08 Score=91.36 Aligned_cols=93 Identities=11% Similarity=0.043 Sum_probs=73.3
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
..|+||||+|+|++|++++|. +|+++...+.+++ +.+++++++.+.++++ + + +++.+.+..+
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~----~-~---~~~~~~~~~~ 145 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL-SSKLVVEESQELA---------LKDDLPLLDRIISHID----Q-F---FIRHQKKLER 145 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET-TCCEEEEEEEECC---------SSCSSCHHHHHHHHHH----H-H---HHHTGGGCCC
T ss_pred ccEEEEEEEcCCEEEEEEEcC-CCCEEEEEEecCC---------CCCHHHHHHHHHHHHH----H-H---HHhcCCCcCc
Confidence 358999999999999999998 8999998777663 2467788999999888 6 5 4445555678
Q ss_pred eeEEEEcCccceEEEEeCCCCccc-cccc-cccccCC
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPL-YNSI-VWLDART 123 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~-~~~i-~w~D~R~ 123 (297)
|.+|||+.+| ++|.++|.++ .|.+ .|.+..-
T Consensus 146 i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l 178 (406)
T 1z6r_A 146 LTSIAITLPG----IIDTENGIVHRMPFYEDVKEMPL 178 (406)
T ss_dssp EEEEEEEESS----EEETTTTEEEECTTCTTCSSBCH
T ss_pred eeEEEEEeec----CEeCCCCEEecCCCCCCccCCCH
Confidence 9999999998 8898567666 4555 6887643
No 26
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.64 E-value=8.3e-08 Score=86.64 Aligned_cols=85 Identities=15% Similarity=0.244 Sum_probs=60.5
Q ss_pred CcccccccC--CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHH
Q psy9351 1 MTQIKGQYG--PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEK 78 (297)
Q Consensus 1 ~~~~~~~~~--~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~ 78 (297)
|.+ .+||+ +|+||||+|+|++|++++|. +|+++.+.+.+... ..++++++++.+.+.++ + +
T Consensus 1 ~~~-~~m~~~~~~~lGiDiGgT~i~~~l~d~-~G~il~~~~~~~~~-------~~~~~~~~~~~l~~~i~----~-~--- 63 (305)
T 1zc6_A 1 MAR-QTMNPSIRYLIGVDGGGTGTRIRLHAS-DGTPLAMAEGGASA-------LSQGIAKSWQAVLSTLE----A-A--- 63 (305)
T ss_dssp --------CCCCEEEEEEECSSCEEEEEEET-TCCEEEEEEESCCC-------GGGCHHHHHHHHHHHHH----H-H---
T ss_pred Cch-hhhcccCCEEEEEEcCccceEEEEEcC-CCCEEEEEeCCCCC-------cccCHHHHHHHHHHHHH----H-H---
Confidence 555 33443 59999999999999999997 89999876553210 12578999999999998 6 5
Q ss_pred HHHcCCCCCCe--eEEEEcCccceEEEEeC
Q psy9351 79 LKEQGIEPTDI--VAVGVTNQRESTIAWDK 106 (297)
Q Consensus 79 l~~~~~~~~~I--~~Igis~~~~~~v~vd~ 106 (297)
+++.+.++.+| .+|||+.+| ++|.
T Consensus 64 l~~~~~~~~~i~~~~igig~pG----~v~~ 89 (305)
T 1zc6_A 64 FQQAGLPAAPASACAIGLGLSG----VHNR 89 (305)
T ss_dssp HHHTTCCCCCGGGEEEEEEESC----CCTT
T ss_pred HHhcCCChhhhccceEEEEecC----CCch
Confidence 45566666777 788888877 5666
No 27
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.62 E-value=1.4e-07 Score=86.23 Aligned_cols=86 Identities=15% Similarity=0.087 Sum_probs=68.0
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|+|++|++++|. +|+++.+.+.+++. .+++++++.+.+.++ + + +++. ..+.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~~---------~~~~~~~~~i~~~i~----~-~---~~~~----~~~~ 82 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE-KLERVATERVPTPT---------DDYPLLLETIAGLVA----K-Y---DQEF----ACEG 82 (327)
T ss_dssp CEEEEEECSSEEEEEEECT-TCCEEEEEEEECCT---------TCHHHHHHHHHHHHH----H-H---HHHH----TSCC
T ss_pred EEEEEEECCCEEEEEEEeC-CCcEEEEEEecCCC---------CCHHHHHHHHHHHHH----H-H---HHhc----CCcc
Confidence 7899999999999999998 99999988877641 268899999999888 6 4 2222 2478
Q ss_pred EEEEcCccceEEEEeCCCCccccccccc-cccC
Q psy9351 91 AVGVTNQRESTIAWDKITGEPLYNSIVW-LDAR 122 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~~~~i~w-~D~R 122 (297)
+|||+.+| ++|.++|.+..+.+.| .+..
T Consensus 83 gigi~~pG----~vd~~~g~v~~~~~~~~~~~~ 111 (327)
T 4db3_A 83 KIGLGLPG----MEDADDATVLTVNVPAAKGKP 111 (327)
T ss_dssp EEEEEESE----EECTTTCCEEESSSGGGTTSC
T ss_pred EEEEEeec----cEeCCCCEEEcCCCccccCCC
Confidence 99999988 8897578877777777 5544
No 28
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.59 E-value=7.3e-08 Score=87.71 Aligned_cols=93 Identities=13% Similarity=0.158 Sum_probs=71.4
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
...++||||+|+|++|++++|. +|+++.+.+.+++. ..+++++++.+.+.++ + + ++ ...
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~----~-~---~~----~~~ 75 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTP-EGEIQNATRFMTAD--------WVNGIGFVESMKLEIG----N-F---LK----QYP 75 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECT-TCCEEEEEEEEHHH--------HHTTTCHHHHHHHHHH----H-H---HH----HCT
T ss_pred cCcEEEEEEECCCEEEEEEEcC-CCcEEEEEEEeCCC--------CCCHHHHHHHHHHHHH----H-H---Hh----ccC
Confidence 4568999999999999999998 89999988877752 2467788888888888 6 4 22 256
Q ss_pred CeeEEEEcCccceEEEEeCCCCccc-ccccc-ccccCCHH
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPL-YNSIV-WLDARTTS 125 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~-~~~i~-w~D~R~~~ 125 (297)
+|.+|||+.+| ++|.++|.++ .+.+. |.+..-.+
T Consensus 76 ~i~gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~ 111 (321)
T 3r8e_A 76 IVKGVGIGWPG----LVSLDRTKVILLPNIPSVVNVPIVE 111 (321)
T ss_dssp TCCEEEEEESS----EECTTSCCEEEBTTBCCCCSCCHHH
T ss_pred CeeEEEEEecc----cEECCCCEEEeCCCCccccCCCHHH
Confidence 79999999998 8896568776 45555 98876443
No 29
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.51 E-value=7.5e-08 Score=87.37 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=64.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||||+|++|++++|. +|+++.+.+.+++. .+++++++.+.+.++ + + +++. ..+|.
T Consensus 8 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~~---------~~~~~~~~~i~~~i~----~-~---~~~~---~~~i~ 66 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTA-EGETLHCEKKRTAE---------VIAPGLVSGIGEMID----E-Q---LRRF---NARCH 66 (310)
T ss_dssp EEEEEEECSSEEEEEEEET-TSCEEEEEEEEHHH---------HHTTCHHHHHHHHHH----H-H---HHHH---TEEEE
T ss_pred EEEEEEeCCCEEEEEEECC-CCCEEEEEEecCcc---------ccHHHHHHHHHHHHH----H-H---HHhc---CCCee
Confidence 8999999999999999998 89999987776641 224557777777777 5 4 2322 23689
Q ss_pred EEEEcCccceEEEEeCCCCccc-ccccccccc
Q psy9351 91 AVGVTNQRESTIAWDKITGEPL-YNSIVWLDA 121 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~-~~~i~w~D~ 121 (297)
+|||+.+| ++|.++|.++ .|.+.|.+.
T Consensus 67 gigi~~pG----~vd~~~g~v~~~~~l~~~~~ 94 (310)
T 3htv_A 67 GLVMGFPA----LVSKDKRTIISTPNLPLTAA 94 (310)
T ss_dssp EEEEEESS----CBCTTSSCBCSCCSSSCCHH
T ss_pred EEEEeccc----cEeCCCCEEEeCCCCCCccc
Confidence 99999988 8897567765 456778653
No 30
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.48 E-value=3.5e-07 Score=83.76 Aligned_cols=101 Identities=14% Similarity=0.233 Sum_probs=72.0
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
|++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.++++ + + +++.+.+++
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~-~g~i~~~~~~~~~------~~~~~~~~~~~~~i~~~i~----~-~---~~~~~~~~~ 68 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSE-DGKILAEADGLST------NHWLIGTDKCVERINEMVN----R-A---KRKAGVDPL 68 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEET-TSCEEEEEEECCC------CHHHHCHHHHHHHHHHHHH----H-H---HHHHTCCTT
T ss_pred cceEEEEEEcCccceEEEEEeC-CCCEEEEEeCCCC------CcccCCHHHHHHHHHHHHH----H-H---HHhcCCCcc
Confidence 5569999999999999999997 8999987765321 1123578999999999998 6 5 444566566
Q ss_pred -CeeEEEEcCccceEEEEeCCCCccc------------cccccccccCCHHHH
Q psy9351 88 -DIVAVGVTNQRESTIAWDKITGEPL------------YNSIVWLDARTTSTL 127 (297)
Q Consensus 88 -~I~~Igis~~~~~~v~vd~~~g~~~------------~~~i~w~D~R~~~~~ 127 (297)
+|.+|||+.+| ++|.+++.++ .|+...+|.++....
T Consensus 69 ~~i~gigi~~pG----~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 69 VPLRSLGLSLSG----GDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp CCBSEEEEEETT----TTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred cceeEEEEeccC----CCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 79999999988 5554211121 244566777766554
No 31
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.45 E-value=5.4e-07 Score=81.09 Aligned_cols=85 Identities=19% Similarity=0.234 Sum_probs=61.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|+|++|++++|. +|+++.+.+.+++. .+++++++.+.+.+ ++ ..+|.
T Consensus 5 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~~---------~~~~~~~~~i~~~~------------~~----~~~i~ 58 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP-HGEIILTKSAEISG---------SDGDQILAEMKVFL------------AE----NTDVT 58 (297)
T ss_dssp CEEEEEECSSEEEEEEECT-TSCEEEEEEEECST---------TCHHHHHHHHHHHH------------HT----CTTCC
T ss_pred EEEEEEeCCCeEEEEEECC-CCCEEEEEEecCCC---------CCHHHHHHHHHHHH------------hh----cCCee
Confidence 6899999999999999997 99999988777641 23455554433322 22 35799
Q ss_pred EEEEcCccceEEEEeCCCCcccc-ccc-cccccCCHH
Q psy9351 91 AVGVTNQRESTIAWDKITGEPLY-NSI-VWLDARTTS 125 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~~-~~i-~w~D~R~~~ 125 (297)
+|||+.+| ++|.++|.++. |.+ .|.+..-.+
T Consensus 59 gigi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~ 91 (297)
T 4htl_A 59 GIAVSAPG----YVNPKTGLITMGGAIRRFDNFNLKE 91 (297)
T ss_dssp EEEEEESS----EECTTTCEEEECTTCGGGTTEEHHH
T ss_pred EEEEecCc----ceeCCCCEEEeCCCCCCccCCCHHH
Confidence 99999998 88976687764 445 488765433
No 32
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=98.39 E-value=9.6e-07 Score=79.76 Aligned_cols=83 Identities=16% Similarity=0.199 Sum_probs=59.3
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
+++||||||+|++|++++|. +|+++.+.+.+++ +++++++.+.+.++ ..+|
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~t~-----------~~~~~l~~i~~~~~-----------------~~~i 53 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE-DGTIIDRIEFPTX-----------MPDETIEXVIQYFS-----------------QFSL 53 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT-TSCEEEEEEEECC-----------CHHHHHHHHHHHHT-----------------TSCC
T ss_pred cEEEEEEECcceeEEEEEEC-CCcEEEEEEecCC-----------ChHHHHHHHHHHhc-----------------cCCc
Confidence 57899999999999999997 9999988777653 35555544333222 2469
Q ss_pred eEEEEcCccceEEEEeCCC-----Cccc-cccccccccCCHH
Q psy9351 90 VAVGVTNQRESTIAWDKIT-----GEPL-YNSIVWLDARTTS 125 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~-----g~~~-~~~i~w~D~R~~~ 125 (297)
.+|||+.+| ++|.++ |... .|...|.+..-.+
T Consensus 54 ~gigi~~pG----~vd~~~~~~~~G~i~~~~~~~w~~~~l~~ 91 (302)
T 3epq_A 54 QAIGIGSFG----PVDNDXTSQTYGTITATPXAGWRHYPFLQ 91 (302)
T ss_dssp SEEEEEECS----SEECCTTSTTTTEECCCSSTTTBTCCHHH
T ss_pred eEEEEEece----eeccccccccccEEecCCCCCccCCChHH
Confidence 999999988 788754 4444 3555788765433
No 33
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.36 E-value=1.8e-06 Score=76.34 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=62.8
Q ss_pred CcccccccCCEEEEEecCCCcceEEEEeCCC-CeEEEE-EEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHH
Q psy9351 1 MTQIKGQYGPLVGAIDEGTSSCRFIVFSALT-GKLVAK-HQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEK 78 (297)
Q Consensus 1 ~~~~~~~~~~~~lgIDiGtt~ik~~l~d~~~-g~v~~~-~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~ 78 (297)
|++-++....++||||+|+|++|++++|. + |+++.. .+.+++ ...+++++++.+.+.++ + +
T Consensus 3 ~~~~~~~~~~~~lgidiggt~i~~~l~dl-~~g~i~~~~~~~~~~--------~~~~~~~~~~~i~~~i~----~-~--- 65 (267)
T 1woq_A 3 KKDEKSHKNAPLIGIDIGGTGIKGGIVDL-KKGKLLGERFRVPTP--------QPATPESVAEAVALVVA----E-L--- 65 (267)
T ss_dssp --------CCCEEEEEECSSEEEEEEEET-TTTEEEEEEEEEECC--------SSCCHHHHHHHHHHHHH----H-H---
T ss_pred cchhhcCCCCEEEEEEECCCEEEEEEEEC-CCCeEEEEEEecCCC--------ccCCHHHHHHHHHHHHH----H-H---
Confidence 45556666668999999999999999997 6 787743 344443 11367888888888887 6 4
Q ss_pred HHHcCCCCCCeeEEEEcCccceEEEEeCCCCccc-cccc--cccccCCHH
Q psy9351 79 LKEQGIEPTDIVAVGVTNQRESTIAWDKITGEPL-YNSI--VWLDARTTS 125 (297)
Q Consensus 79 l~~~~~~~~~I~~Igis~~~~~~v~vd~~~g~~~-~~~i--~w~D~R~~~ 125 (297)
+++.+ ....+.+|||+.+| ++|. |..+ .|.+ .|.+..-.+
T Consensus 66 ~~~~~-~~~~~~~igi~~pG----~v~~--g~v~~~~~l~~~w~~~~l~~ 108 (267)
T 1woq_A 66 SARPE-APAAGSPVGVTFPG----IIQH--GVVHSAANVDKSWLNTDIDA 108 (267)
T ss_dssp HTSTT-CCCTTCCEEEEESS----CEET--TEECCCTTSCGGGTTCBHHH
T ss_pred HHhcc-ccCccceEEEEccc----eEcC--CEEEeCCCCCCCCCCCCHHH
Confidence 22211 12345678999887 6673 6665 3555 488765433
No 34
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.33 E-value=6.6e-07 Score=80.74 Aligned_cols=88 Identities=17% Similarity=0.102 Sum_probs=63.9
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
|+||||+|+|++|++++|. ++ ++...+.+++. .+.+++++.+.+.++ + + +++. ..+|.
T Consensus 2 ~~lgiDiGgt~i~~~l~d~-~~-~l~~~~~~~~~---------~~~~~~~~~i~~~i~----~-~---~~~~---~~~i~ 59 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG-KR-LLSKVVVPTPK---------EGGERVAEALAEAAE----R-A---EREA---GVRGE 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECS-SS-BSCCEEEECCS---------SCHHHHHHHHHHHHH----H-H---HHHH---TCCCS
T ss_pred EEEEEEEcCCEEEEEEEeC-CC-cEEEEEEcCCC---------CChHHHHHHHHHHHH----H-H---Hhhc---cCCce
Confidence 7899999999999999997 64 55666666641 234788888888888 6 4 2222 46789
Q ss_pred EEEEcCccceEEEEeCCCCccc-cccc-cccccCCH
Q psy9351 91 AVGVTNQRESTIAWDKITGEPL-YNSI-VWLDARTT 124 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~-~~~i-~w~D~R~~ 124 (297)
+|||+.+| ++|.++|... .+.+ .|.+..-.
T Consensus 60 gigi~~pG----~vd~~~g~v~~~~~~~~w~~~~l~ 91 (302)
T 3vov_A 60 AIGLGTPG----PLDFRRGVIRFAPNIPGVQDFPIR 91 (302)
T ss_dssp SEEEEESS----CEETTTTEEC---CCTTCTTCCHH
T ss_pred EEEEEecc----cEeCCCCEEEcCCCCCCcCCCChH
Confidence 99999988 8897667666 4555 68876533
No 35
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.23 E-value=1.4e-06 Score=77.43 Aligned_cols=70 Identities=16% Similarity=0.242 Sum_probs=51.2
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
+++||||+|+|++|++++|. +|+++.....+++. +|. +.+.++++ + + .+.++...+|
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~-~g~i~~~~~~~~~~----------~~~---~~~~~~l~----~-l----~~~~~~~~~i 59 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKD-GKEIVAKSLVAVGT----------GTS---GPARSISE----V-L----ENAHMKKEDM 59 (270)
T ss_dssp CEEEEEEECSSEEEEEEEET-TTEEEEEEEEECCS----------SCC---HHHHHHHH----H-H----HHHTCCGGGC
T ss_pred cEEEEEEeccceEEEEEEeC-CCCEEEEEEecCCC----------CHH---HHHHHHHH----H-H----HHcCCChhHE
Confidence 48999999999999999996 89999988777741 232 34555565 4 3 2224456778
Q ss_pred eEEEEcCccceEE
Q psy9351 90 VAVGVTNQRESTI 102 (297)
Q Consensus 90 ~~Igis~~~~~~v 102 (297)
.+|++++++..++
T Consensus 60 ~~i~~TG~g~~~~ 72 (270)
T 1hux_A 60 AFTLATGYGRNSL 72 (270)
T ss_dssp SEEEEESTTTTTT
T ss_pred EEEEEeCccccch
Confidence 9999999876544
No 36
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.19 E-value=3.2e-06 Score=75.31 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=62.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|+|++|++++|. +|+++.+.+.+++. ..+++++++.+.+.++ + + + .++.
T Consensus 2 ~~lgidiggt~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~----~-~---~-------~~~~ 57 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA-DGQIRDRRELPTPA--------SQTPEALRDALSALVS----P-L---Q-------AHAQ 57 (289)
T ss_dssp CEEEEEECSSEEEEEEECT-TCCEEEEEEEECCS--------SCCHHHHHHHHHHHHT----T-T---G-------GGCS
T ss_pred eEEEEEeCCCEEEEEEECC-CCCEEEEEEecCCC--------CCCHHHHHHHHHHHHH----H-H---H-------hhCC
Confidence 5899999999999999997 89999988777641 1357888888888777 5 3 1 1245
Q ss_pred EEEEcCccceEEEEeCCCCccc-cccc-cccccC
Q psy9351 91 AVGVTNQRESTIAWDKITGEPL-YNSI-VWLDAR 122 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~-~~~i-~w~D~R 122 (297)
+||++.+| ++|.++|..+ .|.+ .|.+..
T Consensus 58 ~igi~~pG----~vd~~~g~v~~~~~~~~w~~~~ 87 (289)
T 2aa4_A 58 RVAIASTG----IIRDGSLLALNPHNLGGLLHFP 87 (289)
T ss_dssp EEEEEESS----EEETTEEECSSGGGGGGGTTCC
T ss_pred EEEEEecc----ceeCCCCEEEeCCCCCcccCCC
Confidence 78888888 8898556555 3455 487765
No 37
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.12 E-value=1.2e-05 Score=72.98 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=63.3
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
.++||||+|+|++|++++|. +|+++.+.+.+++. .+++++++.+.+.++ + + ..+. ..+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~-~g~il~~~~~~~~~---------~~~~~~~~~i~~~i~----~-~---~~~~----~~i 81 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS-TRRLQWEKRVPTPH---------TSYSAFLDAVCELVE----E-A---DQRF----GVK 81 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCC---------SCHHHHHHHHHHHHH----H-H---HHHH----TSC
T ss_pred ceEEEEEECCCEEEEEEEeC-CCCEEEEEEecCCC---------CCHHHHHHHHHHHHH----H-H---HHhc----CCc
Confidence 47999999999999999998 89999887776641 257788888888887 5 4 2222 248
Q ss_pred eEEEEcCccceEEEEeCCCCccccccc-ccccc
Q psy9351 90 VAVGVTNQRESTIAWDKITGEPLYNSI-VWLDA 121 (297)
Q Consensus 90 ~~Igis~~~~~~v~vd~~~g~~~~~~i-~w~D~ 121 (297)
.+|||+.+| ++|.++|....+.+ .|.+.
T Consensus 82 ~~igi~~pG----~vd~~~g~v~~~~~~~~~~~ 110 (327)
T 2ap1_A 82 GSVGIGIPG----MPETEDGTLYAANVPAASGK 110 (327)
T ss_dssp CEEEEEESS----BSCCTTSCCBCTTCTTTTTS
T ss_pred cEEEEEeee----eEECCCCEEEccCCCccCCC
Confidence 889999988 78875576654333 35443
No 38
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=98.07 E-value=9.6e-06 Score=72.37 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=57.2
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|+|++|++++|. +|+++...+.+++ .+++++.+.+.+.++ + .++.
T Consensus 5 ~~lgidiggt~i~~~l~d~-~g~il~~~~~~~~----------~~~~~~~~~i~~~i~------------~-----~~i~ 56 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTP-DGKILDKTSISTP----------ENLEDLLAWLDQRLS------------E-----QDYS 56 (292)
T ss_dssp CEEEEEEETTEEEEEEECT-TCCEEEEEEECCC----------SSHHHHHHHHHHHHT------------T-----SCCS
T ss_pred EEEEEEECCCEEEEEEECC-CCCEEEEEEEeCC----------CCHHHHHHHHHHHHH------------h-----CCCc
Confidence 4899999999999999997 8999987766553 245665544433222 1 5689
Q ss_pred EEEEcCccceEEEEeCCCCccc-ccccc-ccccC
Q psy9351 91 AVGVTNQRESTIAWDKITGEPL-YNSIV-WLDAR 122 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~~~-~~~i~-w~D~R 122 (297)
+|||+.+| ++|.++|... .|.+. |.+..
T Consensus 57 gigi~~pG----~vd~~~g~v~~~~~~~~~~~~~ 86 (292)
T 2gup_A 57 GIAMSVPG----AVNQETGVIDGFSAVPYIHGFS 86 (292)
T ss_dssp EEEEEESS----EECTTTCBEESCCSSGGGSSSB
T ss_pred EEEEEecC----cccCCCCEEEecCCCCcccCCC
Confidence 99999988 8897567665 34554 65553
No 39
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=98.06 E-value=7.2e-06 Score=76.03 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=66.6
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEE-EeeeccccCCCCeeEeCHHHHHHHHHH---HHHhhhhHHHHHHHHHcCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKH-QISLGQTFPTEGWVEQDPMEILAVVNG---TIEACQFSACVEKLKEQGI 84 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~-~~~~~~~~~~~g~~e~d~~~~~~~i~~---~i~~~~~~~~~~~l~~~~~ 84 (297)
..++||||||+|++|++++| +|+++.+. +.+++ . .+++++++.+.+ .++ + + .
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d--~G~il~~~~~~~~~--------~-~~~~~~l~~i~~~~~~i~----~-~--------~ 63 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ--GGKEIADPVVLPAC--------A-DCLDKCLGNLVEGFKAIQ----A-G--------L 63 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE--TTEECSCCEEEECC--------T-TCHHHHHHHHHHHHHHHH----T-T--------C
T ss_pred CCEEEEEEECcceEEEEEEE--CCEEEEEEEEEECC--------C-CCHHHHHHHHHHHHHHHH----H-H--------h
Confidence 45899999999999999999 59998866 66664 1 168888888888 554 3 2 1
Q ss_pred CCCCeeEEEEcCccceEEEEeCCCCccc-cccc-ccc-ccCCHH
Q psy9351 85 EPTDIVAVGVTNQRESTIAWDKITGEPL-YNSI-VWL-DARTTS 125 (297)
Q Consensus 85 ~~~~I~~Igis~~~~~~v~vd~~~g~~~-~~~i-~w~-D~R~~~ 125 (297)
..+|.+|||+.+| ++|.++|... .|.+ .|. +..-.+
T Consensus 64 -~~~i~gIGIavPG----~Vd~~~G~i~~~~nlp~w~~~~~l~~ 102 (366)
T 3mcp_A 64 -PEAPVAISFAFPG----PADYQAGIIGDLPNFPSFRGGVALGP 102 (366)
T ss_dssp -SSCCCEEEEECCS----SEETTTTEECCCTTCGGGTTCBCHHH
T ss_pred -hcCCeEEEEEecc----eEeCCCCEEEeCCCcccccCCCCHHH
Confidence 1679999999998 8897678776 4566 798 665333
No 40
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=98.04 E-value=6.7e-06 Score=73.63 Aligned_cols=92 Identities=12% Similarity=0.198 Sum_probs=63.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
|+||||+|+|++|++++|. +|+++...+.+++. +.+++++++++.+.+.++ + + +++ .+.
T Consensus 3 ~~lgiDiGgt~~~~~l~d~-~g~i~~~~~~~~~~------~~~~~~~~~~~~i~~~i~----~-~---~~~------~~~ 61 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC-EGNFIGEGSSGPGN------YHNVGLTRAIENIKEAVK----I-A---AKG------EAD 61 (299)
T ss_dssp CEEEEEECSSCEEEEEECT-TSCEEEEEEESCCC------HHHHCHHHHHHHHHHHHH----H-H---HTS------CCS
T ss_pred EEEEEEeCCCcEEEEEEcC-CCCEEEEEeCCCCC------cccCCHHHHHHHHHHHHH----H-H---Hhc------CCC
Confidence 8999999999999999997 89999887666531 123578999999999888 6 4 221 166
Q ss_pred EEEEcCccceEEEEeCCCCc-c-------c-cccccccccCCHHHHH
Q psy9351 91 AVGVTNQRESTIAWDKITGE-P-------L-YNSIVWLDARTTSTLE 128 (297)
Q Consensus 91 ~Igis~~~~~~v~vd~~~g~-~-------~-~~~i~w~D~R~~~~~~ 128 (297)
+||++.+| + |.+++. + + .|++.++|.++....+
T Consensus 62 ~igi~~~G----~-~~~~~~~~l~~~l~~~~~pv~v~ND~~aaa~~e 103 (299)
T 2e2o_A 62 VVGMGVAG----L-DSKFDWENFTPLASLIAPKVIIQHDGVIALFAE 103 (299)
T ss_dssp EEEEEETT----C-CSHHHHHHHHHHHTTSSSEEEEEEHHHHHHHHH
T ss_pred EEEEEcCC----C-CchhHHHHHHHHHHhCCCCEEEeCcHHHHHhhc
Confidence 78888777 4 431111 0 1 2455677777665544
No 41
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=97.85 E-value=1.9e-05 Score=68.32 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=53.3
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPT 87 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~ 87 (297)
++.++++||||+|++| ++|. +|++ ..+.+++. ..+++++.+.+.+.++ + .
T Consensus 4 ~~~~~lgiDIGGT~i~--~~d~-~g~~--~~~~~t~~--------~~~~~~~~~~i~~~i~----~-------------~ 53 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVK--IGLS-TDGE--ERKVESGK--------TMTGPEMVAAVTAMAK----D-------------M 53 (226)
T ss_dssp GGCCEEEEEECSSEEE--EEET-TTCC--EEEEECCT--------TCCHHHHHHHHHHHTT----T-------------C
T ss_pred cCCEEEEEEECCCEEE--EEEC-CCCE--EEEEECCC--------CCCHHHHHHHHHHHHH----h-------------C
Confidence 3458999999999999 5786 7876 33445431 2356666655544333 2 2
Q ss_pred CeeEEEEcCccceEEEEeCCCCcccc-ccc--cccccC
Q psy9351 88 DIVAVGVTNQRESTIAWDKITGEPLY-NSI--VWLDAR 122 (297)
Q Consensus 88 ~I~~Igis~~~~~~v~vd~~~g~~~~-~~i--~w~D~R 122 (297)
++.+||++.+| ++|. ++..+. |.+ .|.+..
T Consensus 54 ~i~gigi~~pG----~Vd~-~~~~~~~~nl~~~w~~~~ 86 (226)
T 3lm2_A 54 TYDVIAMGYPG----PVVH-NKPLREPVNLGEGWVGYD 86 (226)
T ss_dssp CCSEEEEEESS----CEET-TEECSCCTTSCSCCTTCC
T ss_pred CCCEEEEEEEe----EEEC-CeEEEECCcCCccccCCc
Confidence 68999999988 8898 565553 355 588754
No 42
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.71 E-value=5.5e-05 Score=68.85 Aligned_cols=79 Identities=11% Similarity=0.086 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
+.|+||||||+|++|++++|.++|+++...+.++.. .+. +.+.++ + + +++.+ .+
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~~-----------~~~----~~~~i~----~-~---~~~~~---~~ 66 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYSGLD-----------YPS----LEAVIR----V-Y---LEEHK---VE 66 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----------CSC----HHHHHH----H-H---HHHSC---CC
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEEEEEecCCC-----------cCC----HHHHHH----H-H---HHhcC---CC
Confidence 458999999999999999994269888765555421 111 223344 3 3 22222 36
Q ss_pred eeEEEEcCccceEEEEeCCCCcccccccccc
Q psy9351 89 IVAVGVTNQRESTIAWDKITGEPLYNSIVWL 119 (297)
Q Consensus 89 I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~ 119 (297)
+.+|||+.+| ++|. +....+.+.|.
T Consensus 67 i~gigi~~pG----~vd~--~~~~~~nl~w~ 91 (332)
T 1sz2_A 67 VKDGCIAIAC----PITG--DWVAMTNHTWA 91 (332)
T ss_dssp CCEEEEEESS----CCCS--SEECCSSSCCC
T ss_pred ccEEEEEEeC----ceeC--CEEeeeCCCCc
Confidence 8999999988 7775 44445666786
No 43
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.56 E-value=9.7e-05 Score=68.31 Aligned_cols=85 Identities=16% Similarity=0.010 Sum_probs=58.4
Q ss_pred CCEEEEEecCCCcceEEEEeCC---CCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSAL---TGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~---~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
++++||||+|+|++|++++|.. +|+++...+. .+ . .+++++.+.+.+.++ + +. .+ .
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~----~-----~~~~~~~~~i~~~i~----~-~~---~~---~ 86 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MK----R-----KDITEIIEFFNEIIE----L-MP---AS---V 86 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CT----T-----CBGGGHHHHHHHHHH----H-SC---HH---H
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeee-cC----C-----CCHHHHHHHHHHHHH----H-Hh---hc---c
Confidence 4589999999999999999941 5888876541 11 1 246667777777776 4 21 11 1
Q ss_pred CCCeeEEEEcCccceEEEEeCCCCccccccccccc
Q psy9351 86 PTDIVAVGVTNQRESTIAWDKITGEPLYNSIVWLD 120 (297)
Q Consensus 86 ~~~I~~Igis~~~~~~v~vd~~~g~~~~~~i~w~D 120 (297)
+.++.+|||+.+| ++|. |....|...|.+
T Consensus 87 ~~~i~gigi~~pG----~vd~--g~v~~~~~~~~~ 115 (373)
T 2q2r_A 87 MKRVKAGVINVPG----PVTG--GAVGGPFNNLKG 115 (373)
T ss_dssp HTTEEEEEEEESS----CEET--TTEECCCSSSBS
T ss_pred cccccEEEEEeec----cccC--CEEeccCCCCCC
Confidence 3468999999988 7787 555544445665
No 44
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.55 E-value=4.7e-05 Score=70.87 Aligned_cols=81 Identities=19% Similarity=0.237 Sum_probs=53.1
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHH---HHHHHhhhhHHHHHHHHHcCCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVV---NGTIEACQFSACVEKLKEQGIEP 86 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i---~~~i~~~~~~~~~~~l~~~~~~~ 86 (297)
+++|+||+|+|++|++++|. + +++.+.+.+++.... .+++++.+.+ .+.+. + + +++.+...
T Consensus 2 ~~vlgidiGgt~ik~al~d~-~-~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~----~-~---l~~~~~~~ 65 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED-E-RMVKMQNFSHSPDEL------GRFQKILDQLEFREKIAR----Q-F---VEETGYSL 65 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET-T-EEEEEEEEECCHHHH------HTCSSGGGGHHHHHHHHH----H-H---HHTTTCCG
T ss_pred CeEEEEECCccceeEEEEec-c-hheeeeecccCcccc------cchhhHHHHHHHHHHHHH----H-H---HHHcCCCc
Confidence 37899999999999999996 6 898888777742100 0111223333 44444 3 3 44455555
Q ss_pred CCeeEEEEcCccceEEEEeCCCCcc
Q psy9351 87 TDIVAVGVTNQRESTIAWDKITGEP 111 (297)
Q Consensus 87 ~~I~~Igis~~~~~~v~vd~~~g~~ 111 (297)
.+|.+| ++.+| ++|..+|..
T Consensus 66 ~~i~gI-i~~pG----~vd~~~G~~ 85 (381)
T 1saz_A 66 SSFSAF-VSRGG----LLDPIPGGV 85 (381)
T ss_dssp GGCSEE-EEECC----SCSCBCSSE
T ss_pred cCceEE-EecCC----CCCCCCCce
Confidence 689999 88887 778645665
No 45
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=97.51 E-value=0.00025 Score=62.76 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=47.2
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCeeE
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIVA 91 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~~ 91 (297)
+|+||+|.|++|.++|| +++++...+.+++ . ...+++...+.+.++ +.+.++++|.+
T Consensus 4 lL~IDIGNT~iK~gl~d--~~~l~~~~r~~T~-~--------~t~de~~~~l~~ll~------------~~~~~~~~I~~ 60 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD--GDEIKLRFRHTSK-V--------STSDELGIFLKSVLR------------ENNCSPETIRK 60 (266)
T ss_dssp EEEEEECSSEEEEEEEE--TTEEEEEEEEECS-C--------CCHHHHHHHHHHHHH------------TTTCCGGGCCE
T ss_pred EEEEEECCCeEEEEEEE--CCEEEEEEEecCC-C--------CCHHHHHHHHHHHHH------------HcCCChhhceE
Confidence 69999999999999999 3788888777774 2 346665544444333 34556778999
Q ss_pred EEEcCcc
Q psy9351 92 VGVTNQR 98 (297)
Q Consensus 92 Igis~~~ 98 (297)
|++|+..
T Consensus 61 iiISSVv 67 (266)
T 3djc_A 61 IAICSVV 67 (266)
T ss_dssp EEEEESC
T ss_pred EEEecch
Confidence 9999864
No 46
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.49 E-value=0.00012 Score=65.26 Aligned_cols=68 Identities=21% Similarity=0.225 Sum_probs=49.5
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCeeE
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIVA 91 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~~ 91 (297)
+||||+|+|++|++++| +|+++.+.+.+.... ...+++++++.+.+.++ + + + +.+..++.+
T Consensus 2 ~lgiDiGGT~~~~~l~d--~g~il~~~~~~~~~~------~~~~~~~~~~~i~~~i~----~-~---~---~~~~~~i~~ 62 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK--EGKSLGRFQTSGINP------FQQDRNEIDTALRSEVL----P-A---I---GQKASSIRA 62 (291)
T ss_dssp EEEEEECSSEEEEEEEE--TTEEEEEEEEECCCT------TTSCHHHHHHHHTTTTH----H-H---H---TTSTTTCCE
T ss_pred EEEEEeCccceEEEEEe--CCeEEEEEECCCCCc------ccCCHHHHHHHHHHHHH----H-H---h---CCCcccccE
Confidence 79999999999999999 599998776644210 11357788877777776 4 2 1 234567889
Q ss_pred EEEcCcc
Q psy9351 92 VGVTNQR 98 (297)
Q Consensus 92 Igis~~~ 98 (297)
||++.+|
T Consensus 63 igig~pG 69 (291)
T 1zbs_A 63 VYFYGAG 69 (291)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9999987
No 47
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=97.43 E-value=0.00037 Score=66.28 Aligned_cols=78 Identities=14% Similarity=0.205 Sum_probs=51.5
Q ss_pred CEEEEEecCCCcceEEEEeCCCC-eE---EEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTG-KL---VAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g-~v---~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
..+||||+|+|++|+++++. +| +- +...+.+.|... ...+.+++++.+.++++ + + +++.+..
T Consensus 68 G~~lalDlGGTn~Rv~~V~l-~G~~~~~~i~~~~~~ip~~~-----~~~~~~~lfd~Ia~~i~----~-~---l~~~~~~ 133 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTL-EGKGKSPRIQERTYCIPAEK-----MSGSGTELFKYIAETLA----D-F---LENNGMK 133 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEE-CC-CCCCEEEEEEECCCTTT-----TTSBHHHHHHHHHHHHH----H-H---HHHTTCC
T ss_pred ceEEEEEeCCCeEEEEEEec-CCCCcceEEEEEEEecCCcc-----cCCCHHHHHHHHHHHHH----H-H---HHhcCCC
Confidence 46899999999999999998 78 51 112233333111 12357899999999998 7 5 4555543
Q ss_pred CCCeeEEEEcCccceEEEEeC
Q psy9351 86 PTDIVAVGVTNQRESTIAWDK 106 (297)
Q Consensus 86 ~~~I~~Igis~~~~~~v~vd~ 106 (297)
.+ ...+|++... ++|.
T Consensus 134 ~~-~~~lG~tfsf----Pv~q 149 (451)
T 1bdg_A 134 DK-KFDLGFTFSF----PCVQ 149 (451)
T ss_dssp SS-CEEEEEEECS----CEEE
T ss_pred cc-ccceEEEEee----Eecc
Confidence 33 3667777766 6664
No 48
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=97.34 E-value=0.00039 Score=66.17 Aligned_cols=75 Identities=9% Similarity=0.009 Sum_probs=51.4
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeE---EEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKL---VAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEP 86 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v---~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~ 86 (297)
..+||||+|+|++|++++|. +|++ +...+.+++... ...+.+++++.+.++++ + + +++.+...
T Consensus 61 G~~laiDlGGTnirv~lV~~-~G~~~~~~~~~~~~ip~~~-----~~~~~~~lfd~Ia~~i~----~-~---~~~~~~~~ 126 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISL-AGRQESSIXASRSLAAAMS-----TTAIPSDLWGNXAXSNA----A-F---SSXEFSSX 126 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCTTTT-----SCSCTHHHHHHHHHHHH----H-H---HHHHTSSC
T ss_pred ceEEEEEeCCCeEEEEEEEe-CCCeeEEEeeEEEEcCCcc-----CCCCHHHHHHHHHHHHH----H-H---Hhhccccc
Confidence 35799999999999999997 8988 555555554110 12267899999999998 6 5 34333221
Q ss_pred --CCeeEEEEcCcc
Q psy9351 87 --TDIVAVGVTNQR 98 (297)
Q Consensus 87 --~~I~~Igis~~~ 98 (297)
..+.||+++.++
T Consensus 127 ~~~~~lGi~fs~P~ 140 (457)
T 2yhx_A 127 AGSVPLGFTFXEAG 140 (457)
T ss_dssp SSCEEEEEECCSCC
T ss_pred ccccceeeEEEEEE
Confidence 225677777766
No 49
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.33 E-value=0.00055 Score=60.33 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=25.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQIS 41 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~ 41 (297)
|+||||+|||++|++++|. +++++.....+
T Consensus 2 ~~lGID~GsT~tk~av~d~-~~~il~~~~~~ 31 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN-GEDIVASETIS 31 (276)
T ss_dssp EEEEEEECSSCEEEEEEET-TTEEEEEEEES
T ss_pred eEEEEEcCccEEEEEEEEC-CCeEEEEEEec
Confidence 8999999999999999996 89888765443
No 50
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=97.28 E-value=0.00083 Score=69.26 Aligned_cols=85 Identities=12% Similarity=0.084 Sum_probs=56.1
Q ss_pred CEEEEEecCCCcceEEEEeCCCCe----E-EEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGK----L-VAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGI 84 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~----v-~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~ 84 (297)
..+||||+|+|++|++++|. +|+ + +...+.+++... .+.+.+++++.|.++++ + + +++.+.
T Consensus 78 G~~laiDlGGTnirv~lv~~-~G~~~~~i~~~~~~~~ip~~~-----~~~~~~~lf~~Ia~~i~----~-~---l~~~~~ 143 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQV-NHEKNQNVHMESEVYDTPENI-----VHGSGSQLFDHVAECLG----D-F---MEKRKI 143 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEE-EEETTEEEEEEEEEECCCHHH-----HSSBHHHHHHHHHHHHH----H-H---HHHHTC
T ss_pred ceEEEEEeCCCeEEEEEEEe-cCCCcceEEEEEEEEECCccc-----ccCCHHHHHHHHHHHHH----H-H---HHhcCC
Confidence 46799999999999999997 776 5 555566664210 11357899999999998 6 5 344443
Q ss_pred CCCC-eeEEEEcCccceEEEE-eCCCCccc
Q psy9351 85 EPTD-IVAVGVTNQRESTIAW-DKITGEPL 112 (297)
Q Consensus 85 ~~~~-I~~Igis~~~~~~v~v-d~~~g~~~ 112 (297)
..+. ..||+++.+. .. +.++|..+
T Consensus 144 ~~~~~~lGi~fs~P~----~q~~~~~G~l~ 169 (917)
T 1cza_N 144 KDKKLPVGFTFSFPC----QQSKIDEAILI 169 (917)
T ss_dssp TTSCCCEEEEECSCE----ECSSTTCCEEC
T ss_pred CCCcccEEEEEcccc----ccCcCCceEEE
Confidence 3222 5677777754 22 23357666
No 51
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=97.07 E-value=0.0018 Score=63.69 Aligned_cols=84 Identities=23% Similarity=0.267 Sum_probs=58.3
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCC------eeE---eCHHHHHHHHHHHHHhhhhHHHHHH-
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEG------WVE---QDPMEILAVVNGTIEACQFSACVEK- 78 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g------~~e---~d~~~~~~~i~~~i~~~~~~~~~~~- 78 (297)
..|-++||||||++.+.++|..+|++++..+.-++......+ ++. ...+++-+.+.+.+. + ++++
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in----~-li~~l 279 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTIN----E-LIFQL 279 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHH----H-HHHHH
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHH----H-HHHHH
Confidence 457899999999999999999899999999888876432221 221 122344444555555 4 3222
Q ss_pred HHHcCCCCCCeeEEEEcCc
Q psy9351 79 LKEQGIEPTDIVAVGVTNQ 97 (297)
Q Consensus 79 l~~~~~~~~~I~~Igis~~ 97 (297)
.+++++++++|..+.+++.
T Consensus 280 ~~~~~i~~~~I~~~~v~GN 298 (631)
T 3zyy_X 280 CKEHGVEKKEIMAAVVAGN 298 (631)
T ss_dssp HHHHTCCGGGEEEEEEEEC
T ss_pred HHHcCCCHHHeeEEEEEcc
Confidence 3467899999999888773
No 52
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.93 E-value=0.00012 Score=65.45 Aligned_cols=67 Identities=16% Similarity=0.146 Sum_probs=36.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
++||||+|+|++|++++| +|+++.+.+.+... +. ..+++++++.+.+.++ + + + +..++.
T Consensus 1 ~~lgiDiGGT~i~~~l~d--~g~il~~~~~~~~~--~~----~~~~~~~~~~i~~~i~----~-~---~-----~~~~i~ 59 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL--NGAVIKRLGTKGIN--PF----FQSEEEIQQKLTASLL----P-Q---L-----PEGKFN 59 (291)
T ss_dssp ---CEECCTTCEEEEEEC--SSSEEEEEEECCCC--TT----TSCSTTTTTTTTC-------------------------
T ss_pred CEEEEEeccccEEEEEEc--CCeEEEEEECCCCC--cc----cCCHHHHHHHHHHHHH----H-h---c-----Cccccc
Confidence 379999999999999999 59999876654421 10 1234555666666665 4 3 1 234688
Q ss_pred EEEEcCcc
Q psy9351 91 AVGVTNQR 98 (297)
Q Consensus 91 ~Igis~~~ 98 (297)
+||++.+|
T Consensus 60 ~igig~pG 67 (291)
T 1zxo_A 60 AVYFYGAG 67 (291)
T ss_dssp -CEEECTT
T ss_pred EEEEEcCC
Confidence 89999987
No 53
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=96.84 E-value=0.0035 Score=59.88 Aligned_cols=74 Identities=12% Similarity=0.181 Sum_probs=45.9
Q ss_pred EEEEEecCCCcceEEEEeCCCCeE---EEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC-
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKL---VAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEP- 86 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v---~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~- 86 (297)
.+|+||+|+|++|+++++. +|+- +...+.++|... ..-+.+++++.+.++|. + . +++.....
T Consensus 81 ~~LalDlGGTn~Rv~~V~l-~g~~~~~~~~~~~~Ip~~~-----~~~~~~~lfd~Ia~~i~----~-f---l~~~~~~~~ 146 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKL-GGNHDFDTTQNKYRLPDHL-----RTGTSEQLWSFIAKCLK----E-F---VDEWYPDGV 146 (485)
T ss_dssp EEEEEEESSSEEEEEEEEE-ESSSCEEEEEEEEECCTTG-----GGSBHHHHHHHHHHHHH----H-H---HHHHCTTCC
T ss_pred EEEEEEecCCeEEEEEEEE-CCCCceEEEEEEEecCchh-----ccCCHHHHHHHHHHHHH----H-H---HHHhccccc
Confidence 6899999999999999998 6651 112223332111 11236899999999998 6 5 44443221
Q ss_pred CCeeEEEEcCcc
Q psy9351 87 TDIVAVGVTNQR 98 (297)
Q Consensus 87 ~~I~~Igis~~~ 98 (297)
.+...+|++...
T Consensus 147 ~~~l~lGftfSf 158 (485)
T 3o8m_A 147 SEPLPLGFTFSY 158 (485)
T ss_dssp SSCEEEEEEECS
T ss_pred ccccceEEEEee
Confidence 344455555544
No 54
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.83 E-value=0.0019 Score=66.55 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=51.0
Q ss_pred CEEEEEecCCCcceEEEEeCCCCe--EEEEEE--eeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGK--LVAKHQ--ISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~--v~~~~~--~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
..+||||+|+|++|+++++...|+ ++...+ .+.|... ..-+.+++++.+.++|+ + + +++.+..
T Consensus 526 G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~~-----~~~~~~~lfd~Ia~~i~----~-~---l~~~~~~ 592 (917)
T 1cza_N 526 GDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEI-----MQGTGEELFDHIVSCIS----D-F---LDYMGIK 592 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHHH-----HTSBHHHHHHHHHHHHH----H-H---HHHHTCC
T ss_pred eEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCccc-----ccCCHHHHHHHHHHHHH----H-H---HHHcCCC
Confidence 467999999999999999972254 553322 2222110 11246889999999998 7 5 4445544
Q ss_pred CCCeeEEEEcCccceEEEEeC
Q psy9351 86 PTDIVAVGVTNQRESTIAWDK 106 (297)
Q Consensus 86 ~~~I~~Igis~~~~~~v~vd~ 106 (297)
.+.+ .+|++... ++|.
T Consensus 593 ~~~l-~lG~tfsf----Pv~q 608 (917)
T 1cza_N 593 GPRM-PLGFTFSF----PCQQ 608 (917)
T ss_dssp SSCC-EEEEEECS----CEEE
T ss_pred ccce-eEEEEeec----cccc
Confidence 4444 67777665 5664
No 55
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=96.76 E-value=0.0018 Score=56.64 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=43.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
.+|+||+|.|++|.++|| +++++...+.+++. ....+++...+.+.++ . ...+|.
T Consensus 4 M~L~IDIGNT~ik~gl~~--~~~l~~~~r~~T~~--------~~t~de~~~~l~~l~~----~-----------~~~~i~ 58 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE--DGKTFRRWRLSTGV--------FQTEDELFSHLHPLLG----D-----------AMREIK 58 (249)
T ss_dssp EEEEEEECSSEEEEEEES--SSSSCEEEEEECCT--------TCCHHHHHHHHHHHHG----G-----------GGGGEE
T ss_pred eEEEEEECCCeEEEEEEE--CCEEEEEEEecCCC--------CCCHHHHHHHHHHHHh----h-----------ccccCC
Confidence 469999999999999999 46777777776652 2446777655555443 1 235688
Q ss_pred EEEEcCc
Q psy9351 91 AVGVTNQ 97 (297)
Q Consensus 91 ~Igis~~ 97 (297)
+|.+|+.
T Consensus 59 ~i~IsSV 65 (249)
T 3bex_A 59 GIGVASV 65 (249)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 8888874
No 56
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=96.69 E-value=0.004 Score=54.97 Aligned_cols=64 Identities=19% Similarity=0.299 Sum_probs=45.9
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCeeE
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIVA 91 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~~ 91 (297)
+|.||+|.|++|.++|| +++++...+.+++. ....+++...+.+.++ ..++++.+|.+
T Consensus 2 lL~IDIGNT~ik~gl~~--~~~l~~~~r~~T~~--------~~t~de~~~~l~~ll~------------~~~~~~~~i~~ 59 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EGELRQHWRMETDR--------HKTEDEYGMLVKQLLE------------HEGLSFEDVKG 59 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TTEEEEEEEEECCT--------TCCHHHHHHHHHHHHH------------HTTCCGGGCCE
T ss_pred EEEEEECcCcEEEEEEE--CCEEEEEEEecCCC--------cCCHHHHHHHHHHHHH------------HcCCCcccCcE
Confidence 58899999999999999 47888877777642 2346676665555444 24556677888
Q ss_pred EEEcCc
Q psy9351 92 VGVTNQ 97 (297)
Q Consensus 92 Igis~~ 97 (297)
|.+|+.
T Consensus 60 iiISSV 65 (268)
T 2h3g_X 60 IIVSSV 65 (268)
T ss_dssp EEEEES
T ss_pred EEEEcc
Confidence 888763
No 57
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=96.64 E-value=0.0091 Score=52.04 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=40.9
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHH
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIE 68 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~ 68 (297)
.+++++|||+||+++|++++|. +++++.....+.... .+| ...|.+...+.+..+++
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~~-~~~~l~~~~~~~~~l--~~g-~i~d~~~~~~~l~~~~~ 82 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTDQ-EGIPVAGALKWASVV--KDG-LVVDYIGAIQIVRELKA 82 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEECT-TCCEEEEEEEECCCC--BTT-BCTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcccceEEEEEECC-CCcEEEEEeeccccc--CCC-EEEcHHHHHHHHHHHHH
Confidence 4568999999999999999996 889988776665422 223 33466666666666655
No 58
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.18 E-value=0.029 Score=52.62 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=50.9
Q ss_pred CCEEEEEecCCCcceEEEEeCC-CC-eEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSAL-TG-KLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEP 86 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~-~g-~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~ 86 (297)
.++++||||||+++|+++.... ++ ++++....|..-. .+|.. .|.+...+++.++++ + + + +.++.+.
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv--~~G~I-~di~~~~~~I~~av~----~-a-e--~~~g~~i 75 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGL--DEGEI-KDAIAFKESVNTLLK----E-L-E--EQLQKSL 75 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSE--ETTEE-SBHHHHHHHHHHHHH----H-H-H--HHHTSCC
T ss_pred CCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCe--eCCEE-EcHHHHHHHHHHHHH----H-H-H--HHcCCCc
Confidence 5689999999999999999852 13 7887776664321 33433 688998888888887 5 3 2 1245544
Q ss_pred CCeeEEEEcCc
Q psy9351 87 TDIVAVGVTNQ 97 (297)
Q Consensus 87 ~~I~~Igis~~ 97 (297)
++=..+++++.
T Consensus 76 ~~~v~v~i~g~ 86 (419)
T 4a2a_A 76 RSDFVISFSSV 86 (419)
T ss_dssp CSEEEEEECCT
T ss_pred CceEEEEEcCC
Confidence 44134566664
No 59
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=94.63 E-value=0.092 Score=47.47 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=47.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeE-eCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCe
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVE-QDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDI 89 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e-~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I 89 (297)
++||||.++..+++++++ ++++++....+.. .+..|... .....-.+.+..+++ + + ++++++++++|
T Consensus 2 ~iLgIdts~~~~~val~~--~g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~----~-~---L~~agi~~~di 69 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVS--EDKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLR----K-A---LSEAGVSLDDI 69 (330)
T ss_dssp CEEEEECSSSEEEEEEEC--SSCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHH----H-H---HHHHTCCTTTC
T ss_pred EEEEEEccCCCeEEEEEE--CCEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHH----H-H---HHHcCCCHHHC
Confidence 589999999999999998 4688865544432 22223221 111223344555666 4 4 56678899999
Q ss_pred eEEEEc
Q psy9351 90 VAVGVT 95 (297)
Q Consensus 90 ~~Igis 95 (297)
.+|+++
T Consensus 70 d~Ia~~ 75 (330)
T 2ivn_A 70 DVIAFS 75 (330)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 999875
No 60
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.56 E-value=0.17 Score=46.13 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=37.7
Q ss_pred CCEEEEEecCCCcceEEEEeCCCC-eEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHH
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTG-KLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIE 68 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g-~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~ 68 (297)
.+.++||||||+++|++++.. +. ++......++|..--.+|.. .|++.+...+.++++
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~~-~~~~i~~~g~~~~ps~~~~~g~i-~d~~~~~~~ik~~~~ 70 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVSG-NPPALKALASRPTPPGLLMEGMV-AEPAALAQEIKELLL 70 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEET-TTTEEEEEEEEECCTTSEETTEE-SCHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCeEEEEEEeC-CceEEEEEEeEECCCCcccCCCc-CCHHHHHHHHHHHHH
Confidence 346899999999999999973 32 35555556655322233433 578777766666555
No 61
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=94.25 E-value=0.14 Score=48.24 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=46.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEE-EEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC-CCC
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLV-AKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE-PTD 88 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~-~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~-~~~ 88 (297)
.+|+||+|+|+.|+++++. .|.+. .+...++|.... . -..+++++.+.++|. + . +++.+.. ..-
T Consensus 60 ~~LAlDlGGTn~RV~~V~l-~g~~~~~~~~~~ip~~~~-~----g~~~~LFd~Ia~~i~----~-f---l~~~~~~~~~l 125 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRV-TTGVQITSEIYSIPETVA-Q----GSGQQLFDHIVDCIV----D-F---QQKQGLSGQSL 125 (445)
T ss_dssp EEEEEEESSSSEEEEEEEE-SSSEEEEEEEECCCHHHH-T----SBHHHHHHHHHHHHH----H-H---HHHHTCTTCCC
T ss_pred EEEEEEecCCeEEEEEEEE-CCceEEEEEEeccCcccc-C----CCHHHHHHHHHHHHH----H-H---HHHhCcccccC
Confidence 6799999999999999998 66532 122223332110 1 146889999999998 6 5 3443332 233
Q ss_pred eeEEEEcCcc
Q psy9351 89 IVAVGVTNQR 98 (297)
Q Consensus 89 I~~Igis~~~ 98 (297)
..|+.+|.+.
T Consensus 126 plGftFSFP~ 135 (445)
T 3hm8_A 126 PLGFTFSFPC 135 (445)
T ss_dssp CEEEEECSCE
T ss_pred cceEEEeeee
Confidence 4667777653
No 62
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=93.78 E-value=0.16 Score=48.23 Aligned_cols=76 Identities=9% Similarity=0.111 Sum_probs=46.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCe-----EEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGK-----LVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~-----v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
.+|+||+|+|+.|+++++. .|. .+...+..++ .|+. ...-..+++|+.|.++|. + + +++.+..
T Consensus 78 ~fLAlDlGGTNfRV~~V~L-~g~~~~~~~~~~~~~~~~--Ip~~-l~~gt~~eLFd~IA~~i~----~-f---l~~~~~~ 145 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKV-GEGEEGQWSVKTKHQMYS--IPED-AMTGTAEMLFDYISECIS----D-F---LDKHQMK 145 (470)
T ss_dssp EEEEEEESSSEEEEEEEEE-EC----CEEEEEEEEEEE--CCHH-HHSSBHHHHHHHHHHHHH----H-H---HHHTTCS
T ss_pred EEEEEEecCceEEEEEEEE-CCCCCCcceEEEEEEeec--CChH-hccCCHHHHHHHHHHHHH----H-H---Hhhcccc
Confidence 5799999999999999997 543 2332222222 1111 011246899999999998 7 5 4555433
Q ss_pred C-CCeeEEEEcCcc
Q psy9351 86 P-TDIVAVGVTNQR 98 (297)
Q Consensus 86 ~-~~I~~Igis~~~ 98 (297)
. .-..|+.+|.+.
T Consensus 146 ~~~lpLGfTFSFP~ 159 (470)
T 3f9m_A 146 HKKLPLGFTFSFPV 159 (470)
T ss_dssp SSCCEEEEEECSCE
T ss_pred ccccceEEEEeccc
Confidence 2 234666666653
No 63
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=93.46 E-value=0.21 Score=44.79 Aligned_cols=81 Identities=17% Similarity=0.308 Sum_probs=48.3
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCe--EEEEEEeeeccccC--CCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcC
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGK--LVAKHQISLGQTFP--TEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQG 83 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~--v~~~~~~~~~~~~~--~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~ 83 (297)
|.+.+.+||+||.++|..+++..++. ++...+.++.+-.. ..|. .+++. .+...++++ + ..+.+++.+
T Consensus 2 m~~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~--ls~ea-i~r~~~~L~----~-f~~~~~~~~ 73 (315)
T 3mdq_A 2 MSQRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGF--ITEEA-MDRALDTLK----K-FRVILDEHA 73 (315)
T ss_dssp --CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTC--CCHHH-HHHHHHHHH----H-HHHHHHHTT
T ss_pred CCceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCC--cCHHH-HHHHHHHHH----H-HHHHHHHcC
Confidence 45568999999999999999973343 34444444432211 1222 33333 445556666 4 444455555
Q ss_pred CCCCCeeEEEEcCcc
Q psy9351 84 IEPTDIVAVGVTNQR 98 (297)
Q Consensus 84 ~~~~~I~~Igis~~~ 98 (297)
.++|.+++-++.+
T Consensus 74 --v~~v~~vATsA~R 86 (315)
T 3mdq_A 74 --VVHVIATGTSAVR 86 (315)
T ss_dssp --CCEEEEEECHHHH
T ss_pred --CCEEEEEeeHHHH
Confidence 4678888888866
No 64
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=92.88 E-value=0.16 Score=45.59 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=45.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCe--EEEEEEeeeccccCCCCe---eEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGK--LVAKHQISLGQTFPTEGW---VEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~--v~~~~~~~~~~~~~~~g~---~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
.+.+||+||.++|..+++..++. ++...+.+..+ ..|- ...++ +-.+...++++ + +.+.+++.+
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrL---g~g~~~~g~ls~-eai~r~~~~L~----~-f~~~~~~~~-- 81 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSL---GTKVKETGRLQE-DRIEETIQVLK----E-YKKLIDEFK-- 81 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCT---TTTHHHHSSCCH-HHHHHHHHHHH----H-HHHHHHHTT--
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeec---CCCccccCCcCH-HHHHHHHHHHH----H-HHHHHHHCC--
Confidence 57899999999999999974453 33444444332 1121 11233 33444556666 4 444455544
Q ss_pred CCCeeEEEEcCcc
Q psy9351 86 PTDIVAVGVTNQR 98 (297)
Q Consensus 86 ~~~I~~Igis~~~ 98 (297)
.++|.+++-++.+
T Consensus 82 v~~i~~vATsA~R 94 (315)
T 1t6c_A 82 VERVKAVATEAIR 94 (315)
T ss_dssp CSEEEEEECHHHH
T ss_pred CCeEEEEEcHHHH
Confidence 4678888877766
No 65
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=90.79 E-value=0.62 Score=42.95 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=25.9
Q ss_pred cccccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEee
Q psy9351 4 IKGQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQIS 41 (297)
Q Consensus 4 ~~~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~ 41 (297)
..++|+ +|.|..|+||+|..|||..+.+++++...+
T Consensus 8 ~~~~M~--iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 43 (391)
T 3r9p_A 8 SDGARR--VLVINSGSSSLKFQLVDPEFGVAASTGIVE 43 (391)
T ss_dssp ----CE--EEEEEECSSCEEEEEEETTTTEEEEEEEEC
T ss_pred ccCCce--EEEEecCchhheeEEEecCCCceEEEEEEe
Confidence 344553 799999999999999997567777766544
No 66
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=90.68 E-value=0.31 Score=43.32 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=31.1
Q ss_pred cccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeecc
Q psy9351 6 GQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQ 44 (297)
Q Consensus 6 ~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~ 44 (297)
..|++++|+||-||||+|+-++| +|+++++.+.+...
T Consensus 2 ~~m~~~~IavDWGTs~lRa~l~~--~g~vl~~~~~~~Gv 38 (295)
T 3nuw_A 2 NAMTARYIAIDWGSTNLRAWLYQ--GEECLESRQSEAGV 38 (295)
T ss_dssp CGGGCEEEEEEECSSCEEEEEEE--TTEEEEEEEESCCT
T ss_pred CCCCccEEEEEecchheeeeeec--CCceehhhcCCCch
Confidence 35778899999999999999999 58999987766653
No 67
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=90.51 E-value=0.74 Score=42.54 Aligned_cols=35 Identities=26% Similarity=0.412 Sum_probs=24.7
Q ss_pred ccccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEe
Q psy9351 5 KGQYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 5 ~~~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~ 40 (297)
.+.|+ .+|+|..|+||+|..|||.++.+++.+...
T Consensus 19 ~~~m~-~ILviN~GSSS~K~~l~~~~~~~~l~~g~~ 53 (398)
T 4ijn_A 19 PGSMV-TVLVVNSGSSSLKYAVVRPASGEFLADGII 53 (398)
T ss_dssp ---CC-EEEEEEECSSCEEEEEECTTTCCEEEEEEE
T ss_pred ccccc-cEEEEeCCchhheEEEEECCCCceeeeeee
Confidence 34444 479999999999999999745556666543
No 68
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=90.50 E-value=0.24 Score=44.76 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=28.1
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeeec
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLG 43 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~ 43 (297)
|++++|+||-||||+|+-++|. +|+++++.+.+..
T Consensus 5 ~~~~~IavDWGTSnlRa~l~~~-~g~vl~~~~~~~G 39 (330)
T 3t69_A 5 TAGYYAAVDWGTSSFRLWIIGE-DGAVLAERRSAEG 39 (330)
T ss_dssp ---CEEEEEECSSCEEEEEECT-TSCEEEEEEESCC
T ss_pred CCCCEEEEEecchheehheecC-CCCchhhhcCCcc
Confidence 4567899999999999999997 8999997766554
No 69
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.46 E-value=0.58 Score=42.28 Aligned_cols=75 Identities=15% Similarity=0.163 Sum_probs=49.0
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEe-CHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQ-DPMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~-d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
+++||||-.+..+-++|++ ++++++....... .+..|.... ....-.+.+..+++ + + +++++++.++
T Consensus 6 M~iLgIdts~~~~svAl~~--~~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~----~-~---L~~ag~~~~d 73 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIID--ESRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVIS----R-A---LEKAKISIHD 73 (334)
T ss_dssp CEEEEEECSSSEEEEEEEE--SSCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHH----H-H---HHHHTCCGGG
T ss_pred ceEEEEECCCcCeEEEEEE--CCEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHH----H-H---HHHcCCCHHH
Confidence 4799999999899999999 4678775444332 122332211 11223345566666 4 4 5668899999
Q ss_pred eeEEEEcC
Q psy9351 89 IVAVGVTN 96 (297)
Q Consensus 89 I~~Igis~ 96 (297)
|.+|+++.
T Consensus 74 id~Iav~~ 81 (334)
T 3eno_A 74 IDLIGFSM 81 (334)
T ss_dssp CCEEEEEC
T ss_pred CCEEEEEc
Confidence 99998875
No 70
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=90.12 E-value=0.49 Score=45.37 Aligned_cols=78 Identities=14% Similarity=0.262 Sum_probs=47.2
Q ss_pred EEEEEecCCCcceEEEEeCCCC--eEEEEEEeeecccc--CCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTG--KLVAKHQISLGQTF--PTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEP 86 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g--~v~~~~~~~~~~~~--~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~ 86 (297)
.+.+|||||.++|..+++..++ +++...+.++.+-. ...|. .+++ -.+...++++ . ..+.+++ ...
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e-ai~r~~~~L~----~-f~~~~~~--~~v 81 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNM--LSEE-AMTRGLNCLS----L-FAERLQG--FSP 81 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCC--BCHH-HHHHHHHHHH----H-HHHHTTT--CCG
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCC--cCHH-HHHHHHHHHH----H-HHHHHHh--CCC
Confidence 5799999999999999997344 34444455443321 12232 3333 3445556666 4 3333333 345
Q ss_pred CCeeEEEEcCcc
Q psy9351 87 TDIVAVGVTNQR 98 (297)
Q Consensus 87 ~~I~~Igis~~~ 98 (297)
++|.+++-++.+
T Consensus 82 ~~v~~vATsA~R 93 (513)
T 1u6z_A 82 ASVCIVGTHTLR 93 (513)
T ss_dssp GGEEEEECHHHH
T ss_pred CEEEEEecHHHH
Confidence 689999888876
No 71
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=89.37 E-value=0.47 Score=41.69 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=25.6
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeEEEEEEeee
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISL 42 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~ 42 (297)
|....|.||+|.|++|.++||. +++++...+.++
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~-~~~~~~~~r~~t 54 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEG-AARSVAGGLAES 54 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEET-TTEEEEEEEESS
T ss_pred ccCcEEEEEeCCCeeEEEEEeC-CCEEEEEEEecC
Confidence 4456799999999999999995 577776655444
No 72
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=87.21 E-value=0.38 Score=43.44 Aligned_cols=30 Identities=17% Similarity=0.356 Sum_probs=21.3
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEeeec
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQISLG 43 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~ 43 (297)
+||+|||+-++|+++++. +|++ ...+.+.|
T Consensus 2 iiG~DIGGAn~K~a~~~~-~g~~-~~~~~~~P 31 (334)
T 3cet_A 2 ILGIDIGGANTKITELHE-NGEF-KVHHLYFP 31 (334)
T ss_dssp EEEEEEC--CEEEEEECS-TTCC-EEEEC---
T ss_pred eeEEEecccceeeeeecC-CCce-EEEEEecC
Confidence 699999999999999996 7887 55566665
No 73
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=86.83 E-value=0.92 Score=41.13 Aligned_cols=77 Identities=18% Similarity=0.113 Sum_probs=44.5
Q ss_pred EEEEEecCCCcceEEEEeCC-CCeE--EEEEEeeeccccCCCCe---eEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCC
Q psy9351 11 LVGAIDEGTSSCRFIVFSAL-TGKL--VAKHQISLGQTFPTEGW---VEQDPMEILAVVNGTIEACQFSACVEKLKEQGI 84 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~-~g~v--~~~~~~~~~~~~~~~g~---~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~ 84 (297)
.+.+||+||.++|..+++.. +|.+ +...+.+..+ ..|- ...++ +-.+...++++ + +.+.+++.+
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrL---g~g~~~~g~ls~-eai~r~~~aL~----~-f~~~~~~~~- 86 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRL---GQDVDKTHRFAD-EALERAYVAAR----E-FAGVIAEHP- 86 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCT---TTTHHHHSSCCH-HHHHHHHHHHH----H-HHHHHTTSC-
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeC---CCCccccCCcCH-HHHHHHHHHHH----H-HHHHHHHCC-
Confidence 57899999999999999973 2333 3333333322 2221 11233 33455556666 4 433344433
Q ss_pred CCCCeeEEEEcCcc
Q psy9351 85 EPTDIVAVGVTNQR 98 (297)
Q Consensus 85 ~~~~I~~Igis~~~ 98 (297)
.++|.+++-++.+
T Consensus 87 -v~~v~~vATsA~R 99 (343)
T 3cer_A 87 -IDGLRFVATSATR 99 (343)
T ss_dssp -CSEEEEEECHHHH
T ss_pred -CCeEEEEecHHHH
Confidence 4578888777765
No 74
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=86.55 E-value=0.46 Score=42.10 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=21.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEE
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAK 37 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~ 37 (297)
+.+|||+|+|.+|+++++ +++++..
T Consensus 21 ~~iGIDiGsTt~K~V~~~--~~~i~~~ 45 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQ--DNQRTFK 45 (287)
T ss_dssp CEEEEEECSSEEEEEEEC--SSCEEEE
T ss_pred eEEEEEEChhhEEEEEEc--CCEEEEE
Confidence 679999999999999996 5777765
No 75
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=86.35 E-value=0.37 Score=44.39 Aligned_cols=25 Identities=20% Similarity=0.040 Sum_probs=19.5
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeE
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKL 34 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v 34 (297)
|.+.++|||+|||+++++++. +|++
T Consensus 11 m~~~vvGIDlGTt~s~va~~~--~g~~ 35 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTV--DDKA 35 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEE--TTEE
T ss_pred CCCcEEEEEcCCCeEEEEEEe--CCce
Confidence 567899999999999999984 4543
No 76
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=85.74 E-value=1.1 Score=41.58 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=26.4
Q ss_pred ccCCEEEEEecCCCcceEEEEeCCCCeEEEEEEe
Q psy9351 7 QYGPLVGAIDEGTSSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 7 ~~~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~ 40 (297)
|..+++|+|..|+||+|..|||..+.+++.+...
T Consensus 16 Ms~klILviN~GSSS~K~~lf~~~~~~~l~~G~~ 49 (415)
T 3sk3_A 16 MSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLA 49 (415)
T ss_dssp --CCEEEEEEECSSCEEEEEEETTTCCEEEEEEE
T ss_pred CCCCeEEEEeCchHhhhheeEECCCCCEEEEeeE
Confidence 3447899999999999999999656777775433
No 77
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=85.66 E-value=0.75 Score=36.60 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=21.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEE
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLV 35 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~ 35 (297)
-+||||.|+..+..++.|. .|.+.
T Consensus 4 riLGiDpG~~riGvAv~d~-~g~~a 27 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE-MGWTA 27 (150)
T ss_dssp EEEEEEECSSEEEEEEECT-TSSSE
T ss_pred EEEEEEccCCEEEEEEEEC-CCCEE
Confidence 5899999999999999997 77653
No 78
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=85.65 E-value=5.1 Score=37.18 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=27.2
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEeee
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQISL 42 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~ 42 (297)
.+.+|+|..|+||+|..|||..+.+++.+...+.
T Consensus 17 ~~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 17 FPVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred CCeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 4568999999999999999964567777665544
No 79
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=85.63 E-value=3.5 Score=37.70 Aligned_cols=85 Identities=18% Similarity=0.211 Sum_probs=53.0
Q ss_pred ccCCEEEEEecCCC--cceEEEEeCCCC---eEEEEEEeeeccccC-------CCCeeEeCHHH---HHHHHHHHHHhhh
Q psy9351 7 QYGPLVGAIDEGTS--SCRFIVFSALTG---KLVAKHQISLGQTFP-------TEGWVEQDPME---ILAVVNGTIEACQ 71 (297)
Q Consensus 7 ~~~~~~lgIDiGtt--~ik~~l~d~~~g---~v~~~~~~~~~~~~~-------~~g~~e~d~~~---~~~~i~~~i~~~~ 71 (297)
|+..++||+=.||| .|-+++++. ++ +++.....|++...- .++. .+.++ +-..+-+...
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~-~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a--- 75 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDF-AGEQPQLIGTHTETIPTHLLKGLQRLCLPGT--DEINRLGRLDRSVGKLFA--- 75 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEEC-SSSSCEEEEEEEECCCHHHHHHHHGGGCTTS--CHHHHHHHHHHHHHHHHH---
T ss_pred CCCCEEEEEecccchhhHeEEEEEE-eCCeEEEEeeeeecCCHHHHHHHHHhcCCCC--CCHHHHHHHHHHHHHHHH---
Confidence 45568999999998 899999997 65 477777888864210 1111 11222 1112222222
Q ss_pred hHHHHHHHHHcCCCCCCeeEEEEcCcc
Q psy9351 72 FSACVEKLKEQGIEPTDIVAVGVTNQR 98 (297)
Q Consensus 72 ~~~~~~~l~~~~~~~~~I~~Igis~~~ 98 (297)
+++-+.++++++++++|.+||..+|.
T Consensus 76 -~av~~~l~~~~~~~~~i~~IGsHGQT 101 (370)
T 3cqy_A 76 -LAVNNLLAKTKIAKDEIIAIGSHGQT 101 (370)
T ss_dssp -HHHHHHHHHHCCCGGGEEEEEEEEEE
T ss_pred -HHHHHHHHHcCCCcccccEEEeCCcc
Confidence 21223366788999999999998875
No 80
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=84.68 E-value=3.9 Score=34.41 Aligned_cols=62 Identities=19% Similarity=0.399 Sum_probs=41.9
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
.+|+||-.+..+-+++++ +|+++..... .. . ...+.+. ..++ + + +++++++..+|.
T Consensus 3 ~iLaIdTS~~~~svAl~~--~~~~~~~~~~-~~--------~-~Hs~~L~----p~i~----~-~---L~~a~~~~~dld 58 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV--NDQVISRSEV-AP--------R-DHTKKVL----PMVD----E-V---LKEAGLTLQDLD 58 (213)
T ss_dssp CEEEEECSSSEEEEEEES--SSCEEEEEEE-CC--------S-CCHHHHH----HHHH----H-H---HHTTTCCTTTCS
T ss_pred EEEEEEccCcceEEEEEE--CCEEEEEEEe-ch--------H-HHHHHHH----HHHH----H-H---HHHcCCCHHHcc
Confidence 479999999999999998 4788765321 11 1 2234444 4444 4 3 455788899999
Q ss_pred EEEEcC
Q psy9351 91 AVGVTN 96 (297)
Q Consensus 91 ~Igis~ 96 (297)
+|+++.
T Consensus 59 ~Iav~~ 64 (213)
T 3r6m_A 59 ALAFGR 64 (213)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998876
No 81
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=84.52 E-value=2.2 Score=41.28 Aligned_cols=56 Identities=20% Similarity=0.300 Sum_probs=38.2
Q ss_pred CCEEEEEecCCCcceEEEEeCCCC--eEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHH
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTG--KLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIE 68 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g--~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~ 68 (297)
|+|++|||||++++.+++-+..+| +.+.+...++.-+ .| ..+|.+.+.+++.++++
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi---KG-t~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM---KG-TRDNIAGTLAALEQALA 58 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS---TT-SGGGHHHHHHHHHHHHT
T ss_pred CcEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc---ce-eeeCHHHHHHHHHHHHH
Confidence 369999999999999999775345 4567766666422 23 23567777766666665
No 82
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=83.26 E-value=1.8 Score=41.37 Aligned_cols=79 Identities=14% Similarity=0.182 Sum_probs=47.5
Q ss_pred CEEEEEecCCCcceEEEEeCCCC--eEEEEEEeeecccc--CCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTG--KLVAKHQISLGQTF--PTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g--~v~~~~~~~~~~~~--~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
+.+.+||+||.|+|..+++..++ +++...+....+-. ...|. .+++ -.+...++++ . ..+.++..+
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~--Ls~e-ai~r~~~~L~----~-F~~~~~~~~-- 84 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGR--MHEE-GVTRALMALR----R-FHVLSEQAQ-- 84 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSS--CCHH-HHHHHHHHHH----H-HHHHHHHTT--
T ss_pred CeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCC--cCHH-HHHHHHHHHH----H-HHHHHHhCC--
Confidence 45789999999999999997433 34554444443211 01121 2333 3445556666 4 444455554
Q ss_pred CCCeeEEEEcCcc
Q psy9351 86 PTDIVAVGVTNQR 98 (297)
Q Consensus 86 ~~~I~~Igis~~~ 98 (297)
.++|.+++-++.+
T Consensus 85 v~~v~~vATsA~R 97 (508)
T 3hi0_A 85 AQKLYVLATAAAR 97 (508)
T ss_dssp CSEEEEEECTHHH
T ss_pred CCeEEEEeeHHHH
Confidence 4689989888876
No 83
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=80.60 E-value=6.6 Score=37.51 Aligned_cols=74 Identities=8% Similarity=0.170 Sum_probs=49.2
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeC-HHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQD-PMEILAVVNGTIEACQFSACVEKLKEQGIEPTD 88 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d-~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~ 88 (297)
+++||||-.+..+-++|++. ++++++....... .+.+|-.... ...-.+.+...++ + + +++ +++.+
T Consensus 6 m~iL~i~ts~~~~~~al~~~-~~~~~~~~~~~~~--~~~gg~~p~~a~~~h~~~l~~~i~----~-~---l~~--~~~~~ 72 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTS-DGEVLFNKTIMYK--PPKQGINPREAADHHAETFPKLIK----E-A---FEV--VDKNE 72 (540)
T ss_dssp CEEEEEECSSSEEEEEEEET-TSCEEEEEEEECC--CCCSSSSCCCHHHHHHHHHHHHHH----H-H---HHH--SCGGG
T ss_pred ceEEEEEcCccceEEEEEEC-CCeEEEEEEEeec--CCCCCCChHHHHHHHHHHHHHHHH----H-H---HHh--CCHhH
Confidence 47999999999999999995 6688887655432 2223422222 2344556666676 5 4 444 56788
Q ss_pred eeEEEEcC
Q psy9351 89 IVAVGVTN 96 (297)
Q Consensus 89 I~~Igis~ 96 (297)
|.+|+++.
T Consensus 73 id~ia~~~ 80 (540)
T 3en9_A 73 IDLIAFSQ 80 (540)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEec
Confidence 99998775
No 84
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=80.45 E-value=7.6 Score=32.84 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=40.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
.+|+||--+..+-+++++ +|+++... .... ....+.+ ..+++ + + +++++++..+|.
T Consensus 2 ~iL~idTs~~~~sval~~--~~~~~~~~-~~~~---------~~h~~~l----~~~i~----~-~---L~~a~~~~~did 57 (231)
T 2gel_A 2 RILAIDTATEACSVALWN--NGTINAHF-ELCP---------REHTQRI----LPMVQ----E-I---LAASGASLNEID 57 (231)
T ss_dssp EEEEEECSSSEEEEEEEE--TTEEEEEE-EECC---------SCCHHHH----HHHHH----H-H---HHHTTCCGGGCS
T ss_pred eEEEEECCCcCeEEEEEE--CCEEEEEE-hhhh---------HHHHHHH----HHHHH----H-H---HHHcCCCHHHCC
Confidence 589999999899999998 47766521 1111 1123333 44444 4 3 455788899999
Q ss_pred EEEEcC
Q psy9351 91 AVGVTN 96 (297)
Q Consensus 91 ~Igis~ 96 (297)
+|+++.
T Consensus 58 ~Iav~~ 63 (231)
T 2gel_A 58 ALAFGR 63 (231)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 998876
No 85
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=79.89 E-value=2.2 Score=39.43 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=25.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISL 42 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~ 42 (297)
.+|+|..|+||+|..|||..+.+++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 48999999999999999974567777665543
No 86
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=77.83 E-value=1 Score=40.91 Aligned_cols=20 Identities=30% Similarity=0.220 Sum_probs=17.4
Q ss_pred CEEEEEecCCCcceEEEEeC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSA 29 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~ 29 (297)
..++|||+|||++++++++.
T Consensus 18 ~~viGID~GTt~s~va~~~~ 37 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKN 37 (394)
T ss_dssp CSCEEEEECSSEEEEEEECS
T ss_pred CCEEEEEeCcCcEEEEEEEC
Confidence 35799999999999999873
No 87
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=77.81 E-value=4.9 Score=31.34 Aligned_cols=26 Identities=23% Similarity=0.029 Sum_probs=21.4
Q ss_pred cCCEEEEEecCCCcceEEEEeCCCCeE
Q psy9351 8 YGPLVGAIDEGTSSCRFIVFSALTGKL 34 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l~d~~~g~v 34 (297)
|+.-+||||+|+..|=+++-|. .+.+
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~-~~~~ 26 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR-ITGT 26 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET-TTTE
T ss_pred CCCeEEEEEeCCCEEEEEEEcC-CCCE
Confidence 4446899999999999999997 6543
No 88
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=77.71 E-value=8.4 Score=35.20 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=50.5
Q ss_pred CEEEEEecCCC--cceEEEEeCCCC--eEEEEEEeeecccc-------CCCCeeEeCHHHH---HHHHHHHHHhhhhHHH
Q psy9351 10 PLVGAIDEGTS--SCRFIVFSALTG--KLVAKHQISLGQTF-------PTEGWVEQDPMEI---LAVVNGTIEACQFSAC 75 (297)
Q Consensus 10 ~~~lgIDiGtt--~ik~~l~d~~~g--~v~~~~~~~~~~~~-------~~~g~~e~d~~~~---~~~i~~~i~~~~~~~~ 75 (297)
+++||+=.||| .|-+++++. ++ +++.....|++... -.++. .+++++ -..+-+... +++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~-~~~~~l~~~~~~py~~~lr~~l~~~~~~~~--~~~~~~~~l~~~lg~~~a----~av 74 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQ-GDRTTLLASHYLPMPAGLREDILALCVPGP--DEIARAAEVEQRWVALAA----QGV 74 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEE-SSSEEEEEEEEEECCHHHHHHHHHTTSCCB--THHHHHHHHHHHHHHHHH----HHH
T ss_pred cEEEEEecccChhhhhEEEEEe-cCCceecceeeecCCHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHHH----HHH
Confidence 48999999998 788899887 55 56677777876321 01111 122221 112223332 312
Q ss_pred HHHHHHcCCCCCCeeEEEEcCcc
Q psy9351 76 VEKLKEQGIEPTDIVAVGVTNQR 98 (297)
Q Consensus 76 ~~~l~~~~~~~~~I~~Igis~~~ 98 (297)
-+.++++++++++|.+||..+|.
T Consensus 75 ~~~l~~~~~~~~~Id~IGsHGQT 97 (371)
T 3qbx_A 75 RELLLQQQMSPDEVRAIGSHGQT 97 (371)
T ss_dssp HHHHHHTTCCGGGCCEEEECCEE
T ss_pred HHHHHHcCCCcccccEEEeCCcc
Confidence 33367789989999999998874
No 89
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=77.12 E-value=0.76 Score=43.40 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=33.0
Q ss_pred CEEEEEecCCCcceEEEEeCCCC-----eEEEEE-EeeeccccCCCCe--eEeCHHHHHHHHHHHHH
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTG-----KLVAKH-QISLGQTFPTEGW--VEQDPMEILAVVNGTIE 68 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g-----~v~~~~-~~~~~~~~~~~g~--~e~d~~~~~~~i~~~i~ 68 (297)
+|.+.||+|++++|..|++...+ .++... .... ..+|. ...+++.+.+.+..+++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~----~~~Gls~~~~~pe~~~~~l~~Ll~ 96 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDV----QGGGISSYANDPSKAGQSLVRCLE 96 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEEC----SSSCGGGGTTSTHHHHHHTHHHHH
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeee----cccccccccCCHHHHHHHHHHHHH
Confidence 58899999999999999985222 122221 1111 01221 11367887777777776
No 90
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=75.45 E-value=1.3 Score=42.65 Aligned_cols=20 Identities=30% Similarity=0.185 Sum_probs=17.4
Q ss_pred CCEEEEEecCCCcceEEEEe
Q psy9351 9 GPLVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d 28 (297)
|..++|||+|||+..+++++
T Consensus 3 m~~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp SCCCEEEEECSSEEEEEEEC
T ss_pred CCCEEEEEeCcccEEEEEEE
Confidence 34679999999999999887
No 91
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=74.42 E-value=1.3 Score=40.09 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=16.5
Q ss_pred EEEEEecCCCcceEEEEe
Q psy9351 11 LVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d 28 (297)
.++|||+|||++++++++
T Consensus 3 ~~vGIDlGTt~s~va~~~ 20 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMD 20 (383)
T ss_dssp CCCEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEEE
Confidence 479999999999999997
No 92
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=72.96 E-value=5.7 Score=36.44 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=25.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQIS 41 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~ 41 (297)
.+|.|..|+||+|..|||..+.+++++...+
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 33 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGLAE 33 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEEEE
Confidence 7899999999999999997567777765443
No 93
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=71.35 E-value=2.5 Score=41.17 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=16.6
Q ss_pred EEEEEecCCCcceEEEEe
Q psy9351 11 LVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d 28 (297)
.++|||+|||+..+++++
T Consensus 3 ~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 579999999999999986
No 94
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=70.24 E-value=2.3 Score=38.72 Aligned_cols=19 Identities=32% Similarity=0.207 Sum_probs=17.0
Q ss_pred EEEEEecCCCcceEEEEeC
Q psy9351 11 LVGAIDEGTSSCRFIVFSA 29 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~ 29 (297)
.++|||+|||++++++++.
T Consensus 24 ~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 24 PAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp CCEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCccEEEEEEEC
Confidence 4799999999999999883
No 95
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=70.08 E-value=5.2 Score=37.30 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=26.1
Q ss_pred CCEEEEEecCCCcceEEEEeCCCCeEEEEEEe
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~ 40 (297)
++.+|.|..|+||+|..|||..+.+++++...
T Consensus 5 ~~~ILviNaGSSSlKf~L~~~~~~~~l~~G~v 36 (438)
T 4h0p_A 5 AEYLLAINCGSSSIKGKLFAIPSFELLANLAV 36 (438)
T ss_dssp CEEEEEEEECSSCEEEEEEEETTTEEEEEEEE
T ss_pred CCEEEEEECCcccceeEEEEcCCCCeeeEEEE
Confidence 45789999999999999999756777776544
No 96
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=69.92 E-value=12 Score=36.21 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=38.2
Q ss_pred CCEEEEEecCCCcceEEEEeCC-CCe--EEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCC
Q psy9351 9 GPLVGAIDEGTSSCRFIVFSAL-TGK--LVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIE 85 (297)
Q Consensus 9 ~~~~lgIDiGtt~ik~~l~d~~-~g~--v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~ 85 (297)
|+++.|||||.+++-+++-+.. +|+ .+.+.-.++.-+ .|.. ++..-+. .+++ + + +++.+.+
T Consensus 1 m~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ttg~---kgt~-~n~~g~~----~~l~----~-~---~~~~~~~ 64 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGI---KGTL-RNVFGIQ----EALA----L-V---ARGAGIA 64 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSS---TTST-THHHHHH----HHHH----H-H---HHHHTCC
T ss_pred CcEEEEEecCCcchheeeeeecCCCceEEeeccccccCCc---cCcH-HHHHHHH----HHHH----H-H---HHHcCCC
Confidence 3589999999998888876542 353 444555555322 2222 3333344 4444 3 3 3445666
Q ss_pred CCCeeEE
Q psy9351 86 PTDIVAV 92 (297)
Q Consensus 86 ~~~I~~I 92 (297)
.+++.-|
T Consensus 65 ~~~~~li 71 (610)
T 2d0o_A 65 VSDISLI 71 (610)
T ss_dssp GGGEEEE
T ss_pred hhhceee
Confidence 6666654
No 97
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=68.67 E-value=11 Score=31.71 Aligned_cols=63 Identities=13% Similarity=0.048 Sum_probs=41.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccccCCCCeeEeCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQTFPTEGWVEQDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIV 90 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~ 90 (297)
.+|+||-.+..+-+++++ +++++ ....... . .-.+.+. ..++ + + +++++++..+|.
T Consensus 13 ~iLaidTS~~~~sval~~--~~~~l-~~~~~~~--------r-~Hse~L~----p~i~----~-~---L~~a~~~~~dld 68 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRK--GEDLF-EISYTGE--------K-KHAEILP----VVVK----K-L---LDELDLKVKDLD 68 (218)
T ss_dssp CEEEEEECSSSEEEEEEE--TTEEE-EEEEESC--------G-GGGGHHH----HHHH----H-H---HHHHTCCGGGCS
T ss_pred eEEEEEcCCcCeEEEEEE--CCEEE-EEEecch--------H-HHHHHHH----HHHH----H-H---HHHcCCCHHHCC
Confidence 479999999999999998 46777 3222221 0 1123344 4444 3 3 445678889999
Q ss_pred EEEEcCc
Q psy9351 91 AVGVTNQ 97 (297)
Q Consensus 91 ~Igis~~ 97 (297)
+|+++.-
T Consensus 69 ~Iav~~G 75 (218)
T 2a6a_A 69 VVGVGIG 75 (218)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9988863
No 98
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=66.41 E-value=8.6 Score=28.00 Aligned_cols=21 Identities=29% Similarity=0.286 Sum_probs=18.7
Q ss_pred EEEEecCCCcceEEEEeCCCCe
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGK 33 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~ 33 (297)
+||||+|+..+=+++-|. .+.
T Consensus 3 iLglD~G~kriGvAvsd~-~~~ 23 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE-GVP 23 (98)
T ss_dssp EEEEEESSSEEEEEEECS-CCS
T ss_pred EEEEEeCCCEEEEEEEeC-CCC
Confidence 699999999999999997 553
No 99
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=65.41 E-value=3.6 Score=40.73 Aligned_cols=18 Identities=17% Similarity=0.132 Sum_probs=16.4
Q ss_pred EEEEecCCCcceEEEEeC
Q psy9351 12 VGAIDEGTSSCRFIVFSA 29 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~ 29 (297)
++|||+|||+.++++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 799999999999999873
No 100
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=64.73 E-value=4.3 Score=38.50 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=16.6
Q ss_pred EEEEEecCCCcceEEEEe
Q psy9351 11 LVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d 28 (297)
.++|||+|||++++++++
T Consensus 3 ~~iGIDlGTt~s~va~~~ 20 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLE 20 (509)
T ss_dssp CEEEEEECSSEEEEEEEE
T ss_pred CEEEEEcCCceEEEEEEE
Confidence 479999999999999987
No 101
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=64.24 E-value=15 Score=36.91 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=26.6
Q ss_pred CCEEEEEecC-CCcceEEEEeCCCCeEEEEEEe
Q psy9351 9 GPLVGAIDEG-TSSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 9 ~~~~lgIDiG-tt~ik~~l~d~~~g~v~~~~~~ 40 (297)
.+.+||+|-| .|.+|++++|. +|+++.....
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~-~G~~l~~~~i 359 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDA-TGKLLDTATV 359 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEECCCCcCceEEEEECC-CCCEEEEEEE
Confidence 3468999999 69999999997 9999987654
No 102
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=63.79 E-value=3.1 Score=37.03 Aligned_cols=17 Identities=24% Similarity=0.100 Sum_probs=14.8
Q ss_pred EEEEEecCCCcceEEEE
Q psy9351 11 LVGAIDEGTSSCRFIVF 27 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~ 27 (297)
..+|||+||+++|+++.
T Consensus 4 ~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR 20 (344)
T ss_dssp CEEEEEECSSEEEEEET
T ss_pred ceEEEEcCcCcEEEEEC
Confidence 47999999999999863
No 103
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=63.09 E-value=9.8 Score=35.21 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=25.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeee
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISL 42 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~ 42 (297)
.+|+|..|+||+|..|||..+.+++.+...+.
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 47999999999999999974567777665543
No 104
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=62.09 E-value=4.1 Score=39.66 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=16.0
Q ss_pred EEEEEecCCCcceEEEEe
Q psy9351 11 LVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d 28 (297)
.++|||+|||++.+++++
T Consensus 3 ~viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp -CEEEECCSSEEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEEE
Confidence 479999999999999987
No 105
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=60.76 E-value=21 Score=31.57 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=27.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeeccc
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQT 45 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~ 45 (297)
-.+.+|||+.|+-.++++ ++++....+.|+...
T Consensus 132 ~~lviDIGGGStEl~~~~--~~~~~~~~Sl~lG~v 164 (315)
T 3mdq_A 132 ISLAMDIGGGSVEFIIGN--KNEILWKQSFEIGGQ 164 (315)
T ss_dssp CEEEEEECSSCEEEEEEC--SSCEEEEEEESCCHH
T ss_pred CEEEEEeCCCceEEEEEE--CCeEeeeEEEechhh
Confidence 367899999999999998 588988888888643
No 106
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=58.46 E-value=20 Score=37.26 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=26.1
Q ss_pred CCEEEEEecCC-----CcceEEEEeCCCCeEEEEEEe
Q psy9351 9 GPLVGAIDEGT-----SSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 9 ~~~~lgIDiGt-----t~ik~~l~d~~~g~v~~~~~~ 40 (297)
.+.+||||-|- +.+|++++|. +|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~-~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECC-CCCEEEEEEE
Confidence 35789999984 3899999997 9999997766
No 107
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=56.33 E-value=7.1 Score=34.40 Aligned_cols=23 Identities=17% Similarity=0.345 Sum_probs=18.9
Q ss_pred EEEEecCCCcceEEEEeCCCCeEE
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLV 35 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~ 35 (297)
.+|||+|++++|++..+. +|++.
T Consensus 2 ~igiD~G~sntK~~~~~~-~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQES-DGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECS-SSCEE
T ss_pred eEEEecCCccceEEEecC-CCEEE
Confidence 589999999999998665 67643
No 108
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=56.04 E-value=44 Score=26.67 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=19.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCe
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGK 33 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~ 33 (297)
.+||||-|++.+=.+++|. +|+
T Consensus 2 rILGIDPGl~~tG~gvi~~-~g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV-EGK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE-CSS
T ss_pred EEEEEccccCceEEEEEEe-cCC
Confidence 5899999999999999997 664
No 109
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.43 E-value=4.3 Score=38.16 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=32.8
Q ss_pred CEEEEEecCCCcceEEEEeCCCCe-----EEEEEEeeeccccCCCC---eeEeCHHHHHHHHHHHHH
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGK-----LVAKHQISLGQTFPTEG---WVEQDPMEILAVVNGTIE 68 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~-----v~~~~~~~~~~~~~~~g---~~e~d~~~~~~~i~~~i~ 68 (297)
+|.+.||+|++++|..||.....+ ++.. .... ....+| +. .+|+...+.+..+++
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~-~~~~--k~~gpGlSs~~-~~p~~~~~~l~~Ll~ 96 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQ-LEEC--QVKGPGISKYA-QKTDEIAAYLAECMK 96 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEE-EEEE--ECSSSCGGGGT-TCGGGHHHHHHHHHH
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccce-eeee--cccCCChhccC-CCHHHHHHHHHHHHH
Confidence 488899999999999999862211 2211 1111 111233 22 367777777777776
No 110
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=55.17 E-value=6.7 Score=35.55 Aligned_cols=20 Identities=25% Similarity=0.569 Sum_probs=18.1
Q ss_pred CEEEEEecCCCcceEEEEeC
Q psy9351 10 PLVGAIDEGTSSCRFIVFSA 29 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~ 29 (297)
+++++||+|++++|..|++.
T Consensus 3 ~~~avID~GSns~Rl~I~~~ 22 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSY 22 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEE
Confidence 36899999999999999985
No 111
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=55.01 E-value=14 Score=29.01 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=31.8
Q ss_pred eCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCeeEEEEcCcc
Q psy9351 54 QDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIVAVGVTNQR 98 (297)
Q Consensus 54 ~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~~Igis~~~ 98 (297)
.+++++++++.++++ + + +++.++++++|.+|-|+...
T Consensus 44 Nt~e~I~~At~ELl~----e-i---i~~N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 44 NTADEIVAETQKLLK----E-M---AEKNGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSHHHHHHHHHHHHH----H-H---HHHTTCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHH----H-H---HHHcCCCHHHEEEEEEEeCC
Confidence 568999999999998 7 6 56788999999999998864
No 112
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=52.36 E-value=2.8 Score=35.23 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=10.3
Q ss_pred EEEecCCCcc--------eEEEEeCCCCeEE
Q psy9351 13 GAIDEGTSSC--------RFIVFSALTGKLV 35 (297)
Q Consensus 13 lgIDiGtt~i--------k~~l~d~~~g~v~ 35 (297)
=|+|+||.++ |+++||. +|.++
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDl-DGTLv 38 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDL-DGVIT 38 (250)
T ss_dssp ---------------CCCCEEEECT-BTTTB
T ss_pred ccccCCCCCcccCccchhheeeecC-CCccc
Confidence 4789999987 8999998 89764
No 113
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=51.87 E-value=16 Score=27.91 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=31.6
Q ss_pred eCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCCCCeeEEEEcCcc
Q psy9351 54 QDPMEILAVVNGTIEACQFSACVEKLKEQGIEPTDIVAVGVTNQR 98 (297)
Q Consensus 54 ~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~~~I~~Igis~~~ 98 (297)
.+++++++++.+.++ + + +++.++++++|.+|-||...
T Consensus 15 Nt~e~I~~at~eLl~----~-i---~~~N~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 15 DTEEEILQKTKQLLE----K-I---IEENHTKPEDVVQMLLSATP 51 (127)
T ss_dssp CCHHHHHHHHHHHHH----H-H---HHHHCCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHH----H-H---HHHcCCCHHHEEEEEEEeCC
Confidence 468999999999998 7 6 56688999999999998864
No 114
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=50.72 E-value=6.9 Score=34.84 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=17.7
Q ss_pred ccccCCEEEEEecCCCcceEEEE
Q psy9351 5 KGQYGPLVGAIDEGTSSCRFIVF 27 (297)
Q Consensus 5 ~~~~~~~~lgIDiGtt~ik~~l~ 27 (297)
..|+.++++|||+|-.++|++.-
T Consensus 2 ~~~~~~~iigiD~G~~~~K~~~~ 24 (329)
T 4apw_A 2 ENITNEYVMTLDAGKYETKLIGK 24 (329)
T ss_dssp ---CCEEEEEEEECSSEEEEEEH
T ss_pred CCccCceEEEEecCCceEEEEec
Confidence 45667789999999999999863
No 115
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=48.90 E-value=21 Score=27.08 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=31.4
Q ss_pred eCHHHHHHHHHHHHHhhhhHHHHHHHHHcCCCC-CCeeEEEEcCcc
Q psy9351 54 QDPMEILAVVNGTIEACQFSACVEKLKEQGIEP-TDIVAVGVTNQR 98 (297)
Q Consensus 54 ~d~~~~~~~i~~~i~~~~~~~~~~~l~~~~~~~-~~I~~Igis~~~ 98 (297)
.+++++++++.+.++ + + +++.++++ ++|.+|-||...
T Consensus 14 n~~e~I~~at~eLl~----~-i---~~~N~l~~~~divSv~FT~T~ 51 (122)
T 1ufy_A 14 DTPEAIHQATRELLL----K-M---LEANGIQSYEELAAVIFTVTE 51 (122)
T ss_dssp SSHHHHHHHHHHHHH----H-H---HHHHTCCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHH----H-H---HHhcCCCChHhEEEEEEEeCC
Confidence 468999999999998 7 6 56678999 999999998865
No 116
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=47.03 E-value=38 Score=35.81 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=26.2
Q ss_pred CCEEEEEecCC-----CcceEEEEeCCCCeEEEEEEe
Q psy9351 9 GPLVGAIDEGT-----SSCRFIVFSALTGKLVAKHQI 40 (297)
Q Consensus 9 ~~~~lgIDiGt-----t~ik~~l~d~~~g~v~~~~~~ 40 (297)
.+.+||||-|- +.+|++++|. +|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~-~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECC-CCCEEEEEEE
Confidence 35789999985 3899999997 9999997766
No 117
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=44.34 E-value=41 Score=26.62 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=19.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCe
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGK 33 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~ 33 (297)
.+||||-|++++=.++++. +|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~-~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ-VGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE-ETT
T ss_pred EEEEEccCCCCeeEEEEEe-cCC
Confidence 4899999999999999996 664
No 118
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=40.32 E-value=38 Score=31.16 Aligned_cols=28 Identities=25% Similarity=0.360 Sum_probs=22.4
Q ss_pred CEEEEEecCCCcceEEEEeCCCCeEEEEEE
Q psy9351 10 PLVGAIDEGTSSCRFIVFSALTGKLVAKHQ 39 (297)
Q Consensus 10 ~~~lgIDiGtt~ik~~l~d~~~g~v~~~~~ 39 (297)
..+|.|..|+||+|..|||. .+++++..
T Consensus 14 ~~iLviN~GSSSlKf~l~~~--~~~l~~G~ 41 (404)
T 4h0o_A 14 SNVLIFNVGSSSLTYKVFCS--DNIVCSGK 41 (404)
T ss_dssp CEEEEEEECSSCEEEEEEET--TEEEEEEE
T ss_pred ceEEEEECCchhheeeEeec--chhhhcce
Confidence 36899999999999999995 55665443
No 119
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=36.06 E-value=18 Score=32.36 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=14.8
Q ss_pred cCCEEEEEecCCCcceEEE
Q psy9351 8 YGPLVGAIDEGTSSCRFIV 26 (297)
Q Consensus 8 ~~~~~lgIDiGtt~ik~~l 26 (297)
|++..+|||+|+.++|+..
T Consensus 19 ~~m~~igiDlG~~~tkv~~ 37 (346)
T 2fsj_A 19 SHMVVVGLDVGYGDTKVIG 37 (346)
T ss_dssp --CEEEEEEECSSEEEEEC
T ss_pred ceeEEEEEecCCcceeEEe
Confidence 3446799999999999883
No 120
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=32.54 E-value=15 Score=27.50 Aligned_cols=29 Identities=24% Similarity=0.457 Sum_probs=21.8
Q ss_pred HHHHHhChhhHhhhhcCceeeeChhHHHHHHHc
Q psy9351 160 NWLMNNVPKVKEAIDQNRCCIGTVDTWIIWNLT 192 (297)
Q Consensus 160 ~wl~~~~p~~~~~~~~~~~~~~~~~dyi~~~Lt 192 (297)
.|+++|..+++.+- +.-..=.|||.|+++
T Consensus 83 kwf~rnc~~v~gr~----cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 83 KWLGRNCNSVIGRD----CTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHSSC----CCHHHHHHHHHHHHT
T ss_pred HHHHhhhhHHHccc----CCHHHHHHHHHHHHh
Confidence 48888888887654 455556799999986
No 121
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=30.57 E-value=33 Score=30.74 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=24.4
Q ss_pred EEEEecCCCcceEEEEeC--CC--CeEEEEEEeeecc
Q psy9351 12 VGAIDEGTSSCRFIVFSA--LT--GKLVAKHQISLGQ 44 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~--~~--g~v~~~~~~~~~~ 44 (297)
.+.+|||+.|+-.++++. .. ++++...+.|+..
T Consensus 148 ~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~ 184 (343)
T 3cer_A 148 YLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGS 184 (343)
T ss_dssp EEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCH
T ss_pred EEEEEeCCCceEEEEeecCccCcccccceeEEEehhH
Confidence 688999999999999973 11 4455677777753
No 122
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=29.60 E-value=51 Score=29.01 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=27.3
Q ss_pred EEEEEecCCCcceEEEEeCCCCeEEEEEEeeecc
Q psy9351 11 LVGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQ 44 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~ 44 (297)
-.+.+|||+.|+-.++++ +++++...+.|+..
T Consensus 139 ~~lvvDIGGGStEl~~~~--~~~~~~~~Sl~~G~ 170 (315)
T 1t6c_A 139 EVCVVDQGGGSTEYVFGK--GYKVREVISLPIGI 170 (315)
T ss_dssp EEEEEEEETTEEEEEEEE--TTEEEEEEEECCCH
T ss_pred CEEEEEeCCCcEEEEEEe--CCceeeEEEEeccH
Confidence 468899999999999998 58888888888764
No 123
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=25.73 E-value=32 Score=25.60 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHhCCCChhhhHHhhhCCC-CCC--cchHHH-HHHHHHhChhhHhhhh
Q psy9351 122 RTTSTLEKILEVVPNKNKNYLAPLCGLP-LSP--YFSALK-INWLMNNVPKVKEAID 174 (297)
Q Consensus 122 R~~~~~~~l~~~~~~~~~~~~~~~tG~~-~~~--~~~~~k-l~wl~~~~p~~~~~~~ 174 (297)
+++++..+|.+.++ +.+. |++. .++ -..+-| +.|+.+++|+.|+++.
T Consensus 37 pCtpegk~lK~~lp----eAl~--t~C~KCTekQK~~~~kvi~~l~~n~P~~W~~L~ 87 (109)
T 2gvs_A 37 NCTADGKELKSVIP----DALS--NECAKCNEKQKEGTKKVLKHLINHKPDVWAQLK 87 (109)
T ss_dssp TCCTTHHHHHHHTT----HHHH--STTTTSCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCCHHHHHHHHHhH----HHHh--ccCCCCCHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 45555666666654 3332 3322 111 122333 6699999999998873
No 124
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=23.63 E-value=86 Score=29.58 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=27.1
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEeeeccc
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQISLGQT 45 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~~~~~ 45 (297)
.+.+|||+.|+-.++++ +++++...+.|+...
T Consensus 139 ~lviDIGGGStEl~~~~--~~~~~~~~Sl~lG~v 170 (513)
T 1u6z_A 139 KLVIDIGGGSTELVIGE--NFEPILVESRRMGCV 170 (513)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEEEEEEESCCHH
T ss_pred EEEEEECCCcEEEEEEe--CCeeeEEEEEeccHH
Confidence 68899999999999998 588888888877643
No 125
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=23.62 E-value=32 Score=31.22 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=15.3
Q ss_pred EEEEEecCCCcceEEEEe
Q psy9351 11 LVGAIDEGTSSCRFIVFS 28 (297)
Q Consensus 11 ~~lgIDiGtt~ik~~l~d 28 (297)
-.++||+||+++|+....
T Consensus 6 ~~ivID~Gs~~~k~G~~~ 23 (418)
T 1k8k_A 6 PACVVDCGTGYTKLGYAG 23 (418)
T ss_dssp CCEEEEECSSEEEEEETT
T ss_pred CeEEEECCCCeEEEeeCC
Confidence 468999999999998654
No 126
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=21.18 E-value=70 Score=26.72 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=21.8
Q ss_pred EEEEecCCCcceEEEEeCCCCeEEEEEEee
Q psy9351 12 VGAIDEGTSSCRFIVFSALTGKLVAKHQIS 41 (297)
Q Consensus 12 ~lgIDiGtt~ik~~l~d~~~g~v~~~~~~~ 41 (297)
.+.||+|+.++.++++. +|+++...+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~~~~~~~~ 168 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKITATFDEP 168 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEEEEECCBS
T ss_pred EEEEEECCCcEEEEEEE--CCEEEEEecCC
Confidence 47899999999999998 58777543333
Done!