Your job contains 1 sequence.
>psy9352
MGGTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNR
WRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDG
LVEDMAKEYKVKVEQHVSHTLYNTNL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9352
(146 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 412 1.6e-38 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 370 1.2e-33 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 370 1.3e-33 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 370 1.3e-33 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 368 2.2e-33 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 364 3.0e-33 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 365 4.5e-33 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 365 5.5e-33 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 364 5.9e-33 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 353 1.2e-31 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 351 1.5e-31 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 349 2.6e-31 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 349 2.6e-31 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 349 2.6e-31 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 349 2.6e-31 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 349 2.6e-31 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 349 2.6e-31 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 349 2.6e-31 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 349 3.0e-31 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 345 7.3e-31 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 346 8.1e-31 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 345 9.3e-31 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 345 9.3e-31 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 345 9.5e-31 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 345 1.2e-30 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 340 3.3e-30 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 339 3.9e-30 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 266 2.8e-22 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 265 3.2e-22 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 264 4.4e-22 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 264 4.4e-22 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 258 2.3e-21 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 256 3.0e-21 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 256 3.3e-21 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 254 5.0e-21 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 240 2.3e-19 1
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 223 1.2e-17 1
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 222 1.6e-17 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 222 2.5e-17 1
TAIR|locus:2061961 - symbol:PHR2 "photolyase/blue-light r... 161 4.4e-11 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 150 8.9e-10 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 135 3.2e-08 1
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 118 3.6e-06 1
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 115 6.6e-06 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 102 0.00081 1
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 76/138 (55%), Positives = 97/138 (70%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
VHW RKG+RLHDNPAL N ++P++ILDP +M+VG NRWRFLQQ+L
Sbjct: 9 VHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVGANRWRFLQQTL 68
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
DLD + R L SRL+VV+GKP EVFP IFK+W +++LT+E DIEPY+ RD V+ +AK
Sbjct: 69 EDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQKLAKA 128
Query: 129 YKVKVEQHVSHTLYNTNL 146
V+VE H SHT+YN L
Sbjct: 129 EGVRVETHCSHTIYNPEL 146
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 370 (135.3 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 75/143 (52%), Positives = 95/143 (66%)
Query: 1 MGGTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNR 60
MG +VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NR
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINR 69
Query: 61 WRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDG 120
WRFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD
Sbjct: 70 WRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDA 129
Query: 121 LVEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 130 AIMKMAKEAGVEVVTENSHTLYD 152
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 370 (135.3 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 75/143 (52%), Positives = 95/143 (66%)
Query: 1 MGGTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNR 60
MG +VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NR
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINR 69
Query: 61 WRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDG 120
WRFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD
Sbjct: 70 WRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDA 129
Query: 121 LVEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 130 AIMKMAKEAGVEVVTENSHTLYD 152
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 370 (135.3 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 75/143 (52%), Positives = 95/143 (66%)
Query: 1 MGGTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNR 60
MG +VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NR
Sbjct: 16 MGADGASSVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINR 69
Query: 61 WRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDG 120
WRFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD
Sbjct: 70 WRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDA 129
Query: 121 LVEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 130 AIMKMAKEAGVEVVTENSHTLYD 152
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 368 (134.6 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 74/136 (54%), Positives = 92/136 (67%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
+VHW RKG+RLHDNPAL A+N G + + + +YILDP F VG NRWRFL +S
Sbjct: 5 SVHWFRKGLRLHDNPALQEALN-----GADTV-RCVYILDPWFAGSANVGVNRWRFLLES 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL VV+G+P +VFP +FK WN+ LT+EYD EPY K+RD + MA+
Sbjct: 59 LEDLDTSLRKLNSRLSVVRGQPTDVFPRLFKEWNVTRLTFEYDSEPYGKERDAAIIKMAQ 118
Query: 128 EYKVKVEQHVSHTLYN 143
EY V+ SHTLYN
Sbjct: 119 EYGVETVVRNSHTLYN 134
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 364 (133.2 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 71/135 (52%), Positives = 94/135 (69%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
+HW RKG+RLHDNPAL++A+ + ++I PL++LDP F K R+G NRWRFL ++L
Sbjct: 32 IHWFRKGLRLHDNPALIAAL----KDCRHIY--PLFLLDPWFPKNTRIGINRWRFLIEAL 85
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
DLD + L SRL+VV+G P EV P +FK W I LT+E D EPY++ RD V +AKE
Sbjct: 86 KDLDSSLKKLNSRLFVVRGSPTEVLPKLFKQWKITRLTFEVDTEPYSQSRDKEVMKLAKE 145
Query: 129 YKVKVEQHVSHTLYN 143
Y V+V +SHTLYN
Sbjct: 146 YGVEVTPKISHTLYN 160
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 365 (133.5 bits), Expect = 4.5e-33, P = 4.5e-33
Identities = 75/142 (52%), Positives = 95/142 (66%)
Query: 3 GTPECA-VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRW 61
GT + VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NRW
Sbjct: 18 GTDSASSVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINRW 71
Query: 62 RFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGL 121
RFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD
Sbjct: 72 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA 131
Query: 122 VEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 132 IMKMAKEAGVEVVTENSHTLYD 153
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 365 (133.5 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 75/142 (52%), Positives = 95/142 (66%)
Query: 3 GTPECA-VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRW 61
GT + VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NRW
Sbjct: 39 GTDSASSVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINRW 92
Query: 62 RFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGL 121
RFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD
Sbjct: 93 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAA 152
Query: 122 VEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 153 IMKMAKEAGVEVVTENSHTLYD 174
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 364 (133.2 bits), Expect = 5.9e-33, P = 5.9e-33
Identities = 73/136 (53%), Positives = 93/136 (68%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
+VHW RKG+RLHDNPALL+A+ +G + + +YILDP F VG NRWRFL QS
Sbjct: 24 SVHWFRKGLRLHDNPALLAAV-----RGARCV-RCVYILDPWFAASSSVGINRWRFLLQS 77
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+ K+RD + MAK
Sbjct: 78 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 137
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V SHTLY+
Sbjct: 138 EAGVEVVTENSHTLYD 153
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 353 (129.3 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 72/142 (50%), Positives = 93/142 (65%)
Query: 2 GGTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRW 61
G +VHW RKG+RLHDNPALL+A+ +G + + + +YILDP F VG NRW
Sbjct: 38 GAEGASSVHWFRKGLRLHDNPALLAAV-----RGAHCV-RCVYILDPWFAASSSVGINRW 91
Query: 62 RFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGL 121
RFL QSL DLD R L SRL+VV+G+P +VFP + W + LT+EYD EP+ K+RD
Sbjct: 92 RFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPGYSREWGVTRLTFEYDSEPFGKERDAA 151
Query: 122 VEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 152 IMKMAKEAGVEVVTENSHTLYD 173
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 351 (128.6 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 71/136 (52%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
+VHW R+G+RLHDNPAL +A+ +G L+ +YILDP F VG NRWRFL QS
Sbjct: 14 SVHWFRRGLRLHDNPALQAAL-----RGA-ASLRCIYILDPWFAASSAVGINRWRFLLQS 67
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+VV+G+P +VFP +FK W + L +EYD EP+ K+RD + +AK
Sbjct: 68 LEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLAFEYDSEPFGKERDAAIIKLAK 127
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V SHTLYN
Sbjct: 128 EAGVEVVIENSHTLYN 143
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 349 (127.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 349 (127.9 bits), Expect = 3.0e-31, P = 3.0e-31
Identities = 70/136 (51%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 345 (126.5 bits), Expect = 7.3e-31, P = 7.3e-31
Identities = 70/136 (51%), Positives = 90/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALKECI-----QGADTI-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL V++G+P +VFP +FK WNI L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLAT 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 346 (126.9 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 67/136 (49%), Positives = 92/136 (67%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
+VHW RKG+RLHDNPALL A+N G + L + +Y LDP F +G NRWRFL QS
Sbjct: 5 SVHWFRKGLRLHDNPALLEALN-----GADTL-RCVYFLDPWFAGASNLGVNRWRFLLQS 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L S L+V++G+P ++FP +FK W + LT+E+D EP+ K+RD ++ +A
Sbjct: 59 LEDLDASLRKLNSCLFVIRGQPADIFPRLFKEWKVSRLTFEFDSEPFGKERDAAIKKLAC 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVKISHTLYD 134
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 345 (126.5 bits), Expect = 9.3e-31, P = 9.3e-31
Identities = 69/136 (50%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALRECI-----RGADTV-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK W+I L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLAS 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 345 (126.5 bits), Expect = 9.3e-31, P = 9.3e-31
Identities = 69/136 (50%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALRECI-----RGADTV-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK W+I L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLAS 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 345 (126.5 bits), Expect = 9.5e-31, P = 9.5e-31
Identities = 69/136 (50%), Positives = 91/136 (66%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
AVHW RKG+RLHDNPAL I +G + + + +YILDP F VG NRWRFL Q
Sbjct: 5 AVHWFRKGLRLHDNPALRECI-----RGADTV-RCVYILDPWFAGSSNVGINRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+V++G+P +VFP +FK W+I L+ EYD EP+ K+RD ++ +A
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLAS 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V +SHTLY+
Sbjct: 119 EAGVEVIVRISHTLYD 134
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 345 (126.5 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 68/136 (50%), Positives = 89/136 (65%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQS 67
++HW RKG+RLHDNPAL A+ +G + + + +Y LDP F +G NRWRFL Q
Sbjct: 5 SIHWFRKGLRLHDNPALQEAV-----RGADTV-RCVYFLDPWFAGSSNLGVNRWRFLLQC 58
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD R L SRL+VV+G+P VFP +FK W I LT+EYD EP+ K+RD ++ +A
Sbjct: 59 LDDLDSNLRKLNSRLFVVRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDAAIKKLAM 118
Query: 128 EYKVKVEQHVSHTLYN 143
E V+V SHTLYN
Sbjct: 119 EAGVEVIVKTSHTLYN 134
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 340 (124.7 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 67/135 (49%), Positives = 91/135 (67%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
VHW RKG+RLHDNP+L +I G + + + +YILDP F VG +RWRFL Q L
Sbjct: 6 VHWFRKGLRLHDNPSLRDSI-----LGAHSV-RCVYILDPWFAGSSNVGISRWRFLLQCL 59
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
DLD R L SRL+V++G+P +VFP +FK WNI L++EYD EP+ K+RD ++ +A E
Sbjct: 60 EDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYDSEPFGKERDAAIKKLANE 119
Query: 129 YKVKVEQHVSHTLYN 143
V+V +SHTLY+
Sbjct: 120 AGVEVIVRISHTLYD 134
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 339 (124.4 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 68/135 (50%), Positives = 89/135 (65%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
VHW RKG+RLHDNP+L +I KG + L + +YILDP F VG +RWRFL Q L
Sbjct: 6 VHWFRKGLRLHDNPSLRDSI-----KGADNL-RCVYILDPWFAGSSNVGISRWRFLLQCL 59
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
DLD R L SRL+V++G+P +VFP +FK W I L++EYD EP+ K RD + +A E
Sbjct: 60 EDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISRLSYEYDSEPFGKDRDAAIRKLATE 119
Query: 129 YKVKVEQHVSHTLYN 143
V+V +SHTLY+
Sbjct: 120 AGVEVFVRISHTLYD 134
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 266 (98.7 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 61/142 (42%), Positives = 83/142 (58%)
Query: 11 WIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRK-----FM----RVGPNRW 61
W RKG+R+HDNPAL Y + KG + P++++DPH+ + F R G NR
Sbjct: 29 WFRKGLRVHDNPAL----EYAS-KGSEFMY-PVFVIDPHYMESDPSAFSPGSSRAGVNRI 82
Query: 62 RFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGL 121
RFL +SL DLD + LGSRL V +G+P EV + W +K L +EYD +PY + D
Sbjct: 83 RFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVK 142
Query: 122 VEDMAKEYKVKVEQHVSHTLYN 143
V+D A V+V VSHTL+N
Sbjct: 143 VKDYASSTGVEVFSPVSHTLFN 164
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 265 (98.3 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 52/97 (53%), Positives = 65/97 (67%)
Query: 47 DPHFRKFMRVGPNRWRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLT 106
DP F VG NRWRFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT
Sbjct: 2 DPWFAASSAVGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLT 61
Query: 107 WEYDIEPYAKKRDGLVEDMAKEYKVKVEQHVSHTLYN 143
+EYD EP+ K+RD + +AKE V+V SHTLY+
Sbjct: 62 FEYDSEPFGKERDAAIIKLAKEAGVEVVIENSHTLYD 98
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 264 (98.0 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 53/133 (39%), Positives = 80/133 (60%)
Query: 11 WIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSLAD 70
W R G+RLHDNP+LL A+ +++ L P++I D VG NR +FL +SLAD
Sbjct: 8 WFRHGLRLHDNPSLLEALRNDGTGSESVRLYPIFIFDGESAGTKLVGFNRMKFLLESLAD 67
Query: 71 LDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKEYK 130
LD++ R +G +LYV +G V +F+ NI+ L +E D EP K RD ++++ +
Sbjct: 68 LDRQLREIGGQLYVFKGNAVNVMRRLFEELNIRKLCFEQDCEPIWKARDDAIQNLCRMMD 127
Query: 131 VKVEQHVSHTLYN 143
VK + VSHTL++
Sbjct: 128 VKCVEKVSHTLWD 140
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 264 (98.0 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 57/135 (42%), Positives = 81/135 (60%)
Query: 11 WIRKGMRLHDNPALLSAINYK--NEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
W R G+RLHDNP+LL A+ N+ + + L P++I D VG NR +FL +SL
Sbjct: 8 WFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYNRMKFLLESL 67
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
ADLD++FR LG +L V +G V +F+ NIK L +E D EP K+RD V + +
Sbjct: 68 ADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDCEPIWKERDDAVAKLCRT 127
Query: 129 YKVKVEQHVSHTLYN 143
V+ ++VSHTL+N
Sbjct: 128 MDVRCVENVSHTLWN 142
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 258 (95.9 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 53/136 (38%), Positives = 84/136 (61%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRK-FMRVGPNRWRFLQQS 67
+H RKG+RLHDNP+LL A+ + L P+Y+LD F + M +G RWRFL QS
Sbjct: 27 IHLFRKGLRLHDNPSLLGAL------ASSSALYPVYVLDRVFLQGAMHMGALRWRFLLQS 80
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DLD + +A+GSRL+V+ G + ++ W I ++++ ++EPY + D ++ +A+
Sbjct: 81 LEDLDTRLQAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQTVAQ 140
Query: 128 EYKVKVEQHVSHTLYN 143
E ++ VSHTLY+
Sbjct: 141 ENGLQTYTCVSHTLYD 156
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 256 (95.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/137 (41%), Positives = 82/137 (59%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFR-KFMRVGPNRWRFLQQS 67
+H RKG+RLHDNPALL+A+ +E ++ P+YILD F M +G RW FL QS
Sbjct: 6 IHLFRKGLRLHDNPALLAALQ-SSE-----VVYPVYILDRAFMTSSMHIGALRWHFLLQS 59
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DL R LGS L V+QG+ E V D + WNI +T + ++EP+ K+ + + + +
Sbjct: 60 LEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGE 119
Query: 128 EYKVKVEQHVSHTLYNT 144
E +V + H+LYNT
Sbjct: 120 ELGFQVLSLMGHSLYNT 136
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 256 (95.2 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 57/137 (41%), Positives = 82/137 (59%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFR-KFMRVGPNRWRFLQQS 67
+H RKG+RLHDNPALL+A+ +E ++ P+YILD F M +G RW FL QS
Sbjct: 24 IHLFRKGLRLHDNPALLAALQ-SSE-----VVYPVYILDRAFMTSSMHIGALRWHFLLQS 77
Query: 68 LADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAK 127
L DL R LGS L V+QG+ E V D + WNI +T + ++EP+ K+ + + + +
Sbjct: 78 LEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGE 137
Query: 128 EYKVKVEQHVSHTLYNT 144
E +V + H+LYNT
Sbjct: 138 ELGFQVLSLMGHSLYNT 154
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 254 (94.5 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 56 VGPNRWRFLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYA 115
VG NRWRFL QSL DLD R L SRL+VV+G+P +VFP +FK W + LT+EYD EP+
Sbjct: 5 VGINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYDSEPFG 64
Query: 116 KKRDGLVEDMAKEYKVKVEQHVSHTLYN 143
K+RD + +AKE V+V SHTLY+
Sbjct: 65 KERDAAIIKLAKEAGVEVVIENSHTLYD 92
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 240 (89.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 57/143 (39%), Positives = 80/143 (55%)
Query: 3 GTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWR 62
G +VHW RKG+RLHDNPALL+A+ +G + + + +YILDP F VG NRWR
Sbjct: 36 GDGASSVHWFRKGLRLHDNPALLAAV-----RGAHCV-RCVYILDPWFAASSSVGINRWR 89
Query: 63 -FLQQSLADLDQKFRALGSRLYVVQGKPE-EVFPDIFKTWNIKLLTWEYDIEPYAKKRDG 120
+++Q + + R L P + P + W + LT+EYD EP+ K+RD
Sbjct: 90 RYVKQGVEIKETVLRKTSGNLVSCWKVPSSDSLPQ--QEWGVTRLTFEYDSEPFGKERDT 147
Query: 121 LVEDMAKEYKVKVEQHVSHTLYN 143
+ MAKE V+V SHTLY+
Sbjct: 148 AIMKMAKEAGVEVVTENSHTLYD 170
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 223 (83.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 53/141 (37%), Positives = 77/141 (54%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
V W R G+RLHDNPALL+A+ +K Q I L P++I D VG NR RFL SL
Sbjct: 8 VIWFRHGLRLHDNPALLAALA---DKDQGIALIPVFIFDGESAGTKNVGYNRMRFLLDSL 64
Query: 69 ADLDQKFRAL--G-SRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDM 125
D+D + +A G RL V +G+P +F + + + + E D EP +RD + +
Sbjct: 65 QDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSL 124
Query: 126 AKEYKVKVEQHVSHTLYNTNL 146
+E + + VSHTL++ L
Sbjct: 125 CRELNIDFVEKVSHTLWDPQL 145
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 222 (83.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 54/141 (38%), Positives = 79/141 (56%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
V W R G+RLHDNPALL+A+ EK Q I L P++I D VG NR RFL SL
Sbjct: 8 VLWFRHGLRLHDNPALLAALE---EKDQGIPLIPVFIFDGESAGTKSVGYNRMRFLLDSL 64
Query: 69 ADLDQKFRAL--G-SRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDM 125
DLD++ ++ G RL+V +G+P +F + + + + E D EP +RD +
Sbjct: 65 QDLDEQLQSATEGRGRLFVFEGEPTLIFRRLHEQVRLHKICAELDCEPIWNERDESARLL 124
Query: 126 AKEYKVKVEQHVSHTLYNTNL 146
+E ++ + VSHTL++ L
Sbjct: 125 CRELGIEYVEKVSHTLWDPRL 145
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 222 (83.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 47/139 (33%), Positives = 79/139 (56%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
++W R +RLHD+PAL +A++ +L P++ DPH+ R G NRW++L
Sbjct: 7 IYWFRTDLRLHDSPALQAALDL-----DPAVLWPIFTWDPHYVYRSRGGLNRWQYLLDCQ 61
Query: 69 ADLDQKFRALG--SRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMA 126
DL L S+L+V++ P+ +FP +FK W + L +E D + YA++RD +V+ A
Sbjct: 62 NDLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKKAA 121
Query: 127 KEYKVKVEQHVSHTLYNTN 145
+ VKV TL++++
Sbjct: 122 QAAGVKVITRYGRTLWDSD 140
>TAIR|locus:2061961 [details] [associations]
symbol:PHR2 "photolyase/blue-light receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0003913 "DNA photolyase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AC002535 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:AF053366 EMBL:AY087383
IPI:IPI00547753 PIR:T00425 RefSeq:NP_182281.1 UniGene:At.10721
UniGene:At.69338 ProteinModelPortal:Q8LB72 SMR:Q8LB72 STRING:Q8LB72
PaxDb:Q8LB72 PRIDE:Q8LB72 EnsemblPlants:AT2G47590.1 GeneID:819372
KEGG:ath:AT2G47590 GeneFarm:2668 TAIR:At2g47590
HOGENOM:HOG000240044 InParanoid:Q8LB72 OMA:TNWLMFE PhylomeDB:Q8LB72
ProtClustDB:CLSN2683619 Genevestigator:Q8LB72 GermOnline:AT2G47590
Uniprot:Q8LB72
Length = 447
Score = 161 (61.7 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 47/141 (33%), Positives = 73/141 (51%)
Query: 8 AVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPH-FRK----FMRVGPNRWR 62
AV W R +R+HDN L SA N++ ++L P+Y DP + K F + GP R +
Sbjct: 117 AVVWFRNDLRVHDNECLNSA----NDECVSVL--PVYCFDPRDYGKSSSGFDKTGPFRAQ 170
Query: 63 FLQQSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLV 122
FL +S+++L + +A GS L V GKPE V ++ K + ++ K +G +
Sbjct: 171 FLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKI 230
Query: 123 EDMAKEYKVKVEQHVSHTLYN 143
E KE V+V+ TLY+
Sbjct: 231 ETAMKEEGVEVKYFWGSTLYH 251
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 150 (57.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 41/139 (29%), Positives = 71/139 (51%)
Query: 12 IRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDP-HFR-----KFMRVGPNRWRFLQ 65
+R +RLHDN ++ ++I+ PLY DP H++ F + GP R RFL
Sbjct: 12 LRNDLRLHDN----EVFHWAQRNAEHII--PLYCFDPRHYQGTYHYNFPKTGPFRLRFLL 65
Query: 66 QSLADLDQKFRALGSRLYVVQGKPEEVFPDIFKTW-NIKLLTWEYDIEPYAKKRDGLVED 124
S+ DL + GS L V QGKPE+V ++ K ++ + + ++ K + +++
Sbjct: 66 DSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKE 125
Query: 125 MAKEYKVKVEQHVSHTLYN 143
+ + KV+V+ TLY+
Sbjct: 126 ICCQNKVRVQTFWGSTLYH 144
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 135 (52.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 9 VHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSL 68
+ W R+ +RL DNPAL+ A K + L+ PLYILD + M RW +L SL
Sbjct: 4 IFWFRQDLRLSDNPALVEAA-----KSADHLI-PLYILDDQLK--MLGDAQRW-WLHHSL 54
Query: 69 ADLDQKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
+ L G+ L + +G + V ++ K + ++ + W EP ++ D +E+
Sbjct: 55 SSLQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPP 114
Query: 129 YKVKV 133
V++
Sbjct: 115 LSVEI 119
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 118 (46.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 3 GTPECAVHWIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGP-NRW 61
G+ C++ W R+ +R+ DNPAL +A+ G I L ++ P G +RW
Sbjct: 9 GSGGCSIVWFRRDLRVEDNPALAAAVR----AGPVIAL---FVWAPEEEGHYHPGRVSRW 61
Query: 62 RFLQQSLADLDQKFRALGSRLYVVQGKPEEVFP--DIFKTWNIKLLTWEYDIEPYAKKRD 119
+L+ SLA LD R+LG+ L + + + V D+ K+ + + + +P + RD
Sbjct: 62 -WLKNSLAQLDSSLRSLGTCL-ITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRD 119
Query: 120 GLVEDMAKEYKVKVEQHVSHTLY 142
+D+ + V + LY
Sbjct: 120 HRAKDVLTAQGIAVRSFNADLLY 142
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/134 (26%), Positives = 65/134 (48%)
Query: 11 WIRKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFR-KFMRVGPNRWRFLQQSLA 69
W R+ +R+ DNPAL +A + +G + P++I P +F +RW +++QSLA
Sbjct: 10 WFRRDLRIEDNPALAAAAH----EGS---VFPVFIWCPEEEGQFYPGRASRW-WMKQSLA 61
Query: 70 DLDQKFRALGSRLYVVQGKPE-EVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKE 128
L Q +ALGS L +++ D + + + + +P + RD V++ E
Sbjct: 62 HLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVE 121
Query: 129 YKVKVEQHVSHTLY 142
+ V+ + LY
Sbjct: 122 RGISVQSYNGDLLY 135
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 102 (41.0 bits), Expect = 0.00081, P = 0.00081
Identities = 31/129 (24%), Positives = 61/129 (47%)
Query: 13 RKGMRLHDNPALLSAINYKNEKGQNILLKPLYILDPHFRKFMRVGPNRWRFLQQSLADLD 72
+K RL+DNPAL A + G+ + P+Y+ H F ++W +L ++ D+
Sbjct: 10 QKDFRLYDNPALFEAA----QSGEVV---PVYV---HDETFSMGSASKW-WLHHAIIDVK 58
Query: 73 QKFRALGSRLYVVQGKPEEVFPDIFKTWNIKLLTWEYDIEPYAKKRDGLVEDMAKEYKVK 132
++ ALGS L + +G +E + + I + W +P + + ++ M + +
Sbjct: 59 KQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHKGMI 118
Query: 133 VEQHVSHTL 141
++ SH L
Sbjct: 119 CKEFNSHLL 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 146 146 0.00079 103 3 11 22 0.45 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 602 (64 KB)
Total size of DFA: 166 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.28u 0.09s 16.37t Elapsed: 00:00:05
Total cpu time: 16.29u 0.09s 16.38t Elapsed: 00:00:05
Start: Thu Aug 15 11:12:23 2013 End: Thu Aug 15 11:12:28 2013