Query psy9353
Match_columns 543
No_of_seqs 453 out of 1980
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:59:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtx_A MRNA-capping enzyme; gu 100.0 3.2E-81 1.1E-85 646.2 23.3 317 223-542 3-323 (343)
2 3kyh_C MRNA-capping enzyme sub 100.0 2.9E-70 1E-74 578.3 27.3 314 225-542 8-388 (461)
3 1p16_A GTP--RNA, mRNA capping 100.0 2.7E-63 9.2E-68 525.4 32.6 316 223-542 3-359 (395)
4 1ckm_A MRNA capping enzyme; nu 100.0 2.7E-58 9.3E-63 475.4 23.5 289 222-542 14-312 (330)
5 1vs0_A Putative DNA ligase-lik 100.0 2.9E-29 1E-33 257.0 17.8 225 279-530 23-304 (310)
6 2cfm_A Thermostable DNA ligase 99.9 8.7E-28 3E-32 264.2 17.1 237 282-542 243-550 (561)
7 2c46_A MRNA capping enzyme; ph 99.9 1.3E-27 4.5E-32 236.2 15.2 161 30-190 37-214 (241)
8 1fvi_A Chlorella virus DNA lig 99.9 3.7E-27 1.3E-31 239.9 12.0 219 280-529 18-296 (297)
9 1x9n_A DNA ligase I; 5'-adenyl 99.9 1E-26 3.5E-31 260.2 16.3 243 278-541 327-666 (688)
10 2hiv_A Thermostable DNA ligase 99.9 2.1E-26 7.1E-31 255.6 17.1 238 282-542 274-605 (621)
11 3gde_A DNA ligase; DNA-binding 99.9 8.7E-26 3E-30 247.4 16.2 237 281-542 245-550 (558)
12 1yn9_A BVP, polynucleotide 5'- 99.9 6.1E-25 2.1E-29 205.3 14.6 151 25-176 7-169 (169)
13 3l2p_A DNA ligase 3; DNA ligas 99.9 3.2E-24 1.1E-28 235.8 21.4 238 281-542 247-576 (579)
14 1a0i_A DNA ligase; DNA replica 99.9 6.6E-24 2.3E-28 220.8 17.4 168 281-468 26-252 (348)
15 3v0d_A Voltage-sensor containi 99.9 2.2E-22 7.4E-27 207.5 12.9 152 13-174 18-182 (339)
16 3n0a_A Tyrosine-protein phosph 99.8 4.9E-21 1.7E-25 198.6 14.0 145 19-174 21-170 (361)
17 3s4o_A Protein tyrosine phosph 99.8 2.5E-19 8.7E-24 165.6 14.6 115 59-177 45-165 (167)
18 3rgo_A Protein-tyrosine phosph 99.8 3.5E-19 1.2E-23 163.3 14.7 119 59-179 26-148 (157)
19 3rz2_A Protein tyrosine phosph 99.8 4.5E-19 1.5E-23 168.6 15.5 142 34-180 32-175 (189)
20 1d5r_A Phosphoinositide phosph 99.8 1.7E-19 5.7E-24 185.8 11.6 153 14-176 11-171 (324)
21 1zzw_A Dual specificity protei 99.8 2.1E-18 7.2E-23 157.3 15.4 116 59-179 27-142 (149)
22 3ezz_A Dual specificity protei 99.8 7.6E-19 2.6E-23 159.3 11.0 111 59-177 27-138 (144)
23 1rxd_A Protein tyrosine phosph 99.8 3E-18 1E-22 157.1 14.4 117 59-180 38-154 (159)
24 4erc_A Dual specificity protei 99.8 2.2E-18 7.5E-23 156.8 13.4 115 59-179 33-147 (150)
25 2img_A Dual specificity protei 99.8 3.3E-18 1.1E-22 155.5 13.8 115 59-179 34-148 (151)
26 3s4e_A Dual specificity protei 99.8 5.1E-18 1.7E-22 154.0 13.0 113 59-178 27-139 (144)
27 1ohe_A CDC14B, CDC14B2 phospha 99.8 3.7E-18 1.3E-22 177.0 13.4 112 59-178 216-329 (348)
28 2oud_A Dual specificity protei 99.7 1.9E-17 6.5E-22 155.7 16.0 133 54-191 25-162 (177)
29 2e0t_A Dual specificity phosph 99.7 9E-18 3.1E-22 153.3 13.2 117 59-178 25-142 (151)
30 2nt2_A Protein phosphatase sli 99.7 1.3E-17 4.5E-22 151.4 14.0 112 59-178 27-139 (145)
31 3vnn_A DNA ligase 4; non-homol 99.7 7E-18 2.4E-22 152.6 11.6 96 283-382 1-126 (139)
32 3f81_A Dual specificity protei 99.7 1.3E-17 4.5E-22 157.2 13.7 116 59-177 51-171 (183)
33 2hcm_A Dual specificity protei 99.7 2.1E-17 7.1E-22 153.3 14.2 114 59-179 35-148 (164)
34 2hxp_A Dual specificity protei 99.7 9.1E-18 3.1E-22 154.5 11.5 114 59-179 29-144 (155)
35 3emu_A Leucine rich repeat and 99.7 2.9E-17 9.9E-22 152.2 12.7 112 59-179 33-146 (161)
36 1fpz_A Cyclin-dependent kinase 99.7 1.7E-17 5.7E-22 160.5 11.1 134 40-176 42-191 (212)
37 3cm3_A Late protein H1, dual s 99.7 4.8E-17 1.6E-21 152.7 13.4 116 58-180 51-173 (176)
38 2j16_A SDP-1, tyrosine-protein 99.7 3.2E-17 1.1E-21 155.0 11.8 112 60-178 64-175 (182)
39 2g6z_A Dual specificity protei 99.7 5.5E-17 1.9E-21 156.9 13.4 113 59-179 29-142 (211)
40 2r0b_A Serine/threonine/tyrosi 99.7 7.9E-17 2.7E-21 147.5 13.6 115 59-177 31-147 (154)
41 1wrm_A Dual specificity phosph 99.7 9.5E-17 3.3E-21 149.1 14.2 113 59-179 30-142 (165)
42 1yz4_A DUSP15, dual specificit 99.7 7.8E-17 2.7E-21 148.8 13.5 113 59-179 31-143 (160)
43 2esb_A Dual specificity protei 99.7 7.8E-17 2.7E-21 153.1 13.8 114 59-179 43-156 (188)
44 2wgp_A Dual specificity protei 99.7 1.3E-16 4.5E-21 151.8 13.2 113 59-179 49-162 (190)
45 2y96_A Dual specificity phosph 99.7 1.3E-16 4.4E-21 155.3 13.2 118 59-179 77-197 (219)
46 2i6j_A Ssoptp, sulfolobus solf 99.7 4.2E-17 1.4E-21 150.0 7.6 115 59-179 26-148 (161)
47 2q05_A Late protein H1, dual s 99.7 2.9E-16 9.8E-21 150.1 13.6 116 58-180 68-190 (195)
48 2pq5_A Dual specificity protei 99.7 5.4E-16 1.9E-20 149.3 13.7 116 59-179 69-189 (205)
49 3nme_A Ptpkis1 protein, SEX4 g 99.6 3.4E-15 1.2E-19 151.5 8.5 118 59-179 37-165 (294)
50 1xri_A AT1G05000; structural g 99.5 2.2E-15 7.5E-20 137.4 3.4 101 59-164 31-135 (151)
51 3mmj_A MYO-inositol hexaphosph 99.3 2E-11 6.8E-16 123.4 11.8 100 77-180 174-293 (314)
52 2f46_A Hypothetical protein; s 99.2 1E-10 3.6E-15 107.3 10.0 94 59-161 40-141 (156)
53 3f41_A Phytase; tandem repeat, 99.1 2.7E-10 9.4E-15 124.2 11.9 101 76-180 490-609 (629)
54 3f41_A Phytase; tandem repeat, 99.0 5E-10 1.7E-14 122.2 11.1 101 76-180 192-310 (629)
55 1fpr_A Protein-tyrosine phosph 99.0 3.3E-10 1.1E-14 114.2 8.7 85 85-169 167-261 (284)
56 1p15_A Protein-tyrosine phosph 99.0 2.2E-10 7.6E-15 113.6 6.8 94 85-178 140-242 (253)
57 2hc1_A Receptor-type tyrosine- 99.0 8E-10 2.7E-14 111.8 10.3 85 85-169 181-272 (291)
58 1g4w_R Protein tyrosine phosph 99.0 7.2E-10 2.5E-14 116.3 9.4 93 84-176 270-372 (383)
59 3b7o_A Tyrosine-protein phosph 99.0 1.7E-09 5.7E-14 110.7 11.3 90 85-174 202-301 (316)
60 2cm2_A Tyrosine-protein phosph 99.0 2.6E-09 8.8E-14 108.7 11.8 90 85-174 177-276 (304)
61 1jln_A STEP-like ptpase, prote 99.0 2.2E-09 7.7E-14 108.8 11.0 88 85-172 185-279 (297)
62 2b49_A Protein tyrosine phosph 98.9 2.3E-09 7.7E-14 108.3 10.4 87 85-173 175-267 (287)
63 4grz_A Tyrosine-protein phosph 98.9 3.2E-09 1.1E-13 107.2 11.3 86 85-170 169-264 (288)
64 2bzl_A Tyrosine-protein phosph 98.9 4.8E-09 1.6E-13 107.7 12.6 84 92-175 215-312 (325)
65 4az1_A Tyrosine specific prote 98.9 2.9E-09 9.8E-14 108.3 10.0 87 85-174 186-280 (302)
66 2oc3_A Tyrosine-protein phosph 98.9 5E-09 1.7E-13 106.6 11.6 88 85-173 191-287 (303)
67 3qwu_A DNA ligase; structural 98.9 1.1E-09 3.7E-14 112.6 6.3 166 260-445 52-234 (370)
68 2ooq_A Receptor-type tyrosine- 98.9 4.1E-09 1.4E-13 106.3 10.0 89 85-174 177-271 (286)
69 1wch_A Protein tyrosine phosph 98.9 6E-09 2.1E-13 106.5 11.3 86 86-174 207-298 (315)
70 2cjz_A Human protein tyrosine 98.9 5.8E-09 2E-13 106.1 11.0 89 85-173 193-289 (305)
71 2i75_A Tyrosine-protein phosph 98.9 9E-09 3.1E-13 105.4 12.4 88 85-173 202-295 (320)
72 1zc0_A Tyrosine-protein phosph 98.9 3.1E-09 1.1E-13 108.3 8.9 87 85-171 196-289 (309)
73 2p6x_A Tyrosine-protein phosph 98.9 5.8E-09 2E-13 106.3 10.6 87 85-172 185-280 (309)
74 1l8k_A T-cell protein-tyrosine 98.9 6.9E-09 2.4E-13 106.0 11.1 91 85-175 172-269 (314)
75 1yfo_A D1, receptor protein ty 98.8 6.8E-09 2.3E-13 105.5 9.9 87 85-172 190-282 (302)
76 2gjt_A Receptor-type tyrosine- 98.8 8.3E-09 2.8E-13 104.5 10.3 83 87-171 181-272 (295)
77 3m4u_A Tyrosine specific prote 98.8 7.2E-09 2.5E-13 105.5 9.7 87 85-174 189-283 (306)
78 3i36_A Vascular protein tyrosi 98.8 9.6E-09 3.3E-13 106.1 10.5 89 85-173 200-295 (342)
79 2i1y_A Receptor-type tyrosine- 98.8 8.1E-09 2.8E-13 104.9 9.8 87 85-172 189-282 (301)
80 3gxh_A Putative phosphatase (D 98.8 1.1E-08 3.7E-13 93.9 9.1 111 59-179 38-156 (157)
81 2h4v_A Receptor-type tyrosine- 98.8 1.8E-08 6E-13 103.3 10.4 89 85-174 211-305 (320)
82 2b3o_A Tyrosine-protein phosph 98.7 3.9E-08 1.3E-12 107.6 11.6 87 85-171 409-505 (532)
83 3s3e_A Tyrosine-protein phosph 98.7 3.2E-08 1.1E-12 100.7 9.9 80 92-172 208-292 (307)
84 1lar_A Protein (LAR); tyrosine 98.7 4.4E-08 1.5E-12 108.1 11.5 89 85-173 463-558 (575)
85 2jjd_A Receptor-type tyrosine- 98.7 4E-08 1.4E-12 108.9 10.8 88 85-172 482-575 (599)
86 4i8n_A Tyrosine-protein phosph 98.7 4.5E-08 1.5E-12 101.6 10.5 80 92-171 213-301 (354)
87 4ge6_A Tyrosine-protein phosph 98.7 6.7E-08 2.3E-12 98.7 11.3 81 91-171 192-289 (314)
88 1ygr_A CD45 protein tyrosine p 98.7 4.6E-08 1.6E-12 108.7 10.1 92 85-176 494-600 (610)
89 1lyv_A Protein-tyrosine phosph 98.7 7.1E-08 2.4E-12 98.1 10.6 92 85-177 184-295 (306)
90 1xk5_A Snurportin-1; protein-R 98.7 4.5E-07 1.5E-11 85.8 15.1 156 281-454 21-183 (204)
91 2shp_A SHP-2, SYP, SHPTP-2; ty 98.6 7.7E-08 2.6E-12 105.0 11.2 91 85-175 415-515 (525)
92 2vug_A PAB1020; RNA, ligase, A 98.6 2.4E-07 8.1E-12 97.0 14.0 159 260-438 73-242 (389)
93 3ps5_A Tyrosine-protein phosph 98.6 1.1E-07 3.7E-12 105.4 10.8 84 86-169 410-503 (595)
94 1ywf_A Phosphotyrosine protein 98.6 4.9E-08 1.7E-12 98.8 7.4 56 120-179 173-228 (296)
95 1lar_A Protein (LAR); tyrosine 98.6 1.8E-07 6.1E-12 103.3 11.8 84 85-169 174-263 (575)
96 2jjd_A Receptor-type tyrosine- 98.6 1.5E-07 5.1E-12 104.3 11.0 79 91-170 195-278 (599)
97 1ygr_A CD45 protein tyrosine p 98.5 1.7E-07 6E-12 104.0 9.3 84 85-169 188-277 (610)
98 3gjx_B Snurportin-1; transport 98.4 4.5E-06 1.5E-10 84.5 16.4 156 281-454 122-284 (365)
99 2nlk_A Protein tyrosine phosph 98.4 5.4E-07 1.9E-11 100.3 9.3 82 92-176 494-580 (627)
100 2nlk_A Protein tyrosine phosph 98.3 8.2E-07 2.8E-11 98.9 9.4 84 85-169 193-282 (627)
101 1ohe_A CDC14B, CDC14B2 phospha 97.2 0.00058 2E-08 70.4 7.9 68 93-161 49-121 (348)
102 1ta8_A DNA ligase, NAD-depende 96.5 0.0079 2.7E-07 61.2 9.4 153 282-455 114-317 (332)
103 1s68_A RNA ligase 2; ribonucle 96.4 0.027 9.4E-07 55.1 12.2 101 278-381 25-145 (249)
104 1b04_A Protein (DNA ligase); D 96.4 0.0073 2.5E-07 61.1 8.2 151 282-455 108-311 (318)
105 2hvq_A ORF1, hypothetical 37.6 95.9 0.067 2.3E-06 54.6 12.9 101 278-381 26-146 (335)
106 4glx_A DNA ligase; inhibitor, 94.2 1.2 4E-05 48.7 17.0 179 281-475 108-337 (586)
107 4glw_A DNA ligase; inhibitor, 93.6 0.32 1.1E-05 48.8 10.4 150 281-455 102-304 (305)
108 1zau_A DNA ligase; AMP; HET: D 92.9 0.013 4.3E-07 59.6 -1.2 154 281-455 116-326 (328)
109 2c46_A MRNA capping enzyme; ph 91.6 0.058 2E-06 52.4 1.7 51 13-63 80-130 (241)
110 2owo_A DNA ligase; protein-DNA 89.2 3.3 0.00011 45.9 13.2 174 282-475 109-337 (671)
111 3sgi_A DNA ligase; HET: DNA AM 89.1 2 6.9E-05 47.0 11.3 173 282-475 117-347 (615)
112 3jsl_A DNA ligase; NAD+-depend 89.0 1.8 6.1E-05 43.6 10.0 137 282-441 106-289 (318)
113 3uq8_A DNA ligase; adenylated 88.6 3.8 0.00013 41.3 12.1 156 282-456 108-316 (322)
114 1xdn_A RNA editing ligase MP52 88.1 3.1 0.0001 40.8 10.7 99 279-380 31-189 (277)
115 1dgs_A DNA ligase; AMP complex 85.8 6.6 0.00022 43.5 13.0 170 282-475 110-335 (667)
116 1vee_A Proline-rich protein fa 78.6 1.6 5.5E-05 37.7 3.8 28 119-149 73-100 (134)
117 1yn9_A BVP, polynucleotide 5'- 73.0 2.3 7.7E-05 38.2 3.4 45 13-58 53-97 (169)
118 3iwh_A Rhodanese-like domain p 52.0 14 0.00049 30.2 4.2 29 118-149 54-82 (103)
119 2fsx_A RV0390, COG0607: rhodan 50.2 15 0.00051 31.9 4.3 28 118-148 78-105 (148)
120 3gk5_A Uncharacterized rhodane 47.3 21 0.00072 29.1 4.6 28 118-148 53-80 (108)
121 3flh_A Uncharacterized protein 45.0 27 0.00093 29.2 5.0 29 118-148 69-98 (124)
122 3foj_A Uncharacterized protein 44.5 18 0.0006 29.0 3.6 28 118-148 54-81 (100)
123 2yf0_A Myotubularin-related pr 44.3 24 0.00083 37.7 5.5 25 119-143 328-352 (512)
124 1zsq_A Myotubularin-related pr 43.5 33 0.0011 36.7 6.4 24 120-143 341-364 (528)
125 2hhg_A Hypothetical protein RP 39.6 18 0.00062 30.7 3.1 29 118-149 84-112 (139)
126 1lw3_A Myotubularin-related pr 37.8 45 0.0015 36.6 6.4 24 120-143 413-436 (657)
127 1qxn_A SUD, sulfide dehydrogen 36.9 25 0.00084 30.2 3.5 28 118-148 80-107 (137)
128 3eme_A Rhodanese-like domain p 35.1 39 0.0013 27.0 4.3 28 118-148 54-81 (103)
129 3hzu_A Thiosulfate sulfurtrans 30.3 67 0.0023 31.7 5.9 77 63-149 56-138 (318)
130 2jtq_A Phage shock protein E; 29.9 58 0.002 24.9 4.3 29 118-149 39-67 (85)
131 3i2v_A Adenylyltransferase and 29.9 52 0.0018 27.0 4.4 23 121-145 73-95 (127)
132 1e0c_A Rhodanese, sulfurtransf 28.8 46 0.0016 31.7 4.3 29 118-149 221-249 (271)
133 1gmx_A GLPE protein; transfera 28.4 1E+02 0.0034 24.7 5.8 28 118-148 56-83 (108)
134 2plc_A PI-PLC, phosphatidylino 28.3 27 0.00091 34.0 2.5 50 83-132 56-110 (274)
135 2k0z_A Uncharacterized protein 27.8 59 0.002 26.4 4.3 29 118-149 54-82 (110)
136 1uar_A Rhodanese; sulfurtransf 27.2 52 0.0018 31.5 4.4 28 118-148 231-259 (285)
137 3hix_A ALR3790 protein; rhodan 27.2 38 0.0013 27.3 2.9 29 118-149 50-78 (106)
138 4f67_A UPF0176 protein LPG2838 25.2 56 0.0019 31.7 4.1 72 60-148 135-206 (265)
139 2ns5_A Partitioning-defective 24.9 1.5E+02 0.005 23.6 5.7 42 85-130 11-58 (85)
140 3v1h_A 1-phosphatidylinositol 24.2 31 0.0011 34.3 2.1 50 83-132 57-115 (306)
141 3ilm_A ALR3790 protein; rhodan 24.0 48 0.0016 28.5 3.1 29 118-149 54-82 (141)
142 1e0c_A Rhodanese, sulfurtransf 23.0 1.3E+02 0.0043 28.5 6.2 46 98-149 63-108 (271)
143 3d1p_A Putative thiosulfate su 22.4 89 0.0031 26.3 4.5 29 118-149 89-117 (139)
144 2rpq_B Activating transcriptio 20.7 29 0.00099 24.2 0.7 22 2-23 17-38 (49)
No 1
>3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A
Probab=100.00 E-value=3.2e-81 Score=646.20 Aligned_cols=317 Identities=50% Similarity=0.905 Sum_probs=223.1
Q ss_pred CCCCCccCCCC--cceeccChHHHHHHHHHHHHHhCCCCCCCCCCeeeccccccccccccCCcEEEEcCCceEEEEEEEe
Q psy9353 223 AKNPTFMPGVS--GVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYIKN 300 (543)
Q Consensus 223 ~~~~~~~~~v~--g~~~~~d~~~~~~l~~~v~~~~~~~~~~FPG~qPVsl~r~~l~~l~~~~y~v~~K~DG~R~ll~i~~ 300 (543)
..+++||||+| ||++++|++.+.+||++|++||||+..+|||||||||+|+||+.|.+++|+|||||||+|+||++.+
T Consensus 3 ~~~~~f~~~~~v~gv~~v~~~~~~~~l~~~v~~~~~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~ 82 (343)
T 3rtx_A 3 KLGAIFLEGITVKGVTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDG 82 (343)
T ss_dssp CTTCCSSSSSCCTTEEECCCTTHHHHHHHHHHHHTTCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECS
T ss_pred ccCCeecCCcccCCeEEeCChHHHHHHHHHHHHHhCCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEc
Confidence 34799999987 9999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred CCeEEEEECCCCeeEecCccCCCCCCCCcCCCCeEEEEEEEEeccCCccccEEEEEEEEEECCccccCCCHHHHHHHHHH
Q psy9353 301 ADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRVQGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKV 380 (543)
Q Consensus 301 ~~~vyLidR~~~~~~v~~~~fP~~~~~~~~~~~tlLDGElV~d~~~~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~ 380 (543)
++++||+||+|+++.+++.+||+..++..+..+||||||||+++.+|...++|+|||+|+++|++++++||.+|+++|++
T Consensus 83 ~~~v~L~sR~~~~~~~~~~~FP~~~~~~~~~~~tvLDGElV~~~~~g~~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~ 162 (343)
T 3rtx_A 83 TNEVFMIDRDNSVFHVSNLEFPFRKDLRMHLSNTLLDGEMIIDKVNGQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIER 162 (343)
T ss_dssp TTCEEEECTTCCEEEETTCCCEETTEEEEECCSEEEEEEEEEEESSSSEEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCeEEeccccCCcchhhhccCCCeEEEEEEEEecCCCcEeeEEEEEEEEeECCcCcccCCHHHHHHHHHH
Confidence 57999999999999887789998766544568999999999987677777899999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc--cccCCceEEEeeCCCCcccCCCcceEEecCCcce
Q psy9353 381 EIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT--LCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMN 458 (543)
Q Consensus 381 ~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~--~~h~~DGLIf~~~~spY~~G~~~~~lKWKp~~~n 458 (543)
+|+.|+.++++++++....+||.|+.|+||++++++++|++.+. +.|++|||||||.+ ||.+||+++||||||+++|
T Consensus 163 ~i~~p~~~~~~~~~~~~~~~pf~vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~ 241 (343)
T 3rtx_A 163 EIISPRHEKMKTGLIDKTQEPFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLN 241 (343)
T ss_dssp HTHHHHHHHHHHSSCCTTTSSSEEEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTC
T ss_pred HhhhHHHHHhhcccccccCCCcEEEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcce
Confidence 99999999999999888999999999999999999999953455 89999999999998 9999999999999999999
Q ss_pred eEEEEEEEEeecCCCccccceeeEeeccCCcccccceeEEcccccccCCcEEEEEEeCCeeEEEEeeCCCCCCChHHHHH
Q psy9353 459 SIDFLMKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFMRERTDKSFPNAVETAM 538 (543)
Q Consensus 459 tvDF~l~~~~~~~~g~~~~~~~~L~v~~~~~~~~f~~~~~t~e~~~~~g~IvEc~~~~g~W~f~R~R~DK~~pN~~~t~~ 538 (543)
||||+|++....+.|++|..++.|||++. ++||+.|++|++++++||+||||+|++|+|+|||+|+||++||+++||.
T Consensus 242 tvDF~l~~~~~~~~g~~~~~~~~l~~~g~--~~~f~~~~~t~~l~~ld~~IvEC~~~~~~W~~~R~R~DK~~pN~~~tv~ 319 (343)
T 3rtx_A 242 SVDFRLKITRMGGEGLLPQNVGLLYVGGY--ERPFAQIKVTKELKQYDNKIIECKFENNSWVFMRQRIDKSFPNAYNTAM 319 (343)
T ss_dssp C-------------------------------------------------------------------------CHHHHH
T ss_pred EEEEEEEecccCCCCccccccceEEECCe--eeecceeeccccchhcCCEEEEEEEECCEEEEEEEcCCCCCCchHHHHH
Confidence 99999999887788899999999999876 7899999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy9353 539 GEWN 542 (543)
Q Consensus 539 ~v~~ 542 (543)
+||+
T Consensus 320 ~v~~ 323 (343)
T 3rtx_A 320 AVCN 323 (343)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 2
>3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-70 Score=578.33 Aligned_cols=314 Identities=28% Similarity=0.474 Sum_probs=268.6
Q ss_pred CCCccCCCCcceeccChHHHHHHHHHHHHHhCCCCC--CCCCCeeeccccccc-cccccCCcEEEEcCCceEEEEEEEe-
Q psy9353 225 NPTFMPGVSGVKALYDEDKIVQLQNEIKDLCNYERV--GFPGSQPVSMDRNNI-GYLAEKKYMVSWKADGTRYMMYIKN- 300 (543)
Q Consensus 225 ~~~~~~~v~g~~~~~d~~~~~~l~~~v~~~~~~~~~--~FPG~qPVsl~r~~l-~~l~~~~y~v~~K~DG~R~ll~i~~- 300 (543)
+..-+++|||+.+ +++.+.+||++|++||||+.. +|||||||||+|+|| ..|..++|+|||||||+||||++..
T Consensus 8 ~~~~~p~~pG~~~--~~~~~~~lr~~v~~l~~~~~~~~~FPGsqPVS~~r~nl~~~L~~~dY~V~eK~DGiR~Ll~i~~~ 85 (461)
T 3kyh_C 8 ESRVAPEIPGLIQ--PGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVIN 85 (461)
T ss_dssp -----CCCSSCBC--CSHHHHHHHHHHHHHTTSCGGGSSCSSCEEEECCHHHHHHTTSSSCEEEEEEECSEEEEEEEEEC
T ss_pred ccCCCCCCCCccc--CHHHHHHHHHHHHHHHCCCCCCCcCCCCcceeecHhhHHHHhccCCEEEEEcccceEEEEEEecc
Confidence 3444678999976 467899999999999999876 999999999999999 6799999999999999999999973
Q ss_pred ----CCeEEEEECCCCeeEecCccCCCCCC------CCcCCCCeEEEEEEEEeccC--CccccEEEEEEEEEECCccccC
Q psy9353 301 ----ADEIYFTDRDFSMYKISGLTFPHRKD------PNKRLTNTLLDGEMVIDRVQ--GQNIPRYLVYDIIRFDNNDVTR 368 (543)
Q Consensus 301 ----~~~vyLidR~~~~~~v~~~~fP~~~~------~~~~~~~tlLDGElV~d~~~--~~~~~~ylifDil~~~G~~v~~ 368 (543)
+++|||+||+|+++.+++++||+..+ +...+.+||||||||+++.+ +..+++|+|||||+++|+++++
T Consensus 86 ~~~g~g~v~LidR~~~~~~v~~~~FP~~~~~~~~~~l~~~~~~TlLDGElV~d~~~~~~~~~~~y~~FDlL~~~G~dl~~ 165 (461)
T 3kyh_C 86 PVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQ 165 (461)
T ss_dssp TTTCCEEEEEECSSSCEEEECCCCCCCCSSCCSSGGGTCCCCSEEEEEEEEEEECTTTCCEEEEEEEEEEEEETTEECSS
T ss_pred ccCCCceEEEEeCCCCeEEcccccCCcccccchhhhhhccCCCeEEEEEEEeccCCCCCccceEEEEEEEEeECCcCccc
Confidence 36899999999999988899998765 34567899999999998643 4567899999999999999999
Q ss_pred CCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc-cccCCceEEEeeCCCCccc-CCC
Q psy9353 369 QKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT-LCHEPDGLIFQPVDEPYVM-GKA 446 (543)
Q Consensus 369 ~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~-~~h~~DGLIf~~~~spY~~-G~~ 446 (543)
+||.+|+++|++.|+.|+...++.+++....+||.|+.|+|+.++.++++|+ ... +.|++||||||+.++||.+ ||+
T Consensus 166 ~pl~eR~~~Le~~I~~P~~~~~~~~p~~~~~~pF~V~~K~~~~~~~~~~l~~-~~~~l~~~~EGLv~k~~~spY~~Ggr~ 244 (461)
T 3kyh_C 166 SPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAK-SLDKLPHLSDGLIFTPVKAPYTAGGKD 244 (461)
T ss_dssp SBHHHHHHHHHHTTHHHHHHHHHHCSTTCSCCCSEEEECCCEEGGGHHHHHH-HHTTCSSCEEEEEEEESSSBCCSSSEE
T ss_pred CCHHHHHHHHHHHhcccchhhhhccccccccCCcEEEeccchhhhhHHHHHH-hhhhccCCCCeEEEEeCCCCCcCCCcC
Confidence 9999999999999999998888888888889999999999999999999987 233 8999999999999999999 699
Q ss_pred cceEEecCCcceeEEEEEEEEee--cCCCcccc---------c----eeeEee--ccC----------------------
Q psy9353 447 VDTLKWKPHTMNSIDFLMKIETR--SGLGILPT---------K----VGKLYA--GSN---------------------- 487 (543)
Q Consensus 447 ~~~lKWKp~~~ntvDF~l~~~~~--~~~g~~~~---------~----~~~L~v--~~~---------------------- 487 (543)
..||||||+++|||||+|++... .+.++ |. + ++.||| |+.
T Consensus 245 ~~~lKwKp~~~nTVDF~L~i~~~~~~~~~~-~~~~~~~~y~dy~~~p~~~L~v~~gg~~~~~~~~~~~~~f~~~~~~~l~ 323 (461)
T 3kyh_C 245 SLLLKWKPEQENTVDFKLILDIPMVEDPSL-PKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILE 323 (461)
T ss_dssp EEEEECCCTTTCCCEEEEECCCC-------------------CCSCCCCEEEEECTTCHHHHHHHHTTCSCTTTTHHHHT
T ss_pred CCeEEEEcCCCeeEEEEEEecccccCCCcc-cccccccccccccccceeEEEEEeCCcccccccccccccccchhhhccc
Confidence 99999999999999999998752 22222 22 1 678888 551
Q ss_pred CcccccceeEEccc----c----cccCCcEEEEEEe--CCeeEEEEeeCCCCCCChHHHHHHhhc
Q psy9353 488 RSQQQFAEMKITKA----T----KDLDGKIVECKWE--NNQWVFMRERTDKSFPNAVETAMGEWN 542 (543)
Q Consensus 488 ~~~~~f~~~~~t~e----~----~~~~g~IvEc~~~--~g~W~f~R~R~DK~~pN~~~t~~~v~~ 542 (543)
+.+.+|+.|++|++ + .++||+||||+|+ +|+|+|||+|+||++||+++||.+||+
T Consensus 324 ~~~~~f~~l~~t~~ew~~lk~~~~~ld~~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~vle 388 (461)
T 3kyh_C 324 RTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLE 388 (461)
T ss_dssp TTEEEEEECCCCTTTHHHHHHSCCCCTTEEEEECCCTTTSSCCEEEECTTSSSCCCHHHHHHHHH
T ss_pred ccceecceeeecHHHHHHHhhccCCCCCEEEEEEEeCCCCeEEEEEECCCCCCCCchHHHHHHHH
Confidence 23557899999987 3 4699999999999 799999999999999999999999986
No 3
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=100.00 E-value=2.7e-63 Score=525.36 Aligned_cols=316 Identities=28% Similarity=0.523 Sum_probs=268.3
Q ss_pred CCCCCccCCCCcceeccChHHHHHHHHHHHHHhCCCCCCCCCCeeeccccccc-cccccCCcEEEEcCCceEEEEEEE--
Q psy9353 223 AKNPTFMPGVSGVKALYDEDKIVQLQNEIKDLCNYERVGFPGSQPVSMDRNNI-GYLAEKKYMVSWKADGTRYMMYIK-- 299 (543)
Q Consensus 223 ~~~~~~~~~v~g~~~~~d~~~~~~l~~~v~~~~~~~~~~FPG~qPVsl~r~~l-~~l~~~~y~v~~K~DG~R~ll~i~-- 299 (543)
+.++.+|++|||+++ +++.+.+||++|+++|+|+..+|||+|||||+++|+ +.|...+|+||||+||+|++|++.
T Consensus 3 ~~~~~~~~~i~g~~~--~~~~~~~l~~~v~~l~~~~~~~FPg~~Pvsl~~~~l~~~l~~~~~~ve~K~DG~R~ll~~~~~ 80 (395)
T 1p16_A 3 QLEEREIPVIPGNKL--DEEETKELRLMVAELLGRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLIND 80 (395)
T ss_dssp BCSCCCCCCCSSEEC--CHHHHHHHHHHHHHHHTCSCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEE
T ss_pred cCCCCCCCCCCCCcC--CHHHHHHHHHHHHHHHCCCCCCCCCCceecccHHHHHHhhCcCCEEEEECccceEEEEEEeec
Confidence 344577899999976 888999999999999999999999999999999999 778888999999999999999993
Q ss_pred --eCCeEEEEECCCCeeEecCccCCCCCCCC----cCCCCeEEEEEEEEecc-CCccccEEEEEEEEEECCccccCCCHH
Q psy9353 300 --NADEIYFTDRDFSMYKISGLTFPHRKDPN----KRLTNTLLDGEMVIDRV-QGQNIPRYLVYDIIRFDNNDVTRQKFT 372 (543)
Q Consensus 300 --~~~~vyLidR~~~~~~v~~~~fP~~~~~~----~~~~~tlLDGElV~d~~-~~~~~~~ylifDil~~~G~~v~~~p~~ 372 (543)
..+++||++|+|+++.+++.+||+..++. ..+.+|+||||||+++. +++.+++|+|||||+++|++++++||.
T Consensus 81 ~~~g~~v~L~sR~~~~~~i~~~~FP~~~~~~~~~~~~~~~~vLDGElV~~~~~~~~~~~~f~~FDlL~~~G~dl~~~pl~ 160 (395)
T 1p16_A 81 PDKGEGVFLVTRENDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENRNVSEPVLRYVIFDALAIHGKCIIDRPLP 160 (395)
T ss_dssp TTTEEEEEEEETTCCEEECCSCCCCSCTTCCSSSCCCCSSEEEEEEEEEECCSSSCCEEEEEEEEEEEETTEECTTSCHH
T ss_pred ccCCCEEEEEeCCCceEEeccccCCcccccccchhccCCcceeeeEEEEeccCCCcceeEEEEEEEEEECCeEcccCCHH
Confidence 12579999999999988778999876543 34678999999999865 245678999999999999999999999
Q ss_pred HHHHHHHHhhhhhhHHHhhhhc--cccCCCCeEEEeccccchhhHhhhhccccc-cccCCceEEEeeCCCCcccCCCcce
Q psy9353 373 TRIQIIKVEIIEPRHRAMENSR--INKLAEPFSVRVKDFWSVDKAGYLLSDKFT-LCHEPDGLIFQPVDEPYVMGKAVDT 449 (543)
Q Consensus 373 eR~~~L~~~i~~p~~~~~~~~~--~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~-~~h~~DGLIf~~~~spY~~G~~~~~ 449 (543)
+|+++|+++++.|+...+..++ .....+||.|+.+++++++.++++|+ .+. +.|++||||||+.++||.+|++..|
T Consensus 161 eR~~~L~~~i~~~~~~~~~~~~~~~~~~~~pf~v~~~~~~~~~~~~~~~~-~~~~~~~g~EGlI~K~~ds~Y~~Gr~~~w 239 (395)
T 1p16_A 161 KRLGYITENVMKPFDNFKKHNPDIVNSPEFPFKVGFKTMLTSYHADDVLS-KMDKLFHASDGLIYTCAETPYVFGTDQTL 239 (395)
T ss_dssp HHHHHHHHHTHHHHHHHHHHCHHHHSCTTSCCEEEECCCEEGGGTHHHHT-TGGGCSSCEEEEEEEESSSCCCSEEEEEE
T ss_pred HHHHHHHHHhhcccHhhhhcCccccccccCceEEEEecchhHHHHHHHHH-HHHhcCCCCCeEEEEeCCCCcCCCCccce
Confidence 9999999988888766554333 56678899999999999999899997 454 7899999999999999999999999
Q ss_pred EEecCCcceeEEEEEEEEee---c----CCC---------cccc-ceeeEeeccCCcccccceeEEccc--------ccc
Q psy9353 450 LKWKPHTMNSIDFLMKIETR---S----GLG---------ILPT-KVGKLYAGSNRSQQQFAEMKITKA--------TKD 504 (543)
Q Consensus 450 lKWKp~~~ntvDF~l~~~~~---~----~~g---------~~~~-~~~~L~v~~~~~~~~f~~~~~t~e--------~~~ 504 (543)
|||||++.+||||+|.+... . +.| ..|. ...++|.++. ..+||+.+++|++ .++
T Consensus 240 lKwK~~~~~TvDfvl~~~~~~~~~~~~~g~G~~~~~~dy~~~p~~~~l~v~~~~~-~~~~f~~~~ltd~e~~~l~~~~~~ 318 (395)
T 1p16_A 240 LKWKPAEENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSN-VHTDFAKLDLSDDDWERLKALEQP 318 (395)
T ss_dssp EEECCGGGCCEEEEEEEECEEEECTTSCTTSTTCEEEECSSCCSEEEEEEECSTT-CEEEEEEECCCHHHHHHHHHSSSC
T ss_pred EEEecCCCeEEEEEEEEEecccccccccccCccccccccccccceeEEEEEeCCc-ccceeeEEEeCHHHHHHhHhhccc
Confidence 99999999999999987642 1 222 2333 2223444543 3679999999875 367
Q ss_pred cCCcEEEEEEe---CCeeEEEEeeCCCCCCChHHHHHHhhc
Q psy9353 505 LDGKIVECKWE---NNQWVFMRERTDKSFPNAVETAMGEWN 542 (543)
Q Consensus 505 ~~g~IvEc~~~---~g~W~f~R~R~DK~~pN~~~t~~~v~~ 542 (543)
++|+||||.|+ +|.|+|+|+|+||+.||+++||.+||+
T Consensus 319 ~~~~IvEc~~~~~~~g~wr~~R~R~DK~~pN~~~t~~~vl~ 359 (395)
T 1p16_A 319 LQGRIAECRQSTTKKGYWEMLRFRNDKSNGNHISVVEKILV 359 (395)
T ss_dssp CTTCEEEEEECSSSTTEEEEEEECTTCSSCCBHHHHHHHHH
T ss_pred CCCEEEEEEeecCCCCccEEEEEeCCCCCcChHHHHHHHHH
Confidence 89999999997 799999999999999999999999986
No 4
>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B*
Probab=100.00 E-value=2.7e-58 Score=475.43 Aligned_cols=289 Identities=24% Similarity=0.422 Sum_probs=245.2
Q ss_pred cCCCCCccCC-CCcceeccChHHHHHHHHHHHH--HhCCCCCCCCCCeeeccccccccccccCCcEEEEcCCceEEEEEE
Q psy9353 222 IAKNPTFMPG-VSGVKALYDEDKIVQLQNEIKD--LCNYERVGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYI 298 (543)
Q Consensus 222 ~~~~~~~~~~-v~g~~~~~d~~~~~~l~~~v~~--~~~~~~~~FPG~qPVsl~r~~l~~l~~~~y~v~~K~DG~R~ll~i 298 (543)
.++.+.||+| ++|++.++++ .+.+++++++. +|+|+..+|||+|||||+++|++.|...+|+||||+||+|++|++
T Consensus 14 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Fpg~~Pv~~~~~~~~~L~~~~y~ve~K~DG~R~ll~~ 92 (330)
T 1ckm_A 14 TERAVLTLNGLQIKLHKVVGE-SRDDIVAKMKDLAMDDHKFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFF 92 (330)
T ss_dssp EEEEEEEETTEEEEEEEECHH-HHHHHHHHHHHHTTCCCSSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEE
T ss_pred ecccccccCCcccccccCCch-hhHHHHHHHHHhhhcCCCCCCCCCCceeCcchHHHhhCCcCCEEEEECcceEEEEEEE
Confidence 4677899999 5699998865 55556666664 599999999999999999999999988899999999999999999
Q ss_pred E---eCCeEEEEECCCCeeEecCccCCCCCCCCcCCCCeEEEEEEEEeccCCccccEEEEEEEEEECCccccCCCHHHHH
Q psy9353 299 K---NADEIYFTDRDFSMYKISGLTFPHRKDPNKRLTNTLLDGEMVIDRVQGQNIPRYLVYDIIRFDNNDVTRQKFTTRI 375 (543)
Q Consensus 299 ~---~~~~vyLidR~~~~~~v~~~~fP~~~~~~~~~~~tlLDGElV~d~~~~~~~~~ylifDil~~~G~~v~~~p~~eR~ 375 (543)
+ +++++||+||+++.+.+ .||+.. ...+.+|+||||||+++.+++ ++|+|||||+++|++++++||.+|+
T Consensus 93 ~~~~g~g~v~L~sR~~~~~t~---~fp~~~--~~~~~~~vLDGElv~~~~~~~--~~f~vFDlL~~~G~dl~~~pl~eRr 165 (330)
T 1ckm_A 93 TRVFGFKVCTIIDRAMTVYLL---PFKNIP--RVLFQGSIFDGELCVDIVEKK--FAFVLFDAVVVSGVTVSQMDLASRF 165 (330)
T ss_dssp EEETTEEEEEEECTTCCEEEC---CCSCCC--TTGGGCEEEEEEEEEETTTTE--EEEEEEEEEEETTEECTTSCHHHHH
T ss_pred EecCCCCEEEEEeCCCCEEec---cChhhh--hccCCCeeEEEEEEEEcCCCe--EEEEEEeeeeeCCcccccCCHHHHH
Confidence 7 34679999999998854 577653 234579999999999865443 8999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc--ccc--CCceEEEeeCCCCcccCCCcceEE
Q psy9353 376 QIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT--LCH--EPDGLIFQPVDEPYVMGKAVDTLK 451 (543)
Q Consensus 376 ~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~--~~h--~~DGLIf~~~~spY~~G~~~~~lK 451 (543)
++|++.+.. .......||.|+.+++++. .++++|+ .+. +.| +.||||||+.++||.+||+..|||
T Consensus 166 ~~L~~~l~~---------~~~~~~~~~~i~~~~~~~~-~~~~~~~-~~~~~~~~~yg~EGlI~K~~dspY~~Gr~~~~lK 234 (330)
T 1ckm_A 166 FAMKRSLKE---------FKNVPEDPAILRYKEWIPL-EHPTIIK-DHLKKANAIYHTDGLIIMSVDEPVIYGRNFNLFK 234 (330)
T ss_dssp HHHHHHHTT---------CCCCTTSSSEEEECCCEET-TCHHHHH-HHHHHHHHHSCEEEEEEEESSSCCCCEEEEEEEE
T ss_pred HHHHHHHhh---------hcccCCCCeEEEEEEEEeh-hHHHHHH-HHHHHHhccCCCceEEEeeCCCcccCCCccCeEE
Confidence 999987631 1122456899999999998 8888886 333 778 999999999999999999999999
Q ss_pred ecCCcceeEEEEEEEEeecCCCccccceeeEeeccCCcccccceeEEcccccccCCcEEEEEEeCCeeEEEEeeCCCCCC
Q psy9353 452 WKPHTMNSIDFLMKIETRSGLGILPTKVGKLYAGSNRSQQQFAEMKITKATKDLDGKIVECKWENNQWVFMRERTDKSFP 531 (543)
Q Consensus 452 WKp~~~ntvDF~l~~~~~~~~g~~~~~~~~L~v~~~~~~~~f~~~~~t~e~~~~~g~IvEc~~~~g~W~f~R~R~DK~~p 531 (543)
|||++.+|+||+|. .++| ...||+++.+..+||+.++ +++ ++|+||||.|++|.|+|+|+|+||+.|
T Consensus 235 wK~~~~~tvDfvi~----~g~g-----~~gl~~~~~~~~vp~~~~~--k~~--~~g~IvE~~~~~G~wr~~R~R~DK~~~ 301 (330)
T 1ckm_A 235 LKPGTHHTIDFIIM----SEDG-----TIGIFDPNLRKNVPVGKLD--GYY--NKGSIVECGFADGTWKYIQGRSDKNQA 301 (330)
T ss_dssp ECSTTCCCEEEEEC----STTC-----CEEEEETTTTEEEECCCCS--SCC--CTTCEEEEEEETTEEEEEEECTTCSSC
T ss_pred EEeCCCceEEEEEE----ccCC-----eEEEEeCCCCceeeeeeee--hhh--cCCeEEEEEEECCceEEEEEeCCCCCC
Confidence 99999999999987 3455 3466998765688999876 444 799999999999999999999999999
Q ss_pred ChHHHHHHhhc
Q psy9353 532 NAVETAMGEWN 542 (543)
Q Consensus 532 N~~~t~~~v~~ 542 (543)
|+++|+++|++
T Consensus 302 n~~~t~~~v~~ 312 (330)
T 1ckm_A 302 NDRLTYEKTLL 312 (330)
T ss_dssp CBHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999986
No 5
>1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2.9e-29 Score=257.02 Aligned_cols=225 Identities=17% Similarity=0.243 Sum_probs=157.0
Q ss_pred ccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCCCcCC--CCeEEEEEEEEeccCCc--------
Q psy9353 279 AEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNKRL--TNTLLDGEMVIDRVQGQ-------- 348 (543)
Q Consensus 279 ~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~~~~~--~~tlLDGElV~d~~~~~-------- 348 (543)
...+|+++||+||+|++++++ .++++|+||+++.+ +..||+..++...+ .+++||||||+...+|.
T Consensus 23 ~~~~~~~E~K~DG~R~~~~~~-~g~v~l~SR~g~~~---t~~fPel~~~~~~l~~~~~iLDGElv~~d~~g~~~F~~l~~ 98 (310)
T 1vs0_A 23 KASQWAFEGXWDGYRLLVEAD-HGAVRLRSRSGRDV---TAEYPQLRALAEDLADHHVVLDGEAVVLDSSGVPSFSQMQN 98 (310)
T ss_dssp CTTTEEEEEECCSEEEEEEEE-TTEEEEEETTCCBC---GGGCGGGHHHHHHTTTCEEEEEEEEECBCTTSCBCHHHHHT
T ss_pred CCCCEEEEEccCcEEEEEEEE-CCEEEEEcCCCCCc---hhhchhHHHHHHhCCCccEEEeeEEEEECCCCCcCHHHHHh
Confidence 356899999999999999996 47999999999977 46899764432223 37999999999532221
Q ss_pred ----cccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccchhhHhhhhccccc
Q psy9353 349 ----NIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVDKAGYLLSDKFT 424 (543)
Q Consensus 349 ----~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~~~~~ll~~~~~ 424 (543)
..++|++||||++||++++++||.+|+++|++.+... . +...+++.. .++++|+. .
T Consensus 99 r~~~~~~~~~vFDll~~~g~~l~~~pl~eRr~~L~~~~~~~--------~---------i~~~~~~~~-~~~~~~~~--~ 158 (310)
T 1vs0_A 99 RGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANAT--------S---------LTVPELLPG-DGAQAFAC--S 158 (310)
T ss_dssp CCTTSCCEEEEEEEEEETTEECTTSCHHHHHHHHHHHHHHS--------C---------CCCCCCCCS-SHHHHHHH--H
T ss_pred hccCCcEEEEEEEeEEECCcCcccCCHHHHHHHHHHhccCC--------c---------EEECccCch-HHHHHHHH--H
Confidence 2479999999999999999999999999999866321 1 112222322 34566652 3
Q ss_pred cccCCceEEEeeCCCCcccC-CCcceEEecCCcceeEEEEEEEEeecCCCccccceeeEeeccC--Cccccccee--EEc
Q psy9353 425 LCHEPDGLIFQPVDEPYVMG-KAVDTLKWKPHTMNSIDFLMKIETRSGLGILPTKVGKLYAGSN--RSQQQFAEM--KIT 499 (543)
Q Consensus 425 ~~h~~DGLIf~~~~spY~~G-~~~~~lKWKp~~~ntvDF~l~~~~~~~~g~~~~~~~~L~v~~~--~~~~~f~~~--~~t 499 (543)
+.++.||||+|+.++||.+| |+.+|+|||+. +|+||+| +....+.|.....+|.|.++-. ++.++++.+ ++|
T Consensus 159 ~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~--~~~D~vv-~G~~~g~G~r~g~~g~lllg~~d~~g~~~vgkvgtGft 235 (310)
T 1vs0_A 159 RKHGWEGVIAKRRDSRYQPGRRCASWVKDKHW--NTQEVVI-GGWRAGEGGRSSGVGSLLMGIPGPGGLQFAGRVGTGLS 235 (310)
T ss_dssp HHTTCCEEEEEETTCCCCTTCEEEEEEEEESS--EEEEEEE-EEEEC--------CCEEEEEEEETTEEEEEEEECSSCC
T ss_pred HHcCCceEEEeCCCCCcCCCCcChHHhccchh--eEEEEEE-EEEEcCCCCccCccceEEEEEEcCCCCEEEEEECCCCC
Confidence 78999999999999999999 67789999995 7999988 4444444544445667776642 223344333 344
Q ss_pred cc--------cc-------ccCC----------------cEEEEEEe----CCe---eEEEEeeCCCCC
Q psy9353 500 KA--------TK-------DLDG----------------KIVECKWE----NNQ---WVFMRERTDKSF 530 (543)
Q Consensus 500 ~e--------~~-------~~~g----------------~IvEc~~~----~g~---W~f~R~R~DK~~ 530 (543)
++ ++ ++.+ .|+|+.|. +|. .+|+|+|.||+-
T Consensus 236 d~~~~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~wv~P~~V~ev~~~~~t~~g~lRfP~f~r~R~DK~~ 304 (310)
T 1vs0_A 236 ERELANLKEMLAPLHTDESPFDVPLPARDAKGITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKP 304 (310)
T ss_dssp HHHHHHHHHHHGGGBCSSCSBSSCCCHHHHTTEEEBCTTCEEEEEESCBCTTSCBTTCEEEEECTTSCG
T ss_pred HHHHHHHHHHHHhhccCCCCccccCCcccCCCCEEEcCCEEEEEEEEEEcCCCeEEceEEEEEeCCCCH
Confidence 32 11 1210 29999998 344 779999999973
No 6
>2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A*
Probab=99.95 E-value=8.7e-28 Score=264.18 Aligned_cols=237 Identities=19% Similarity=0.274 Sum_probs=170.9
Q ss_pred CcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCC-CcCC--CCeEEEEEEEEeccCCc----------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDP-NKRL--TNTLLDGEMVIDRVQGQ---------- 348 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~-~~~~--~~tlLDGElV~d~~~~~---------- 348 (543)
+|+++||+||+|+++++. ++++++++|+++.+ +..||+..+. ...+ .+++||||||+...+|.
T Consensus 243 ~~~~E~K~DG~R~~i~~~-~g~v~l~SR~g~~~---t~~fPel~~~~~~~l~~~~~iLDGElv~~d~~g~~~~F~~L~~r 318 (561)
T 2cfm_A 243 EAEFEIKYDGARVQVHKD-GSKIIVYSRRLENV---TRAIPEIVEALKEAIIPEKAIVEGELVAIGENGRPLPFQYVLRR 318 (561)
T ss_dssp CEEEEEECCSEEEEEEEE-TTEEEEECTTCCBC---GGGCHHHHHHHHHHBCSSEEEEEEEEEEBCTTSSBCCTHHHHHH
T ss_pred cEEEEEeEceEEEEEEEE-CCEEEEEeCCCCCc---hhhhhhHHHHHHHhCCCcceEeeeEEEEEcCCCcccCHHHHHHH
Confidence 899999999999999997 47899999999977 4578875331 1122 58999999999532221
Q ss_pred -------------cccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccch---
Q psy9353 349 -------------NIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSV--- 412 (543)
Q Consensus 349 -------------~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~--- 412 (543)
.+++|++||||++||+++++.||.+|+++|++.+... .+ +...+++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~vFDlL~l~g~~l~~~pl~eRr~~L~~~~~~~--------------~~--i~~~~~~~~~~~ 382 (561)
T 2cfm_A 319 FRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQN--------------EK--IKVAENLITKKV 382 (561)
T ss_dssp HHCCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC--------------SS--EEECCEEEESCH
T ss_pred hhcccchhhhcccCceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhCcC--------------Cc--EEEeeeEEcCCH
Confidence 2468999999999999999999999999999866321 11 223333333
Q ss_pred hhHhhhhccccccccCCceEEEeeCCCCcccC-CCcceEEecCCcceeEEEEEEEEeecCCCccccceeeEeeccC----
Q psy9353 413 DKAGYLLSDKFTLCHEPDGLIFQPVDEPYVMG-KAVDTLKWKPHTMNSIDFLMKIETRSGLGILPTKVGKLYAGSN---- 487 (543)
Q Consensus 413 ~~~~~ll~~~~~~~h~~DGLIf~~~~spY~~G-~~~~~lKWKp~~~ntvDF~l~~~~~~~~g~~~~~~~~L~v~~~---- 487 (543)
..++.+|+. .+.++.||||+|+.++||.+| |+.+|+||||.. +|+||+|.-. ..+.|..++.+|.|++|-.
T Consensus 383 ~~~~~~~~~--~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~~-dt~D~vViG~-~~g~Gkr~g~~g~lllg~~d~~~ 458 (561)
T 2cfm_A 383 EEAEAFYKR--ALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM-ENLDLVIIGA-EWGEGRRAHLFGSFILGAYDPET 458 (561)
T ss_dssp HHHHHHHHH--HHHTTCCEEEEECTTCCCCTTCEEEEEEEECSSC-CCEEEEEEEE-EECSGGGTTSEEEEEEEEECTTT
T ss_pred HHHHHHHHH--HHHcCCceeEEeCCCCCCCCCCcCCCeEEEcccC-cceeEEEEEE-EeCCCCCCCccceEEEEEEeCCC
Confidence 334555551 378999999999999999999 566899999965 7999988443 3455655566777776532
Q ss_pred Cccccccee--EEcccc--------ccc------------CCcEEEEEEe----C-----C----eeEEEEeeCCCC--C
Q psy9353 488 RSQQQFAEM--KITKAT--------KDL------------DGKIVECKWE----N-----N----QWVFMRERTDKS--F 530 (543)
Q Consensus 488 ~~~~~f~~~--~~t~e~--------~~~------------~g~IvEc~~~----~-----g----~W~f~R~R~DK~--~ 530 (543)
+..++++.+ ++|++. +++ -..|+|+.|. . | .++|+|+|.||+ .
T Consensus 459 ~~~~~vgkvgsGftd~~~~~l~~~l~~~~~~~~~~~~wv~P~~V~EV~~~~~t~s~~~~~G~~lRfPrf~r~R~DK~~~e 538 (561)
T 2cfm_A 459 GEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRSGFALRFPRFVALRDDKGPED 538 (561)
T ss_dssp CCEEEEEEECSSCCHHHHHHHHHHHGGGEEEEETTEEEECSCCEEEEECSEEECCSSSTTSCEEESCEEEEECTTSCGGG
T ss_pred CeEEEEeEeCCCCCHHHHHHHHHHHhhhccccCCCeEEeCCceEEEEEEEEEEcCCccCCCCEEEccEEEEEeCCCChHH
Confidence 123344433 455431 111 1368999997 1 4 289999999999 8
Q ss_pred CChHHHHHHhhc
Q psy9353 531 PNAVETAMGEWN 542 (543)
Q Consensus 531 pN~~~t~~~v~~ 542 (543)
++++..+...++
T Consensus 539 a~t~~~l~~l~~ 550 (561)
T 2cfm_A 539 ADTIERIAQLYE 550 (561)
T ss_dssp SCBHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 899888877653
No 7
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=99.95 E-value=1.3e-27 Score=236.21 Aligned_cols=161 Identities=46% Similarity=0.839 Sum_probs=133.4
Q ss_pred cccccccCCeeeEEeecCC----------CCCC----CchhHhcccceEEecccccccCCChhhhhcCCcEEEEEEecCC
Q psy9353 30 NKSEVEENDIAYIKIQCEG----------HKEA----PNEKQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGH 95 (543)
Q Consensus 30 ~~~~i~~~G~~~~Ki~c~g----------r~~~----p~~es~~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dh 95 (543)
...+++...|.++|.|... |..+ +++++.+.+|++|||||++.++|+++.+++.||+|+++|+.||
T Consensus 37 ~~g~~I~~rfia~~~P~~~~~~~~v~~~~r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~y~~~p~~D~ 116 (241)
T 2c46_A 37 RRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGH 116 (241)
T ss_dssp SBCCCBTTTEEEECCCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCEEEECCCCCT
T ss_pred CCCCEeCCcEEEecCCcccchhhhccHhhcCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCEEEEEecCCC
Confidence 3456677778888876532 1221 2233456799999999999889999999999999999999998
Q ss_pred CCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHH
Q psy9353 96 KEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELF 175 (543)
Q Consensus 96 g~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~ 175 (543)
+.+|+.+.+.+|++.+.+++++++++.|+|||++|+||||++||||||+..+|++++|++.|+++|+++++++.|+++|+
T Consensus 117 ~~~P~~~~l~~~~~~i~~~~~~~~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~~R~~~i~~~~~l~~L~ 196 (241)
T 2c46_A 117 GECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELF 196 (241)
T ss_dssp TCCCCHHHHHHHHHHHTTC-----CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSTTCCCCHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
Confidence 88999999999999999999887789999999999999999999999998899999999999999999999999999999
Q ss_pred HHhCCCCC---CCCCCCC
Q psy9353 176 RRYDDVPC---NLPAPPS 190 (543)
Q Consensus 176 ~~y~~~~~---~~~~p~~ 190 (543)
++|.+... .|..|.|
T Consensus 197 ~~~~~~~~~~~~~~~p~W 214 (241)
T 2c46_A 197 RRYGDIEEAPPPPLLPDW 214 (241)
T ss_dssp HHHSCGGGCCCCCCCCTT
T ss_pred HHHhhcccCCCCCCccch
Confidence 99998542 3445666
No 8
>1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A*
Probab=99.94 E-value=3.7e-27 Score=239.90 Aligned_cols=219 Identities=17% Similarity=0.204 Sum_probs=148.7
Q ss_pred cCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCC-CCcCCCCeEEEEEEEEecc------------C
Q psy9353 280 EKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKD-PNKRLTNTLLDGEMVIDRV------------Q 346 (543)
Q Consensus 280 ~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~-~~~~~~~tlLDGElV~d~~------------~ 346 (543)
..+|+++||+||+|+++ +| +|++|+++.+. .|+..+ +...+ +++||||||+... +
T Consensus 18 ~~~~~~E~K~DG~R~~~----~g--~l~SR~g~~~t-----~p~l~~~~~~~~-~~iLDGElv~~~~~F~~l~~~~~~~~ 85 (297)
T 1fvi_A 18 QFPCLATPKIAGIRSVK----QT--QMLSRTFKPIR-----NSVMNRLLTELL-PEGSDGEISIEGATFQDTTSAVMTGH 85 (297)
T ss_dssp CSSEEEEECCCSEEEEE----SS--SEECTTSCBCS-----CHHHHHHHHHHS-CTTEEEEEECTTSCHHHHHHHHHSCC
T ss_pred CCcEEEEeeEeeeeEEe----cC--EEECCCCcccC-----cHHHHHHHHhcC-CeeEEEEEEECCCCHHHHHHHhccCC
Confidence 46899999999999986 34 99999998662 243222 12233 8999999998421 0
Q ss_pred --CccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEE-E--eccccchhhHhhhhcc
Q psy9353 347 --GQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSV-R--VKDFWSVDKAGYLLSD 421 (543)
Q Consensus 347 --~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i-~--~k~~~~~~~~~~ll~~ 421 (543)
.+.+++|++||||+++ +..||.+|+++|++.+..... .. ....+.+ . ...+.....+.++++.
T Consensus 86 ~~~~~~~~~~vFDll~l~----~~~pl~eRr~~L~~~~~~~~~-~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~ 153 (297)
T 1fvi_A 86 KMYNAKFSYYWFDYVTDD----PLKKYIDRVEDMKNYITVHPH-IL-------EHAQVKIIPLIPVEINNITELLQYERD 153 (297)
T ss_dssp ----CCEEEEEEEECSSC----TTSCHHHHHHHHHHHHHHCGG-GG-------GCSSEEEEECCCEEECSHHHHHHHHHH
T ss_pred CCCccceEEEEEeccCCC----CCCCHHHHHHHHHHHHhhcCC-cc-------ccceEEEcCcceEecCCHHHHHHHHHH
Confidence 1346799999999887 789999999999986642110 00 0012221 1 1122233455566652
Q ss_pred ccccccCCceEEEeeCCCCcccCCCc----ceEEecCCcceeEEEEEEEEeecC---------------------CCcc-
Q psy9353 422 KFTLCHEPDGLIFQPVDEPYVMGKAV----DTLKWKPHTMNSIDFLMKIETRSG---------------------LGIL- 475 (543)
Q Consensus 422 ~~~~~h~~DGLIf~~~~spY~~G~~~----~~lKWKp~~~ntvDF~l~~~~~~~---------------------~g~~- 475 (543)
.+.++.||||+|+.++||.+||+. +|+||||. .++|++|.-.. .+ .|..
T Consensus 154 --~~~~g~EGlv~K~~ds~Y~~GRs~~~~g~wlK~K~~--~~~d~vVig~~-~g~~~~~~~~~~~~g~~~r~~~~~G~~~ 228 (297)
T 1fvi_A 154 --VLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQF--KDAEATIISMT-ALFKNTNTKTKDNFGYSKRSTHKSGKVE 228 (297)
T ss_dssp --HHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEECCC--EEEEEEEEEEE-ESCC-------------------CCCTT
T ss_pred --HHHCCCcEEEEECCCCCcCCCCCCCCCCCeEEECCC--CCEEEEEEEEE-eCccccccccccccccccccccCCCccc
Confidence 378999999999999999999888 89999995 59999885443 34 5655
Q ss_pred ccceeeEeeccCCcccccc-eeEEccc--------ccccCCcEEEEEEe----CC---eeEEEEeeCCCC
Q psy9353 476 PTKVGKLYAGSNRSQQQFA-EMKITKA--------TKDLDGKIVECKWE----NN---QWVFMRERTDKS 529 (543)
Q Consensus 476 ~~~~~~L~v~~~~~~~~f~-~~~~t~e--------~~~~~g~IvEc~~~----~g---~W~f~R~R~DK~ 529 (543)
...+|.|+++.. + ..|. +.++|++ ..++.|+||||.|. +| .|+|+|+|+||.
T Consensus 229 ~g~~g~ll~~~~-g-~~~~vgtGftd~~~~~l~~~~~p~~g~v~ev~~~~~t~~g~lRfP~f~r~R~Dk~ 296 (297)
T 1fvi_A 229 EDVMGSIEVDYD-G-VVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMGSKDCPRFPVFIGIRHEED 296 (297)
T ss_dssp CCCEEEEEECST-T-CCEEECSSCCHHHHHHHHHTHHHHTTCEEEEEEECC-----CEEEEEEEEC----
T ss_pred CCcEEEEEEccC-C-eEEEECCCCCHHHHHHHHhhcCcccCcEEEEEEEEeCCCCCccCCeEEEEEcCCC
Confidence 567889988764 2 2332 2356654 35688999999998 34 399999999995
No 9
>1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1
Probab=99.94 E-value=1e-26 Score=260.18 Aligned_cols=243 Identities=18% Similarity=0.272 Sum_probs=170.2
Q ss_pred cccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCC-C----cCCCCeEEEEEEEEe-ccCC----
Q psy9353 278 LAEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDP-N----KRLTNTLLDGEMVID-RVQG---- 347 (543)
Q Consensus 278 l~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~-~----~~~~~tlLDGElV~d-~~~~---- 347 (543)
+...+|+++||+||+|++++++.+|+++|++|+++.+ +..||+..+. . .+..++|||||||+. ..+|
T Consensus 327 ~~~~~~~~E~K~DG~R~qih~~~~g~v~l~SR~g~d~---t~~fPel~~~l~~~~~~~~~~~ILDGElV~~d~~~g~~~~ 403 (688)
T 1x9n_A 327 FEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDN---TGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQP 403 (688)
T ss_dssp TTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSCBC---TTTCHHHHHTSGGGBCTTCCCEEEEEEEEEECTTTCSBCC
T ss_pred cCCCeEEEEEccccEeEEEEEcCCCeEEEEeCCCCcc---cccchHHHHHHHHhhccCCCCeEEeEEEEEEeCCCCCcCC
Confidence 3456899999999999999996556899999999977 4578865332 1 124689999999993 2222
Q ss_pred -----------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEecccc
Q psy9353 348 -----------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFW 410 (543)
Q Consensus 348 -----------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~ 410 (543)
+.+++|++||||++||+++++.||.+|+++|++.+.... .. +...+++
T Consensus 404 F~~L~~r~r~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~Pl~eRr~~L~~~~~~~~-------------~~--i~~~~~~ 468 (688)
T 1x9n_A 404 FQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETE-------------GE--FVFATSL 468 (688)
T ss_dssp HHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBT-------------TT--EEECCEE
T ss_pred HHHHHHHhhcccchhhcccceEEEEEechhhcCCccccCCHHHHHHHHHHhhccCC-------------Cc--EEEEeeE
Confidence 125799999999999999999999999999998664210 01 2222222
Q ss_pred ---chhhHhhhhccccccccCCceEEEeeC--CCCcccC-CCcceEEecCCcc----eeEEEEEEEEeecCCCcccccee
Q psy9353 411 ---SVDKAGYLLSDKFTLCHEPDGLIFQPV--DEPYVMG-KAVDTLKWKPHTM----NSIDFLMKIETRSGLGILPTKVG 480 (543)
Q Consensus 411 ---~~~~~~~ll~~~~~~~h~~DGLIf~~~--~spY~~G-~~~~~lKWKp~~~----ntvDF~l~~~~~~~~g~~~~~~~ 480 (543)
....++.+|+. .+.++.||||+|+. ++||.+| |+.+|+||||..+ +|+||+|.-.. .+.|..++.+|
T Consensus 469 ~~~~~~~~~~~~~~--a~~~g~EGlV~K~~~~ds~Y~~GkRs~~WlK~K~~y~~~~~dt~D~vVIG~~-~g~Gkr~g~~g 545 (688)
T 1x9n_A 469 DTKDIEQIAEFLEQ--SVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAY-LGRGKRAGRYG 545 (688)
T ss_dssp CCCCHHHHHHHHHH--HHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHHHHHSSCEEEEEEEEEEE-EBCTTSBTSEE
T ss_pred ecCCHHHHHHHHHH--HHhcCCceeEEeecccCCCCCCCCcCchHheeehhhhccccccccEEEEEEE-eCCCCCCCcee
Confidence 22345556551 37899999999999 8999998 5668999999653 79999885544 34555555667
Q ss_pred eEeeccC----Cccccccee--EEcccc--------cc-----------c-----------CCcEEEEEEe--C------
Q psy9353 481 KLYAGSN----RSQQQFAEM--KITKAT--------KD-----------L-----------DGKIVECKWE--N------ 516 (543)
Q Consensus 481 ~L~v~~~----~~~~~f~~~--~~t~e~--------~~-----------~-----------~g~IvEc~~~--~------ 516 (543)
.|++|-. +..++++.+ +||++. ++ + -..|+|+.|. +
T Consensus 546 slllg~~d~~~~~l~~vgkvgtGftd~~~~~l~~~l~~~~~~~~~~~~~~~~~~~p~vwv~P~~V~EV~~~e~t~S~~~~ 625 (688)
T 1x9n_A 546 GFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYP 625 (688)
T ss_dssp EEEEEEEETTTTEEEEEEEECCSCCHHHHHHHHHHHHHTEESSCCTTEECSSSCCCSEEECSCCEEEEEESEEEEESSCC
T ss_pred eEEEEEEeCCCCeEEEEeeeCCCCCHHHHHHHHHHhhccccCCCCCccccCCCCCCcEEeCCcEEEEEEEEeeecccccc
Confidence 7776522 112334432 244321 00 0 1378999884 1
Q ss_pred ----------Ce----eEEEEeeCCCC--CCChHHHHHHhh
Q psy9353 517 ----------NQ----WVFMRERTDKS--FPNAVETAMGEW 541 (543)
Q Consensus 517 ----------g~----W~f~R~R~DK~--~pN~~~t~~~v~ 541 (543)
|. .+|+|+|.||+ ..+++..+...+
T Consensus 626 ~~~g~~~~~~G~sLRfPrf~riR~DK~~~ea~t~~~l~~l~ 666 (688)
T 1x9n_A 626 AARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLY 666 (688)
T ss_dssp TTTTTSCSSCEEEEESCEEEEECTTCCGGGSCBHHHHHHHH
T ss_pred ccccccccCCCceEECcEEEEEeCCCChHHCCCHHHHHHHH
Confidence 32 78999999999 788888777654
No 10
>2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A*
Probab=99.94 E-value=2.1e-26 Score=255.65 Aligned_cols=238 Identities=18% Similarity=0.276 Sum_probs=169.2
Q ss_pred CcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCC-CcCC--CCeEEEEEEEEec-cCCc---------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDP-NKRL--TNTLLDGEMVIDR-VQGQ--------- 348 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~-~~~~--~~tlLDGElV~d~-~~~~--------- 348 (543)
+|+++||+||+|++++++ .++++|++|+++.+ +..||+..+. ...+ .+++||||||+.. .+|.
T Consensus 274 ~~~~E~K~DG~R~qi~~~-g~~v~l~SR~g~~~---t~~fP~l~~~~~~~l~~~~~iLDGElv~~d~~~g~~l~F~~L~~ 349 (621)
T 2hiv_A 274 NAIVDYKYDGERAQIHKK-EDKIFIFSRRLENI---TSQYPDVVDYVSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMH 349 (621)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEECTTCCBC---GGGCHHHHHHHHHHBCCSSEEEEEEEEEBCTTTCCBCCTHHHHH
T ss_pred cEEEEEEEcceeEEEEEc-CCEEEEEcCCCcCc---HhhhhhHHHHHHHhCCCcCeEEeEEEEEeecCCCCcCCHHHHhh
Confidence 899999999999999996 47999999999977 4578865331 1122 5899999999953 2221
Q ss_pred -------------cccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccch---
Q psy9353 349 -------------NIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSV--- 412 (543)
Q Consensus 349 -------------~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~--- 412 (543)
.+++|++||||++||+++++.||.+|+++|++.+... .+ +...+++..
T Consensus 350 r~~~~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~pl~eRr~~L~~~~~~~--------------~~--i~~~~~~~~~~~ 413 (621)
T 2hiv_A 350 RKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPN--------------DY--VKIAHHIQANNV 413 (621)
T ss_dssp HHHCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC--------------SS--EEECCEEEESSH
T ss_pred hccccchhhhcccCceEEEEEeccccCCCccccCCHHHHHHHHHHHhCcC--------------Cc--EEEeeeEEeCCH
Confidence 2568999999999999999999999999999866421 11 222333332
Q ss_pred hhHhhhhccccccccCCceEEEeeC--CCCcccC-CCcceEEecCCcce----eEEEEEEEEeecCCCccccceeeEeec
Q psy9353 413 DKAGYLLSDKFTLCHEPDGLIFQPV--DEPYVMG-KAVDTLKWKPHTMN----SIDFLMKIETRSGLGILPTKVGKLYAG 485 (543)
Q Consensus 413 ~~~~~ll~~~~~~~h~~DGLIf~~~--~spY~~G-~~~~~lKWKp~~~n----tvDF~l~~~~~~~~g~~~~~~~~L~v~ 485 (543)
..++.+|+. .+.++.||||+|+. ++||.+| |+..|+||||..++ |+||+|.-.. .+.|...+.+|.|++|
T Consensus 414 ~~~~~~~~~--~~~~g~EGlv~K~~~~ds~Y~~G~Rs~~WlK~K~~~~~~~~dt~D~vViG~~-~g~Gkr~g~~g~lllg 490 (621)
T 2hiv_A 414 EDLKSFFYR--AISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGF-YGKGKRGGKISSLLMA 490 (621)
T ss_dssp HHHHHHHHH--HHHTTCCEEEEECCSTTCCCCTTCEEEEEEEEETTCTTSSCEEEEEEEEEEE-ECSGGGTTSEEEEEEE
T ss_pred HHHHHHHHH--HHhcCCceEEEEecCCCCCccCCCcCCCeEEEechhccCcCceeEEEEEEEE-cCCCCCCCcccceEEE
Confidence 345556551 37899999999999 9999999 56789999998755 9999984433 3555555556777755
Q ss_pred cC----Cccccccee--EEcccc---------------cccC-------------CcEEEEEEe---C------------
Q psy9353 486 SN----RSQQQFAEM--KITKAT---------------KDLD-------------GKIVECKWE---N------------ 516 (543)
Q Consensus 486 ~~----~~~~~f~~~--~~t~e~---------------~~~~-------------g~IvEc~~~---~------------ 516 (543)
-. +..++++.+ ++|++. .++. ..|+|+.|. .
T Consensus 491 ~~d~~~~~l~~vgkvgtGftd~~~~~l~~~l~~~~~~~~p~~~~~~~~~~vwv~P~~V~EV~~~~~t~s~~~~a~~~~~~ 570 (621)
T 2hiv_A 491 AYNPKTDSFESVCKVASGFSDEQLDELQKKLMEIKRDVKHPRVNSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVE 570 (621)
T ss_dssp EEETTTTEEEEEEEECBSCCHHHHHHHHHHHHTTEESSCCTTEECSSCCSEEECSCCEEEEEESEEEEETTCCTTTTTSS
T ss_pred EEeCCCCeEEEEeeeCCCCCHHHHHHHHHHHhhhccCCCCCCcccCCCceEEecCceEEEEEEEEEEcCccccccccccc
Confidence 22 122344432 344421 0111 269999997 1
Q ss_pred ---Ce----eEEEEeeCCCC--CCChHHHHHHhhc
Q psy9353 517 ---NQ----WVFMRERTDKS--FPNAVETAMGEWN 542 (543)
Q Consensus 517 ---g~----W~f~R~R~DK~--~pN~~~t~~~v~~ 542 (543)
|. .+|.|+|.||+ ..+....+...++
T Consensus 571 ~~~G~sLRfPrf~r~R~DK~~~ea~t~~~l~~l~~ 605 (621)
T 2hiv_A 571 KDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYN 605 (621)
T ss_dssp TTCEEEEESCEEEEECTTCCGGGSCBHHHHHHHHH
T ss_pred CCCCceEEcCEEEEEeCCCChHHCCCHHHHHHHHH
Confidence 32 78999999999 7888888776653
No 11
>3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus}
Probab=99.93 E-value=8.7e-26 Score=247.41 Aligned_cols=237 Identities=18% Similarity=0.290 Sum_probs=168.3
Q ss_pred CCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCC-CcCC-CCeEEEEEEEEeccCC-----------
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDP-NKRL-TNTLLDGEMVIDRVQG----------- 347 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~-~~~~-~~tlLDGElV~d~~~~----------- 347 (543)
.+|+++||+||+|+++++++ +++.+++|+++.+ +..||+..+. ...+ .+++||||||+...+.
T Consensus 245 ~~~~~E~K~DG~R~qi~~~g-~~v~l~SR~g~d~---t~~fPel~~~~~~~l~~~~iLDGElv~~~~g~~~~F~~L~~r~ 320 (558)
T 3gde_A 245 RTAAVEWKFDGSRVQVHWDG-SRVTIYSRRLENV---TNALPDIVEEIKKSVKPGVILDGEVIAVKEGKPMPFQHVLRRF 320 (558)
T ss_dssp SSEEEEEECSSEEEEEEECS-SCCEEEETTCCBC---GGGCHHHHHHHHHHBCSSEEEEEEEEEEETTEEECHHHHHHHH
T ss_pred cceEEEEeEeeEEEEEEEeC-CEEEEEcCCCCcc---cccchHHHHHHHhhCCCCeEEEeEEEEcCCCcCCCHHHHHHHh
Confidence 58999999999999999964 6899999999977 4578876431 1212 3599999999852110
Q ss_pred -----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEecccc---chh
Q psy9353 348 -----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFW---SVD 413 (543)
Q Consensus 348 -----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~---~~~ 413 (543)
..+++|++||+|++|| ++++.||.+|+++|++.+..+ .. |...+.+ ...
T Consensus 321 ~~~~~~~~~~~~~pv~~~vFDlL~l~G-~l~~~pl~eRr~~L~~~~~~~--------------~~--i~~~~~~~~~~~~ 383 (558)
T 3gde_A 321 RRKHDVAKMVEKIPLEAHFFDILYHDG-ECIDLPLRERRKLLESAVNES--------------EK--IKLAKQIVTDSVD 383 (558)
T ss_dssp HC--CTHHHHHHSCEEEEEEEEEEESS-BCTTSBHHHHHHHHHHHBCCC--------------SS--EEECCEEEESCHH
T ss_pred ccccchhhHhhcCCeEEEEEEEEeeCC-CccCCCHHHHHHHHHHhcCCC--------------Ce--EEEeeeEecCCHH
Confidence 1236899999999999 999999999999999866321 11 2222222 223
Q ss_pred hHhhhhccccccccCCceEEEeeCCCCcccC-CCcceEEecCCcceeEEEEEEEEeecCCCccccceeeEeeccC----C
Q psy9353 414 KAGYLLSDKFTLCHEPDGLIFQPVDEPYVMG-KAVDTLKWKPHTMNSIDFLMKIETRSGLGILPTKVGKLYAGSN----R 488 (543)
Q Consensus 414 ~~~~ll~~~~~~~h~~DGLIf~~~~spY~~G-~~~~~lKWKp~~~ntvDF~l~~~~~~~~g~~~~~~~~L~v~~~----~ 488 (543)
.++.+|+. .+.++.||||+|+.++||.+| |+.+|+||||. ..|+||+|.-.. .+.|.....+|.|.+|-. +
T Consensus 384 ~~~~~~~~--~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~-~~t~D~vViG~~-~g~Gkr~g~~g~lllg~~d~~~g 459 (558)
T 3gde_A 384 EVRKMYDE--AISAGHEGVMIKLPSSPYIPGKRGKNWLKVKAI-METLDLVVVGGE-WGEGKRSHWLSSFELACLDPVTG 459 (558)
T ss_dssp HHHHHHHH--HHHTTCCEEEEECTTCBCCTTCEEEEEEEEESS-CCCEEEEEEEEE-ECCTTGGGSEEEEEEEEECTTTC
T ss_pred HHHHHHHH--HHHcCCceeEEecCCCCCCCCCcCCceEEEecc-cceEEEEEEEEE-eCCCCccCccceEEEEEeeCCCC
Confidence 44556651 378999999999999999999 56789999985 689999885443 355655566777776642 1
Q ss_pred ccccccee--EEccc--------cccc------------CCcEEEEEEe----C-----C----eeEEEEeeCCCC--CC
Q psy9353 489 SQQQFAEM--KITKA--------TKDL------------DGKIVECKWE----N-----N----QWVFMRERTDKS--FP 531 (543)
Q Consensus 489 ~~~~f~~~--~~t~e--------~~~~------------~g~IvEc~~~----~-----g----~W~f~R~R~DK~--~p 531 (543)
..++++.+ ++|++ ++++ -..|+|+.|. . | ..+|.|+|.||+ ..
T Consensus 460 ~l~~vgkvgsGftd~~~~~l~~~l~~~~~~~~~~~vwv~P~lV~EV~~~~~t~s~~~~~g~~LRfPrf~r~R~DK~~~ea 539 (558)
T 3gde_A 460 KLLKVGRVATGFTEEDLEELTEMFRPLIVSQQGKKVEFIPKYVFEVAYQEIQKSPKYESGYALRFPRFVRLRDDKDVDEA 539 (558)
T ss_dssp CEEEEEEECSSCCHHHHHHHHHHHGGGEEEEETTEEEECSCCEEEEECSEEEECSSSTTSEEEESCEEEEECTTCCGGGS
T ss_pred EEEEEeeeCCCCCHHHHHHHHHHHHhhcccCCCCcEEecCcEEEEEEEeeeecCCccCCCCEEECcEEEEEECCCChHHC
Confidence 23344432 35442 1111 1478999987 1 2 188999999995 88
Q ss_pred ChHHHHHHhhc
Q psy9353 532 NAVETAMGEWN 542 (543)
Q Consensus 532 N~~~t~~~v~~ 542 (543)
+++.++...++
T Consensus 540 ~t~~~l~~l~~ 550 (558)
T 3gde_A 540 DTIERVENLYK 550 (558)
T ss_dssp CBHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 89988887764
No 12
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.92 E-value=6.1e-25 Score=205.28 Aligned_cols=151 Identities=31% Similarity=0.505 Sum_probs=127.5
Q ss_pred ccccccccccccC-CeeeEEeecCCCC-----C---CCchhHh---cccceEEecccccccCCChhhhhcCCcEEEEEEe
Q psy9353 25 TSRFYNKSEVEEN-DIAYIKIQCEGHK-----E---APNEKQT---RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQC 92 (543)
Q Consensus 25 t~ryY~~~~i~~~-G~~~~Ki~c~gr~-----~---~p~~es~---~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~ 92 (543)
|..|=...++++. .|.+++.|..+.. . .-+++.+ +.+|++||||+++.++|+++.++..|++|+++|+
T Consensus 7 w~~~~~~g~~i~~~~~i~~~~P~~~~~~~~~~~~~~~~~~~~ll~~~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~ 86 (169)
T 1yn9_A 7 WHNYLQCGQVIKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQV 86 (169)
T ss_dssp GGGSCSBCCCCTTSSEEEECCCCCGGGGTTBCCGGGCCCHHHHHHHCTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCC
T ss_pred hhhCCCCCCCcCCCeeEEecCcchHhHhhcCCCcccCCCHHHHHhhCCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeC
Confidence 4444445566665 6888888754221 1 1122322 6899999999998889999999989999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHH
Q psy9353 93 EGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLN 172 (543)
Q Consensus 93 ~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~ 172 (543)
.|+ .+|+.+.+..|++.+.+|+++++++.|+|||++|+||||+++|+|||...+|++++|++.|+++|+.++++++|++
T Consensus 87 ~d~-~~p~~~~~~~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~~~~a~~~~r~~R~~~~~~~~f~~ 165 (169)
T 1yn9_A 87 PGQ-TLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKARGHKIERQNYVQ 165 (169)
T ss_dssp CSS-SCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSCCCCHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHH
Confidence 997 5888899999999999999887889999999999999999999999997899999999999999999999999999
Q ss_pred HHHH
Q psy9353 173 ELFR 176 (543)
Q Consensus 173 ~L~~ 176 (543)
+|++
T Consensus 166 qL~~ 169 (169)
T 1yn9_A 166 DLLI 169 (169)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9973
No 13
>3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens}
Probab=99.92 E-value=3.2e-24 Score=235.77 Aligned_cols=238 Identities=16% Similarity=0.205 Sum_probs=162.7
Q ss_pred CCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCC-CCC-------cCCCCeEEEEEEEE-eccCC----
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRK-DPN-------KRLTNTLLDGEMVI-DRVQG---- 347 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~-~~~-------~~~~~tlLDGElV~-d~~~~---- 347 (543)
.+|+++||+||+|+++++++ +++.+++|+++.+ ||+.. .+. ....+++||||||+ |..+|
T Consensus 247 ~~~~~E~K~DG~R~qih~~g-~~v~l~SR~g~~~------~p~~~~~l~~~l~~~~~~~~~~iLDGElv~~d~~~g~~~~ 319 (579)
T 3l2p_A 247 NGMFSEIKYDGERVQVHKNG-DHFSYFSRSLKPV------LPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLP 319 (579)
T ss_dssp TCEEEEECCCSEEEEEEEET-TEEEEECTTSCBC------CGGGTTTGGGTHHHHSTTCSEEEEEEEEEEBCTTTCCBCC
T ss_pred CCeEEEEccCcEEEEEEEEC-CEEEEECCCCCcc------ChhHHHHHHHHHHHhcCcCCceEEEeEEEEEeCCCCcccC
Confidence 57999999999999999975 6999999999854 34321 111 11356999999999 42222
Q ss_pred -------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEe-ccccchh
Q psy9353 348 -------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRV-KDFWSVD 413 (543)
Q Consensus 348 -------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~-k~~~~~~ 413 (543)
..++.|++||+|++||++++++||.+|+++|++.+.. . ..++.+.. ..+....
T Consensus 320 F~~L~~~~~~~~~~~~v~~~vFDlL~l~G~~L~~~Pl~eRr~~L~~~~~~-~------------~~~i~~~~~~~~~~~~ 386 (579)
T 3l2p_A 320 FGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVE-I------------PNRIMFSEMKRVTKAL 386 (579)
T ss_dssp GGGGSHHHHHHCSSCCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHCCC-B------------TTTEEECCEEEECSHH
T ss_pred HHHHHHHhhhhcccCCeEEEEEEeeccCCCccccCCHHHHHHHHHHHhhc-C------------CCeEEEeeeEEcCCHH
Confidence 1257899999999999999999999999999986632 1 01222211 1112233
Q ss_pred hHhhhhccccccccCCceEEEeeCCCCcccCCCcceEEecCCcc------eeEEEEEEEEeecCCCccccceeeEeeccC
Q psy9353 414 KAGYLLSDKFTLCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTM------NSIDFLMKIETRSGLGILPTKVGKLYAGSN 487 (543)
Q Consensus 414 ~~~~ll~~~~~~~h~~DGLIf~~~~spY~~G~~~~~lKWKp~~~------ntvDF~l~~~~~~~~g~~~~~~~~L~v~~~ 487 (543)
.+.++|+. .+.++.||||+|+.++||.+|++ +|+|||+..+ .|+|++|.-.. .+.|...+.+|.|.+|-.
T Consensus 387 ~~~~~~~~--a~~~g~EGlv~K~~ds~Y~~Grr-~WlK~K~~y~~~g~~~~t~D~vViG~~-~G~Gkr~g~~g~lllg~~ 462 (579)
T 3l2p_A 387 DLADMITR--VIQEGLEGLVLKDVKGTYEPGKR-HWLKVKKDYLNEGAMADTADLVVLGAF-YGQGSKGGMMSIFLMGCY 462 (579)
T ss_dssp HHHHHHHH--HHHTTCCCEEEEESSCCCCTTCE-EEEEECTTTCC---CCEEEEEEEEEEE-CCCTTSCSSCCEEEEEEE
T ss_pred HHHHHHHH--HHHhCCCceEEecCcCCCCCCCe-eeEEEechhhccccccccccEEEEEEE-eCCCCCCCceeEEEEEEE
Confidence 45556652 37899999999999999999998 8999999754 69999885554 345544455566665532
Q ss_pred ----Cccccccee--EEccc--------c-----------------------------cccCCcEEEEEEe---------
Q psy9353 488 ----RSQQQFAEM--KITKA--------T-----------------------------KDLDGKIVECKWE--------- 515 (543)
Q Consensus 488 ----~~~~~f~~~--~~t~e--------~-----------------------------~~~~g~IvEc~~~--------- 515 (543)
+..++++.+ +||++ + .|....|+|+.+.
T Consensus 463 d~~~~~l~~vgkvgtGftd~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~pd~~~~~P~~~~V~Ei~~~~i~~S~~~~ 542 (579)
T 3l2p_A 463 DPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHT 542 (579)
T ss_dssp CTTTSSEEEEEEECTTCCHHHHHHTTTSSCCCCCCC--------------------------CEEEEEEESCEEECTTSS
T ss_pred eCCCCeEEEecCccCCCCHHHHHHHHHHhhccccccCCccCCceeecCCCCCCcEEEecCCCCeEEEEEeeEEeecCCcc
Confidence 112233322 23221 0 1123579999987
Q ss_pred -CCe----eEEEEeeCCCC--CCChHHHHHHhhc
Q psy9353 516 -NNQ----WVFMRERTDKS--FPNAVETAMGEWN 542 (543)
Q Consensus 516 -~g~----W~f~R~R~DK~--~pN~~~t~~~v~~ 542 (543)
.|. .+|.|+|+||+ .++++..+...++
T Consensus 543 ~~G~sLRFPR~~riR~DK~~~ea~t~~~l~~l~~ 576 (579)
T 3l2p_A 543 ADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQ 576 (579)
T ss_dssp STTEEESSCEECCCCSSCCSSSSCBHHHHHHHHH
T ss_pred cCCEEEECCeEEEEeCCCChHHCCCHHHHHHHHh
Confidence 132 89999999995 7999999887764
No 14
>1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1
Probab=99.91 E-value=6.6e-24 Score=220.83 Aligned_cols=168 Identities=18% Similarity=0.168 Sum_probs=121.0
Q ss_pred CCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCc-----cCCCCCC-CC----cCCCCeEEEEEEEEeccC----
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGL-----TFPHRKD-PN----KRLTNTLLDGEMVIDRVQ---- 346 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~-----~fP~~~~-~~----~~~~~tlLDGElV~d~~~---- 346 (543)
..|++++|+||+|++++++.+|+++|+||+++.+ +.+ .||.... +. ....+++||||||+...+
T Consensus 26 ~~~~~E~K~DG~R~~~~~~~~g~v~l~SR~g~~~--~~l~~~~~~~p~~~~~l~~~~~~~~~~~iLDGElv~~~~~F~~l 103 (348)
T 1a0i_A 26 GYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTI--PALEHLNGFDVRWKRLLNDDRCFYKDGFMLDGELMVKGVDFNTG 103 (348)
T ss_dssp SSEEEEECCCSEEEEEEEETTSEEEEECTTSCBC--GGGGGGCEECHHHHHHHHSTTCCCTTEEEEEEEEEESSSCTTTH
T ss_pred CcEEEEEeeceeEEEEEEeCCCeEEEEcCCCCCC--cchhhhhcccchHHHHHhhhhccCCCCEEEEEEEEEeCCCHHHH
Confidence 3677778999999999997557899999999854 222 3332211 11 122489999999984210
Q ss_pred -------------------------C----------ccccEEEEEEEEEEC----Cccc---cCCCHHHHHHHHHHhhhh
Q psy9353 347 -------------------------G----------QNIPRYLVYDIIRFD----NNDV---TRQKFTTRIQIIKVEIIE 384 (543)
Q Consensus 347 -------------------------~----------~~~~~ylifDil~~~----G~~v---~~~p~~eR~~~L~~~i~~ 384 (543)
. +.+++|++||||++| |+++ +.+||.+|+++|++.+.
T Consensus 104 ~~~~~~k~~~~k~v~~~~~~~r~~~~~~~~i~~~~~~~~~~~~vFDll~l~~~~~G~~l~~~~~~pl~eRr~~L~~l~~- 182 (348)
T 1a0i_A 104 SGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMTLLMQEHVKNMLPLLQE- 182 (348)
T ss_dssp HHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH-
T ss_pred HHHhcccccccccccccccccccccccccccccccccCcEEEEEEeeEeeCCCCCCccchhhccCCHHHHHHHHHHHhh-
Confidence 0 224689999999999 9998 89999999999998552
Q ss_pred hhHHHhhhhccccCCCCeEEEeccccc---hhhHhhhhccccccccCCceEEEeeCCCCcccCCCcceEEecCCcceeEE
Q psy9353 385 PRHRAMENSRINKLAEPFSVRVKDFWS---VDKAGYLLSDKFTLCHEPDGLIFQPVDEPYVMGKAVDTLKWKPHTMNSID 461 (543)
Q Consensus 385 p~~~~~~~~~~~~~~~pf~i~~k~~~~---~~~~~~ll~~~~~~~h~~DGLIf~~~~spY~~G~~~~~lKWKp~~~ntvD 461 (543)
+. . . -.++..+.+. ...++++|+. .+.++.||||+|+.++||.+|++..|+||||.. |+|
T Consensus 183 ~~----~--------~-~~i~~~~~~~~~~~~~~~~~~~~--~~~~g~EGlv~K~~ds~Y~~Grr~~wlK~K~~~--~~D 245 (348)
T 1a0i_A 183 YF----P--------E-IEWQAAESYEVYDMVELQQLYEQ--KRAEGHEGLIVKDPMCIYKRGKKSGWWKMKPEN--EAD 245 (348)
T ss_dssp HC----T--------T-SEEEECCEEEESSHHHHHHHHHH--HHTTTCCCEEEECTTCEECSEEEEEEEEESCCE--EEE
T ss_pred hC----C--------C-CeEEEeccEecCCHHHHHHHHHH--HHHcCCceEEEeCCCCCCCCCCccCcEEEeecc--cEE
Confidence 10 0 0 1234444443 2445556651 378999999999999999999887899999965 999
Q ss_pred EEEEEEe
Q psy9353 462 FLMKIET 468 (543)
Q Consensus 462 F~l~~~~ 468 (543)
|+|.-..
T Consensus 246 ~vViG~~ 252 (348)
T 1a0i_A 246 GIIQGLV 252 (348)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9885544
No 15
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=99.87 E-value=2.2e-22 Score=207.53 Aligned_cols=152 Identities=20% Similarity=0.209 Sum_probs=131.9
Q ss_pred cceeeeeeecccccccccccccccCCeeeEEeecCCCCCCC----chhHhcccceEEecccccccCCChhhhhcCCcEEE
Q psy9353 13 SVEFESKSNLTKTSRFYNKSEVEENDIAYIKIQCEGHKEAP----NEKQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYI 88 (543)
Q Consensus 13 ~~~~~~~idlt~t~ryY~~~~i~~~G~~~~Ki~c~gr~~~p----~~es~~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~ 88 (543)
..+-|+.+||| |++++|++|++|+..++..+|+... ++++.+.+.++|+|||++ +.|+++.+. .++.
T Consensus 18 ~~~~~~~LDlt-----yIT~riIam~~P~~~~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE-~~Yd~~~f~---~~v~ 88 (339)
T 3v0d_A 18 YRKDGFDLDLT-----YVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSE-RGYDETKFD---NHVY 88 (339)
T ss_dssp EEETTEEEEEE-----EEETTEEEECCEESSSCCTTSEEHHHHHHHHHHHSTTCEEEEEEETT-CCCCGGGGT---TCEE
T ss_pred eccCCCceeEE-----EEecCEEEEECCCCCchhhccCCHHHHHHHHHHhCCCceEEEECCCC-CCCChHHcC---CeEE
Confidence 34679999999 9999999999999998888888754 445667889999999976 789998885 3688
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCC-CHHHHHHHHHhcCC-----
Q psy9353 89 KIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNF-DVSAAIFAFSMARP----- 162 (543)
Q Consensus 89 ~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~-s~~~Al~~~~~~R~----- 162 (543)
++|++|| .+|+.+.+.+|++.+.+|++++++++|+|||++|.||||+++|||||+...+ ++++|++.|+++|+
T Consensus 89 ~~p~pD~-~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~~~R~~~~~~ 167 (339)
T 3v0d_A 89 RVMIDDH-NVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVG 167 (339)
T ss_dssp EEEECTT-SCCCHHHHHHHHHHHHHHHHTCTTCEEEEECSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHSSCCTT
T ss_pred EeccCCC-CCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCcccc
Confidence 8999998 5899999999999999999998889999999999999999999999998777 89999999999998
Q ss_pred ---CCCCCHHHHHHH
Q psy9353 163 ---PGIYKQDYLNEL 174 (543)
Q Consensus 163 ---~~i~~~~yi~~L 174 (543)
.++..+.+++.|
T Consensus 168 ~~~~~v~~psQ~Ryv 182 (339)
T 3v0d_A 168 DVFQGVETASQIRYV 182 (339)
T ss_dssp SCCCCC-CHHHHHHH
T ss_pred ccccccCCHHHHHHH
Confidence 467776544433
No 16
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=99.85 E-value=4.9e-21 Score=198.57 Aligned_cols=145 Identities=12% Similarity=0.087 Sum_probs=116.8
Q ss_pred eeecccccccccccccccCCeeeEEeecCCCCCCC----chhHhcccceEEecccccccCCChhhhhcCCcEEEEEEecC
Q psy9353 19 KSNLTKTSRFYNKSEVEENDIAYIKIQCEGHKEAP----NEKQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEG 94 (543)
Q Consensus 19 ~idlt~t~ryY~~~~i~~~G~~~~Ki~c~gr~~~p----~~es~~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~d 94 (543)
.+||| |++++|++|++|+..++..+|+... ++++.+.+.++|+||+. +.|+++.+.. +++++|++|
T Consensus 21 ~LDlt-----yIT~riIam~~P~~~~e~~yrn~i~~v~~~L~~~H~~~y~V~NLse--~~Yd~~~f~~---~V~~~~~pD 90 (361)
T 3n0a_A 21 DLDFT-----YVTSRIIVMSFPLDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSP--KSYRTAKFHS---RVSECSWPI 90 (361)
T ss_dssp SCEEE-----ESSSSEEEEEC------------CHHHHHHHHHHHTTCEEEEECSS--SCCGGGSCGG---GEEECCCCS
T ss_pred CccEE-----EEcCCEEEEECCCCCchhhhcCCHHHHHHHHHHhCCCeEEEEECCC--CCCChhhcCC---cEEEeecCC
Confidence 67898 9999999999999999999999874 44556778999999973 6899888764 578899999
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCC-CHHHHHHHHHhcCCCCCCCHHHHHH
Q psy9353 95 HKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNF-DVSAAIFAFSMARPPGIYKQDYLNE 173 (543)
Q Consensus 95 hg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~-s~~~Al~~~~~~R~~~i~~~~yi~~ 173 (543)
| .+|+.+.+..|++.+.+|++++++++|+|||++|.||||+++|||||+...+ ++++|++.|+++|++....+.+++.
T Consensus 91 ~-~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~~psQ~ry 169 (361)
T 3n0a_A 91 R-QAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRY 169 (361)
T ss_dssp S-SCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCCCHHHHHH
T ss_pred C-CCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 8 5889999999999999999998889999999999999999999999998666 9999999999999988777765554
Q ss_pred H
Q psy9353 174 L 174 (543)
Q Consensus 174 L 174 (543)
|
T Consensus 170 v 170 (361)
T 3n0a_A 170 L 170 (361)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.81 E-value=2.5e-19 Score=165.65 Aligned_cols=115 Identities=21% Similarity=0.277 Sum_probs=102.7
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhh------CCCCeEEEEcCCCCC
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISK------SPLEKIGVHCTHGFN 132 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~------~~~~~V~VHC~~G~~ 132 (543)
..+|+.|||||.+ .|+++.++..|++|+++|+.|+ .+|+.+.+..|++.+.++++. .++++|+|||++|+|
T Consensus 45 ~~gi~~Iv~l~~~--~~~~~~~~~~~i~~~~~p~~d~-~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~ 121 (167)
T 3s4o_A 45 HRGVRHLVRVCGP--TYDATLVKSRGIDVHSWPFDDG-APPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLG 121 (167)
T ss_dssp TTTEEEEEECSCC--CSCTHHHHTTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSS
T ss_pred HCCCCEEEECCCC--CCCHHHHHHCCCeEEEeccCCC-CCCCHHHHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCC
Confidence 5799999999975 6788888889999999999996 689988999999999988776 557899999999999
Q ss_pred hhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy9353 133 RTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRR 177 (543)
Q Consensus 133 RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~ 177 (543)
|||+++|+|||...++++++|++.+++.||..+. +.+...|+++
T Consensus 122 RTg~~~a~~L~~~~~~~~~~a~~~vr~~R~~~v~-~~Q~~fl~~~ 165 (167)
T 3s4o_A 122 RAPILVALALVEYGNVSALDAIALIREKRKGAIN-QTQMHWITKY 165 (167)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHSTTCSC-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCC-HHHHHHHHhh
Confidence 9999999999998899999999999999999997 7766666553
No 18
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.80 E-value=3.5e-19 Score=163.28 Aligned_cols=119 Identities=15% Similarity=0.175 Sum_probs=104.8
Q ss_pred cccceEEecccccccCC----ChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChh
Q psy9353 59 RLKIGLWIDLTKTSRFY----DKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRT 134 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y----~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RT 134 (543)
..+|++||||+.+.+.. ++..+...|++|+++|+.|+...|..+.+.++++.+.+.+++ +++|+|||++|+|||
T Consensus 26 ~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~~~~~--~~~vlVHC~~G~~Rs 103 (157)
T 3rgo_A 26 DENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQAL--GQCVYVHCKAGRSRS 103 (157)
T ss_dssp HSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHHHHHT--TCEEEEESSSSSSHH
T ss_pred HcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHHHHHC--CCEEEEECCCCCChH
Confidence 68999999999875432 355677789999999999975688888899999988887764 579999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 135 GFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 135 G~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
|+++++|||...+|++++|++.++++||..++++.++.+|..++.
T Consensus 104 g~~~~a~l~~~~~~~~~~a~~~v~~~R~~~~~~~~~~~~L~~~~~ 148 (157)
T 3rgo_A 104 ATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHK 148 (157)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence 999999999988999999999999999999999999999877664
No 19
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.80 E-value=4.5e-19 Score=168.58 Aligned_cols=142 Identities=15% Similarity=0.215 Sum_probs=119.5
Q ss_pred cccCCeeeEEeecCCCCCCC-chhHh-cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHH
Q psy9353 34 VEENDIAYIKIQCEGHKEAP-NEKQT-RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLC 111 (543)
Q Consensus 34 i~~~G~~~~Ki~c~gr~~~p-~~es~-~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v 111 (543)
+.-.+..++-..|++..... +.+.+ ..+|+.|||||.. .|+++.+...|++|+++|+.| +.+|+.+.+..|++.+
T Consensus 32 ~~~~~~r~I~tq~P~~~t~~~~~~~L~~~gi~~Iv~l~~~--~~~~~~~~~~~i~~~~~pi~d-~~~~~~~~~~~~~~~i 108 (189)
T 3rz2_A 32 VTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEA--TYDTTLVEKEGIHVLDWPFDD-GAPPSNQIVDDWLSLV 108 (189)
T ss_dssp EEETTEEEEEECCCCTTTHHHHHHHHHTTTEEEEEECSCC--CSCCHHHHHSSCEEEECCCCS-SSCCCSHHHHHHHHHH
T ss_pred eecCCCeEEEeCCCCcccHHHHHHHHHHcCCcEEEEeCCC--cCCHHHHHHcCcEEEEecCCC-CCCCCHHHHHHHHHHH
Confidence 44445667777777775542 33333 5799999999964 578888888999999999988 5799999999999999
Q ss_pred HHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhCC
Q psy9353 112 SKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYDD 180 (543)
Q Consensus 112 ~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~~ 180 (543)
.++++..++++|+|||++|+||||+++|+|||. .+|++++|++.+++.|+..+ ++.++..|+.+...
T Consensus 109 ~~~~~~~~~~~VlVHC~aG~gRSg~~va~~L~~-~g~~~~~a~~~vr~~R~~~v-~~~Q~~~l~~~~~~ 175 (189)
T 3rz2_A 109 KIKFREEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF-NSKQLLYLEKYRPK 175 (189)
T ss_dssp HHHHHHSTTCEEEEECSSSSTTHHHHHHHHHHT-TTCCHHHHHHHHHTTSSSCC-CHHHHHHHHHCCCC
T ss_pred HHHHHhCCCCcEEEECCCCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCCC-CHHHHHHHHHHHHH
Confidence 998877788999999999999999999999995 69999999999999999988 78888888877665
No 20
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=99.79 E-value=1.7e-19 Score=185.83 Aligned_cols=153 Identities=16% Similarity=0.229 Sum_probs=126.1
Q ss_pred ceeeeeeecccccccccccccccCCeeeEEeecCCCCCCC----chhHhcccceEEecccccccCCChhhhhcCCcEEEE
Q psy9353 14 VEFESKSNLTKTSRFYNKSEVEENDIAYIKIQCEGHKEAP----NEKQTRLKIGLWIDLTKTSRFYDKSEVEENDIAYIK 89 (543)
Q Consensus 14 ~~~~~~idlt~t~ryY~~~~i~~~G~~~~Ki~c~gr~~~p----~~es~~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ 89 (543)
.+-|+.+|++ |.++.++++++|...++..+|+.+. .+++.+.+.+.|+|||++ +.|+++.+ +++|++
T Consensus 11 ~~~~~~ldl~-----~It~~li~~~~P~~~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e-~~y~~~~~---~~~~~~ 81 (324)
T 1d5r_A 11 QEDGFDLDLT-----YIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAE-RHYDTAKF---NCRVAQ 81 (324)
T ss_dssp CBTTTTBSEE-----EEETTEEEECCCBSSCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESS-CCCCTTSC---SSCEEE
T ss_pred hcCCcccceE-----EEcCcEEEEeCCCCcchhhhccCHHHHHHHHHhcCCCcEEEEEcCCC-CCCChHHh---CCeEEE
Confidence 4567888888 9999999999998777666665542 334456789999999875 56777654 467999
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCC-CHHHHHHHHHhcC---CCCC
Q psy9353 90 IQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNF-DVSAAIFAFSMAR---PPGI 165 (543)
Q Consensus 90 ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~-s~~~Al~~~~~~R---~~~i 165 (543)
+|++|| .+|+.+.+.+|++.+.+|++++++++|+|||++|+||||+++|||||....+ ++++|++.|+.+| ++++
T Consensus 82 ~~~~D~-~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~~~~~~eal~~~~~~R~~r~~~v 160 (324)
T 1d5r_A 82 YPFEDH-NPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGV 160 (324)
T ss_dssp EEECTT-SCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSS
T ss_pred EeecCC-CCCcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCCCC
Confidence 999998 5888899999999999999887789999999999999999999999999775 9999999988777 4788
Q ss_pred CCHHHHHHHHH
Q psy9353 166 YKQDYLNELFR 176 (543)
Q Consensus 166 ~~~~yi~~L~~ 176 (543)
..+.+.+.|+.
T Consensus 161 ~~~~Q~~yl~~ 171 (324)
T 1d5r_A 161 TIPSQRRYVYY 171 (324)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 88766655543
No 21
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=157.28 Aligned_cols=116 Identities=17% Similarity=0.283 Sum_probs=93.0
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+.+. .+..|++|+++|+.|+...+-.+.+.++++.+.+.++ .++.|+|||++|+||||+++
T Consensus 27 ~~gi~~Vi~l~~e~p~~~---~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~--~~~~VlVHC~~G~~RSg~~~ 101 (149)
T 1zzw_A 27 RLNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQ--CGKGLLIHCQAGVSRSATIV 101 (149)
T ss_dssp HTTEEEEEECCSSSCCTT---GGGTCSEEEECCCCCSSSCCCHHHHHHHHHHHHHHHH--TTCEEEEECSSSSSHHHHHH
T ss_pred HCCCcEEEEecCCCCCcc---cCCCCeEEEEEECCCCCcccHHHHHHHHHHHHHHHHH--cCCeEEEECCCCCCHHHHHH
Confidence 479999999997643321 3357999999999996333323445555555555544 46899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||...||++++|++.++++||...+++.|+.+|..+..
T Consensus 102 ~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~ 142 (149)
T 1zzw_A 102 IAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 142 (149)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHH
Confidence 99999989999999999999999999999999999976654
No 22
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.77 E-value=7.6e-19 Score=159.30 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=92.5
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCC-hHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPN-EKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFL 137 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~-~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ 137 (543)
..+|++||||+.+.+.+ + ..|++|+++|+.|+. .|+ .+.+..+++.+++.+++ ++.|+|||.+|.||||++
T Consensus 27 ~~gI~~Vi~l~~~~~~~----~-~~~~~~~~ip~~D~~-~~~~~~~~~~~~~~i~~~~~~--~~~VlVHC~~G~~RS~~~ 98 (144)
T 3ezz_A 27 ALGITALLNVSSDCPNH----F-EGHYQYKCIPVEDNH-KADISSWFMEAIEYIDAVKDC--RGRVLVHSQAGISRSATI 98 (144)
T ss_dssp HTTCCEEEECSSSCCCT----T-TTTSEEEECCCCSSS-SCCTTTTHHHHHHHHHHHHHT--TCCEEEEESSSSSHHHHH
T ss_pred HCCCeEEEEccCCCCcc----C-CCCceEEEEEcccCC-CCChHHHHHHHHHHHHHHHhc--CCeEEEECCCCCChhHHH
Confidence 57999999999764322 2 258999999999964 443 45666777777665543 589999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy9353 138 LISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRR 177 (543)
Q Consensus 138 ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~ 177 (543)
+++|||...+|++++|++.++++||...+++.|+.+|..+
T Consensus 99 ~~aylm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~ 138 (144)
T 3ezz_A 99 CLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQF 138 (144)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHhHHHHHHHH
Confidence 9999999999999999999999999999999999999764
No 23
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.77 E-value=3e-18 Score=157.13 Aligned_cols=117 Identities=18% Similarity=0.253 Sum_probs=103.5
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|+.||+|+.. .|++..+...|++|+++|+.| +.+|+.+.+.+|++.+.+++.++++++|+|||++|+||||+++
T Consensus 38 ~~gi~~Iv~l~~~--~~~~~~~~~~~~~~~~~p~~d-~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVHC~aG~~Rtg~~~ 114 (159)
T 1rxd_A 38 KYGVTTIVRVCEA--TYDTTLVEKEGIHVLDWPFDD-GAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLV 114 (159)
T ss_dssp HTTEEEEEECSCC--CSCCHHHHHTTCEEEECCC---CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEECSSSSTTHHHHH
T ss_pred HcCCCEEEEcCCC--ccCHHHHHHcCCEEEeCCCcC-CCCCCHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 5799999999964 577777877899999999887 5788889999999999999887778999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhCC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYDD 180 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~~ 180 (543)
|+||+. .|+++++|++.+++.|+..+ ++.+...|+.++..
T Consensus 115 a~~l~~-~~~~~~~a~~~vr~~R~~~~-~~~q~~~l~~~~~~ 154 (159)
T 1rxd_A 115 ALALIE-GGMKYEDAVQFIRQKRRGAF-NSKQLLYLEKYRPK 154 (159)
T ss_dssp HHHHHH-TTCCHHHHHHHHHTTCTTCC-CHHHHHHHHHCCCC
T ss_pred HHHHHH-hCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHH
Confidence 999998 59999999999999999988 78999999887764
No 24
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.77 E-value=2.2e-18 Score=156.75 Aligned_cols=115 Identities=24% Similarity=0.399 Sum_probs=101.2
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+.+.. ...|++|+++|+.|+ ..|+.+.+.+|++.+.+.+.+ ++.|+|||++|.||||+++
T Consensus 33 ~~gi~~Vi~l~~~~~~~~~---~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~i~~~~~~--~~~vlVHC~~G~~Rsg~~~ 106 (150)
T 4erc_A 33 DLGVRHLVSLTERGPPHSD---SCPGLTLHRLRIPDF-CPPAPDQIDRFVQIVDEANAR--GEAVGVHCALGFGRTGTML 106 (150)
T ss_dssp HTTEEEEEECSSSCCTTGG---GCTTSEEEECCCCTT-SCCCHHHHHHHHHHHHHHHHT--TCEEEEECSSSSHHHHHHH
T ss_pred HCCCCEEEEcCCCCCCccc---ccCCceEEEEecCCC-CCCCHHHHHHHHHHHHHHHHC--CCCEEEECCCCCCHHHHHH
Confidence 4799999999987554322 336999999999997 688889999999999887764 5899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
|+|||...+|++++|++.+++.|+..+.++.+..+|++++.
T Consensus 107 a~~l~~~~~~~~~~a~~~vr~~R~~~~~~~~q~~~l~~~~~ 147 (150)
T 4erc_A 107 ACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQ 147 (150)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHSTTCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence 99999988999999999999999999999999999988764
No 25
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.77 E-value=3.3e-18 Score=155.49 Aligned_cols=115 Identities=24% Similarity=0.417 Sum_probs=99.9
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+ ++...++ ++.|+++|+.|+ ..|+.+.+.++++.+.+.+.+ +++|+|||++|+||||+++
T Consensus 34 ~~gi~~Vv~l~~~~e-~~~~~~~--~~~~~~~~~~d~-~~p~~~~~~~~~~~i~~~~~~--~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 34 DLGVRHLVSLTERGP-PHSDSCP--GLTLHRLRIPDF-CPPAPDQIDRFVQIVDEANAR--GEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp HTTEEEEEECSSSCC-TTGGGCT--TSEEEECCCCTT-CCCCHHHHHHHHHHHHHHHHT--TCEEEEECSSSSSHHHHHH
T ss_pred HCCCCEEEECCCCCC-CCHHHHh--hCCeEEEeCCCC-CCCCHHHHHHHHHHHHHHHhC--CCcEEEECCCCCChHHHHH
Confidence 479999999998754 3333443 567999999997 578888888999998887764 5899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
|+|||...|+++++|++.+++.|+..+.++.+..+|+.++.
T Consensus 108 ~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~ 148 (151)
T 2img_A 108 ACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQ 148 (151)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence 99999988999999999999999999999999999988765
No 26
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.75 E-value=5.1e-18 Score=154.02 Aligned_cols=113 Identities=14% Similarity=0.114 Sum_probs=92.3
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+.+. ..|++|+++|+.|....+-.+.+.+.++.+.+.++ .++.|+|||.+|.||||+++
T Consensus 27 ~~gI~~Vl~l~~~~~~~~-----~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~--~~~~VlVHC~~G~sRS~~~v 99 (144)
T 3s4e_A 27 KNKVTHILNVAYGVENAF-----LSDFTYKSISILDLPETNILSYFPECFEFIEEAKR--KDGVVLVHSNAGVSRAAAIV 99 (144)
T ss_dssp HTTCCEEEECSSSCCCCC-----TTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHH--TTCCEEEECSSSSSHHHHHH
T ss_pred HcCCCEEEEccCCCCCCC-----CCCCEEEEEeccCCCCCchHHHHHHHHHHHHHHHH--cCCeEEEEcCCCCchHHHHH
Confidence 479999999997544322 24899999999996433334455666666665554 35789999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHh
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRY 178 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y 178 (543)
+||||...+|++++|++.++++||...+++.|+.+|..+.
T Consensus 100 ~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e 139 (144)
T 3s4e_A 100 IGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQ 139 (144)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997654
No 27
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.75 E-value=3.7e-18 Score=177.04 Aligned_cols=112 Identities=21% Similarity=0.408 Sum_probs=98.3
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+. +.|+++.+++.|++|+++|+.|+ .+|+.+.+..|++.+. .++++|+|||++|+||||+++
T Consensus 216 ~~GI~~VInL~~--~~y~~~~~~~~gi~~~~ipi~D~-~~P~~~~~~~fi~~~~-----~~~~~VLVHC~aG~gRTGtvv 287 (348)
T 1ohe_A 216 NHNVTTIIRLNK--RMYDAKRFTDAGFDHHDLFFADG-STPTDAIVKEFLDICE-----NAEGAIAVHSKAGLGRTGTLI 287 (348)
T ss_dssp HTTEEEEEECSC--CSSCTHHHHTTTCEEEECCCCTT-CCCCHHHHHHHHHHHH-----SCSSEEEEECSSSSHHHHHHH
T ss_pred HcCCCEEEECCC--CcCChhhhhcCCcEEEEecCCCC-CCCCHHHHHHHHHHHH-----hCCCcEEEECCCCCChHHHHH
Confidence 468999999994 46888889889999999999996 6898888888877653 357899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCC--CHHHHHHHHHHh
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIY--KQDYLNELFRRY 178 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~--~~~yi~~L~~~y 178 (543)
|||||...||++++|++.++++||++|. ++.|+.+|..+.
T Consensus 288 aayLm~~~g~s~~eAl~~vr~~Rp~~i~~pnq~Fl~qL~~~~ 329 (348)
T 1ohe_A 288 ACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQTNL 329 (348)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence 9999998899999999999999999887 568999987543
No 28
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.75 E-value=1.9e-17 Score=155.71 Aligned_cols=133 Identities=17% Similarity=0.274 Sum_probs=99.4
Q ss_pred chhHh-cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCC
Q psy9353 54 NEKQT-RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFN 132 (543)
Q Consensus 54 ~~es~-~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~ 132 (543)
+.+.+ ..+|++||||+.+.+.+. ....|++|+++|+.|+...+-.+.+.++++.+.+.++ .++.|+|||++|+|
T Consensus 25 d~~~L~~~gI~~Vi~l~~e~p~~~---~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~~i~~~~~--~~~~VlVHC~aG~~ 99 (177)
T 2oud_A 25 DLDTMQRLNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQ--CGKGLLIHCQAGVS 99 (177)
T ss_dssp CHHHHHHTTEEEEEECCSSSCCTT---TTTTCSEEEECCCCCCSSCCCHHHHHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred CHHHHHHCCCcEEEEecCCCCccc---ccCCCceEEEEECCCCCcccHHHHHHHHHHHHHHHHh--cCCcEEEEcCCCCC
Confidence 34443 479999999997643321 2356999999999985322223344555555555443 46899999999999
Q ss_pred hhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhCC----CCCCCCCCCCC
Q psy9353 133 RTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYDD----VPCNLPAPPSY 191 (543)
Q Consensus 133 RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~~----~~~~~~~p~~~ 191 (543)
|||++++||||...||++++|++.++++||...++..|+.+|..+... .......|++.
T Consensus 100 RSg~~v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~p~~~ 162 (177)
T 2oud_A 100 RSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLM 162 (177)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTSSCCCCCTTSC
T ss_pred chHHHHHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcCCCCcccCcchh
Confidence 999999999999999999999999999999999999999998665542 22344556553
No 29
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.75 E-value=9e-18 Score=153.32 Aligned_cols=117 Identities=21% Similarity=0.270 Sum_probs=91.1
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFL 137 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ 137 (543)
..+|++||||+.+.+...++.++..|++|+++|+.|. ..++. +.+..+++.+.+.++. .++.|+|||++|+||||++
T Consensus 25 ~~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~-~~~~l~~~~~~~~~~i~~~~~~-~~~~vlVHC~aG~~RSg~~ 102 (151)
T 2e0t_A 25 RLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS-PAFDMSIHFQTAADFIHRALSQ-PGGKILVHCAVGVSRSATL 102 (151)
T ss_dssp HHTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS-TTSCTHHHHHHHHHHHHHHHHS-TTCCEEEECSSSSHHHHHH
T ss_pred HcCCCEEEEccCCcccCCccccCCCCeEEEEEecccC-CCccHHHHHHHHHHHHHHHHhc-CCCcEEEECCCCCChHHHH
Confidence 4789999999976543345545456999999999984 22321 3344555555554442 4689999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHh
Q psy9353 138 LISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRY 178 (543)
Q Consensus 138 ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y 178 (543)
++||||...||++++|++.++++|+ ..++..|+.+|..+-
T Consensus 103 ~~ayl~~~~~~~~~~a~~~v~~~R~-i~pn~~f~~qL~~~e 142 (151)
T 2e0t_A 103 VLAYLMLYHHLTLVEAIKKVKDHRG-IIPNRGFLRQLLALD 142 (151)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHTSC-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHH
Confidence 9999999999999999999999996 678999999986543
No 30
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=151.36 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=88.7
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCC-hHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPN-EKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFL 137 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~-~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ 137 (543)
..+|++||||+.+.+.+ + ..|++|+++|+.|.. .++ .+.+.+.++.+.+.++ .++.|+|||.+|+||||++
T Consensus 27 ~~gi~~Vi~l~~~~~~~----~-~~~~~~~~ipi~D~~-~~~l~~~~~~~~~fi~~~~~--~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 27 NRGVRYILNVTREIDNF----F-PGVFEYHNIRVYDEE-ATDLLAYWNDTYKFISKAKK--HGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp HTTEEEEEECCSSSCCS----C-BTTBEEEECCCCSST-TCCCGGGHHHHHHHHHHHHH--TTCEEEEECSSSSSHHHHH
T ss_pred HCCCCEEEEeCCCCccC----C-CCCcEEEEEEEeCCC-CCcHHHHHHHHHHHHHHHHH--cCCeEEEECCCCCchHHHH
Confidence 47999999999764322 2 258999999999852 333 2333344444444433 4689999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHh
Q psy9353 138 LISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRY 178 (543)
Q Consensus 138 ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y 178 (543)
++||||...+|++++|++.++++||...++..|+.+|.++.
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e 139 (145)
T 2nt2_A 99 VIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQ 139 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 99999998999999999999999999999999999997654
No 31
>3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens}
Probab=99.74 E-value=7e-18 Score=152.55 Aligned_cols=96 Identities=21% Similarity=0.315 Sum_probs=79.0
Q ss_pred cEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCC-----------CCcCCCCeEEEEEEEE-eccCC---
Q psy9353 283 YMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKD-----------PNKRLTNTLLDGEMVI-DRVQG--- 347 (543)
Q Consensus 283 y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~-----------~~~~~~~tlLDGElV~-d~~~~--- 347 (543)
|+++||+||+|+++++++ +++.|+||+++.+ +.+||+..+ +.....++|||||||+ +..++
T Consensus 1 f~~E~K~DG~R~q~~~~g-~~v~l~SR~g~d~---t~~fPel~~~~~l~~~i~~~~~~~~~~~iLDGEiv~~d~~~~~f~ 76 (139)
T 3vnn_A 1 FYIETKLDGERMQMHKDG-DVYKYFSRNGYNY---TDQFGASPTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFM 76 (139)
T ss_dssp CCCCCCCCCEEEEEEEET-TEEEEECSSCCBC---TTTSCSSTTC--CCSGGGSCCCTTCCEEEEEEEEEEEETTTTEEC
T ss_pred CEEEEEECeEEEEEEEEC-CEEEEEeCCCCCc---hhhccchhhhcchhHHHHHHHhccCCceEeeeEEEEecCCCCCHH
Confidence 789999999999999974 7999999999977 568997642 1223468999999999 32211
Q ss_pred ---------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhh
Q psy9353 348 ---------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEI 382 (543)
Q Consensus 348 ---------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i 382 (543)
+.++.|++||+|++||++++++||.+|+++|++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~vFDlL~l~G~~L~~~pl~eRr~~L~~l~ 126 (139)
T 3vnn_A 77 QKGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIF 126 (139)
T ss_dssp CC-------------CCEEEEEEEEEEEETTEECSSSCHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhhccCceEEEEEEEEEeECCcCcccCCHHHHHHHHHHHh
Confidence 23568999999999999999999999999999865
No 32
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.74 E-value=1.3e-17 Score=157.22 Aligned_cols=116 Identities=19% Similarity=0.317 Sum_probs=94.5
Q ss_pred cccceEEecccccccCC----ChhhhhcCCcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCCh
Q psy9353 59 RLKIGLWIDLTKTSRFY----DKSEVEENDIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCTHGFNR 133 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y----~~~~~~~~gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~R 133 (543)
..+|++||||+.+.++. +++.++..|+.|+++|+.|+. .|+. +.+.++++.+.+.+++ +++.|+|||.+|.||
T Consensus 51 ~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~-~~~~~~~~~~~~~~i~~~~~~-~~~~VlVHC~~G~~R 128 (183)
T 3f81_A 51 KLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQ-EFNLSAYFERAADFIDQALAQ-KNGRVLVHCREGYSR 128 (183)
T ss_dssp HHTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCST-TSCGGGGHHHHHHHHHHHHHS-TTCCEEEECSSSSSH
T ss_pred HCCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCC-cccHHHHHHHHHHHHHHHHHc-CCCeEEEECCCCcch
Confidence 47999999999875532 344566689999999999963 4443 4556666666666553 368999999999999
Q ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy9353 134 TGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRR 177 (543)
Q Consensus 134 TG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~ 177 (543)
||++++||||...+|++++|++.++++|+ ..++..|+.+|..+
T Consensus 129 Sg~~v~ayLm~~~~~~~~~A~~~v~~~R~-i~pn~~f~~qL~~~ 171 (183)
T 3f81_A 129 SPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQL 171 (183)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHH
Confidence 99999999999899999999999999998 78899999998654
No 33
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.74 E-value=2.1e-17 Score=153.28 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=91.4
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+.+ ...|++|+++|+.|+...+-.+.+..+++.+.+.++ .++.|+|||++|+||||+++
T Consensus 35 ~~gI~~Vi~l~~~~~~~-----~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~--~~~~VlVHC~aG~~RSg~~~ 107 (164)
T 2hcm_A 35 RAGITLCVNVSRQQPGP-----RAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVR--DGGSCLVYCKNGRSRSAAVC 107 (164)
T ss_dssp HTTEEEEEECSSSCCCC-----CCTTCEEEECCCCSCTTSCCHHHHHHHHHHHHHHHH--TTCEEEEEESSSSHHHHHHH
T ss_pred HCCCeEEEEcCCCCCCC-----CCCCCEEEEEeCcCCCCchHHHHHHHHHHHHHHHHH--cCCEEEEECCCCCchHHHHH
Confidence 47999999999865432 235899999999986322323344555555555444 36899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||...||++++|++.++++||...++..|+++|..+..
T Consensus 108 ~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~ 148 (164)
T 2hcm_A 108 TAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQ 148 (164)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999866554
No 34
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.73 E-value=9.1e-18 Score=154.47 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=90.1
Q ss_pred cccceEEecccccccCCChhhhhcCC-cEEEEEEecCCCCCCChH-HHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEEND-IAYIKIQCEGHKEAPNEK-QTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGF 136 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~g-i~y~~ip~~dhg~~P~~e-~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~ 136 (543)
..+|+.||||+.+. ++.+++.| +.|+++|+.|. ..|+.. .+.++++.+.+.++ .++.|+|||.+|+||||+
T Consensus 29 ~~gI~~Vi~l~~~~----~~~~~~~~~i~~~~ipi~D~-~~~~l~~~~~~~~~fi~~~~~--~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 29 KLGIRYILNVTPNL----PNFFEKNGDFHYKQIPISDH-WSQNLSRFFPEAIEFIDEALS--QNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp HTTEEEEEECSSSC----CCTTTTCTTCEEEECCCCGG-GGGGHHHHHHHHHHHHHHHHH--TTCEEEEECSSSSSHHHH
T ss_pred HCCCCEEEEeCCCC----cccccCCCCeEEEEEECccC-CCCCHHHHHHHHHHHHHHHHH--cCCcEEEECCCCCchhHH
Confidence 47999999999753 23355554 99999999985 344322 12333444444333 468999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 137 LLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 137 ~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+++||||...+|++++|++.++++||...+++.|+.+|.++..
T Consensus 102 vv~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~ 144 (155)
T 2hxp_A 102 VTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFER 144 (155)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 9999999988999999999999999999999999999987664
No 35
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.72 E-value=2.9e-17 Score=152.19 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=87.1
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhh--CCCCeEEEEcCCCCChhHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISK--SPLEKIGVHCTHGFNRTGF 136 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~--~~~~~V~VHC~~G~~RTG~ 136 (543)
..+|++|||++.+.+. .+ ..|++|+++|+.|. |.. .+..++..+.+|+.+ ..++.|+|||.+|.||||+
T Consensus 33 ~~gIt~Vlnl~~~~~~----~~-~~~~~~~~ipi~D~---~~~-~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~ 103 (161)
T 3emu_A 33 NNNISSILLVGIEVPS----LF-KDQCDILRLDIVSE---EGH-QLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPA 103 (161)
T ss_dssp HTTEEEEEEEC------------CTTSEEEEECCCCS---STT-HHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHH
T ss_pred HCCCCEEEEeCCCCcc----cc-CCCCEEEEEeCcCC---CCC-cHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHH
Confidence 4799999999975331 22 24899999999984 332 344444445556554 3568999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 137 LLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 137 ~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+++||||...+|++++|++.++++||...+++.|+.+|..+..
T Consensus 104 vv~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~ 146 (161)
T 3emu_A 104 IVIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEK 146 (161)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976543
No 36
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.72 E-value=1.7e-17 Score=160.50 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=103.4
Q ss_pred eeEEeecCCCCC-------CCchhHh-cccceEEeccccccc--CCC----hhhhhcCCcEEEEEEecCCCCCCChHHHH
Q psy9353 40 AYIKIQCEGHKE-------APNEKQT-RLKIGLWIDLTKTSR--FYD----KSEVEENDIAYIKIQCEGHKEAPNEKQTR 105 (543)
Q Consensus 40 ~~~Ki~c~gr~~-------~p~~es~-~~~i~~VIdLt~~~~--~y~----~~~~~~~gi~y~~ip~~dhg~~P~~e~i~ 105 (543)
......|+|... ..+.+.+ ..+|++||||+.+.+ .|. ++.+...|++|+++|+.|+ .+|+.+.+.
T Consensus 42 ~l~~~~~Pg~~~~~~~~~~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~-~~p~~~~~~ 120 (212)
T 1fpz_A 42 FLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCC 120 (212)
T ss_dssp EEEEESCTTCEETTEECCHHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHH
T ss_pred eEEEecCCCCCCccchhhHHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC-CCCCHHHHH
Confidence 344456666421 2233443 479999999997532 233 4456678999999999996 688888888
Q ss_pred HHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHH-hCCCCHHHHHHHHHhcC-CCCCCCHHHHHHHHH
Q psy9353 106 VFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVE-EMNFDVSAAIFAFSMAR-PPGIYKQDYLNELFR 176 (543)
Q Consensus 106 ~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~-~~~~s~~~Al~~~~~~R-~~~i~~~~yi~~L~~ 176 (543)
.|++.+.+.+.. ++.|+|||++|+||||+++|+|||. ..++++++|++.+++.| +.++.++.+...|++
T Consensus 121 ~~~~~i~~~~~~--~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~R~~~~~~~~~Q~~~l~~ 191 (212)
T 1fpz_A 121 EIMEELTTCLKN--YRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHE 191 (212)
T ss_dssp HHHHHHHHHHHT--TCCEEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTT
T ss_pred HHHHHHHHHHhC--CCCEEEECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 888888877663 5789999999999999999999999 57999999999999999 778887665555433
No 37
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.71 E-value=4.8e-17 Score=152.71 Aligned_cols=116 Identities=16% Similarity=0.197 Sum_probs=94.7
Q ss_pred hcccc--eEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhH
Q psy9353 58 TRLKI--GLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTG 135 (543)
Q Consensus 58 ~~~~i--~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG 135 (543)
...+| ++||||+.+.+.+. ..|++|+++|+.|....+-.+.+..+++.+.+.++. ++.|+|||.+|+||||
T Consensus 51 ~~~gI~~~~Ii~l~~~~~~~~-----~~~~~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~~RSg 123 (176)
T 3cm3_A 51 PSSEVKFKYVLNLTMDKYTLP-----NSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQR--NEPVLVHSAAGVNRSG 123 (176)
T ss_dssp GGSSSCCSEEEECSSSCCCCT-----TSCCEEEECCCCCSSSCCCGGGHHHHHHHHHHHHHH--TCCEEEECSSSSSHHH
T ss_pred HHcCCCCCEEEEecCCCCCcC-----CCCCEEEEEECCCCCcccHHHHHHHHHHHHHHHHHC--CCcEEEECCcCCCHHH
Confidence 45789 99999998754432 358999999999863333233355566666655544 5889999999999999
Q ss_pred HHHHHHHHHhCCCC-----HHHHHHHHHhcCCCCCCCHHHHHHHHHHhCC
Q psy9353 136 FLLISYLVEEMNFD-----VSAAIFAFSMARPPGIYKQDYLNELFRRYDD 180 (543)
Q Consensus 136 ~~ia~yLi~~~~~s-----~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~~ 180 (543)
+++++|||...+++ +++|++.+++.||..+++.+|+++|.+++..
T Consensus 124 ~~v~aylm~~~~~~~~~v~~~~A~~~vr~~R~~~~pn~~f~~qL~~~~~~ 173 (176)
T 3cm3_A 124 AMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVI 173 (176)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCccccHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999 9999999999999999999999999888763
No 38
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=99.71 E-value=3.2e-17 Score=155.03 Aligned_cols=112 Identities=14% Similarity=0.182 Sum_probs=88.9
Q ss_pred ccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHH
Q psy9353 60 LKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLI 139 (543)
Q Consensus 60 ~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia 139 (543)
.+|++|||++.+...+.. .+ .|++|+++|+.| ..|..+.+.+.++.+++.++ .++.|+|||.+|+||||++++
T Consensus 64 ~gIt~Vlnv~~e~~~~~~-~~--~~i~y~~ip~~d--~~~i~~~~~~~~~fI~~~~~--~g~~VLVHC~~G~sRS~tvv~ 136 (182)
T 2j16_A 64 LPFDVVINVAEEANDLRM-QV--PAVEYHHYRWEH--DSQIALDLPSLTSIIHAATT--KREKILIHAQCGLSRSATLII 136 (182)
T ss_dssp TTCSEEEECCSCC-----------CCEEEECCCSS--GGGGGGGHHHHHHHHHHHHH--TTCCEEEEESSCCSHHHHHHH
T ss_pred hCCCEEEEecCCCCCchh-cc--CCceEEEEecCC--CchHHHHHHHHHHHHHHHHh--cCCeEEEECCCCCChHHHHHH
Confidence 689999999987543322 12 389999999976 34544556666666666554 468999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHh
Q psy9353 140 SYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRY 178 (543)
Q Consensus 140 ~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y 178 (543)
||||...+|++++|++.++++||...++..|+.+|..+.
T Consensus 137 ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e 175 (182)
T 2j16_A 137 AYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175 (182)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999996654
No 39
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.71 E-value=5.5e-17 Score=156.87 Aligned_cols=113 Identities=15% Similarity=0.217 Sum_probs=92.5
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCC-hHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPN-EKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFL 137 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~-~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ 137 (543)
..+|++||||+.+.+. .+ ..|++|+++|+.|+. .|+ .+.+.++++.+++.++ .++.|+|||.+|+||||++
T Consensus 29 ~~GIt~VInl~~e~~~----~~-~~gi~y~~ipi~D~~-~~~l~~~~~~~~~fI~~~~~--~~~~VLVHC~aG~sRSgtv 100 (211)
T 2g6z_A 29 NLHITALLNVSRRTSE----AC-MTHLHYKWIPVEDSH-TADISSHFQEAIDFIDCVRE--KGGKVLVHSEAGISRSPTI 100 (211)
T ss_dssp HHTCCEEEECSSCCCC----TT-CTTSEEEECCCCSST-TSCCGGGHHHHHHHHHHHHH--TTCCEEEEESSSSSHHHHH
T ss_pred HCCCCEEEEcCCCCcc----cc-ccCCEEEEeeCCCCC-CCCHHHHHHHHHHHHHHHHh--cCCeEEEECCCCCCcHHHH
Confidence 4789999999976432 22 368999999999964 444 3455666666666554 3689999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 138 LISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 138 ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
++||||...+|++++|++.++++||....+..|+++|..+..
T Consensus 101 v~AYLm~~~g~s~~eAl~~vr~~Rp~i~pN~~f~~qL~~~e~ 142 (211)
T 2g6z_A 101 CMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYES 142 (211)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999866554
No 40
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.71 E-value=7.9e-17 Score=147.53 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=87.8
Q ss_pred cccceEEecccccccC-CChhhhhcCCcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHH
Q psy9353 59 RLKIGLWIDLTKTSRF-YDKSEVEENDIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGF 136 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~-y~~~~~~~~gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~ 136 (543)
..+|++||||+.+.+. +.+..+ ..|++|+++|+.|. ..++. +.+...++.+.+.++ .++.|+|||++|+||||+
T Consensus 31 ~~gI~~Vi~l~~~~e~~~~~~~~-~~~~~~~~ip~~d~-~~~~l~~~~~~~~~~i~~~~~--~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 31 KHGITHIICIRQNIEANFIKPNF-QQLFRYLVLDIADN-PVENIIRFFPMTKEFIDGSLQ--MGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp HTTCCEEEEEECGGGTTTSSCCC-TTTSEEEEEECCSS-TTSCCGGGHHHHHHHHHHHHH--TTCCEEEECSSSSSHHHH
T ss_pred HcCCeEEEEeCCccccccCCCCC-cCceeEEEEECCCC-CcccHHHHHHHHHHHHHHHHh--cCCCEEEEcCCCCChHHH
Confidence 5799999999976432 111122 25899999999984 22221 223333444444333 468999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy9353 137 LLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRR 177 (543)
Q Consensus 137 ~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~ 177 (543)
++++|||...|+++++|++.++++||...+++.|+.+|..+
T Consensus 107 ~~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~ 147 (154)
T 2r0b_A 107 FVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEY 147 (154)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHH
Confidence 99999999889999999999999999999999999999654
No 41
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.71 E-value=9.5e-17 Score=149.09 Aligned_cols=113 Identities=16% Similarity=0.211 Sum_probs=88.7
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.. + ...|++|+++|+.|....+-.+.+..+++.+.+.+. .++.|+|||++|+||||+++
T Consensus 30 ~~gI~~Vi~l~~~~~---~---~~~~i~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~--~~~~VlVHC~aG~~RSg~~~ 101 (165)
T 1wrm_A 30 KNKVTHILSVHDSAR---P---MLEGVKYLCIPAADSPSQNLTRHFKESIKFIHECRL--RGESCLVHCLAGVSRSVTLV 101 (165)
T ss_dssp HTTEEEEEECSTTCC---C---CSTTCEEEECCCCSSTTSCCGGGHHHHHHHHHHHHH--TTCEEEEECSSSSSHHHHHH
T ss_pred HCCCcEEEEecCCCC---C---CCCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHH--CCCeEEEECCCCCChhHHHH
Confidence 479999999997642 1 135899999999985222222334444444444433 46899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||...+|++++|++.++++||...+++.|+.+|..+..
T Consensus 102 ~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~ 142 (165)
T 1wrm_A 102 IAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK 142 (165)
T ss_dssp HHHHHHTSSCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCCcCCCHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999876554
No 42
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.71 E-value=7.8e-17 Score=148.76 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=89.6
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.. + + ..|++|+++|+.|+..++-.+.+..+++.+.+.++ .++.|+|||++|+||||+++
T Consensus 31 ~~gI~~Vi~l~~~~~---~--~-~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~--~~~~VlVHC~aG~~RSg~~~ 102 (160)
T 1yz4_A 31 RNKITHIISIHESPQ---P--L-LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRL--NGGNCLVHSFAGISRSTTIV 102 (160)
T ss_dssp HTTCCEEEEECSSCC---C--C-CTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHH--TTCCEEEEETTSSSHHHHHH
T ss_pred HCCCeEEEEccCCCC---C--c-cCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHH--cCCeEEEECCCCCchHHHHH
Confidence 478999999997532 1 1 25899999999986433322344555555555444 35889999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||...+|++++|++.++++||...++..|+++|..+..
T Consensus 103 ~aylm~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~ 143 (160)
T 1yz4_A 103 TAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGW 143 (160)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHTCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 99999989999999999999999999999999999865543
No 43
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.70 E-value=7.8e-17 Score=153.07 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=90.3
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLL 138 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~i 138 (543)
..+|++||||+.+.+. + ...|++|+++|+.|....+-.+.+...++.+.+.++ .++.|+|||.+|+||||+++
T Consensus 43 ~~gIt~Vi~l~~~~~~--~---~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~--~~~~VLVHC~aG~sRS~~vv 115 (188)
T 2esb_A 43 SNQITMVINVSVEVVN--T---LYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEM--KQGRTLLHCAAGVSRSAALC 115 (188)
T ss_dssp HTTCCEEEECCSSCCC--C---CCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHH--TTCCEEEECSSSSSHHHHHH
T ss_pred HCCCcEEEEecCCCCC--c---CCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHH--cCCEEEEECCCCCchHHHHH
Confidence 5799999999976432 1 125899999999985323323344444555544443 46899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 139 ISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 139 a~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||...+|++++|++.++++||...++..|+.+|..+..
T Consensus 116 ~ayLm~~~~~s~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~ 156 (188)
T 2esb_A 116 LAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEF 156 (188)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999966654
No 44
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=151.79 Aligned_cols=113 Identities=16% Similarity=0.081 Sum_probs=91.1
Q ss_pred cccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHH
Q psy9353 59 RLKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFL 137 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ 137 (543)
..+|++||||+.+.+. + . ..|+.|+++|+.|+. .|+. +.+..+++.+.+.++ .++.|+|||++|+||||++
T Consensus 49 ~~gI~~Vi~l~~~~~~--~--~-~~gi~y~~ipi~D~~-~~~l~~~~~~~~~fi~~~~~--~~~~VlVHC~aG~~RSgtv 120 (190)
T 2wgp_A 49 ARGITCIVNATIEIPN--F--N-WPQFEYVKVPLADMP-HAPIGLYFDTVADKIHSVSR--KHGATLVHCAAGVSRSATL 120 (190)
T ss_dssp HTTCCEEEECCSSSCC--C--C-CTTSEEEECCCCSST-TSCGGGGHHHHHHHHHHHHH--TTCCEEEECSSSSSHHHHH
T ss_pred HCCCcEEEEecCCCCC--C--C-CCCCEEEEEEcccCC-CCCHHHHHHHHHHHHHHHHh--cCCCEEEECCCCCCHHHHH
Confidence 4789999999976432 1 1 248999999999963 4443 444555555555544 3688999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 138 LISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 138 ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
++||||...+|++++|++.++++||...++..|+++|..+..
T Consensus 121 v~ayLm~~~~~s~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~ 162 (190)
T 2wgp_A 121 CIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYER 162 (190)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999976554
No 45
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=155.27 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=90.9
Q ss_pred cccceEEeccccccc-CC-ChhhhhcCCcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhH
Q psy9353 59 RLKIGLWIDLTKTSR-FY-DKSEVEENDIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTG 135 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~-~y-~~~~~~~~gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG 135 (543)
..+|++||||+.+.. .. .++.+...|+.|+++|+.|. ..++. +.+..+++.+.+.+. ..++.|+|||++|+||||
T Consensus 77 ~~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~-~~~~l~~~~~~~~~fI~~~l~-~~~~~VLVHC~aG~sRS~ 154 (219)
T 2y96_A 77 KAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDL-PTFDLSVFFYPAAAFIDRALS-DDHSKILVHCVMGRSRSA 154 (219)
T ss_dssp HTTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSS-TTSCGGGGHHHHHHHHHHHHT-STTCCEEEECSSSSSHHH
T ss_pred HCCCeEEEECCCCccccccchhhhcccCcEEEEEECCCC-CchhHHHHHHHHHHHHHHHHH-ccCCeEEEECCCCCCHHH
Confidence 478999999996532 11 13334567999999999984 23332 334455555555542 246899999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 136 FLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 136 ~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
++++||||...+|++++|++.++++|+ ..++..|+.+|..+..
T Consensus 155 tvv~aYLm~~~~~s~~eAl~~vr~~R~-i~pn~~f~~qL~~~e~ 197 (219)
T 2y96_A 155 TLVLAYLMIHKDMTLVDAIQQVAKNRC-VLPNRGFLKQLRELDK 197 (219)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHTTSC-CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHhCC-CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999996 7789999999866554
No 46
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.68 E-value=4.2e-17 Score=150.02 Aligned_cols=115 Identities=21% Similarity=0.254 Sum_probs=94.1
Q ss_pred cccceEEecccccccCCC-h-------hhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCC
Q psy9353 59 RLKIGLWIDLTKTSRFYD-K-------SEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHG 130 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~-~-------~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G 130 (543)
..+|++||||+.+.+... + +.++..|++|+++|+.|+ ..|+.+.+.+|++.+.+... .. +|||++|
T Consensus 26 ~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~-~~p~~~~~~~~~~~i~~~~~----~~-lVHC~aG 99 (161)
T 2i6j_A 26 KEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG-GVPSDSQFLTIMKWLLSEKE----GN-LVHCVGG 99 (161)
T ss_dssp HHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHCCT----TE-EEECSSS
T ss_pred HCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC-CCCChHHHHHHHHHHHHhCC----CC-EEECCCC
Confidence 479999999997643211 1 226668999999999997 57887777777776655332 23 9999999
Q ss_pred CChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 131 FNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 131 ~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+||||+++|+|||...++++++|++.+++.|+..+.++.+..+|+.+..
T Consensus 100 ~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~ 148 (161)
T 2i6j_A 100 IGRTGTILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEG 148 (161)
T ss_dssp SHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHHHHHHHhCcccCCCHHHHHHHHHHHH
Confidence 9999999999999988999999999999999999999999998877654
No 47
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.68 E-value=2.9e-16 Score=150.07 Aligned_cols=116 Identities=17% Similarity=0.220 Sum_probs=94.6
Q ss_pred hcccc--eEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhH
Q psy9353 58 TRLKI--GLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTG 135 (543)
Q Consensus 58 ~~~~i--~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG 135 (543)
...+| +.||||+.+.+.+ ...|++|+++|+.|....+-.+.+..+++.+...++ .+++|+|||++|+||||
T Consensus 68 ~~~gI~~~~Vi~l~~~~~~~-----~~~~~~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~--~~~~VlVHC~aG~~RSg 140 (195)
T 2q05_A 68 PSSEVKFKYVLNLTMDKYTL-----PNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQ--RNEPVLVHCAAGVNRSG 140 (195)
T ss_dssp TTSSSCCSEEEECSSSCCCC-----TTCCCEEEECCCCCSSSCCCGGGHHHHHHHHHHHHH--TTCCEEEECSSSSSHHH
T ss_pred HhCCCCCCEEEEECCCCCCc-----ccCCcEEEEEEcCCCCcccHHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCChHH
Confidence 45789 9999999865332 236899999999985323323345556666655544 35789999999999999
Q ss_pred HHHHHHHHHhCCCC-----HHHHHHHHHhcCCCCCCCHHHHHHHHHHhCC
Q psy9353 136 FLLISYLVEEMNFD-----VSAAIFAFSMARPPGIYKQDYLNELFRRYDD 180 (543)
Q Consensus 136 ~~ia~yLi~~~~~s-----~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~~ 180 (543)
+++|+|||...+++ +++|++.++++||..+++..|+++|.++|..
T Consensus 141 ~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~R~~~~~n~~f~~qL~~~~~~ 190 (195)
T 2q05_A 141 AMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVI 190 (195)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCccccCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHh
Confidence 99999999988999 9999999999999999999999999999875
No 48
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.66 E-value=5.4e-16 Score=149.30 Aligned_cols=116 Identities=19% Similarity=0.285 Sum_probs=88.1
Q ss_pred cccceEEecccccccCCC--hhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhh---CCCCeEEEEcCCCCCh
Q psy9353 59 RLKIGLWIDLTKTSRFYD--KSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISK---SPLEKIGVHCTHGFNR 133 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~--~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~---~~~~~V~VHC~~G~~R 133 (543)
..+|++||||+.+....+ ...++..|++|+++|+.| .|+.+.+..|.+.+ +|+.+ ..++.|+|||.+|+||
T Consensus 69 ~~gIt~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D---~p~~dl~~~f~~~~-~fI~~~l~~~~~~VLVHC~aG~sR 144 (205)
T 2pq5_A 69 QLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD---NPFFDLSVYFLPVA-RYIRAALSVPQGRVLVHCAMGVSR 144 (205)
T ss_dssp HHTCCEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCC---CTTSCGGGGHHHHH-HHHHHHHTSTTCCEEEECSSSSSH
T ss_pred HcCCeEEEEeCCCcccCCcchhhhccCCceEEeeecCC---CCcchHHHHHHHHH-HHHHHHHhcCCCeEEEECCCCCcH
Confidence 479999999997532222 123455689999999987 34444333333322 34433 2568999999999999
Q ss_pred hHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 134 TGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 134 TG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
||++++||||...+|++++|++.++++|+ ..++..|+.+|..+..
T Consensus 145 S~tvv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~gf~~qL~~~e~ 189 (205)
T 2pq5_A 145 SATLVLAFLMIYENMTLVEAIQTVQAHRN-ICPNSGFLRQLQVLDN 189 (205)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTSC-CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999997 5689999999966543
No 49
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.56 E-value=3.4e-15 Score=151.51 Aligned_cols=118 Identities=15% Similarity=0.181 Sum_probs=89.8
Q ss_pred cccceEEeccccccc--CC--Chhh----hhcC-CcEEEEEEecCCCCCCCh-HHHHHHHHHHHHHHhhCCCCeEEEEcC
Q psy9353 59 RLKIGLWIDLTKTSR--FY--DKSE----VEEN-DIAYIKIQCEGHKEAPNE-KQTRVFINLCSKFISKSPLEKIGVHCT 128 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~--~y--~~~~----~~~~-gi~y~~ip~~dhg~~P~~-e~i~~f~~~v~~fl~~~~~~~V~VHC~ 128 (543)
..+|++||||+.+.+ ++ +... .+.. |+.|+++|+.|+ ..|+. +.+.+.++.+.+.+++ .+++|+|||+
T Consensus 37 ~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~-~~~~l~~~~~~~~~~I~~~l~~-~g~~VLVHC~ 114 (294)
T 3nme_A 37 KIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDF-DAFDLRMRLPAVVGTLYKAVKR-NGGVTYVHST 114 (294)
T ss_dssp HTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTT-CHHHHHHHHHHHHHHHHHHHHH-HCSEEEEECS
T ss_pred HCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCC-CCCCHHHHHHHHHHHHHHHHHh-CCCEEEEECC
Confidence 469999999997543 11 2222 2444 799999999996 44443 4455666666666543 3689999999
Q ss_pred CCCChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHH-HHHhC
Q psy9353 129 HGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNEL-FRRYD 179 (543)
Q Consensus 129 ~G~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L-~~~y~ 179 (543)
+|+||||++++||||...+|++++|++.++++||. .++..++.+. +....
T Consensus 115 aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~Rp~-~Pn~~~l~~~~~~~L~ 165 (294)
T 3nme_A 115 AGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC-FPKLDAIRNATIDILT 165 (294)
T ss_dssp SSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHhCCCHHHHHHHHHHhCCC-CCChhhhhHHHHHhhh
Confidence 99999999999999999999999999999999998 7787777665 44333
No 50
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.53 E-value=2.2e-15 Score=137.41 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=76.3
Q ss_pred cccceEEecccccccCCC-hhhhhcCCcEEEEEEecCCCC---CCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChh
Q psy9353 59 RLKIGLWIDLTKTSRFYD-KSEVEENDIAYIKIQCEGHKE---APNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRT 134 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~-~~~~~~~gi~y~~ip~~dhg~---~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RT 134 (543)
..+|++||||+.+.+... ++.++..|++|+++|+.|+.. .++.+.+.++++.+ ....+++|+|||++|+|||
T Consensus 31 ~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i----~~~~~~~vlvHC~aG~~RT 106 (151)
T 1xri_A 31 TLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVL----LDEKNHPVLIHCKRGKHRT 106 (151)
T ss_dssp HHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHH----HCGGGCSEEEECSSSSSHH
T ss_pred HCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHH----HcCCCCCEEEECCCCCCHH
Confidence 468999999997643211 223445799999999998521 23445555555544 2335689999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhcCCCC
Q psy9353 135 GFLLISYLVEEMNFDVSAAIFAFSMARPPG 164 (543)
Q Consensus 135 G~~ia~yLi~~~~~s~~~Al~~~~~~R~~~ 164 (543)
|+++|+||+. .||+.++|++.++..|++.
T Consensus 107 g~~~a~~l~~-~g~~~~~a~~~~~~~~~~~ 135 (151)
T 1xri_A 107 GCLVGCLRKL-QKWCLTSIFDEYQRFAAAK 135 (151)
T ss_dssp HHHHHHHHHH-TTBCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHhcCCC
Confidence 9999998874 6999999999999999874
No 51
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=99.26 E-value=2e-11 Score=123.42 Aligned_cols=100 Identities=12% Similarity=0.199 Sum_probs=80.5
Q ss_pred hhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHH-HHhCCCCHHHHHH
Q psy9353 77 KSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYL-VEEMNFDVSAAIF 155 (543)
Q Consensus 77 ~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yL-i~~~~~s~~~Al~ 155 (543)
.+.++..|++|+++|++|| .+|+.+.+.+|++.+.. + ..+..|+|||.+|.||||+++|+|+ +...+++++++++
T Consensus 174 ~e~~~~~Gl~Y~rlPi~D~-~aP~~e~id~fl~~v~~-l--~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~eeii~ 249 (314)
T 3mmj_A 174 QEVAEAAGMRYFRIAATDH-VWPTPENIDRFLAFYRT-L--PQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDILY 249 (314)
T ss_dssp HHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHHHT-C--CTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred HHHHHhCCCEEEEeCcCCC-CCCCHHHHHHHHHHHHH-c--CCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHHHHHH
Confidence 3457789999999999998 59999999999987765 2 2458899999999999999999994 4556899999999
Q ss_pred HHHhcCCCCCC-------------------CHHHHHHHHHHhCC
Q psy9353 156 AFSMARPPGIY-------------------KQDYLNELFRRYDD 180 (543)
Q Consensus 156 ~~~~~R~~~i~-------------------~~~yi~~L~~~y~~ 180 (543)
.++...+.-+. +-.||..+|+|..+
T Consensus 250 r~~~lgg~~~~~~~~~~~~~~~~k~~~~~~r~~fl~~Fy~Y~~~ 293 (314)
T 3mmj_A 250 RQHEIGGFYYGEFPIKTKDKDSWKTKYYREKIVMIEQFYRYVQE 293 (314)
T ss_dssp HHHHTTSCCCSCCCCCCCGGGTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccccccccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 99988763211 12677778877654
No 52
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.15 E-value=1e-10 Score=107.29 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=74.6
Q ss_pred cccceEEecccccccCCC-h------hhhhcCCcE-EEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCC
Q psy9353 59 RLKIGLWIDLTKTSRFYD-K------SEVEENDIA-YIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHG 130 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~-~------~~~~~~gi~-y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G 130 (543)
..++..||||+...+..+ + +..+..||. |+++|+.+. .|+.+.+..|.+.+. . .+++|+|||++|
T Consensus 40 ~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~--~~~~~~~~~~~~~l~----~-~~~pVlvHC~sG 112 (156)
T 2f46_A 40 QLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR--DIQKHDVETFRQLIG----Q-AEYPVLAYCRTG 112 (156)
T ss_dssp HHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT--TCCHHHHHHHHHHHH----T-SCSSEEEECSSS
T ss_pred HCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC--CCCHHHHHHHHHHHH----h-CCCCEEEECCCC
Confidence 478999999996544321 1 124557999 999999873 778787877776653 2 368999999999
Q ss_pred CChhHHHHHHHHHHhCCCCHHHHHHHHHhcC
Q psy9353 131 FNRTGFLLISYLVEEMNFDVSAAIFAFSMAR 161 (543)
Q Consensus 131 ~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R 161 (543)
. ||++++++||+. .||+.++|++.++++.
T Consensus 113 ~-Rs~~l~al~l~~-~g~~~~~a~~~~~~~g 141 (156)
T 2f46_A 113 T-RCSLLWGFRRAA-EGMPVDEIIRRAQAAG 141 (156)
T ss_dssp H-HHHHHHHHHHHH-TTCCHHHHHHHHHHTT
T ss_pred C-CHHHHHHHHHHH-cCCCHHHHHHHHHHcC
Confidence 9 999999999987 6999999999999874
No 53
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=99.10 E-value=2.7e-10 Score=124.23 Aligned_cols=101 Identities=17% Similarity=0.316 Sum_probs=80.6
Q ss_pred ChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-CCCCHHHHH
Q psy9353 76 DKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-MNFDVSAAI 154 (543)
Q Consensus 76 ~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-~~~s~~~Al 154 (543)
..+.++..|+.|+++|++|| .+|+.+.+..|++.+.. + ..+..|+|||.+|.||||+++|+|+|.+ .++|+++||
T Consensus 490 e~e~~~~~Gi~Y~Ripi~D~-~aP~~e~id~fl~~v~~-l--p~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~dii 565 (629)
T 3f41_A 490 EQQLVEKNGLHYYRIAATDH-IWPSAANIDEFINFTRT-M--PANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDIL 565 (629)
T ss_dssp HHHHHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHHHH-S--CTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred HHHHHHhCCCEEEEeCCCCC-CCCCHHHHHHHHHHHHh-c--CCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHHH
Confidence 34467889999999999997 69999999999998887 3 3358899999999999999999996654 479999999
Q ss_pred HHHHhcCCCCC-----------C-------CHHHHHHHHHHhCC
Q psy9353 155 FAFSMARPPGI-----------Y-------KQDYLNELFRRYDD 180 (543)
Q Consensus 155 ~~~~~~R~~~i-----------~-------~~~yi~~L~~~y~~ 180 (543)
+.....-+..+ + +-.||..+|+|..+
T Consensus 566 ~rq~~lgg~~l~~~~~~~~~~~~k~~~~~~R~~fl~~FY~Y~~~ 609 (629)
T 3f41_A 566 SRQYLLGGNYVAYEIAKPKPDQWKADYYHQKAHMIEKFYQYVQE 609 (629)
T ss_dssp HHHHHHTSCCTTCCCSSCCTTCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhCceecccccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 97776543211 1 13677778877775
No 54
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=99.04 E-value=5e-10 Score=122.16 Aligned_cols=101 Identities=11% Similarity=0.294 Sum_probs=80.1
Q ss_pred ChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhC--CCCHHHH
Q psy9353 76 DKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEM--NFDVSAA 153 (543)
Q Consensus 76 ~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~--~~s~~~A 153 (543)
..+.++..|+.|+++|++|| .+|+.+.+..|++.|.. + ..+..|+|||.+|.||||+++|+|+|.+. ++++++|
T Consensus 192 E~el~~~~Gl~Y~Ripi~D~-~~P~~e~id~fl~~v~~-l--~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~di 267 (629)
T 3f41_A 192 EEEMVKQHGANYFRLTLQDH-FRPDDPDVDKFLEFYKS-L--PKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDI 267 (629)
T ss_dssp HHHHHHTTTCEEEEEEECTT-SCCCHHHHHHHHHHHHT-S--CTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred HHHHHHhCCCeEEEccCCCC-CCCCHHHHHHHHHHHHh-c--CCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHHH
Confidence 33457889999999999997 69999999999998876 3 24589999999999999999999988764 6899999
Q ss_pred HHHHHhcCCCCCC----------------CHHHHHHHHHHhCC
Q psy9353 154 IFAFSMARPPGIY----------------KQDYLNELFRRYDD 180 (543)
Q Consensus 154 l~~~~~~R~~~i~----------------~~~yi~~L~~~y~~ 180 (543)
|+..+..-+.-+. +-.||..+|+|..+
T Consensus 268 I~Rq~~lgg~~~~~~~~~~~~~~~~~~~~R~~fl~~Fy~Y~~~ 310 (629)
T 3f41_A 268 IQRQKLIGIVDLSEIPDKKKNYGRKAYIERYQFVQHFYDYVKE 310 (629)
T ss_dssp HHHHHHHSSCCTTCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 9877765442111 12477777877765
No 55
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=99.04 E-value=3.3e-10 Score=114.22 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=67.2
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHH----HhCC----CCHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLV----EEMN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi----~~~~----~s~~~Al 154 (543)
|.++++ +++||+.|++...+..|+..+....+. ..+++|+|||.+|.||||++||++++ ...| +++.+|+
T Consensus 167 V~h~~~~~WpD~~vP~~~~~~l~~~~~v~~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~l~~l~~~g~~~~vdv~~~v 246 (284)
T 1fpr_A 167 IWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTI 246 (284)
T ss_dssp EEECCBCCSCTTSCCSCSHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCceecHHHHH
Confidence 444444 578987655678888999988876544 24689999999999999999999854 3334 6899999
Q ss_pred HHHHhcCCCCCCCHH
Q psy9353 155 FAFSMARPPGIYKQD 169 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~ 169 (543)
..+++.|+..+.+..
T Consensus 247 ~~lR~qR~~~Vqt~~ 261 (284)
T 1fpr_A 247 QMVRAQRSGMVQTEA 261 (284)
T ss_dssp HHHHTTSTTSSCSSH
T ss_pred HHHHhhCCCCCCCHH
Confidence 999999999998754
No 56
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=99.03 E-value=2.2e-10 Score=113.55 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=70.9
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~ 158 (543)
+.++++ .++|||.|++...+..|+..+.+..+...+++|+|||.+|.||||+++|++++.. ..+++.+++..++
T Consensus 140 V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~pivVHCsaGvGRTGtfia~~~~~~~l~~~~~vdv~~~v~~lR 219 (253)
T 1p15_A 140 IRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLR 219 (253)
T ss_dssp EEEEEECCSCSSSCCSSSCSHHHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSCCCTTHHHHHHH
T ss_pred EEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 455555 4789876556667788888777654444568999999999999999999986643 2578999999999
Q ss_pred hcCCCCCCCHH---HHHHHHHHh
Q psy9353 159 MARPPGIYKQD---YLNELFRRY 178 (543)
Q Consensus 159 ~~R~~~i~~~~---yi~~L~~~y 178 (543)
+.|+..+.... |+-+....|
T Consensus 220 ~qR~~~Vqt~~Qy~f~y~~~~~~ 242 (253)
T 1p15_A 220 LQRPHMVQTLEQYEFCYKVVQEY 242 (253)
T ss_dssp TTSTTSSCSTTTTHHHHHHHHHT
T ss_pred HhCccccCCHHHHHHHHHHHHHH
Confidence 99999998764 444433333
No 57
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=99.01 E-value=8e-10 Score=111.80 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=68.5
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhC-CCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKS-PLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~-~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~ 157 (543)
+.++++. ++|||.|++.+.+..|+..+.+++.+. ..++|+|||.+|.||||++||++++.. ..+++.+++..+
T Consensus 181 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~l 260 (291)
T 2hc1_A 181 IRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDL 260 (291)
T ss_dssp EEEEEECCCCSSSCCSCHHHHHHHHHHHHHHHHHSSCCCCEEEECSSSSHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHH
T ss_pred EEEeeecCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCchhHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 4555555 689976667888999999998887553 468999999999999999999987642 246899999999
Q ss_pred HhcCCCCCCCHH
Q psy9353 158 SMARPPGIYKQD 169 (543)
Q Consensus 158 ~~~R~~~i~~~~ 169 (543)
++.|+..+....
T Consensus 261 R~qR~~~Vqt~~ 272 (291)
T 2hc1_A 261 RLHRVHMVQTEC 272 (291)
T ss_dssp HTTSTTSSCCC-
T ss_pred HHhCcccCCCHH
Confidence 999999998754
No 58
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=98.99 E-value=7.2e-10 Score=116.26 Aligned_cols=93 Identities=15% Similarity=0.219 Sum_probs=73.3
Q ss_pred CcEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-------CCCCeEEEEcCCCCChhHHHHHHHHHHhC-CCCHHHHH
Q psy9353 84 DIAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-------SPLEKIGVHCTHGFNRTGFLLISYLVEEM-NFDVSAAI 154 (543)
Q Consensus 84 gi~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-------~~~~~V~VHC~~G~~RTG~~ia~yLi~~~-~~s~~~Al 154 (543)
.|.+++++ ++||+.+++.+.+..|+..+.+.... ...++|+|||.+|.||||++||+++++.. .+++.+++
T Consensus 270 ~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~~v 349 (383)
T 1g4w_R 270 TIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVR 349 (383)
T ss_dssp EEEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred EEEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHHHH
Confidence 46677777 89997655677777888777665322 12467899999999999999999999875 47999999
Q ss_pred HHHHhcCCC-CCCCHHHHHHHHH
Q psy9353 155 FAFSMARPP-GIYKQDYLNELFR 176 (543)
Q Consensus 155 ~~~~~~R~~-~i~~~~yi~~L~~ 176 (543)
..+++.|++ .+.+......+|+
T Consensus 350 ~~lR~qR~g~~Vqt~~Qy~fl~~ 372 (383)
T 1g4w_R 350 ADFRDSRNNRMLEDASQFVQLKA 372 (383)
T ss_dssp HHHHHHTCTTTTCCHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCHHHHHHHHH
Confidence 999999996 9998765555544
No 59
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=98.98 E-value=1.7e-09 Score=110.67 Aligned_cols=90 Identities=16% Similarity=0.194 Sum_probs=69.7
Q ss_pred cEEEE-EEecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHH----HhCC----CCHHHHH
Q psy9353 85 IAYIK-IQCEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLV----EEMN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~-ip~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi----~~~~----~s~~~Al 154 (543)
|.+++ .+++|||.|++.+.+..|+..+....+. ..+++|+|||.+|.||||++||++++ ...| +++.+|+
T Consensus 202 V~h~~y~~WpD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~g~~~~vdv~~~v 281 (316)
T 3b7o_A 202 VWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 281 (316)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHHHTSTTCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHH
T ss_pred EEEeeccCcccCCCCCChHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCccCHHHHH
Confidence 33444 4588997666668888999988876544 34689999999999999999998854 2234 6899999
Q ss_pred HHHHhcCCCCCCCHHHHHHH
Q psy9353 155 FAFSMARPPGIYKQDYLNEL 174 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~yi~~L 174 (543)
..+++.|+..+........+
T Consensus 282 ~~lR~qR~~~Vqt~~Qy~fi 301 (316)
T 3b7o_A 282 QMVRSQRSGMVQTEAQYRFI 301 (316)
T ss_dssp HHHHTTSTTCSCSHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHH
Confidence 99999999999987544443
No 60
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=98.96 E-value=2.6e-09 Score=108.72 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=68.1
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHH----HHHhCC----CCHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISY----LVEEMN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~y----Li~~~~----~s~~~Al 154 (543)
|.+++++ ++|||.|++...+..|+..+.+.... ..+++|+|||.+|.||||++||++ +++..+ +++.+++
T Consensus 177 V~h~~y~~WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v 256 (304)
T 2cm2_A 177 ILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256 (304)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHH
T ss_pred EEEeeECCcCcCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCcCCchhhHHHHHHHHHHHHHhcCCCcccCHHHHH
Confidence 4455543 68987665677788888777654222 246899999999999999999975 556553 7999999
Q ss_pred HHHHhcCCCCCCCHHHHHHH
Q psy9353 155 FAFSMARPPGIYKQDYLNEL 174 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~yi~~L 174 (543)
..+++.|+..+.......-+
T Consensus 257 ~~lR~qR~~~Vqt~~Qy~fi 276 (304)
T 2cm2_A 257 LEMRKFRMGLIQTADQLRFS 276 (304)
T ss_dssp HHHTTTSTTCSCSHHHHHHH
T ss_pred HHHHHhcccccCCHHHHHHH
Confidence 99999999999987644433
No 61
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=98.95 E-value=2.2e-09 Score=108.80 Aligned_cols=88 Identities=14% Similarity=0.134 Sum_probs=68.7
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHHH----h-CCCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLVE----E-MNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi~----~-~~~s~~~Al~~~ 157 (543)
|.++++. ++|||.|++...+..|+..+....+. ..+++|+|||.+|.||||++||++++. . ..+++.+++..+
T Consensus 185 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia~~~~~~~l~~~~~vdv~~~v~~l 264 (297)
T 1jln_A 185 VKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQL 264 (297)
T ss_dssp EEEEEECCSCTTSSCSCSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHH
T ss_pred EEEccccCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCchhhHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 4455554 78987666677888888888775443 346899999999999999999998642 2 346999999999
Q ss_pred HhcCCCCCCCHHHHH
Q psy9353 158 SMARPPGIYKQDYLN 172 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~ 172 (543)
++.|+..+.......
T Consensus 265 R~qR~~~Vqt~~Qy~ 279 (297)
T 1jln_A 265 RVDRGGMVQTSEQYE 279 (297)
T ss_dssp HHHSTTSSCSHHHHH
T ss_pred HHhCcCcCCcHHHHH
Confidence 999999999875333
No 62
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=98.94 E-value=2.3e-09 Score=108.26 Aligned_cols=87 Identities=16% Similarity=0.178 Sum_probs=66.5
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHH----HHhC-CCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYL----VEEM-NFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yL----i~~~-~~s~~~Al~~~~ 158 (543)
+.++++ .++|||.|++.+.+..|+..+.+... .+++|+|||.+|.||||+++|+++ ++.. .+++.+++..++
T Consensus 175 V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~~~--~~~PivVHCsaGvGRTGtfia~d~~~~~l~~~~~v~~~~~v~~lR 252 (287)
T 2b49_A 175 VTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRV--DSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMR 252 (287)
T ss_dssp EEEEEECCSCSSSCCSSCHHHHHHHHHHHHHCC--TTCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred EEEEeeccCCCCCCCCCHHHHHHHHHHHHHhcc--CCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 444443 47898766567778888887766432 358999999999999999999863 3443 379999999999
Q ss_pred hcCCCCCCCHHHHHH
Q psy9353 159 MARPPGIYKQDYLNE 173 (543)
Q Consensus 159 ~~R~~~i~~~~yi~~ 173 (543)
+.|+..+........
T Consensus 253 ~qR~~~Vqt~~Qy~f 267 (287)
T 2b49_A 253 DQRAMMVQTSSQYKF 267 (287)
T ss_dssp TTSTTCSCSHHHHHH
T ss_pred HhcccccCCHHHHHH
Confidence 999999998754443
No 63
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=98.93 E-value=3.2e-09 Score=107.20 Aligned_cols=86 Identities=15% Similarity=0.167 Sum_probs=68.8
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHHH----hCC----CCHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLVE----EMN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi~----~~~----~s~~~Al 154 (543)
+.++++. ++|||.|++...+..|+..+....+. ...++|+|||.+|.||||++||++++- ..+ +++.+++
T Consensus 169 V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v 248 (288)
T 4grz_A 169 IWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTI 248 (288)
T ss_dssp EEEEEECSCCTTSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHH
T ss_pred EEEEEeCCcCcCCcccChHHHHHHHHHHHHHHhhcCCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 4444443 78987666778899999998877654 346899999999999999999998652 224 7899999
Q ss_pred HHHHhcCCCCCCCHHH
Q psy9353 155 FAFSMARPPGIYKQDY 170 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~y 170 (543)
..+++.|+..+.....
T Consensus 249 ~~lR~qR~~~Vqt~~Q 264 (288)
T 4grz_A 249 QMVRAQRSGMVQTEAQ 264 (288)
T ss_dssp HHHHTTSTTCSCSHHH
T ss_pred HHHHHhcccccCCHHH
Confidence 9999999999998753
No 64
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=98.93 E-value=4.8e-09 Score=107.70 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=66.1
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHh---------hCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHH
Q psy9353 92 CEGHKEAPNEKQTRVFINLCSKFIS---------KSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAF 157 (543)
Q Consensus 92 ~~dhg~~P~~e~i~~f~~~v~~fl~---------~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~ 157 (543)
++|||.|++...+..|++.+....+ ....++|+|||.+|.||||++||++++.. ..+++.+++..+
T Consensus 215 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 294 (325)
T 2bzl_A 215 WPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLL 294 (325)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 7899866677778888877765542 23468999999999999999999986633 257999999999
Q ss_pred HhcCCCCCCCHHHHHHHH
Q psy9353 158 SMARPPGIYKQDYLNELF 175 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~~L~ 175 (543)
++.|+..+.......-+|
T Consensus 295 R~qR~~~Vqt~~QY~Fiy 312 (325)
T 2bzl_A 295 REQRMFMIQTIAQYKFVY 312 (325)
T ss_dssp HTTSTTCSCSHHHHHHHH
T ss_pred HHhcccCCCCHHHHHHHH
Confidence 999999999875444433
No 65
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=98.91 E-value=2.9e-09 Score=108.28 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=66.4
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh----CC---CCHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE----MN---FDVSAAIFA 156 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~----~~---~s~~~Al~~ 156 (543)
+.|+++. ++|||.|++...+..|+..+.+. ...++|+|||.+|.||||++||++++.. .+ +++.+++..
T Consensus 186 V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~---~~~~PivVHCsaGvGRTGtfiai~~~~~~l~~~~~~~~~v~~~v~~ 262 (302)
T 4az1_A 186 FTQVQYTGWPDHGIPQSATSLEALLTNVKNS---PTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSA 262 (302)
T ss_dssp EEEEEECSSCTTSCCSCHHHHHHHHHHHHHS---CTTSCEEEESSSSSSHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHH
T ss_pred EEEEEeCCCCcCCccCCHHHHHHHHHHHHHh---CCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHH
Confidence 4444443 77887665777777777777543 2568999999999999999999986543 23 789999999
Q ss_pred HHhcCCCCCCCHHHHHHH
Q psy9353 157 FSMARPPGIYKQDYLNEL 174 (543)
Q Consensus 157 ~~~~R~~~i~~~~yi~~L 174 (543)
+++.|+..+.......-+
T Consensus 263 lR~qR~~~Vqt~~QY~Fi 280 (302)
T 4az1_A 263 MRRQRFGMVQRMEQYFVI 280 (302)
T ss_dssp HHHHSTTCSCSHHHHHHH
T ss_pred HHhcCcccCCCHHHHHHH
Confidence 999999999987644443
No 66
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.91 E-value=5e-09 Score=106.56 Aligned_cols=88 Identities=16% Similarity=0.280 Sum_probs=67.8
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHH----HHHh----CCCCHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISY----LVEE----MNFDVSAAIF 155 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~y----Li~~----~~~s~~~Al~ 155 (543)
|.++++. ++|||.|++.+.+..|+..+..... ...++|+|||.+|.||||+++|++ ++.. ..+++.+++.
T Consensus 191 V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGRTGtfiaid~~~~~ll~~~~~~~vdv~~~v~ 269 (303)
T 2oc3_A 191 VYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQG-SGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVL 269 (303)
T ss_dssp EEEEEECCCCSSSCCSCSHHHHHHHHHHHHHHC-SSCCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred EEEEEeccCCCCCCCCCHHHHHHHHHHHHHHhc-CCCCcEEEEECCCCcceeEEEeHHHHHHHHHhcccCCCcCHHHHHH
Confidence 4444443 7888766667778888887776532 345799999999999999999998 5543 2478999999
Q ss_pred HHHhcCCCCCCCHHHHHH
Q psy9353 156 AFSMARPPGIYKQDYLNE 173 (543)
Q Consensus 156 ~~~~~R~~~i~~~~yi~~ 173 (543)
.+++.|+..+.......-
T Consensus 270 ~lR~qR~~~Vqt~~Qy~f 287 (303)
T 2oc3_A 270 KMRKQRPAAVQTEEQYRF 287 (303)
T ss_dssp HHHTTSTTSSCSHHHHHH
T ss_pred HHHhhccccCCCHHHHHH
Confidence 999999999998764433
No 67
>3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus}
Probab=98.90 E-value=1.1e-09 Score=112.63 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=99.8
Q ss_pred CCCCCCeeeccccccccccccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCC--CcCCCCeEEE
Q psy9353 260 VGFPGSQPVSMDRNNIGYLAEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDP--NKRLTNTLLD 337 (543)
Q Consensus 260 ~~FPG~qPVsl~r~~l~~l~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~--~~~~~~tlLD 337 (543)
.+||--.-+-+-..-+.......|+|+||.||.+.-++.. +|+++.++|+|.+..-++-++|+..++ ...+++.+||
T Consensus 52 ~GyP~I~R~~~L~~~i~~~f~~~~~veEKLDG~NVRi~~~-dG~ilA~TRgG~icP~tT~r~~~~~~~~f~~~~P~l~Ld 130 (370)
T 3qwu_A 52 WGYPHIGRIFLLETGLREQFEAPFWVEEKVDGYNTRIFKY-GDNYYALSRGGFICPFTTDRLPDLIDLRILDENPDLVIC 130 (370)
T ss_dssp CCCCCCEEESCHHHHHHHHCSSCEEEEEECSSEEEEEEEE-TTEEEEECTTSCBCHHHHHHHHHHCCCHHHHHCTTEEEE
T ss_pred CCCCChhhhhchhhhhhhcCCCcEEEEEeeCCeEEEEEEE-CCEEEEEcCCCcccCcchhhhhhhcCchhhhcCCCeEEE
Confidence 4777766554333334333347999999999966666432 479999999997631111222222121 1334799999
Q ss_pred EEEEEecc--------CCccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccc
Q psy9353 338 GEMVIDRV--------QGQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDF 409 (543)
Q Consensus 338 GElV~d~~--------~~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~ 409 (543)
|||+.... ..+....|+|||+... ....-+|+.+|++++++.-+ |.. |+. ..-..
T Consensus 131 GEl~g~~npy~~~s~~y~~~~i~F~VFDV~d~--~~~~~L~~~eR~~ll~~~~l-p~V-------------~ii-~~~~~ 193 (370)
T 3qwu_A 131 AEVAGPENPYIEESPPYVKEDVQLFVFDFMKK--NEQGFLSQEEKMELIEKYNL-PHV-------------EIL-GRFTA 193 (370)
T ss_dssp EEEECTTCSSCSCCCTTCCSSCEEEEEEEEET--TCCSCCCHHHHHHHHHHHTC-CBC-------------CEE-EEECS
T ss_pred EEEEcCCCCccccCCcccccCceEEEEeCccc--cCCCcCCHHHHHHHHHHCCC-CCc-------------cEE-EEeCC
Confidence 99998531 1234679999999863 34566899999999887432 211 111 11111
Q ss_pred c--chhhHhhhhccccccccCCceEEEeeCC-----CCcccCC
Q psy9353 410 W--SVDKAGYLLSDKFTLCHEPDGLIFQPVD-----EPYVMGK 445 (543)
Q Consensus 410 ~--~~~~~~~ll~~~~~~~h~~DGLIf~~~~-----spY~~G~ 445 (543)
- ....+.++++ .+ ...+.||+|++..+ .+|++++
T Consensus 194 ~~~~~~~l~~~l~-~l-~~~g~EGVVlK~~~~~~~~~KY~t~~ 234 (370)
T 3qwu_A 194 SEEGIKKIKEILK-RF-NEEGREGVVFKEDSERNKRAKYITSY 234 (370)
T ss_dssp SHHHHHHHHHHHH-HH-HHTTCCEEEEEESSSSCCEEEEECHH
T ss_pred CCCCHHHHHHHHH-HH-HhCCCcEEEEecCccCCCceeeecCC
Confidence 1 1222333333 11 35789999999987 4677664
No 68
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=98.89 E-value=4.1e-09 Score=106.31 Aligned_cols=89 Identities=13% Similarity=0.131 Sum_probs=67.2
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~ 158 (543)
+.++++. ++|||.|++...+..|+..+.+... ..+++|+|||.+|.||||+++|++++.. ..+++.+++..++
T Consensus 177 V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~-~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~lR 255 (286)
T 2ooq_A 177 LRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNP-PEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELR 255 (286)
T ss_dssp EEEEEECSCCTTCCCSCSHHHHHHHHHHHHHSC-TTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHhcC-CCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 4455544 7898766566777777777765421 2468999999999999999999986643 2468999999999
Q ss_pred hcCCCCCCCHHHHHHH
Q psy9353 159 MARPPGIYKQDYLNEL 174 (543)
Q Consensus 159 ~~R~~~i~~~~yi~~L 174 (543)
+.|+..+.......-+
T Consensus 256 ~qR~~~Vqt~~Qy~fi 271 (286)
T 2ooq_A 256 AQRVNLVQTEEQYVFV 271 (286)
T ss_dssp HHSTTSSCSHHHHHHH
T ss_pred hhCcccCCCHHHHHHH
Confidence 9999999987544443
No 69
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=98.88 E-value=6e-09 Score=106.48 Aligned_cols=86 Identities=19% Similarity=0.315 Sum_probs=66.3
Q ss_pred EEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHH----Hh-CCCCHHHHHHHHHh
Q psy9353 86 AYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLV----EE-MNFDVSAAIFAFSM 159 (543)
Q Consensus 86 ~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi----~~-~~~s~~~Al~~~~~ 159 (543)
.++++ .++|||.|++.+.+..|+..+... ...++|+|||.+|.||||++||++++ .. ..+++.+++..+++
T Consensus 207 ~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~---~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~ 283 (315)
T 1wch_A 207 SHLNFTAWPDHDTPSQPDDLLTFISYMRHI---HRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRL 283 (315)
T ss_dssp EEEEECSCCTTSCCSCHHHHHHHHHHHHHH---CCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred EEEEEeecCCCCCCCCHHHHHHHHHHHHhh---CCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34444 378987666678888888877653 34689999999999999999998864 22 25799999999999
Q ss_pred cCCCCCCCHHHHHHH
Q psy9353 160 ARPPGIYKQDYLNEL 174 (543)
Q Consensus 160 ~R~~~i~~~~yi~~L 174 (543)
.|+..+.......-+
T Consensus 284 qR~~~Vqt~~Qy~Fi 298 (315)
T 1wch_A 284 QRHGMVQTEDQYIFC 298 (315)
T ss_dssp TSTTCSCSHHHHHHH
T ss_pred hCcccCCCHHHHHHH
Confidence 999999987544433
No 70
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=98.88 E-value=5.8e-09 Score=106.13 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=67.2
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHh--hCCCCeEEEEcCCCCChhHHHHHHHHHH-----hCCCCHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFIS--KSPLEKIGVHCTHGFNRTGFLLISYLVE-----EMNFDVSAAIFA 156 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~--~~~~~~V~VHC~~G~~RTG~~ia~yLi~-----~~~~s~~~Al~~ 156 (543)
|.++++. ++|||.|++...+..|+..+.+... ....++|+|||.+|.||||++||++++- ...+++.+++..
T Consensus 193 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~ 272 (305)
T 2cjz_A 193 LKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQ 272 (305)
T ss_dssp EEEEEECCCCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHH
T ss_pred EEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 3344433 7898755566778888888776332 2356899999999999999999998652 235799999999
Q ss_pred HHhcCCCCCCCHHHHHH
Q psy9353 157 FSMARPPGIYKQDYLNE 173 (543)
Q Consensus 157 ~~~~R~~~i~~~~yi~~ 173 (543)
+++.|+..+.......-
T Consensus 273 lR~qR~~~Vqt~~QY~F 289 (305)
T 2cjz_A 273 LRQDRGGMIQTCEQYQF 289 (305)
T ss_dssp HHHHSTTSSCSHHHHHH
T ss_pred HHHhCcccCCCHHHHHH
Confidence 99999999998754333
No 71
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=98.88 E-value=9e-09 Score=105.41 Aligned_cols=88 Identities=18% Similarity=0.167 Sum_probs=67.7
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHH----HHHhC-CCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISY----LVEEM-NFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~y----Li~~~-~~s~~~Al~~~~ 158 (543)
|.++++ .++|||.|++.+.+..|+..+.+... ..+++|+|||.+|.||||++||+. +++.. .+++.+++..++
T Consensus 202 V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~~~~~v~~lR 280 (320)
T 2i75_A 202 LTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRA-GKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMR 280 (320)
T ss_dssp EEEEEECCCCSSSSCSCTHHHHHHHHHHHHHHT-TCCSCEEEECSSSSSHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred EEEeeecCCCCCCCCCchHHHHHHHHHHHHHhc-cCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 445554 47898766667788888888876533 346899999999999999999875 34443 468999999999
Q ss_pred hcCCCCCCCHHHHHH
Q psy9353 159 MARPPGIYKQDYLNE 173 (543)
Q Consensus 159 ~~R~~~i~~~~yi~~ 173 (543)
+.|+..+.......-
T Consensus 281 ~qR~~~Vqt~~Qy~f 295 (320)
T 2i75_A 281 DQRAMMIQTPSQYRF 295 (320)
T ss_dssp TTSTTCSCSHHHHHH
T ss_pred HhCcCCCCCHHHHHH
Confidence 999999998754443
No 72
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=98.88 E-value=3.1e-09 Score=108.28 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=64.6
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHHH-----hCCCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLVE-----EMNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi~-----~~~~s~~~Al~~~ 157 (543)
|.++++. ++|||.|++...+..|+..+.+..+. ..+++|+|||.+|.||||+++|++++. ...+++.+++..+
T Consensus 196 V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PIvVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~l 275 (309)
T 1zc0_A 196 VKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQL 275 (309)
T ss_dssp EEEEEECSCCTTSCCSCHHHHHHHHHHHHTSCCCCSSCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHH
T ss_pred EEEEEEecccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCcchhHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 3344443 68887555666677777766543221 246899999999999999999998653 2357999999999
Q ss_pred HhcCCCCCCCHHHH
Q psy9353 158 SMARPPGIYKQDYL 171 (543)
Q Consensus 158 ~~~R~~~i~~~~yi 171 (543)
++.|+..+......
T Consensus 276 R~qR~~~Vqt~~Qy 289 (309)
T 1zc0_A 276 RLDRGGMIQTAEQY 289 (309)
T ss_dssp HHHSTTCSCCHHHH
T ss_pred HhhCCCCCCCHHHH
Confidence 99999999987533
No 73
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=98.87 E-value=5.8e-09 Score=106.34 Aligned_cols=87 Identities=18% Similarity=0.220 Sum_probs=65.2
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHH----HHhCC----CCHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYL----VEEMN----FDVSAAIF 155 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yL----i~~~~----~s~~~Al~ 155 (543)
|.++++ .++|||.|++...+..|+..+..+. ...+++|+|||.+|.||||++||++. ++... +++.+++.
T Consensus 185 V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~~~~l~~~~~~~~~dv~~~v~ 263 (309)
T 2p6x_A 185 IYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ-EDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIR 263 (309)
T ss_dssp EEEEEECCCCCTTCGGGGHHHHHHHHHHHHHC-CSCSSCEEEECSSSSSHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHH
T ss_pred EEEEeeeccccCCCCCCHHHHHHHHHHHHHHh-ccCCCcEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCccCHHHHHH
Confidence 334443 3789875556777777877776643 23568999999999999999999863 44332 79999999
Q ss_pred HHHhcCCCCCCCHHHHH
Q psy9353 156 AFSMARPPGIYKQDYLN 172 (543)
Q Consensus 156 ~~~~~R~~~i~~~~yi~ 172 (543)
.+++.|+..+.......
T Consensus 264 ~lR~qR~~~Vqt~~Qy~ 280 (309)
T 2p6x_A 264 EMRTQRPSLVQTQEQYE 280 (309)
T ss_dssp HHHTTSTTSSCSHHHHH
T ss_pred HHHHhCccccCCHHHHH
Confidence 99999999999875433
No 74
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=98.87 E-value=6.9e-09 Score=106.02 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=67.1
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHH-H---hC-CCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLV-E---EM-NFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi-~---~~-~~s~~~Al~~~ 157 (543)
|.++++. ++|||.|++.+.+..|+..+.+.... ..+++|+|||.+|.||||++||++++ . .. .+++.+++..+
T Consensus 172 V~h~~y~~WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 251 (314)
T 1l8k_A 172 ISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNM 251 (314)
T ss_dssp EEEEEECCCCSSSCCSCSHHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHH
T ss_pred EEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4444443 68987665677777887777653221 24689999999999999999998643 2 22 47999999999
Q ss_pred HhcCCCCCCCHHHHHHHH
Q psy9353 158 SMARPPGIYKQDYLNELF 175 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~~L~ 175 (543)
++.|+..+.......-+|
T Consensus 252 R~qR~~~Vqt~~Qy~fiy 269 (314)
T 1l8k_A 252 RKYRMGLIQTPDQLRFSY 269 (314)
T ss_dssp TTTBTTCSCSHHHHHHHH
T ss_pred HHhccccCCCHHHHHHHH
Confidence 999999999876554443
No 75
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=98.84 E-value=6.8e-09 Score=105.48 Aligned_cols=87 Identities=15% Similarity=0.107 Sum_probs=66.7
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHH----h-CCCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVE----E-MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~----~-~~~s~~~Al~~~~ 158 (543)
|.++++ .++|||.|++...+..|+..+.+... ...++|+|||.+|.||||+++|++++- . ..+++.+++..++
T Consensus 190 V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR 268 (302)
T 1yfo_A 190 ITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNP-QYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIR 268 (302)
T ss_dssp EEEEEECCCCSSSCCSCSHHHHHHHHHHHHHSC-TTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHSSEECHHHHHHHHT
T ss_pred EEEEeecccCCCCcCCCHHHHHHHHHHHHHhcc-CCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 444444 37898766677778888888775422 346899999999999999999987542 2 2479999999999
Q ss_pred hcCCCCCCCHHHHH
Q psy9353 159 MARPPGIYKQDYLN 172 (543)
Q Consensus 159 ~~R~~~i~~~~yi~ 172 (543)
+.|+..+.......
T Consensus 269 ~qR~~~Vqt~~Qy~ 282 (302)
T 1yfo_A 269 AQRCQMVQTDMQYV 282 (302)
T ss_dssp TTSTTSSCSHHHHH
T ss_pred HhccccCCCHHHHH
Confidence 99999999875433
No 76
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=98.84 E-value=8.3e-09 Score=104.52 Aligned_cols=83 Identities=14% Similarity=0.265 Sum_probs=61.9
Q ss_pred EEEE-EecCCCCCCCh---HHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHH-HHHHh----CCCCHHHHHHHH
Q psy9353 87 YIKI-QCEGHKEAPNE---KQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLIS-YLVEE----MNFDVSAAIFAF 157 (543)
Q Consensus 87 y~~i-p~~dhg~~P~~---e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~-yLi~~----~~~s~~~Al~~~ 157 (543)
|+++ .++||| +|+. +.+..|++.+.+... ..+++|+|||.+|.||||+++|+ +|++. ..+++.+++..+
T Consensus 181 h~~y~~WPD~g-vP~~~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGRTGtfiaid~ll~~l~~~~~vdv~~~v~~l 258 (295)
T 2gjt_A 181 HFNYTAWPDHG-VPTANAAESILQFVHMVRQQAT-KSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEM 258 (295)
T ss_dssp EEEECCCCCSS-SCCHHHHHHHHHHHHHHHHHHH-HCCSCEEEESSSSSHHHHHHHHHHHHHHHHHHCSEECHHHHHHHH
T ss_pred EEeecCCCCCC-CCCcccHHHHHHHHHHHHHhhc-cCCCcEEEEECCCCccchHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4443 478986 6663 456666666655433 24689999999999999999988 56654 246899999999
Q ss_pred HhcCCCCCCCHHHH
Q psy9353 158 SMARPPGIYKQDYL 171 (543)
Q Consensus 158 ~~~R~~~i~~~~yi 171 (543)
++.|+..+......
T Consensus 259 R~qR~~~Vqt~~Qy 272 (295)
T 2gjt_A 259 RSYRMSMVQTEEQY 272 (295)
T ss_dssp HTTSTTSSCSHHHH
T ss_pred HhhccccCCCHHHH
Confidence 99999999986533
No 77
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=98.83 E-value=7.2e-09 Score=105.51 Aligned_cols=87 Identities=17% Similarity=0.210 Sum_probs=65.0
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHH----hC-CCC--HHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVE----EM-NFD--VSAAIFA 156 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~----~~-~~s--~~~Al~~ 156 (543)
+.|+++ .++|||.|++...+..|+..+.+. ..+++|+|||.+|.||||++||++++. .. ..+ +.+++..
T Consensus 189 V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~~d~~v~~~v~~ 265 (306)
T 3m4u_A 189 VLQVQYVGWPDHGVPESAASFDELLSVIKNC---VTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAA 265 (306)
T ss_dssp EEEEEECSCCTTSCCSCHHHHHHHHHHHHTC---CCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHhh---CCCCCEEEEcCCCCcchheeehHHHHHHHHHcCCCcchHHHHHHHH
Confidence 444444 478887665777777777766542 346899999999999999999988663 22 346 8899999
Q ss_pred HHhcCCCCCCCHHHHHHH
Q psy9353 157 FSMARPPGIYKQDYLNEL 174 (543)
Q Consensus 157 ~~~~R~~~i~~~~yi~~L 174 (543)
+++.|+..|.......-+
T Consensus 266 lR~qR~~~Vqt~~Qy~fi 283 (306)
T 3m4u_A 266 MKQKRFGMVQRLEQYAVI 283 (306)
T ss_dssp HHHHSTTSSCSHHHHHHH
T ss_pred HHhcCccccCCHHHHHHH
Confidence 999999999987544443
No 78
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=98.83 E-value=9.6e-09 Score=106.14 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=70.1
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhC-CCCeEEEEcCCCCChhHHHHHHHHHH-----hCCCCHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKS-PLEKIGVHCTHGFNRTGFLLISYLVE-----EMNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~-~~~~V~VHC~~G~~RTG~~ia~yLi~-----~~~~s~~~Al~~~ 157 (543)
+.++++ .++|||.|++...+..|+..+.++..+. ++++|+|||.+|.||||++||..++- ...+++.+++..+
T Consensus 200 V~h~~y~~WPD~gvP~~~~~ll~f~~~v~~~~~~~~~~~PiVVHCSAGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~l 279 (342)
T 3i36_A 200 LRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDL 279 (342)
T ss_dssp EEEEEECCSCSSSSCSCSHHHHHHHHHHHHHHTTSCSSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHH
T ss_pred EEEEeecCcCcCCCCCCHHHHHHHHHHHHHHHHhCCCCCCEEEEcCCCChHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 344444 3679986667788889999998877653 46899999999999999999987552 2357999999999
Q ss_pred HhcCCCCCCCHHHHHH
Q psy9353 158 SMARPPGIYKQDYLNE 173 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~~ 173 (543)
++.|+..+...+...-
T Consensus 280 R~qR~~mVqt~~QY~F 295 (342)
T 3i36_A 280 RMHRPLMVQTEDQYVF 295 (342)
T ss_dssp HTTSTTSSCSHHHHHH
T ss_pred HHhCccccCCHHHHHH
Confidence 9999999998754443
No 79
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=98.83 E-value=8.1e-09 Score=104.89 Aligned_cols=87 Identities=18% Similarity=0.261 Sum_probs=65.7
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHH-H---h--CCCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLV-E---E--MNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi-~---~--~~~s~~~Al~~~ 157 (543)
+.++++. ++|||.|++...+..|+..+.+... ...++|+|||.+|.||||+++|++++ . . ..+++.+++..+
T Consensus 189 V~h~~y~~WPD~gvP~~~~~ll~~~~~v~~~~~-~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~vdv~~~v~~l 267 (301)
T 2i1y_A 189 LTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYR-GRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHV 267 (301)
T ss_dssp EEEEEECCCCSSSBCSCSHHHHHHHHHHHHSCC-CSSCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHH
T ss_pred EEEEeeccCCCCCCCCCHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCchhHHHHHHHHHHHHHHhcCCCcCHHHHHHHH
Confidence 3344433 7898766677778888877765322 24579999999999999999999754 2 2 147999999999
Q ss_pred HhcCCCCCCCHHHHH
Q psy9353 158 SMARPPGIYKQDYLN 172 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~ 172 (543)
++.|+..+.......
T Consensus 268 R~qR~~~Vqt~~QY~ 282 (301)
T 2i1y_A 268 RDQRPGLVRSKDQFE 282 (301)
T ss_dssp HTTSTTCSCSHHHHH
T ss_pred HHhCccccCCHHHHH
Confidence 999999999875433
No 80
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=98.81 E-value=1.1e-08 Score=93.89 Aligned_cols=111 Identities=15% Similarity=0.222 Sum_probs=83.0
Q ss_pred cccceEEecccccccCCC----hhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChh
Q psy9353 59 RLKIGLWIDLTKTSRFYD----KSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRT 134 (543)
Q Consensus 59 ~~~i~~VIdLt~~~~~y~----~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RT 134 (543)
..++..||+++...+.-. .+.+++.|++++.+|+ |. ..|+.+++.++++.+.+ .. +..|+|||.+| .|+
T Consensus 38 ~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~-Dv-~~~~~~~v~~~~~~i~~---~~-G~dVLVnnAgg-~r~ 110 (157)
T 3gxh_A 38 QAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV-DW-QNPKVEDVEAFFAAMDQ---HK-GKDVLVHCLAN-YRA 110 (157)
T ss_dssp HTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC-CT-TSCCHHHHHHHHHHHHH---TT-TSCEEEECSBS-HHH
T ss_pred HcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecC-CC-CCCCHHHHHHHHHHHHh---cC-CCCEEEECCCC-CCH
Confidence 478999999886543211 2346668999999999 43 57777899988887754 22 34899999977 599
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCC-H---HHHHHHHHHhC
Q psy9353 135 GFLLISYLVEEMNFDVSAAIFAFSMARPPGIYK-Q---DYLNELFRRYD 179 (543)
Q Consensus 135 G~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~-~---~yi~~L~~~y~ 179 (543)
|.++++||+. .|+++++| +.++..|| ...+ + .++++....|+
T Consensus 111 ~~l~~~~~~~-~G~~~~~A-~~v~~~rp-i~~~~~~w~~~~~~~~~~~~ 156 (157)
T 3gxh_A 111 SAFAYLYQLK-QGQNPNMA-QTMTPWND-ELAIYPKWQALLTEVSAKYG 156 (157)
T ss_dssp HHHHHHHHHH-TTCCCCHH-HHTGGGTT-CGGGCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-cCCCHHHH-HHHHhhCc-ccCCcHHHHHHHHHHHHhhc
Confidence 9999999976 69999999 99999999 3333 3 45556555554
No 81
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=98.78 E-value=1.8e-08 Score=103.26 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=64.4
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~ 158 (543)
+.++++ .++|||.|++...+..|+..+... .....++|+|||.+|.||||++||++++.. ..+++.+++..++
T Consensus 211 V~h~~y~~WPD~gvP~~~~~~l~~i~~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR 289 (320)
T 2h4v_A 211 VIQYHYTQWPDMGVPEYALPVLTFVRRSSAA-RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIR 289 (320)
T ss_dssp EEEEEECCCCSSSSCSCSHHHHHHHHHHHHT-CCTTCCCEEEESSSSSHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHT
T ss_pred EEEEEeCCCCcCCCCCCHHHHHHHHHHHHhh-ccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 334433 478987555655566666655432 122468999999999999999999986642 3479999999999
Q ss_pred hcCCCCCCCHHHHHHH
Q psy9353 159 MARPPGIYKQDYLNEL 174 (543)
Q Consensus 159 ~~R~~~i~~~~yi~~L 174 (543)
+.|+..+.......-+
T Consensus 290 ~qR~~~Vqt~~QY~Fi 305 (320)
T 2h4v_A 290 TQRNYLVQTEEQYIFI 305 (320)
T ss_dssp TTSTTSSCSHHHHHHH
T ss_pred HhCcccCCcHHHHHHH
Confidence 9999999987544433
No 82
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=98.72 E-value=3.9e-08 Score=107.55 Aligned_cols=87 Identities=17% Similarity=0.230 Sum_probs=68.6
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHHHh----CC----CCHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLVEE----MN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi~~----~~----~s~~~Al 154 (543)
|.++++ .++|||.|++...+..|+..+....+. ...++|+|||.+|.||||++||++++.. .+ +++.+++
T Consensus 409 V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaG~GRTGtfia~d~~~~~l~~~~~~~~vdv~~~v 488 (532)
T 2b3o_A 409 IWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTI 488 (532)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHSCTTSCCCHHHHH
T ss_pred EEEecccCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCccCHHHHH
Confidence 444444 378987666778889999998876554 3468999999999999999999875532 34 7899999
Q ss_pred HHHHhcCCCCCCCHHHH
Q psy9353 155 FAFSMARPPGIYKQDYL 171 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~yi 171 (543)
..+++.|+..|......
T Consensus 489 ~~lR~qR~~~Vqt~~Qy 505 (532)
T 2b3o_A 489 QMVRAQRSGMVQTEAQY 505 (532)
T ss_dssp HHHTTTSTTSSCSHHHH
T ss_pred HHHHhhCcccCCCHHHH
Confidence 99999999999987533
No 83
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=98.71 E-value=3.2e-08 Score=100.69 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=63.7
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHHhcCCCCCC
Q psy9353 92 CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFSMARPPGIY 166 (543)
Q Consensus 92 ~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~~~R~~~i~ 166 (543)
++|||.|++...+..|+..+.+... ...++|+|||.+|.||||++||...+-. ...++.+++..+|+.|+..+.
T Consensus 208 WPD~gvP~~~~~ll~fi~~v~~~~~-~~~~PIvVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~mVq 286 (307)
T 3s3e_A 208 WPDFGVPNPPQTLVRFVRAFRDRIG-AEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQ 286 (307)
T ss_dssp CCSSSCCSSTHHHHHHHHHHHHHHC-SCCSCEEEECSSSSHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHHSTTSSC
T ss_pred cccCCCCCChHHHHHHHHHHHHHhc-CCCCCEEEEcCCCchHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhhCCCCcC
Confidence 6788766677788888887776543 2457899999999999999999885532 135899999999999999999
Q ss_pred CHHHHH
Q psy9353 167 KQDYLN 172 (543)
Q Consensus 167 ~~~yi~ 172 (543)
..+...
T Consensus 287 t~~QY~ 292 (307)
T 3s3e_A 287 TEQQYI 292 (307)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 875443
No 84
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.70 E-value=4.4e-08 Score=108.10 Aligned_cols=89 Identities=20% Similarity=0.241 Sum_probs=70.5
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAF 157 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~ 157 (543)
+.++++. ++|||.|++...+..|+..+.+...+ .++++|+|||.+|.||||+++|+.++-. ..+++.+++..+
T Consensus 463 V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 542 (575)
T 1lar_A 463 IRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTL 542 (575)
T ss_dssp EEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4455544 78998777778888999888876544 3568999999999999999999986632 246999999999
Q ss_pred HhcCCCCCCCHHHHHH
Q psy9353 158 SMARPPGIYKQDYLNE 173 (543)
Q Consensus 158 ~~~R~~~i~~~~yi~~ 173 (543)
++.|+..+.......-
T Consensus 543 R~qR~~~Vqt~~Qy~f 558 (575)
T 1lar_A 543 RTQRPAMVQTEDQYQL 558 (575)
T ss_dssp TTTSTTSSCSHHHHHH
T ss_pred HhhCchhcCCHHHHHH
Confidence 9999999998754433
No 85
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.69 E-value=4e-08 Score=108.90 Aligned_cols=88 Identities=19% Similarity=0.206 Sum_probs=70.4
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh----C-CCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE----M-NFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~----~-~~s~~~Al~~~~ 158 (543)
+.++++ .++|||.|++...+..|+..+.+..+...+++|+|||.+|.||||++||++++-. . .+++.+++..++
T Consensus 482 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR 561 (599)
T 2jjd_A 482 VRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLR 561 (599)
T ss_dssp EEEEEECCSCSSSCCSCCHHHHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCChHHHHHHHHHHHHHHhccCCCcEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 344444 4789987777788889999888876656678999999999999999999875532 2 369999999999
Q ss_pred hcCCCCCCCHHHHH
Q psy9353 159 MARPPGIYKQDYLN 172 (543)
Q Consensus 159 ~~R~~~i~~~~yi~ 172 (543)
+.|+..+.......
T Consensus 562 ~qR~~mVqt~~QY~ 575 (599)
T 2jjd_A 562 LQRPHMVQTLEQYE 575 (599)
T ss_dssp TTSTTSSCSHHHHH
T ss_pred hhCccccCCHHHHH
Confidence 99999999875333
No 86
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=98.69 E-value=4.5e-08 Score=101.59 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=61.8
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHH----HHh----CCCCHHHHHHHHHhcCC
Q psy9353 92 CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYL----VEE----MNFDVSAAIFAFSMARP 162 (543)
Q Consensus 92 ~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yL----i~~----~~~s~~~Al~~~~~~R~ 162 (543)
++|||.+++...+..|+..+.+.... ...++|+|||.+|.||||++||+.+ +.+ ..+++.+++..+++.|+
T Consensus 213 WPD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR~ 292 (354)
T 4i8n_A 213 WPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRM 292 (354)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHTTST
T ss_pred cccCCccCCHHHHHHHHHHHHHHhhccCCCCCEEEEeCCCcchHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhCc
Confidence 67887666777777888777654322 2457999999999999999998763 221 25799999999999999
Q ss_pred CCCCCHHHH
Q psy9353 163 PGIYKQDYL 171 (543)
Q Consensus 163 ~~i~~~~yi 171 (543)
..|......
T Consensus 293 ~mVqt~~QY 301 (354)
T 4i8n_A 293 GLIQTADQL 301 (354)
T ss_dssp TCSCSHHHH
T ss_pred ccccCHHHH
Confidence 999987543
No 87
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=98.68 E-value=6.7e-08 Score=98.69 Aligned_cols=81 Identities=19% Similarity=0.210 Sum_probs=64.4
Q ss_pred EecCCCCCCChHHHHHHHHHHHHHHh------------hCCCCeEEEEcCCCCChhHHHHHHHHH----H-hCCCCHHHH
Q psy9353 91 QCEGHKEAPNEKQTRVFINLCSKFIS------------KSPLEKIGVHCTHGFNRTGFLLISYLV----E-EMNFDVSAA 153 (543)
Q Consensus 91 p~~dhg~~P~~e~i~~f~~~v~~fl~------------~~~~~~V~VHC~~G~~RTG~~ia~yLi----~-~~~~s~~~A 153 (543)
.++|||.|++...+..|+..+.+... ..+.++|+|||.+|.||||++||...+ . ....++.++
T Consensus 192 ~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCSaGvGRTGtfiaid~~l~~l~~~~~vdv~~~ 271 (314)
T 4ge6_A 192 SWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQT 271 (314)
T ss_dssp CSCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSCBCHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 37899877788888899988876542 124579999999999999999997633 2 235699999
Q ss_pred HHHHHhcCCCCCCCHHHH
Q psy9353 154 IFAFSMARPPGIYKQDYL 171 (543)
Q Consensus 154 l~~~~~~R~~~i~~~~yi 171 (543)
+..+|+.|+..+.+.+..
T Consensus 272 V~~lR~qR~~mVqt~~QY 289 (314)
T 4ge6_A 272 VSRMRTQRAFSIQTPEQY 289 (314)
T ss_dssp HHHHTTTSTTCSCSHHHH
T ss_pred HHHHHhhcccccCCHHHH
Confidence 999999999999987543
No 88
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.66 E-value=4.6e-08 Score=108.69 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=69.7
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh---------CCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCC
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK---------SPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFD 149 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~---------~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s 149 (543)
|.++++. ++|||.|++...+..|+..+.+.... ...++|+|||.+|.||||+++|++++-. ..++
T Consensus 494 V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~ai~~~l~~~~~~~~vd 573 (610)
T 1ygr_A 494 VYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVD 573 (610)
T ss_dssp EEEEEECSCCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTHHHHHHHHHHHHHHHHSSBCC
T ss_pred EEEeeeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcchhHHHHHHHHHHHHhhCCccC
Confidence 4555554 78998666777788888777654321 2458999999999999999999985532 2479
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHH
Q psy9353 150 VSAAIFAFSMARPPGIYKQDYLNELFR 176 (543)
Q Consensus 150 ~~~Al~~~~~~R~~~i~~~~yi~~L~~ 176 (543)
+.+++..+++.|+..+.......-+|+
T Consensus 574 v~~~V~~lR~qR~~~Vqt~~QY~F~y~ 600 (610)
T 1ygr_A 574 IFQVVKALRKARLGMVSTFEQYQFLYD 600 (610)
T ss_dssp HHHHHHHHHHHSTTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCccccCCHHHHHHHHH
Confidence 999999999999999999765554443
No 89
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=98.66 E-value=7.1e-08 Score=98.12 Aligned_cols=92 Identities=13% Similarity=0.209 Sum_probs=64.7
Q ss_pred cEEEEE-EecCCCCCCC---hHHHHHHHHHHHHHH----hh--------CCCCeEEEEcCCCCChhHHHHHHHHHHhC--
Q psy9353 85 IAYIKI-QCEGHKEAPN---EKQTRVFINLCSKFI----SK--------SPLEKIGVHCTHGFNRTGFLLISYLVEEM-- 146 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~---~e~i~~f~~~v~~fl----~~--------~~~~~V~VHC~~G~~RTG~~ia~yLi~~~-- 146 (543)
+.++++ .++||| +|+ ...+..|++.+.+.. .+ ....+++|||.+|.||||++||+.++...
T Consensus 184 V~h~~y~~WPD~g-vP~~~~~~~ll~~l~~v~~~~~~~~~~~~~~~~~~~~~~piVVHCSAGvGRTGtfiaid~ll~~~~ 262 (306)
T 1lyv_A 184 VPVVHVGNWPDQT-AVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRN 262 (306)
T ss_dssp EEEEEECCCCTTC-CCCHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGGCTTSSCCEEECSSSSSHHHHHHHHHHHTCGGG
T ss_pred EEEEEECCCCccC-cCChhHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCcEEEcCCCCchhHHHHHHHHHHHhhc
Confidence 334443 378986 554 345566666655421 11 12356899999999999999999866443
Q ss_pred -CCCHHHHHHHHHhcCCC-CCCCHHHHHHHHHH
Q psy9353 147 -NFDVSAAIFAFSMARPP-GIYKQDYLNELFRR 177 (543)
Q Consensus 147 -~~s~~~Al~~~~~~R~~-~i~~~~yi~~L~~~ 177 (543)
.+++.+++..+++.|+. .+...+....+|+.
T Consensus 263 ~~vdv~~~V~~lR~qR~~~mVQt~~QY~fiy~~ 295 (306)
T 1lyv_A 263 SQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKL 295 (306)
T ss_dssp TTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCcCcCCCHHHHHHHHHH
Confidence 67999999999999999 89988655555443
No 90
>1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens}
Probab=98.65 E-value=4.5e-07 Score=85.78 Aligned_cols=156 Identities=15% Similarity=0.129 Sum_probs=110.6
Q ss_pred CCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCCC----c-CCCCeEEEEEEEEeccCCccccEEEE
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPN----K-RLTNTLLDGEMVIDRVQGQNIPRYLV 355 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~~----~-~~~~tlLDGElV~d~~~~~~~~~yli 355 (543)
++|++-+-.-|.|+|+... .|.+-..+|+|... .+|++.-..+ . ....||||+....+ .-+|+|
T Consensus 21 ~~Wl~vp~P~GkRcLvva~-~G~T~~~~k~G~~~----~~F~S~LPgG~~~~~~~~~~tILDCI~~e~------~~tyYV 89 (204)
T 1xk5_A 21 QEWIVVVCPVGKRALIVAS-RGSTSAYTKSGYCV----NRFSSLLPGGNRRNSTAKDYTILDCIYNEV------NQTYYV 89 (204)
T ss_dssp HHEEEEEEESSEEEEEEEE-TTEEEEECTTSCEE----EEECCSSSSSCSSSCCTTCCEEEEEEEEGG------GTEEEE
T ss_pred CCeEEEECCCCcEEEEEec-CCeEEEECCCCcEE----EEEcccCCCCCcccCCCCCCEEEEEEEecC------CcEEEE
Confidence 4888889999999999885 58899999999754 2455332111 1 23569999988733 248999
Q ss_pred EEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccchh--hHhhhhccccccccCCceEE
Q psy9353 356 YDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVD--KAGYLLSDKFTLCHEPDGLI 433 (543)
Q Consensus 356 fDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~--~~~~ll~~~~~~~h~~DGLI 433 (543)
.|+|+++|.++.+....-|.-.|+.-+.+.- .+.+ ....+++.+..-++++.+ ++++++... .....|||+
T Consensus 90 LDvl~W~g~~l~dcetefRffWl~skl~E~~--~l~~---~s~~n~~~f~~lp~~~c~~~~l~~~~~~~--~~~~~DGlL 162 (204)
T 1xk5_A 90 LDVMCWRGHPFYDCQTDFRFYWMHSKLPEEE--GLGE---KTKLNPFKFVGLKNFPCTPESLCDVLSMD--FPFEVDGLL 162 (204)
T ss_dssp EEEEEETTEECTTSCHHHHHHHHHHHTTTST--TTTS---CBTTBSSEEEECCEEECSHHHHHHHHTCC--CSSCEEEEE
T ss_pred EEEEEECCceeecCcHHHHHHHHHHHhcccc--cccc---ccccCCcceEecccccCCHHHHHHHHccC--CCCCcceEE
Confidence 9999999999999999999999987664311 0100 124456666666766654 344444422 568999999
Q ss_pred EeeCCCCcccCCCcceEEecC
Q psy9353 434 FQPVDEPYVMGKAVDTLKWKP 454 (543)
Q Consensus 434 f~~~~spY~~G~~~~~lKWKp 454 (543)
|-..++-|.+|+.+-+.=+||
T Consensus 163 FyHK~a~Y~~G~TPLv~WLkp 183 (204)
T 1xk5_A 163 FYHKQTHYSPGSTPLVGWLRP 183 (204)
T ss_dssp EEESSCCCCSEEEEEEEEECG
T ss_pred EEeccccccCCCCChhhhcch
Confidence 999999999998765432355
No 91
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=98.65 E-value=7.7e-08 Score=105.01 Aligned_cols=91 Identities=15% Similarity=0.243 Sum_probs=69.9
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhh-CCCCeEEEEcCCCCChhHHHHHHHHH----HhCC----CCHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISK-SPLEKIGVHCTHGFNRTGFLLISYLV----EEMN----FDVSAAI 154 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~-~~~~~V~VHC~~G~~RTG~~ia~yLi----~~~~----~s~~~Al 154 (543)
|.++++. ++|||.|++...+..|+..+.+..+. ...++|+|||.+|.||||++||+.++ ...+ +++.+++
T Consensus 415 V~h~~y~~WPD~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v 494 (525)
T 2shp_A 415 VWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTI 494 (525)
T ss_dssp EEEEEECCCCSSSCCSCHHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHH
T ss_pred EEEEEecCCCCCCcccChHHHHHHHHHHHHHHhccCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHHcCCCCcCCHHHHH
Confidence 3444443 67988666788889999988876554 24689999999999999999998754 2224 6899999
Q ss_pred HHHHhcCCCCCCCHHHHHHHH
Q psy9353 155 FAFSMARPPGIYKQDYLNELF 175 (543)
Q Consensus 155 ~~~~~~R~~~i~~~~yi~~L~ 175 (543)
..+++.|+..|.......-+|
T Consensus 495 ~~lR~qR~~~Vqt~~QY~fiy 515 (525)
T 2shp_A 495 QMVRSQRSGMVQTEAQYRSIY 515 (525)
T ss_dssp HHHHTTSTTSSCCHHHHHHHH
T ss_pred HHHHHhCcccCCCHHHHHHHH
Confidence 999999999999976444433
No 92
>2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5}
Probab=98.64 E-value=2.4e-07 Score=96.98 Aligned_cols=159 Identities=16% Similarity=0.162 Sum_probs=97.0
Q ss_pred CCCCCCeee-ccccccccccccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCC--CCcCCCCeEE
Q psy9353 260 VGFPGSQPV-SMDRNNIGYLAEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKD--PNKRLTNTLL 336 (543)
Q Consensus 260 ~~FPG~qPV-sl~r~~l~~l~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~--~~~~~~~tlL 336 (543)
.+||--.|. |+++..-.......|+|+||+||.|+.++.. +|.+.+.+|++..-.++.-.||..-. +.......+|
T Consensus 73 ~~fpkv~~mlsL~~~~~~~~~~~~~vvEeKlDG~~v~l~y~-~G~v~a~TRg~g~e~iT~n~i~~wip~~L~~~~~~l~L 151 (389)
T 2vug_A 73 PGFPHIKRIINLRSGIRRIFKRGEFYVEEKVDGYNVRVVMY-KGKMLGITRGGFICPFTTERIPDFVPQEFFKDNPNLIL 151 (389)
T ss_dssp CCCCCCEEESSSHHHHHHHSSSCEEEEEEECCSEEEEEEEE-TTEEEEEETTSCBCHHHHHHGGGTSCTHHHHHCTTEEE
T ss_pred cCCCCcccccCchhhhhhhccCCeEEEEEeecCcEEEEEEE-CCEEEEEeCCCCCCCCchhhhhHhHHHHHhcCCCcEEE
Confidence 467765443 5544311111135799999999999988664 47889999999861122214454211 1111467999
Q ss_pred EEEEEEecc-----C---CccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEecc
Q psy9353 337 DGEMVIDRV-----Q---GQNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKD 408 (543)
Q Consensus 337 DGElV~d~~-----~---~~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~ 408 (543)
|||++.-.. + .+.++.|++||+...++.. ..|+.+|+++|++.-+.. .|. +....
T Consensus 152 ~GEvv~~~~~f~~~n~~np~r~l~F~vFDV~~~~~g~--~~s~~er~~~L~~lG~~~--------------vp~-~~~~~ 214 (389)
T 2vug_A 152 VGEMAGPESPYLVEGPPYVKEDIQFFLFDVQEIKTGR--SLPVEERLKIAEEYGINH--------------VEV-FGKYT 214 (389)
T ss_dssp EEEEESSSCSSCSCCCTTCCSSCEEEEEEEEETTTCC--BCCHHHHHHHHHHHTCCB--------------CCE-EEEEE
T ss_pred EEEEEecCChHHHhcccCcccCCEEEEEEeeccCCCC--cCCHHHHHHHHHHcCCCC--------------CCe-EEEEc
Confidence 999987431 1 2456799999998776332 278999999999753210 111 11111
Q ss_pred ccchhhHhhhhccccccccCCceEEEeeCC
Q psy9353 409 FWSVDKAGYLLSDKFTLCHEPDGLIFQPVD 438 (543)
Q Consensus 409 ~~~~~~~~~ll~~~~~~~h~~DGLIf~~~~ 438 (543)
......+.++++ .+ ..++.||||++..+
T Consensus 215 ~~~~eel~~~i~-~~-~~~~~EGvViK~~d 242 (389)
T 2vug_A 215 KDDVDELYQLIE-RL-SKEGREGIIMKSPD 242 (389)
T ss_dssp GGGHHHHHHHHH-HH-HHTTCCEEEEECTT
T ss_pred CCCHHHHHHHHH-Hh-cCCCCCeEEEEECC
Confidence 112334445554 12 47899999999997
No 93
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=98.60 E-value=1.1e-07 Score=105.39 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=67.0
Q ss_pred EEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhC-CCCeEEEEcCCCCChhHHHHHHHHH----HhCC----CCHHHHHH
Q psy9353 86 AYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKS-PLEKIGVHCTHGFNRTGFLLISYLV----EEMN----FDVSAAIF 155 (543)
Q Consensus 86 ~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~-~~~~V~VHC~~G~~RTG~~ia~yLi----~~~~----~s~~~Al~ 155 (543)
.++++. ++|||.|++...+..|+..+....+.. ..++|+|||.+|.||||++||+..+ ...+ +++.+++.
T Consensus 410 ~h~~y~~WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~ 489 (595)
T 3ps5_A 410 WHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQ 489 (595)
T ss_dssp EEEEECCCCSSSSCSCSHHHHHHHHHHHHHHHHCTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCSSCEECHHHHHH
T ss_pred EEEEECCcccCCccCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCchHHHHHHHHHHHHHHHhcCCCCccCHHHHHH
Confidence 344433 779986667788999999988776543 4589999999999999999998744 2224 68999999
Q ss_pred HHHhcCCCCCCCHH
Q psy9353 156 AFSMARPPGIYKQD 169 (543)
Q Consensus 156 ~~~~~R~~~i~~~~ 169 (543)
.+++.|+..|....
T Consensus 490 ~lR~qR~~mVqt~~ 503 (595)
T 3ps5_A 490 MVRAQRSGMVQTEA 503 (595)
T ss_dssp HHHTTSTTSSCSHH
T ss_pred HHHhhcccccCCHH
Confidence 99999999999864
No 94
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=98.60 E-value=4.9e-08 Score=98.84 Aligned_cols=56 Identities=16% Similarity=0.250 Sum_probs=43.1
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCCHHHHHHHHHHhC
Q psy9353 120 LEKIGVHCTHGFNRTGFLLISYLVEEMNFDVSAAIFAFSMARPPGIYKQDYLNELFRRYD 179 (543)
Q Consensus 120 ~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s~~~Al~~~~~~R~~~i~~~~yi~~L~~~y~ 179 (543)
+.+|+|||++|++|||+++|++|.. .||+.+++++-+...... ...+...+.....
T Consensus 173 ~~pvl~HC~aGkDRTG~~~alll~~-~g~~~~~I~~DY~~Tn~~---~~~~~~~~~~~~~ 228 (296)
T 1ywf_A 173 GRPVLTHCFAGKDRTGFVVALVLEA-VGLDRDVIVADYLRSNDS---VPQLRARISEMIQ 228 (296)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHH-TTCCHHHHHHHHHGGGGG---HHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCccccHHHHHHHHH-cCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 6899999999999999999999987 599999999988765531 2334444444433
No 95
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.58 E-value=1.8e-07 Score=103.27 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=66.1
Q ss_pred cEEEEEE-ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy9353 85 IAYIKIQ-CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~ip-~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~ 158 (543)
+.++++. ++|||.|++...+..|+..+.... ....++|+|||.+|.||||++||+.++.. ..+++.+++..++
T Consensus 174 V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~~-~~~~~pivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~i~~~v~~lR 252 (575)
T 1lar_A 174 LRQFQFMAWPDHGVPEYPTPILAFLRRVKACN-PLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMR 252 (575)
T ss_dssp EEEEEECCSCSSSCCSCSHHHHHHHHHHHHHS-CTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred EEEEEeCCCCCCCcccCHHHHHHHHHHHHHhc-CCCCCCEEEEecCCCcceeEEEEhHHHHHHHhccCCCCHHHHHHHHH
Confidence 4455553 789987667788888888876542 22458999999999999999999875532 3579999999999
Q ss_pred hcCCCCCCCHH
Q psy9353 159 MARPPGIYKQD 169 (543)
Q Consensus 159 ~~R~~~i~~~~ 169 (543)
+.|+..+....
T Consensus 253 ~qR~~~Vqt~~ 263 (575)
T 1lar_A 253 SQRNYMVQTED 263 (575)
T ss_dssp TTSTTSSCSHH
T ss_pred hhhhccCCCHH
Confidence 99999999875
No 96
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.58 E-value=1.5e-07 Score=104.35 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=63.0
Q ss_pred EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHH-----HhCCCCHHHHHHHHHhcCCCCC
Q psy9353 91 QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLV-----EEMNFDVSAAIFAFSMARPPGI 165 (543)
Q Consensus 91 p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi-----~~~~~s~~~Al~~~~~~R~~~i 165 (543)
.++|||.|++...+..|+..+.... ....++|+|||.+|.||||++||...+ ....+++.+++..+++.|+..+
T Consensus 195 ~WpD~gvP~~~~~~l~~~~~v~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~V 273 (599)
T 2jjd_A 195 SWPDFGVPFTPIGMLKFLKKVKTLN-PVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQMV 273 (599)
T ss_dssp CCCSSSCCSCSHHHHHHHHHHHHHS-CTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTCS
T ss_pred CCCCCCCCCChHHHHHHHHHHHhhc-cCCCceEEEEeCCCCcccchhhHHHHHHHHHhccCCcCHHHHHHHHHHhhhccc
Confidence 3789886667788888888887642 224589999999999999999986432 3346799999999999999999
Q ss_pred CCHHH
Q psy9353 166 YKQDY 170 (543)
Q Consensus 166 ~~~~y 170 (543)
.....
T Consensus 274 qt~~Q 278 (599)
T 2jjd_A 274 QTDMQ 278 (599)
T ss_dssp CCHHH
T ss_pred cchHH
Confidence 98753
No 97
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.51 E-value=1.7e-07 Score=104.04 Aligned_cols=84 Identities=17% Similarity=0.107 Sum_probs=63.0
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~ 158 (543)
|.++++ .++|||.|++...+..|+..+..+. ....++|+|||.+|.||||++||+.++.. ..+++.+++..++
T Consensus 188 V~h~~y~~WPD~gvP~~~~~~l~~~~~v~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR 266 (610)
T 1ygr_A 188 VTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFS-NFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEAENKVDVYGYVVKLR 266 (610)
T ss_dssp EEEEEECSCCTTSCCSCHHHHHHHHHHHTTSC-CTTCCCEEEECSSSSHHHHHHHHHHHHHHTHHHHSEECHHHHHHHHH
T ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHHHhh-ccCCCCeEEEcCCCCCchhhHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 334444 3789876666666666666554321 12468999999999999999999986632 3579999999999
Q ss_pred hcCCCCCCCHH
Q psy9353 159 MARPPGIYKQD 169 (543)
Q Consensus 159 ~~R~~~i~~~~ 169 (543)
+.|+..|....
T Consensus 267 ~qR~~~Vqt~~ 277 (610)
T 1ygr_A 267 RQRCLMVQVEA 277 (610)
T ss_dssp TTSTTSSCCHH
T ss_pred hhhcCCcCcHH
Confidence 99999999864
No 98
>3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B
Probab=98.44 E-value=4.5e-06 Score=84.46 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=109.0
Q ss_pred CCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCCCCCc-----CCCCeEEEEEEEEeccCCccccEEEE
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRKDPNK-----RLTNTLLDGEMVIDRVQGQNIPRYLV 355 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~~~~~-----~~~~tlLDGElV~d~~~~~~~~~yli 355 (543)
.+|+|-.=.-|.|||+... .|.+..++|+|..+ .+||+.-..+. .-..||||+.+.-. .-+|+|
T Consensus 122 ~~W~~vpcPvGkRcLVVas-~G~T~aysk~G~~l----~~F~S~LPGG~~~~s~~~~~TILDCIy~e~------~~tyYV 190 (365)
T 3gjx_B 122 QEWIVVVCPVGKRALIVAS-RGSTSAYTKSGYCV----NRFSSLLPGGNRRNSTAKDYTILDCIYNEV------NQTYYV 190 (365)
T ss_dssp HHEEEEEEESSEEEEEEEE-TTEEEEECTTCCEE----EEECCSSTTTCC----CCCCEEEEEEEETT------TTEEEE
T ss_pred cCeeEEeccCCcEEEEEec-CceEEEECCCCCEE----eeeCCCCCCCCccccCCCCCEEEEEEeecC------CceEEE
Confidence 4788888888999998885 68899999999755 24554321100 23579999987632 248999
Q ss_pred EEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCCCeEEEeccccchh--hHhhhhccccccccCCceEE
Q psy9353 356 YDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAEPFSVRVKDFWSVD--KAGYLLSDKFTLCHEPDGLI 433 (543)
Q Consensus 356 fDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~pf~i~~k~~~~~~--~~~~ll~~~~~~~h~~DGLI 433 (543)
.|+|+++|.++.++...-|.-.|+.-+.+.. .+. .....+||.+..-+.++.+ .+.+++.. ..+++.|||+
T Consensus 191 LDVL~W~g~~l~dCeteFRffWl~SKL~E~~--~l~---e~s~~np~~Fv~lp~~~C~~esL~~~ls~--~~pfe~DGLL 263 (365)
T 3gjx_B 191 LDVMCWRGHPFYDCQTDFRFYWMHSKLPEEE--GLG---EKTKLNPFKFVGLKNFPCTPESLCDVLSM--DFPFEVDGLL 263 (365)
T ss_dssp EEEEEETTEECTTSCHHHHHHHHHHHGGGST--TTT---SCCSSCCSEEEECCEEECCHHHHHHHTTC--CCSSCEEEEE
T ss_pred EEEeeeCCcccccCchHHHHHHHHHHhhhcc--ccc---ccccCCCCceeccCCCCcCHHHHHHHhcc--CCCCccceEE
Confidence 9999999999999999999999987664311 010 1223457766666666544 33444442 2677899999
Q ss_pred EeeCCCCcccCCCcceEEecC
Q psy9353 434 FQPVDEPYVMGKAVDTLKWKP 454 (543)
Q Consensus 434 f~~~~spY~~G~~~~~lKWKp 454 (543)
|-...+-|.+|..+-+.=+||
T Consensus 264 FYHK~ahY~~G~TPLVgWLkP 284 (365)
T 3gjx_B 264 FYHKQTHYSPGSTPLVGWLRP 284 (365)
T ss_dssp EEETTCCCCSEEEEEEEEECH
T ss_pred EEeccccccCCCCccceecch
Confidence 999999999998764332244
No 99
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.39 E-value=5.4e-07 Score=100.35 Aligned_cols=82 Identities=17% Similarity=0.118 Sum_probs=61.7
Q ss_pred ecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHh-----CCCCHHHHHHHHHhcCCCCCC
Q psy9353 92 CEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEE-----MNFDVSAAIFAFSMARPPGIY 166 (543)
Q Consensus 92 ~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~-----~~~s~~~Al~~~~~~R~~~i~ 166 (543)
++||| +|... +..|+..+.+.. ...+++|+|||.+|.||||+++|+.++-. ..+++.+++..+++.|++.|.
T Consensus 494 WPD~g-vP~~~-~~~li~~v~~~~-~~~~~PivVHCsaGiGRtGtf~a~~~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vq 570 (627)
T 2nlk_A 494 WPNPD-APISS-TFELINVIKEEA-LTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFT 570 (627)
T ss_dssp SSCTT-SCGGG-HHHHHHHHHHHH-TTCCSCEEEEESSSCHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTSSC
T ss_pred CCCCC-cCChh-HHHHHHHHHHhh-ccCCCeEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhhcC
Confidence 77886 55433 456666665532 23568999999999999999999985422 247999999999999999999
Q ss_pred CHHHHHHHHH
Q psy9353 167 KQDYLNELFR 176 (543)
Q Consensus 167 ~~~yi~~L~~ 176 (543)
..+...-+|+
T Consensus 571 t~~Qy~f~y~ 580 (627)
T 2nlk_A 571 DIEQYQFIYK 580 (627)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9865555544
No 100
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.34 E-value=8.2e-07 Score=98.89 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=61.8
Q ss_pred cEEEEE-EecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHH-----hCCCCHHHHHHHHH
Q psy9353 85 IAYIKI-QCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVE-----EMNFDVSAAIFAFS 158 (543)
Q Consensus 85 i~y~~i-p~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~-----~~~~s~~~Al~~~~ 158 (543)
+.++++ .++|||.|++...+..|+..+... .....++|+|||.+|.||||++||+.++- ...+++.+++..++
T Consensus 193 V~h~~y~~WPD~gvP~~~~~ll~~i~~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR 271 (627)
T 2nlk_A 193 VIQYHYTQWPDMGVPEYALPVLTFVRRSSAA-RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIR 271 (627)
T ss_dssp EEEEEECCCCSSSSCSCSHHHHHHHHHHHHT-CCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHT
T ss_pred EEEEecCCCCCCCCCcChHHHHHHHHHHHhh-ccCCCceEEEEcCCCCCCccEEEEHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 344443 378997665666666666555432 11245899999999999999999987552 23469999999999
Q ss_pred hcCCCCCCCHH
Q psy9353 159 MARPPGIYKQD 169 (543)
Q Consensus 159 ~~R~~~i~~~~ 169 (543)
+.|+..|....
T Consensus 272 ~qR~~~Vqt~~ 282 (627)
T 2nlk_A 272 TQRNYLVQTEE 282 (627)
T ss_dssp TTSTTSSCCHH
T ss_pred hhCCCCCCcHH
Confidence 99999999875
No 101
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=97.20 E-value=0.00058 Score=70.38 Aligned_cols=68 Identities=18% Similarity=0.085 Sum_probs=59.7
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhhC-CCCeEEEEcCCCCC--h--hHHHHHHHHHHhCCCCHHHHHHHHHhcC
Q psy9353 93 EGHKEAPNEKQTRVFINLCSKFISKS-PLEKIGVHCTHGFN--R--TGFLLISYLVEEMNFDVSAAIFAFSMAR 161 (543)
Q Consensus 93 ~dhg~~P~~e~i~~f~~~v~~fl~~~-~~~~V~VHC~~G~~--R--TG~~ia~yLi~~~~~s~~~Al~~~~~~R 161 (543)
.|+| |.+..++-+|+..+++.|++. ..+.++|||+.|.. | +.++++||+|...++++++|+..+...-
T Consensus 49 ~dfg-p~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~~~ 121 (348)
T 1ohe_A 49 ADFG-PLNLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGE 121 (348)
T ss_dssp SCCC-CCCHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTT
T ss_pred hhcC-CccHHHHHHHHHHHHHHHhChhhcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhcC
Confidence 6775 999999999999999998863 34789999999985 4 8999999999999999999999998763
No 102
>1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A*
Probab=96.51 E-value=0.0079 Score=61.16 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=86.1
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--EecCccCCCCCCCCcC---CCCeEEEEEEEEecc----------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KISGLTFPHRKDPNKR---LTNTLLDGEMVIDRV---------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~~~~fP~~~~~~~~---~~~tlLDGElV~d~~---------- 345 (543)
.|++++|.||..+-|... +|. +..++|.+-.. .|+ .......+.... .....+-||+++.+.
T Consensus 114 ~~~~EpKiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEDVT-~nvrtI~~IP~~L~~p~~leVRGEv~m~~~~F~~lN~~~~ 191 (332)
T 1ta8_A 114 AYCCELKIDGLAISLRYE-NGVFVRGATRGDGTVGENIT-ENLRTVRSVPMRLTEPISVEVRGECYMPKQSFVALNEERE 191 (332)
T ss_dssp CEEEEEEECSEEEEEEEE-TTEEEEEEECTTSSEEEBCH-HHHTTCTTSCSBCSSCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEeeeecceEEEEEEE-CCEEEEEEcCCCCccchhHH-HHHHHhcCCccccCCCCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 699999999999988775 466 68999955432 111 111111121111 223689999998421
Q ss_pred --C------------C-----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccCCC
Q psy9353 346 --Q------------G-----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKLAE 400 (543)
Q Consensus 346 --~------------~-----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~~~ 400 (543)
+ | ...+.|++|++...+|.. -....+++..|+++-+... .
T Consensus 192 ~~g~~~faNPRNaAAGsLrqld~~ita~R~L~ff~y~i~~~~~~~--~~t~~e~l~~L~~~GF~v~-------------~ 256 (332)
T 1ta8_A 192 ENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMK--AKTQFEALEELSAIGFRTN-------------P 256 (332)
T ss_dssp HTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCC--CSBHHHHHHHHHHTTCCCC-------------T
T ss_pred hcCCccccChHHHHHHHHHccChhhHhhCCCEEEEEecccccCCC--CCCHHHHHHHHHHcCCCCC-------------C
Confidence 1 0 235799999994323322 2577889999987544110 0
Q ss_pred CeEEEeccccchhhHhhhhc----cccccccCCceEEEeeCCCCcc-----cCCCcce-EEecCC
Q psy9353 401 PFSVRVKDFWSVDKAGYLLS----DKFTLCHEPDGLIFQPVDEPYV-----MGKAVDT-LKWKPH 455 (543)
Q Consensus 401 pf~i~~k~~~~~~~~~~ll~----~~~~~~h~~DGLIf~~~~spY~-----~G~~~~~-lKWKp~ 455 (543)
...+ .+ .+..+.+..+ ..-.++++.||||+|-.+.++. ..+.+.| +=||+|
T Consensus 257 ~~~~-~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~tsk~PRWAiAyKfp 317 (332)
T 1ta8_A 257 ERQL-CQ---SIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP 317 (332)
T ss_dssp TCEE-ES---SHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred cceE-eC---CHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeEecCC
Confidence 0111 11 1222222222 1112889999999998876655 2234445 555655
No 103
>1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4
Probab=96.38 E-value=0.027 Score=55.06 Aligned_cols=101 Identities=17% Similarity=0.186 Sum_probs=64.5
Q ss_pred cccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCC-----------CCCcCC-----CCeEEEEEEE
Q psy9353 278 LAEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRK-----------DPNKRL-----TNTLLDGEMV 341 (543)
Q Consensus 278 l~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~-----------~~~~~~-----~~tlLDGElV 341 (543)
+....++|+||.||+-+-++..+ +++.+.+|++.+. +.-.|--.. .+...+ .+.+|=||++
T Consensus 25 ~~~~~vvvtEKldG~N~~i~~~~-~~i~~~sR~~~l~--~~~~f~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~GE~~ 101 (249)
T 1s68_A 25 LTGGEWVAREKIHGTNFSLIIER-DKVTCAKRTGPIL--PAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFA 101 (249)
T ss_dssp CSCSCEEEEECCCSEEEEEEEES-SCEEEEETTEECC--TTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCEEEEEEECCcceEEEEEC-CEEEEEeCCcccC--CCCccchHHHHHHHHHHHHHHHHHHhcccCCCcEEEEEEEc
Confidence 44568999999999999988864 6899999998532 111111110 001112 5677899999
Q ss_pred Eecc-CC--ccccEEEEEEEE-EECCccccCCCHHHHHHHHHHh
Q psy9353 342 IDRV-QG--QNIPRYLVYDII-RFDNNDVTRQKFTTRIQIIKVE 381 (543)
Q Consensus 342 ~d~~-~~--~~~~~ylifDil-~~~G~~v~~~p~~eR~~~L~~~ 381 (543)
--+. .+ .....|++|||. ..++....-+++.+|.+++++.
T Consensus 102 G~~Iq~~v~Y~~~~FyvFdI~~~~~~g~~~~l~~~~~~~l~~~~ 145 (249)
T 1s68_A 102 GPGIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTF 145 (249)
T ss_dssp STTTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHH
T ss_pred cccccCCcccCCCeEEEEEEEEecCCCccccCCHHHHHHHHHHC
Confidence 5321 11 013589999997 3343334567899999998874
No 104
>1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2
Probab=96.37 E-value=0.0073 Score=61.11 Aligned_cols=151 Identities=14% Similarity=0.144 Sum_probs=83.8
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Ccc----CCCCCCCCcCCCCeEEEEEEEEecc--------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GLT----FPHRKDPNKRLTNTLLDGEMVIDRV-------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~~----fP~~~~~~~~~~~tlLDGElV~d~~-------- 345 (543)
.|++++|.||..+-|... +|. +..++|.+-.. .|+ +++ .|.. +. ......+-||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~--L~-~p~~levRGEv~m~~~~F~~lN~~ 183 (318)
T 1b04_A 108 AYVCELAIDGLAVSVRYE-DGYFVQGATRGDGTTGEDITENLKTIRSLPLR--LK-EPVSLEARGEAFMPKASFLRLNEE 183 (318)
T ss_dssp CEEEEEEESSEEEEEEEE-TTEEEEEEECTTSSCEEBCHHHHHTCTTSCSB--CS-SCCCEEEEEEEECCHHHHHHHHHH
T ss_pred eEEEEEecccEEEEEEEE-CCEEEEEEccCCCcccHHHHHhHHHhcCCCcc--cC-CCCeEEEEEEEEEEHHHHHHHHHH
Confidence 799999999999988775 454 57899944321 111 111 1211 11 1233689999998421
Q ss_pred ----C------------C-----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccC
Q psy9353 346 ----Q------------G-----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKL 398 (543)
Q Consensus 346 ----~------------~-----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~ 398 (543)
+ | ..++.|++|++...+|.. -.+..+++..|+++-+.--
T Consensus 184 ~~~~g~~~faNpRNaAAGsLrqld~~ita~R~L~ff~y~~~~~~~~~--~~t~~e~l~~L~~~Gf~v~------------ 249 (318)
T 1b04_A 184 RKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEALG--IASHSEALDYLQALGFKVN------------ 249 (318)
T ss_dssp HHHC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTTTT--CCBHHHHHHHHHHTTCCCC------------
T ss_pred HHHcCCCccchhhHHHHHHHHccChhhHhhCCCEEEEEecccccCCC--CCCHHHHHHHHHHcCCCCC------------
Confidence 0 0 235799999983222222 2567889999887543110
Q ss_pred CCCeEEEeccccchhhHhhhhcc----ccccccCCceEEEeeCCCCcc-----cCCCcce-EEecCC
Q psy9353 399 AEPFSVRVKDFWSVDKAGYLLSD----KFTLCHEPDGLIFQPVDEPYV-----MGKAVDT-LKWKPH 455 (543)
Q Consensus 399 ~~pf~i~~k~~~~~~~~~~ll~~----~~~~~h~~DGLIf~~~~spY~-----~G~~~~~-lKWKp~ 455 (543)
....+ .+ .+..+.+..+. .-.++++.||||+|-.+.++. ..+.+.| +=||+|
T Consensus 250 -~~~~~-~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfp 311 (318)
T 1b04_A 250 -PERRR-CA---NIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFP 311 (318)
T ss_dssp -TTCEE-ES---SHHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECC
T ss_pred -CcceE-eC---CHHHHHHHHHHHHHHHhhCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeeecCC
Confidence 00111 11 12222222221 112889999999998876655 2234445 555544
No 105
>2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A*
Probab=95.92 E-value=0.067 Score=54.59 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=65.0
Q ss_pred cccCCcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeEecCccCCCCC-----------CCCcCC-----CCeEEEEEEE
Q psy9353 278 LAEKKYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYKISGLTFPHRK-----------DPNKRL-----TNTLLDGEMV 341 (543)
Q Consensus 278 l~~~~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~v~~~~fP~~~-----------~~~~~~-----~~tlLDGElV 341 (543)
+....++|+||.||+-+-++.. .+++.+.+|++.+. +.-.|.-.. .+...+ .+.+|=||++
T Consensus 26 l~~~~vvvtEKlDG~N~~i~~~-~~~i~~~sR~~~l~--~~~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~i~GE~~ 102 (335)
T 2hvq_A 26 LTGGEWVAREXIHGTNFSLIIE-RDKVTCAKRTGPIL--PAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFA 102 (335)
T ss_dssp CSCSCEEEEECCSSEEEEEEEE-TTEEEEEETTEECC--TTCCCTTTHHHHHHHHHHHHHHHTTHHHHTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEecCcceEEEEE-CCEEEEecCCcccC--CccccchHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEEEc
Confidence 4456899999999999998886 46899999998532 111111111 011112 4677899999
Q ss_pred EeccC-C--ccccEEEEEEEE-EECCccccCCCHHHHHHHHHHh
Q psy9353 342 IDRVQ-G--QNIPRYLVYDII-RFDNNDVTRQKFTTRIQIIKVE 381 (543)
Q Consensus 342 ~d~~~-~--~~~~~ylifDil-~~~G~~v~~~p~~eR~~~L~~~ 381 (543)
--+.. + .....|++|||. ..++..-.-+++.+|.++++..
T Consensus 103 G~~Iq~~i~Y~~~~FyvFDI~~~~~~~~~~~l~~~~~~~l~~~~ 146 (335)
T 2hvq_A 103 GPGIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTF 146 (335)
T ss_dssp SBTTBSSCCCCSSEEEEEEEEEEETTCCEEECCHHHHHHHHHHH
T ss_pred cCcccCCcccCCCeEEEEEEEEecCCCceeeCCHHHHHHHHHHc
Confidence 43211 1 013589999997 3343334558999999998874
No 106
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=94.23 E-value=1.2 Score=48.70 Aligned_cols=179 Identities=13% Similarity=0.174 Sum_probs=95.5
Q ss_pred CCcEEEEcCCceEEEEEEEeCCe-EEEEECCCCeeE--ec-Ccc----CCCCCCCCcCCCCeEEEEEEEEecc-------
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMYK--IS-GLT----FPHRKDPNKRLTNTLLDGEMVIDRV------- 345 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~~--v~-~~~----fP~~~~~~~~~~~tlLDGElV~d~~------- 345 (543)
-.|++++|.||.-+.|... +|. +..++|.+-..- |+ +++ .|.............+=||+++.+.
T Consensus 108 ~~~~~epKiDGlavsL~Ye-~G~Lv~a~TRGDG~~GeDiT~nvrtI~~IPl~l~~~~~p~~leVRGEv~m~~~~F~~ln~ 186 (586)
T 4glx_A 108 VTWCCELKLDGLAVSILYE-NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINE 186 (586)
T ss_dssp -CEEEEEEESSEEEEEEEE-TTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCCSSSCCSEEEEEEEEECCHHHHHHHHH
T ss_pred ceEEEEEeecceEEEEEEe-CCEEEEEEccCCCcccccHHHHHHhccCcccccccCCCCceEEEEEEEEEEhhhccccch
Confidence 4799999999999877665 456 688999765331 11 111 1211000011123567899998421
Q ss_pred -----C------------C-----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhcccc
Q psy9353 346 -----Q------------G-----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINK 397 (543)
Q Consensus 346 -----~------------~-----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~ 397 (543)
+ | ...+.|++|++...+|.+.. ....+++..|+++-+.-
T Consensus 187 ~~~~~g~~~faNpRNaaAGslrqld~~~~a~r~L~f~~y~v~~~~~~~~~-~t~~e~l~~L~~~Gf~v------------ 253 (586)
T 4glx_A 187 DARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKKWGLPV------------ 253 (586)
T ss_dssp HHHHTTCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC-SBHHHHHHHHHHTTCCC------------
T ss_pred hhhhccCccchhhHHHHhccccccchhhhhccccceeEeeeeeeeccccc-ccHHHHHHHHHHcCCCC------------
Confidence 0 0 23578999999888876543 34678888887743310
Q ss_pred CCCCeEEEeccccch-hhHhhhhccccccccCCceEEEeeCCCCccc--C---CCcce-EEecCCcceeEEEEEEEEe-e
Q psy9353 398 LAEPFSVRVKDFWSV-DKAGYLLSDKFTLCHEPDGLIFQPVDEPYVM--G---KAVDT-LKWKPHTMNSIDFLMKIET-R 469 (543)
Q Consensus 398 ~~~pf~i~~k~~~~~-~~~~~ll~~~~~~~h~~DGLIf~~~~spY~~--G---~~~~~-lKWKp~~~ntvDF~l~~~~-~ 469 (543)
...+.+ .+....+ ...+.+....-.+.++.||||++-.+-++.. | +.+.| +=||+|...-.--+..+.. .
T Consensus 254 -~~~~~~-~~~~~~~~~~~~~~~~~R~~l~y~iDGiVikvn~~~~~~~lG~ts~~PrwAiA~Kfp~e~~~T~v~~I~~qV 331 (586)
T 4glx_A 254 -SDRVTL-CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQV 331 (586)
T ss_dssp -CTTCEE-ESSHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEECCCCCEEEEEEEEEEEEE
T ss_pred -ccceee-eccHHHHHHHHHHHHHhhhcccccCCceEEEecchhhhhccCCccCCCCeeEEEcccchhheeEeEEEEEec
Confidence 001111 1111111 1111222211127899999999976543321 2 33444 6667665554444444432 3
Q ss_pred cCCCcc
Q psy9353 470 SGLGIL 475 (543)
Q Consensus 470 ~~~g~~ 475 (543)
++.|.+
T Consensus 332 GRTG~i 337 (586)
T 4glx_A 332 GRTGAI 337 (586)
T ss_dssp CTTSBE
T ss_pred CCceEE
Confidence 556643
No 107
>4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae}
Probab=93.61 E-value=0.32 Score=48.81 Aligned_cols=150 Identities=16% Similarity=0.208 Sum_probs=82.5
Q ss_pred CCcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Ccc----CCCCCCCCcCCCCeEEEEEEEEecc-------
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GLT----FPHRKDPNKRLTNTLLDGEMVIDRV------- 345 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~~----fP~~~~~~~~~~~tlLDGElV~d~~------- 345 (543)
..|++++|.||.-+.|... +|. +..++|.+-.. .|+ +++ .|.. +.. .....+=||+++.+.
T Consensus 102 ~~~~~epKiDGlavsL~Y~-~G~L~~a~TRGDG~~GeDiT~n~~tI~~IP~~--l~~-~~~levRGEv~m~~~~F~~~n~ 177 (305)
T 4glw_A 102 PTYICELKIDGLSISLTYE-KGILVAGVTRGDGSIGENITENLKRVKDIPLT--LPE-ELDITVRGECYMPRASFDQVNQ 177 (305)
T ss_dssp CCEEEEEEECSEEEEEEEE-TTEEEEEEECTTSSEEEECHHHHTTSTTSCSB--CSS-CCCEEEEEEEECCHHHHHHHHH
T ss_pred CcEEEEeeecceEEEEEEe-CCeEEEEEecCCCcchhhHHHHHhhccCCccc--CCC-cccccccceEEeehhhHHHHHH
Confidence 3699999999999877764 455 67899986433 111 111 2211 111 134678999998421
Q ss_pred ----CC------------------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhcccc
Q psy9353 346 ----QG------------------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINK 397 (543)
Q Consensus 346 ----~~------------------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~ 397 (543)
.| ...+.|++|++...+| .....+++..|+++-+.
T Consensus 178 ~~~~~g~~~faNpRNaaAGslrq~d~~~~~~r~L~f~~y~~~~~~~----~~s~~e~l~~L~~~Gf~------------- 240 (305)
T 4glw_A 178 ARQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPST----RDSQEKGLKYLEQLGFV------------- 240 (305)
T ss_dssp HHHHTTCCCCSSHHHHHHHHHSSSBHHHHHHSCCEEEEEEESSSCS----SSBHHHHHHHHHHHTCC-------------
T ss_pred HHHhcCCccchhhhHHHhhhhhccCchhhhhhcceEEEeeeccccc----cchHHHHHHHHHhCCCc-------------
Confidence 01 1247899999854443 23567888888774331
Q ss_pred CCCCeEEEeccccchhhHhhhhc----cccccccCCceEEEeeCCCCcc--cC---CCcce-EEecCC
Q psy9353 398 LAEPFSVRVKDFWSVDKAGYLLS----DKFTLCHEPDGLIFQPVDEPYV--MG---KAVDT-LKWKPH 455 (543)
Q Consensus 398 ~~~pf~i~~k~~~~~~~~~~ll~----~~~~~~h~~DGLIf~~~~spY~--~G---~~~~~-lKWKp~ 455 (543)
..|.....+. +..+.+..+ ..-.++++.||||++=.+-++. .| +.+.| +=||+|
T Consensus 241 -~~~~~~~~~~---~~ev~~~~~~~~~~R~~l~y~iDGiVikvn~~~~q~~lG~tsk~PrWAiA~Kfp 304 (305)
T 4glw_A 241 -VNPKRILAEN---IDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP 304 (305)
T ss_dssp -CCCCCEEESS---HHHHHHHHHHHHHHGGGSSSCEEEEEEEECBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred -cCCceEEeCC---HHHHHHHHHHHHHHhhcCCCCCCeEEEEEeCHHHHHHcCCcCCCCCceEEeCcc
Confidence 0011111111 222222222 1112789999999986654332 12 23344 777765
No 108
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=92.93 E-value=0.013 Score=59.62 Aligned_cols=154 Identities=11% Similarity=0.106 Sum_probs=83.7
Q ss_pred CCcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Cc----cCCCCC-CCC--cCCCCeEEEEEEEEecc----
Q psy9353 281 KKYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GL----TFPHRK-DPN--KRLTNTLLDGEMVIDRV---- 345 (543)
Q Consensus 281 ~~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~----~fP~~~-~~~--~~~~~tlLDGElV~d~~---- 345 (543)
-.|++++|.||..+-|... +|. +..++|.+-.. .|+ ++ ..|..- ... .......+-||+++.+.
T Consensus 116 ~~~~~EpKiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~~g~~~~~p~~leVRGEv~m~~~~F~~ 194 (328)
T 1zau_A 116 AHYLCELKIDGVALSLVYR-EGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQA 194 (328)
T ss_dssp SCEEEEEEECSEEEEEECG-GGBCCBCBBCTTSSEECBCHHHHHHSSSCCSBCCCBTTBCCCSCCEEEEEEBCCHHHHHH
T ss_pred cceEEeeecceEEEEEEEE-CCEEEEEEccCCCcccHHHHHHHHHhcCCChhhccCCcCCCCCeEEEEEEEEEEHHHHHH
Confidence 3799999999999987764 343 57888954322 011 11 123211 000 01123689999998521
Q ss_pred -------CC------------------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhc
Q psy9353 346 -------QG------------------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSR 394 (543)
Q Consensus 346 -------~~------------------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~ 394 (543)
.| +.++.|++|++...++.. -....+++..|+++-+.-
T Consensus 195 lN~~~~~~g~~~faNPRNaAAGsLrqld~~ita~R~L~f~~y~i~~~~~~~--~~t~~e~l~~L~~~Gf~v--------- 263 (328)
T 1zau_A 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFR--PATLHQAYLALRAWGLPV--------- 263 (328)
T ss_dssp HHHSCSSTTSCCCSSHHHHHHHHHTCSSHHHHHHSCCBCCCCBCCCCSSCC--CSBHHHHHHHHHTTTCCC---------
T ss_pred HHHHHHHcCCccccChHHHHHHHHHccChhhhhcCcceEEEEeccccCCCC--CCCHHHHHHHHHHcCCCC---------
Confidence 01 124789999984434322 246788888888754310
Q ss_pred cccCCCCeEEEeccccchhhHhhhhcccc-----ccccCCceEEEeeCCCCccc-----CCCcce-EEecCC
Q psy9353 395 INKLAEPFSVRVKDFWSVDKAGYLLSDKF-----TLCHEPDGLIFQPVDEPYVM-----GKAVDT-LKWKPH 455 (543)
Q Consensus 395 ~~~~~~pf~i~~k~~~~~~~~~~ll~~~~-----~~~h~~DGLIf~~~~spY~~-----G~~~~~-lKWKp~ 455 (543)
.|. .+.+-.+..+.+..+ .+ .++++.||||+|-.+.++.- .+.+.| +=||+|
T Consensus 264 -----~~~---~~~~~~~~ev~~~~~-~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiAyKfp 326 (328)
T 1zau_A 264 -----SEH---TTLATDLAGVRERID-YWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYP 326 (328)
T ss_dssp -----CCC---CCCBCHHHHHHHHHH-HTTTTCSSCSSCEEEEEEEECBHHHHTTSCBCSSSBSSCCCEECC
T ss_pred -----CCc---eEEeCCHHHHHHHHH-HHHHHHhcCCCCCceEEEEecCHHHHHHhCccCCCCCceeEeCCC
Confidence 000 011112223333322 12 18899999999988765542 233444 455554
No 109
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=91.60 E-value=0.058 Score=52.41 Aligned_cols=51 Identities=41% Similarity=0.752 Sum_probs=43.2
Q ss_pred cceeeeeeecccccccccccccccCCeeeEEeecCCCCCCCchhHhcccce
Q psy9353 13 SVEFESKSNLTKTSRFYNKSEVEENDIAYIKIQCEGHKEAPNEKQTRLKIG 63 (543)
Q Consensus 13 ~~~~~~~idlt~t~ryY~~~~i~~~G~~~~Ki~c~gr~~~p~~es~~~~i~ 63 (543)
+..++.||||+++.++|+.+.+++.|+.|.++++..|...|..+.+...+.
T Consensus 80 ~~~i~~VInL~~e~~~y~~~~~~~~gi~y~~~p~~D~~~~P~~~~l~~~~~ 130 (241)
T 2c46_A 80 KVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIR 130 (241)
T ss_dssp TCEEEEEEECSSCSCSSCTHHHHTTTCEEEECCCCCTTCCCCHHHHHHHHH
T ss_pred CCCcceeeeccCCCCCCCHHHHHHCCCEEEEEecCCCCCCCChHHHHHHHH
Confidence 458999999999999999999999999999999998876777776554433
No 110
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=89.17 E-value=3.3 Score=45.88 Aligned_cols=174 Identities=13% Similarity=0.177 Sum_probs=93.7
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCeeE--ec-Cc----cCCCCCCCCcCCCCeEEEEEEEEecc--------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMYK--IS-GL----TFPHRKDPNKRLTNTLLDGEMVIDRV-------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~~--v~-~~----~fP~~~~~~~~~~~tlLDGElV~d~~-------- 345 (543)
.|++++|.||.-+-|... +|. +...+|.+-..- |+ |+ ..|..-..........+=||+++.+.
T Consensus 109 ~~~~e~KiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEdvT~n~rtI~~IP~~l~~~~~p~~levRGEv~m~~~~F~~lN~~ 187 (671)
T 2owo_A 109 TWCCELKLDGLAVSILYE-NGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINED 187 (671)
T ss_dssp CEEEEEEESSEEEEEEEE-TTEEEEEECCTTSSEEEBCHHHHHTCTTSCSBCCSSSCCSEEEEEEEEECCHHHHHHHHHH
T ss_pred eEEEEEecceEEEEEEEe-CCEEEEEEecCCCcchhhHHHHHhhhcCCCccccCCCCCCeEEEEEEEEEEHHHHHHHHHH
Confidence 799999999999987775 455 568889664321 11 11 12321100001122578999998521
Q ss_pred ----C------------C-----------ccccEEEEEEEEEECC-ccccCCCHHHHHHHHHHhhhhhhHHHhhhhcccc
Q psy9353 346 ----Q------------G-----------QNIPRYLVYDIIRFDN-NDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINK 397 (543)
Q Consensus 346 ----~------------~-----------~~~~~ylifDil~~~G-~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~ 397 (543)
+ | ..++.|++|++-..+| .+. ....+++..|+++-+.-.
T Consensus 188 ~~~~g~~~faNpRNaaAGsLrqld~~~~a~R~L~~~~y~~~~~~~~~~~--~t~~e~l~~L~~~Gf~v~----------- 254 (671)
T 2owo_A 188 ARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP--DTHLGRLLQFKKWGLPVS----------- 254 (671)
T ss_dssp HHHSSCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC--SBHHHHHHHHHHHTCCCC-----------
T ss_pred HHhcCCCcccChHHHHHHHHHhcChhhHhcCCCEEEEEECcccCCCCCC--CCHHHHHHHHHHCCCCCC-----------
Confidence 1 0 2357999999965554 322 467888888887543110
Q ss_pred CCCCeEEEeccccchhhHhhhhcc----ccccccCCceEEEeeCCCCcc-----cCCCcce-EEecCCcceeEEEEEEEE
Q psy9353 398 LAEPFSVRVKDFWSVDKAGYLLSD----KFTLCHEPDGLIFQPVDEPYV-----MGKAVDT-LKWKPHTMNSIDFLMKIE 467 (543)
Q Consensus 398 ~~~pf~i~~k~~~~~~~~~~ll~~----~~~~~h~~DGLIf~~~~spY~-----~G~~~~~-lKWKp~~~ntvDF~l~~~ 467 (543)
....+ .+ .+..+.+..+. .-.++++.||+|+|=.+-++. ..+.+.| +=||+|...-.--++.|.
T Consensus 255 --~~~~~-~~---~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~~~T~l~~I~ 328 (671)
T 2owo_A 255 --DRVTL-CE---SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVE 328 (671)
T ss_dssp --TTCEE-ES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCCEEEEEEEEEE
T ss_pred --Cccee-eC---CHHHHHHHHHHHHHHHhcCCCCCccEEEEecCHHHHHHhCcccCCCCceEEEcCCCceEEEEEEEEE
Confidence 00111 11 12222222221 112899999999997765443 2234455 555655554444444443
Q ss_pred e-ecCCCcc
Q psy9353 468 T-RSGLGIL 475 (543)
Q Consensus 468 ~-~~~~g~~ 475 (543)
. .++.|.+
T Consensus 329 ~qVGRTG~i 337 (671)
T 2owo_A 329 FQVGRTGAI 337 (671)
T ss_dssp EEECTTSBE
T ss_pred EecCCCcee
Confidence 2 3566654
No 111
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=89.08 E-value=2 Score=47.02 Aligned_cols=173 Identities=13% Similarity=0.145 Sum_probs=93.1
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Cc----cCCCCCCCCc---CCCCeEEEEEEEEecc-----
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GL----TFPHRKDPNK---RLTNTLLDGEMVIDRV----- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~----~fP~~~~~~~---~~~~tlLDGElV~d~~----- 345 (543)
.|++++|.||.=+-|... +|. +...+|.+-.. .|+ ++ ..|..-.... ......+=||+++.+.
T Consensus 117 ~~~~EpKiDGlavsL~Ye-~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~~~~~~~~p~~levRGEv~m~~~~F~~l 195 (615)
T 3sgi_A 117 HYLCELKIDGVALSLVYR-EGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQAL 195 (615)
T ss_dssp CEEEEEEECSEEEEEEEE-TTEEEEEECCTTSSSCBCCHHHHHSCSSSCSSCCCCSSCCCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEEecceEEEEEEE-CCEEEEEEecCCCcchhhHHHHHHhhcCcchhhcCCcccCCCCeEEEEEEEEEeHHHHHHH
Confidence 799999999999987775 455 57889965422 011 11 1232111000 1123678999998521
Q ss_pred ------CC------------------------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhcc
Q psy9353 346 ------QG------------------------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRI 395 (543)
Q Consensus 346 ------~~------------------------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~ 395 (543)
.| ..++.|++|.+...+|... ....++++.|+++-+.-
T Consensus 196 N~~~~~~g~~~faNpRNaAAGsLRqld~~ita~R~L~~f~y~~~~~~~~~~--~t~~e~l~~L~~~Gf~v---------- 263 (615)
T 3sgi_A 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLPV---------- 263 (615)
T ss_dssp HTTCSSSSSCCCSSHHHHHHHHHTCSSTTHHHHSCCEEEEEEEEEEESCCC--SBTTTHHHHHHHTTCCC----------
T ss_pred HHHHHHcCCCcCCChHHHHHHHHHcCChhhHhhCcceEEEEeccccCCCCC--cCHHHHHHHHHHCCCCC----------
Confidence 01 1357899999987765432 24567888887653310
Q ss_pred ccCCCCeEEEeccccchhhHhhhhcccc-----ccccCCceEEEeeCCCCccc--C---CCcce-EEecCCcceeEEEEE
Q psy9353 396 NKLAEPFSVRVKDFWSVDKAGYLLSDKF-----TLCHEPDGLIFQPVDEPYVM--G---KAVDT-LKWKPHTMNSIDFLM 464 (543)
Q Consensus 396 ~~~~~pf~i~~k~~~~~~~~~~ll~~~~-----~~~h~~DGLIf~~~~spY~~--G---~~~~~-lKWKp~~~ntvDF~l 464 (543)
.+.. +.+-.+..+.+..+ .+ .+++..||+|+|=.+-++.- | +.+.| +=||+|...-.--+.
T Consensus 264 ----~~~~---~~~~~~~ev~~~~~-~~~~~R~~l~y~iDGvViKvn~~~~q~~lG~t~k~PRWAiA~Kfpaee~~T~l~ 335 (615)
T 3sgi_A 264 ----SEHT---TLATDLAGVRERID-YWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLL 335 (615)
T ss_dssp ----CCCC---CCBSSHHHHHHHHT-TTTTSGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCSEEEEECC
T ss_pred ----CCCe---EeeCCHHHHHHHHH-HHHHHhhcCCCCCCeEEEEecCHHHHHHhCCCCCCCCceEEEcCCCceeEEEEE
Confidence 0100 11112233333333 12 28999999999987654432 2 33445 556655443333333
Q ss_pred EEEe-ecCCCcc
Q psy9353 465 KIET-RSGLGIL 475 (543)
Q Consensus 465 ~~~~-~~~~g~~ 475 (543)
.|.. .++.|.+
T Consensus 336 ~I~~qVGRTG~i 347 (615)
T 3sgi_A 336 DIRVNVGRTGRI 347 (615)
T ss_dssp EECCCBCSSSCB
T ss_pred EEEEecCCCcee
Confidence 3332 2455643
No 112
>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A*
Probab=88.97 E-value=1.8 Score=43.56 Aligned_cols=137 Identities=17% Similarity=0.220 Sum_probs=78.2
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Cc----cCCCCCCCCcCCCCeEEEEEEEEecc--------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GL----TFPHRKDPNKRLTNTLLDGEMVIDRV-------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~----~fP~~~~~~~~~~~tlLDGElV~d~~-------- 345 (543)
.|++++|.||.-+-|... +|. +..++|.+-.. .|+ ++ ..|.. +... ....+=||+++.+.
T Consensus 106 ~~~~EpKiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~--L~~~-~~levRGEv~m~~~~F~~lN~~ 181 (318)
T 3jsl_A 106 EYMCELKIDGLAVSLKYV-DGYFVQGLTRGDGTTGEDITENLKTIHAIPLK--MKEP-LNVEVRGEAYMPRRSFLRLNEE 181 (318)
T ss_dssp CEEEEEEECSEEEEEEEE-TTEEEEEEECTTSSEEEBCHHHHTTCTTSCSB--CSSC-CCEEEEEEEECCHHHHHHHHHH
T ss_pred eEEEEEeecceEEEEEEE-CCEEEEEEeCCCCccchhHHHHHHHhcCCccc--cCCC-CcEEEEEEEEEcHHHHHHHHHH
Confidence 799999999999987775 455 57899965432 011 11 11211 1111 24678999998421
Q ss_pred ----------C------C-----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccC
Q psy9353 346 ----------Q------G-----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKL 398 (543)
Q Consensus 346 ----------~------~-----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~ 398 (543)
+ | ...+.|++|.+...+|... ....+++..|+++-+.-
T Consensus 182 ~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~--~t~~e~l~~L~~~GF~v------------- 246 (318)
T 3jsl_A 182 KEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNA--RSQSEALDELDKLGFTT------------- 246 (318)
T ss_dssp HBTTBCCCCSSHHHHHHHHHSCSCHHHHHHSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHHTCCC-------------
T ss_pred HHHhCCccccChHHHHHHHHHccChhhhhhCcceEEEEecccccCCCC--CCHHHHHHHHHHCCCCc-------------
Confidence 0 1 2357899999976554332 45788888888753310
Q ss_pred CCCeEEEeccccchhhHhhhhcc----ccccccCCceEEEeeCCCCc
Q psy9353 399 AEPFSVRVKDFWSVDKAGYLLSD----KFTLCHEPDGLIFQPVDEPY 441 (543)
Q Consensus 399 ~~pf~i~~k~~~~~~~~~~ll~~----~~~~~h~~DGLIf~~~~spY 441 (543)
.|..-..+ .+..+.+..+. .-.+++..||+|+|=.+-.+
T Consensus 247 -~~~~~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~ 289 (318)
T 3jsl_A 247 -NKNRARVN---NIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQ 289 (318)
T ss_dssp -CTTCEEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHH
T ss_pred -CCcceEeC---CHHHHHHHHHHHHHHHhcCCCCCCcEEEEEeCHHH
Confidence 01111111 12222222221 11289999999999876543
No 113
>3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A*
Probab=88.64 E-value=3.8 Score=41.27 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=86.2
Q ss_pred CcEEEEcCCceEEEEEEEeCCe-EEEEECCCCee--Eec-Cc----cCCCCCCCCcCCCCeEEEEEEEEecc--------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADE-IYFTDRDFSMY--KIS-GL----TFPHRKDPNKRLTNTLLDGEMVIDRV-------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~-vyLidR~~~~~--~v~-~~----~fP~~~~~~~~~~~tlLDGElV~d~~-------- 345 (543)
.|++++|.||.-+-|... +|. +...+|.+-.. .|+ ++ ..|..-..........+=||+++.+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye-~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IPl~L~~~~~p~~leVRGEv~m~~~~F~~lN~~ 186 (322)
T 3uq8_A 108 TFCCEPKLDGLAVSILYV-NGELTQAATRGDGTTGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHAGFERLNKY 186 (322)
T ss_dssp EEEEEEEESSEEEEEEEE-TTEEEEEEECTTSSEEEBCHHHHHTCTTSCSBCSCSSCCSEEEEEEEEECCHHHHHHHHHH
T ss_pred eEEEEEeeceEEEEEEEe-CCEEEEEEecCCCccchhHHHHHHHhcCCCccccCCCCCceEEEEEEEEeeHHHHHHHHHH
Confidence 699999999999987774 455 57899966432 111 11 12321100001123568999998531
Q ss_pred ----C------------C-----------ccccEEEEEEEEEECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccccC
Q psy9353 346 ----Q------------G-----------QNIPRYLVYDIIRFDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRINKL 398 (543)
Q Consensus 346 ----~------------~-----------~~~~~ylifDil~~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~~~ 398 (543)
+ | ...+.|++|.+...+|... -....+++..|+++-+.-
T Consensus 187 ~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~-~~t~~e~l~~L~~~Gf~v------------- 252 (322)
T 3uq8_A 187 ALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDL-PTTHYARLQWLKSIGIPV------------- 252 (322)
T ss_dssp HHHTTCCCCSSHHHHHHHHHTCSCHHHHTTSCCEEEEEEEEEEESCCC-CSBHHHHHHHHHHTTCCC-------------
T ss_pred HHHhCCccccchhHHHHHHHhhcChhhhhcCccEEEEEeccccCCCCC-CCCHHHHHHHHHHcCCCC-------------
Confidence 1 1 2357999999987766432 246788999888754310
Q ss_pred CCCeEEEeccccchhhHhhhhc----cccccccCCceEEEeeCCCCccc--C---CCcce-EEecCCc
Q psy9353 399 AEPFSVRVKDFWSVDKAGYLLS----DKFTLCHEPDGLIFQPVDEPYVM--G---KAVDT-LKWKPHT 456 (543)
Q Consensus 399 ~~pf~i~~k~~~~~~~~~~ll~----~~~~~~h~~DGLIf~~~~spY~~--G---~~~~~-lKWKp~~ 456 (543)
.+..-..+ .+..+.+..+ ..-.+++..||+|+|=.+-++.- | +.+.| +=||+|.
T Consensus 253 -~~~~~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 316 (322)
T 3uq8_A 253 -NPEIRLCN---GADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA 316 (322)
T ss_dssp -CTTCEEEE---SHHHHHHHHHHHHHTTTTTSSCEEEEEEEESBHHHHHHHCEETTEETTEEEEECCC
T ss_pred -CCCcEEeC---CHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHcCccCCCCCceEEEcCCc
Confidence 01111111 1222222222 11128999999999977654432 2 23344 5556553
No 114
>1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4
Probab=88.11 E-value=3.1 Score=40.80 Aligned_cols=99 Identities=18% Similarity=0.272 Sum_probs=61.7
Q ss_pred ccCCcEEEEcCCceEEEEEE--EeCCe--EEEEECCCCeeEecCccCCCCC-----------CCC---------cCCCCe
Q psy9353 279 AEKKYMVSWKADGTRYMMYI--KNADE--IYFTDRDFSMYKISGLTFPHRK-----------DPN---------KRLTNT 334 (543)
Q Consensus 279 ~~~~y~v~~K~DG~R~ll~i--~~~~~--vyLidR~~~~~~v~~~~fP~~~-----------~~~---------~~~~~t 334 (543)
....|+|+||.||.-+-+++ ++ +. +..-.|++-. .++-.|-... .+. ..+...
T Consensus 31 ~~~ewvatEKIHGaNFsii~~~d~-~~~~i~~akRs~~l--~~~e~FfGy~~i~~~l~~~~~~l~~~l~~~~~~~~~~~v 107 (277)
T 1xdn_A 31 AAQEWVACEKVHGTNFGIYLINQG-DHEVVRFAKRSGIM--DPNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRL 107 (277)
T ss_dssp GGSCEEEEEECCSEEEEEEEEEET-TEEEEEEEETTEEC--CTTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSEE
T ss_pred CCCcEEEEEeeccccEEEEEecCC-CeeEEEEeeccccc--CcccccccHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Confidence 45589999999999998887 43 34 7888888631 1222222100 000 113556
Q ss_pred EEEEEEEEec----------------------------cCCc---c--ccEEEEEEEEEECC---ccccCCCHHHHHHHH
Q psy9353 335 LLDGEMVIDR----------------------------VQGQ---N--IPRYLVYDIIRFDN---NDVTRQKFTTRIQII 378 (543)
Q Consensus 335 lLDGElV~d~----------------------------~~~~---~--~~~ylifDil~~~G---~~v~~~p~~eR~~~L 378 (543)
++=|||.--. .++- . ...|++|||...++ .+..-++|.+=.+.+
T Consensus 108 ~VyGELfGg~y~hp~v~~~~~~~~~~~~~~~p~~~~~IQ~~i~~~Y~p~~~FYaFDI~~~~~~~~~~~~~L~fd~~~~~~ 187 (277)
T 1xdn_A 108 VLNGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEFS 187 (277)
T ss_dssp EEEEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHHH
T ss_pred EEEEEEecCccCCccccccccccccCccccCcccccccccccccccCCCceEEEEEEEEecCCCccccccCCHHHHHHHH
Confidence 7899999532 1121 1 35799999998863 234578888777776
Q ss_pred HH
Q psy9353 379 KV 380 (543)
Q Consensus 379 ~~ 380 (543)
.+
T Consensus 188 ~~ 189 (277)
T 1xdn_A 188 SK 189 (277)
T ss_dssp HT
T ss_pred HH
Confidence 65
No 115
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=85.79 E-value=6.6 Score=43.49 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=88.5
Q ss_pred CcEEEEcCCceEEEEEEEeCCeEEEEECCCCeeE--ec-CccCCCCCCCCcCC----CCeEEEEEEEEecc---------
Q psy9353 282 KYMVSWKADGTRYMMYIKNADEIYFTDRDFSMYK--IS-GLTFPHRKDPNKRL----TNTLLDGEMVIDRV--------- 345 (543)
Q Consensus 282 ~y~v~~K~DG~R~ll~i~~~~~vyLidR~~~~~~--v~-~~~fP~~~~~~~~~----~~tlLDGElV~d~~--------- 345 (543)
.|++++|.||.-+ |... +|. ...+|.+-..- |+ |++ ...+....+ ....+=||+++.+.
T Consensus 110 ~~~~e~KiDGlai-L~Ye-~G~-~a~TRGDG~~GedvT~n~r--tI~~iP~~l~~~p~~levRGEv~m~~~~F~~lN~~~ 184 (667)
T 1dgs_A 110 LYTVEHKVDGLSV-LYYE-EGV-WSTGSGDGEVGEEVTQNLL--TIPTIPRRLKGVPDRLEVRGEVYMPIEAFLRLNEEL 184 (667)
T ss_dssp EEEEEECCSCEEE-EEEE-TTE-EEEEECSSSEEEBCTGGGT--SSTTSCSBCSSCCSEEEEEEEEECCHHHHHHHHHHH
T ss_pred eEEEEEccceeEE-EEEc-CCC-EEEeeCCCcchhhHHHHHh--hhcCCCcccCCCCCeEEEEEEEEEEHHHHHHHHHHH
Confidence 6999999999999 5554 466 99999764321 11 111 111111111 22578999998521
Q ss_pred ---C------------C-----------cccc--EEEEEEEEE-ECCccccCCCHHHHHHHHHHhhhhhhHHHhhhhccc
Q psy9353 346 ---Q------------G-----------QNIP--RYLVYDIIR-FDNNDVTRQKFTTRIQIIKVEIIEPRHRAMENSRIN 396 (543)
Q Consensus 346 ---~------------~-----------~~~~--~ylifDil~-~~G~~v~~~p~~eR~~~L~~~i~~p~~~~~~~~~~~ 396 (543)
+ | ..++ .|++|.++. .++.. -....+++..|+++-+.-
T Consensus 185 ~~~g~~~faNpRNaaAGsLrqld~~~~a~r~L~~~~~~y~~~~~~~~~~--~~t~~e~l~~L~~~Gf~v----------- 251 (667)
T 1dgs_A 185 EERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESG--LKSQYELLLWLKEKGFPV----------- 251 (667)
T ss_dssp HHHTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCC--CCBHHHHHHHHHHTTCCC-----------
T ss_pred HhcCCCcccChHHHHHHHHHhcChhhhhhCCCCCEEEEEEeeccCCCCC--CCCHHHHHHHHHHCCCCC-----------
Confidence 1 0 2357 888887640 12211 245678888887644310
Q ss_pred cCCCCeEEEeccccchhhHhhhhc----cccccccCCceEEEeeCCCCcc-----cCCCcce-EEecCCcceeEEEEEEE
Q psy9353 397 KLAEPFSVRVKDFWSVDKAGYLLS----DKFTLCHEPDGLIFQPVDEPYV-----MGKAVDT-LKWKPHTMNSIDFLMKI 466 (543)
Q Consensus 397 ~~~~pf~i~~k~~~~~~~~~~ll~----~~~~~~h~~DGLIf~~~~spY~-----~G~~~~~-lKWKp~~~ntvDF~l~~ 466 (543)
.+..-..+ .+..+.+..+ ..-.++++.||+|+|=.+-++. ..+.+.| +=||+|...-.--++.|
T Consensus 252 ---~~~~~~~~---~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~~~T~l~~I 325 (667)
T 1dgs_A 252 ---EHCYEKAL---GAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDV 325 (667)
T ss_dssp ---CSCEEEEE---HHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECCCCCEEEEEEEE
T ss_pred ---CccceEeC---CHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCcccCCCCceEEecCCCceEEEEEEEE
Confidence 11110111 1222222222 1112899999999998765543 2234455 55555544443333333
Q ss_pred Ee-ecCCCcc
Q psy9353 467 ET-RSGLGIL 475 (543)
Q Consensus 467 ~~-~~~~g~~ 475 (543)
.. .++.|.+
T Consensus 326 ~~qVGRTG~i 335 (667)
T 1dgs_A 326 VFQVGRTGRV 335 (667)
T ss_dssp EEEECTTSBE
T ss_pred EEecCCCcee
Confidence 32 3566654
No 116
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=78.59 E-value=1.6 Score=37.69 Aligned_cols=28 Identities=7% Similarity=0.059 Sum_probs=18.7
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 119 PLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 119 ~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
++..|+|+|..| +||. .+|.+|.. .|++
T Consensus 73 ~~~~ivv~C~sG-~RS~-~aa~~L~~-~G~~ 100 (134)
T 1vee_A 73 ENTTLYILDKFD-GNSE-LVAELVAL-NGFK 100 (134)
T ss_dssp GGCEEEEECSSS-TTHH-HHHHHHHH-HTCS
T ss_pred CCCEEEEEeCCC-CcHH-HHHHHHHH-cCCc
Confidence 468899999999 5764 34444444 4663
No 117
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=72.99 E-value=2.3 Score=38.15 Aligned_cols=45 Identities=27% Similarity=0.407 Sum_probs=37.9
Q ss_pred cceeeeeeecccccccccccccccCCeeeEEeecCCCCCCCchhHh
Q psy9353 13 SVEFESKSNLTKTSRFYNKSEVEENDIAYIKIQCEGHKEAPNEKQT 58 (543)
Q Consensus 13 ~~~~~~~idlt~t~ryY~~~~i~~~G~~~~Ki~c~gr~~~p~~es~ 58 (543)
...++.||||++..++|+.+.+...|+.|.++++..+.. |..+.+
T Consensus 53 ~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~d~~~-p~~~~~ 97 (169)
T 1yn9_A 53 NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTL-PPESIV 97 (169)
T ss_dssp CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCCSSSC-CCHHHH
T ss_pred CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCCCCCC-CCHHHH
Confidence 467999999999999999999999999999999988765 444443
No 118
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=51.97 E-value=14 Score=30.21 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=19.3
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| +||. .+|.+| ...|++
T Consensus 54 ~~~~~ivv~C~~G-~rS~-~aa~~L-~~~G~~ 82 (103)
T 3iwh_A 54 NKNEIYYIVCAGG-VRSA-KVVEYL-EANGID 82 (103)
T ss_dssp CTTSEEEEECSSS-SHHH-HHHHHH-HTTTCE
T ss_pred cCCCeEEEECCCC-HHHH-HHHHHH-HHcCCC
Confidence 4578999999988 5655 334444 445763
No 119
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=50.16 E-value=15 Score=31.89 Aligned_cols=28 Identities=18% Similarity=0.185 Sum_probs=17.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..| +|+. .|+.++...|+
T Consensus 78 ~~~~~ivvyC~~G-~rS~--~aa~~L~~~G~ 105 (148)
T 2fsx_A 78 QHERPVIFLCRSG-NRSI--GAAEVATEAGI 105 (148)
T ss_dssp ---CCEEEECSSS-STHH--HHHHHHHHTTC
T ss_pred CCCCEEEEEcCCC-hhHH--HHHHHHHHcCC
Confidence 3567899999998 5764 34444444566
No 120
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=47.34 E-value=21 Score=29.14 Aligned_cols=28 Identities=25% Similarity=0.490 Sum_probs=18.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..| .|+. .|+.++...|+
T Consensus 53 ~~~~~ivvyC~~G-~rs~--~aa~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NRSA--AAVEFLSQLGL 80 (108)
T ss_dssp CTTSCEEEECSSS-HHHH--HHHHHHHTTTC
T ss_pred CCCCeEEEEcCCC-cHHH--HHHHHHHHcCC
Confidence 4568899999877 5543 34444455565
No 121
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=45.01 E-value=27 Score=29.20 Aligned_cols=29 Identities=24% Similarity=0.188 Sum_probs=19.1
Q ss_pred CCCCeEEEEcCCCCChh-HHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRT-GFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RT-G~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..| +|+ +..++..| ...|+
T Consensus 69 ~~~~~ivvyC~~g-~r~~s~~a~~~L-~~~G~ 98 (124)
T 3flh_A 69 DPAKTYVVYDWTG-GTTLGKTALLVL-LSAGF 98 (124)
T ss_dssp CTTSEEEEECSSS-SCSHHHHHHHHH-HHHTC
T ss_pred CCCCeEEEEeCCC-CchHHHHHHHHH-HHcCC
Confidence 4568999999999 465 34444444 44465
No 122
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=44.54 E-value=18 Score=29.03 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=18.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..| .|+ . .|+.++...|+
T Consensus 54 ~~~~~ivvyC~~g-~rs-~-~a~~~L~~~G~ 81 (100)
T 3foj_A 54 NDNETYYIICKAG-GRS-A-QVVQYLEQNGV 81 (100)
T ss_dssp CTTSEEEEECSSS-HHH-H-HHHHHHHTTTC
T ss_pred CCCCcEEEEcCCC-chH-H-HHHHHHHHCCC
Confidence 4568999999888 554 3 34444455565
No 123
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=44.32 E-value=24 Score=37.68 Aligned_cols=25 Identities=24% Similarity=0.369 Sum_probs=21.0
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHH
Q psy9353 119 PLEKIGVHCTHGFNRTGFLLISYLV 143 (543)
Q Consensus 119 ~~~~V~VHC~~G~~RTG~~ia~yLi 143 (543)
.+..|+|||..|..||.-+.+.-.+
T Consensus 328 ~g~sVLVhcsDGwDrT~ql~SLaql 352 (512)
T 2yf0_A 328 ENASVLVHCSDGWDRTSQVCSLGSL 352 (512)
T ss_dssp TCCCEEECTTTSSSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCccccHHHHHHHHH
Confidence 5789999999999999988776533
No 124
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=43.49 E-value=33 Score=36.75 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=20.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHH
Q psy9353 120 LEKIGVHCTHGFNRTGFLLISYLV 143 (543)
Q Consensus 120 ~~~V~VHC~~G~~RTG~~ia~yLi 143 (543)
+..|+|||..|..||..+.+.-.+
T Consensus 341 ~~sVLvhcsdGwDrT~ql~SLaql 364 (528)
T 1zsq_A 341 KTSVVVHSSDGWDRTAQLTSLAML 364 (528)
T ss_dssp CCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CceEEEECCCCccchHHHHHHHHH
Confidence 468999999999999998776633
No 125
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=39.56 E-value=18 Score=30.72 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=18.9
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| .|+.. |++++...|+.
T Consensus 84 ~~~~~ivvyC~~G-~rs~~--a~~~L~~~G~~ 112 (139)
T 2hhg_A 84 QEDKKFVFYCAGG-LRSAL--AAKTAQDMGLK 112 (139)
T ss_dssp GSSSEEEEECSSS-HHHHH--HHHHHHHHTCC
T ss_pred CCCCeEEEECCCC-hHHHH--HHHHHHHcCCC
Confidence 3568999999998 46643 34444445663
No 126
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=37.85 E-value=45 Score=36.65 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=20.2
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHH
Q psy9353 120 LEKIGVHCTHGFNRTGFLLISYLV 143 (543)
Q Consensus 120 ~~~V~VHC~~G~~RTG~~ia~yLi 143 (543)
+..|+|||..|..||..+.+.-.+
T Consensus 413 ~~sVLVhcsDGwDrT~qlsSLaQL 436 (657)
T 1lw3_A 413 KTSVVVHSSDGWDRTAQLTSLAML 436 (657)
T ss_dssp CCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CceEEEECCCCccchHHHHHHHHH
Confidence 468999999999999998776633
No 127
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=36.87 E-value=25 Score=30.16 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=18.8
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..|. |+.. ++.+| ...|+
T Consensus 80 ~~~~~ivvyC~~G~-rS~~-aa~~L-~~~G~ 107 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA-RAAL-AGKTL-REYGF 107 (137)
T ss_dssp CTTSCEEEECCSSS-CHHH-HHHHH-HHHTC
T ss_pred CCCCeEEEEcCCCc-HHHH-HHHHH-HHcCC
Confidence 45788999999985 6544 44444 44466
No 128
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=35.14 E-value=39 Score=27.00 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=18.4
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..| .|+. . |+.++...|+
T Consensus 54 ~~~~~iv~yC~~g-~rs~-~-a~~~L~~~G~ 81 (103)
T 3eme_A 54 NKNEIYYIVCAGG-VRSA-K-VVEYLEANGI 81 (103)
T ss_dssp CTTSEEEEECSSS-SHHH-H-HHHHHHTTTC
T ss_pred CCCCeEEEECCCC-hHHH-H-HHHHHHHCCC
Confidence 4568999999988 5643 3 4444455565
No 129
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=30.31 E-value=67 Score=31.65 Aligned_cols=77 Identities=8% Similarity=0.053 Sum_probs=41.6
Q ss_pred eEEecccccccCCChhhhhcCCcEEEEEEec------CCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHH
Q psy9353 63 GLWIDLTKTSRFYDKSEVEENDIAYIKIQCE------GHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGF 136 (543)
Q Consensus 63 ~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~------dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~ 136 (543)
..|||+....+.|....+. | -+++|+. ..+..|+.+.+...+.. . .-+++..|+|+|..|..|+.
T Consensus 56 ~~iiDvR~~~e~y~~gHIp--G--Ai~ip~~~~~~~~~~~~~~~~~~~~~~l~~---l-gi~~~~~vVvyc~~g~~~a~- 126 (318)
T 3hzu_A 56 LAIVESDEDVLLYDVGHIP--G--AVKIDWHTDLNDPRVRDYINGEQFAELMDR---K-GIARDDTVVIYGDKSNWWAA- 126 (318)
T ss_dssp EEEEECCSSTTSGGGCBCT--T--EEECCHHHHHBCSSSSSBCCHHHHHHHHHH---T-TCCTTCEEEEECSGGGHHHH-
T ss_pred EEEEECCCChhHHhcCcCC--C--CeEeCchhhhccCcccCCCCHHHHHHHHHH---c-CCCCCCeEEEECCCCCccHH-
Confidence 6789999654434333333 2 2344531 01134555444433322 1 12456899999998865643
Q ss_pred HHHHHHHHhCCCC
Q psy9353 137 LLISYLVEEMNFD 149 (543)
Q Consensus 137 ~ia~yLi~~~~~s 149 (543)
.++++++..|++
T Consensus 127 -~a~~~L~~~G~~ 138 (318)
T 3hzu_A 127 -YALWVFTLFGHA 138 (318)
T ss_dssp -HHHHHHHHTTCS
T ss_pred -HHHHHHHHcCCC
Confidence 355666666774
No 130
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=29.93 E-value=58 Score=24.89 Aligned_cols=29 Identities=24% Similarity=0.493 Sum_probs=18.4
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
+++..|+|+|..| .|+. .++.+| ...|++
T Consensus 39 ~~~~~ivv~C~~g-~rs~-~aa~~L-~~~G~~ 67 (85)
T 2jtq_A 39 DKNDTVKVYCNAG-RQSG-QAKEIL-SEMGYT 67 (85)
T ss_dssp CTTSEEEEEESSS-HHHH-HHHHHH-HHTTCS
T ss_pred CCCCcEEEEcCCC-chHH-HHHHHH-HHcCCC
Confidence 4678999999987 3543 344444 445663
No 131
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=29.92 E-value=52 Score=27.03 Aligned_cols=23 Identities=26% Similarity=0.264 Sum_probs=15.7
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHh
Q psy9353 121 EKIGVHCTHGFNRTGFLLISYLVEE 145 (543)
Q Consensus 121 ~~V~VHC~~G~~RTG~~ia~yLi~~ 145 (543)
..|+|+|..| .|+. .++.+|...
T Consensus 73 ~~ivv~C~~G-~rs~-~a~~~L~~~ 95 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQ-KAVKILQSL 95 (127)
T ss_dssp EEEEEECSSS-SHHH-HHHHHHHHH
T ss_pred CeEEEEcCCC-CcHH-HHHHHHHHh
Confidence 4899999988 4544 455555554
No 132
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=28.80 E-value=46 Score=31.65 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=19.1
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|||..| .|+. .++..| ...|++
T Consensus 221 ~~~~~ivvyC~~G-~rs~-~a~~~L-~~~G~~ 249 (271)
T 1e0c_A 221 TPDKEIVTHCQTH-HRSG-LTYLIA-KALGYP 249 (271)
T ss_dssp CTTSEEEEECSSS-SHHH-HHHHHH-HHTTCS
T ss_pred CCCCCEEEECCch-HHHH-HHHHHH-HHcCCC
Confidence 4678999999998 4654 334444 455763
No 133
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=28.39 E-value=1e+02 Score=24.68 Aligned_cols=28 Identities=21% Similarity=0.318 Sum_probs=18.0
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~ 148 (543)
.++..|+|+|..|. |+. .++..|.. .|+
T Consensus 56 ~~~~~ivvyc~~g~-rs~-~a~~~L~~-~G~ 83 (108)
T 1gmx_A 56 DFDTPVMVMCYHGN-SSK-GAAQYLLQ-QGY 83 (108)
T ss_dssp CTTSCEEEECSSSS-HHH-HHHHHHHH-HTC
T ss_pred CCCCCEEEEcCCCc-hHH-HHHHHHHH-cCC
Confidence 45688999999984 543 34444444 466
No 134
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*
Probab=28.28 E-value=27 Score=34.04 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=36.9
Q ss_pred CCcEEEEEEecC-----CCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCC
Q psy9353 83 NDIAYIKIQCEG-----HKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFN 132 (543)
Q Consensus 83 ~gi~y~~ip~~d-----hg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~ 132 (543)
.||+|+-+.+.+ |+..+....+..++..|.+|++++|++.|.+.+++..+
T Consensus 56 ~GvR~ldlr~~~~~~~~H~~~~~~~~~~~~L~~i~~fL~~~P~EvVil~~~~~~~ 110 (274)
T 2plc_A 56 AGIRYIDIRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQN 110 (274)
T ss_dssp TTCCEEEEEECTTSEEEETTEEEEEEHHHHHHHHHHHHHHSTTCCEEEEEEETTC
T ss_pred hCCcEEEEEECCcEEEEEcCCCCCCCHHHHHHHHHHHHHhCCCceEEEEEEeCCC
Confidence 477776655421 34333334578899999999999999999999998654
No 135
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=27.85 E-value=59 Score=26.35 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=18.4
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| .|+. .++ +++...|+.
T Consensus 54 ~~~~~ivvyC~~G-~rs~-~aa-~~L~~~G~~ 82 (110)
T 2k0z_A 54 HKDKKVLLHCRAG-RRAL-DAA-KSMHELGYT 82 (110)
T ss_dssp CSSSCEEEECSSS-HHHH-HHH-HHHHHTTCC
T ss_pred CCCCEEEEEeCCC-chHH-HHH-HHHHHCCCC
Confidence 4678899999888 4543 334 444445653
No 136
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=27.25 E-value=52 Score=31.54 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=18.6
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHH-hCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVE-EMNF 148 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~-~~~~ 148 (543)
+++..|+|+|..|. |+ .. +++++. ..|+
T Consensus 231 ~~~~~ivvyC~~G~-rs-~~-a~~~L~~~~G~ 259 (285)
T 1uar_A 231 TKDKDIVVYCRIAE-RS-SH-SWFVLKYLLGY 259 (285)
T ss_dssp CTTSEEEEECSSHH-HH-HH-HHHHHHTTSCC
T ss_pred CCCCCEEEECCchH-HH-HH-HHHHHHHHcCC
Confidence 45789999998884 54 33 444444 5676
No 137
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=27.16 E-value=38 Score=27.35 Aligned_cols=29 Identities=14% Similarity=0.076 Sum_probs=18.3
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| +| +.. |++++...|++
T Consensus 50 ~~~~~ivvyc~~g-~r-s~~-a~~~L~~~G~~ 78 (106)
T 3hix_A 50 EKSRDIYVYGAGD-EQ-TSQ-AVNLLRSAGFE 78 (106)
T ss_dssp CTTSCEEEECSSH-HH-HHH-HHHHHHHTTCS
T ss_pred CCCCeEEEEECCC-Ch-HHH-HHHHHHHcCCc
Confidence 3567899999987 45 333 44444555764
No 138
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=25.18 E-value=56 Score=31.67 Aligned_cols=72 Identities=18% Similarity=0.163 Sum_probs=39.2
Q ss_pred ccceEEecccccccCCChhhhhcCCcEEEEEEecCCCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHH
Q psy9353 60 LKIGLWIDLTKTSRFYDKSEVEENDIAYIKIQCEGHKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLI 139 (543)
Q Consensus 60 ~~i~~VIdLt~~~~~y~~~~~~~~gi~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia 139 (543)
..=..|||+.+..+ +.. -.++|--..|. ..+..|...+.+.+...++..|+|+|+.| .|+ ..++
T Consensus 135 ~~~~vlIDVR~~~E------y~~-------GHIpGAiniP~-~~~~~~~~~l~~~l~~~kdk~IVvyC~~G-~RS-~~Aa 198 (265)
T 4f67_A 135 DPNVILLDTRNDYE------YEL-------GTFKNAINPDI-ENFREFPDYVQRNLIDKKDKKIAMFCTGG-IRC-EKTT 198 (265)
T ss_dssp CTTSEEEECSCHHH------HHH-------EEETTCBCCCC-SSGGGHHHHHHHHTGGGTTSCEEEECSSS-HHH-HHHH
T ss_pred CCCeEEEEeCCchH------hhc-------CcCCCCEeCCH-HHHHhhHHHHHHhhhhCCCCeEEEEeCCC-hHH-HHHH
Confidence 34467899886433 321 11223222332 23444555555555556678999999977 344 4555
Q ss_pred HHHHHhCCC
Q psy9353 140 SYLVEEMNF 148 (543)
Q Consensus 140 ~yLi~~~~~ 148 (543)
.+|... |+
T Consensus 199 ~~L~~~-Gf 206 (265)
T 4f67_A 199 AYMKEL-GF 206 (265)
T ss_dssp HHHHHH-TC
T ss_pred HHHHHc-CC
Confidence 556553 65
No 139
>2ns5_A Partitioning-defective 3 homolog; cell polarity, N-terminal domain, PB1 domain, asymmetric membrane localization, signaling protein; NMR {Rattus norvegicus}
Probab=24.86 E-value=1.5e+02 Score=23.64 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=23.6
Q ss_pred cEEEEEEecCCCCCCChHHHHHHHHHHHHHHhh---CCCCeEEEE---cCCC
Q psy9353 85 IAYIKIQCEGHKEAPNEKQTRVFINLCSKFISK---SPLEKIGVH---CTHG 130 (543)
Q Consensus 85 i~y~~ip~~dhg~~P~~e~i~~f~~~v~~fl~~---~~~~~V~VH---C~~G 130 (543)
-.++-+||.++ ..--...+. +.+..+.+. +++..|.|| |+.|
T Consensus 11 ~~~vvVPC~dg-~~tV~~L~~---~A~~RY~K~~~k~~~~~v~V~~l~~~~g 58 (85)
T 2ns5_A 11 RTRVDVPCGDG-RMKVFSLIQ---QAVTRYRKAVAKDPNYWIQVHRLEHGDG 58 (85)
T ss_dssp TEEEEEEESSS-CCCHHHHHH---HHHHHHHHHTTCCTTSCEEEEEEECSSS
T ss_pred CEEEEEECCCC-cccHHHHHH---HHHHHHHHhcCCCCCcEEEEEEEEeCCC
Confidence 35778999873 222222222 344444433 356689999 8655
No 140
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=24.17 E-value=31 Score=34.31 Aligned_cols=50 Identities=14% Similarity=0.279 Sum_probs=35.4
Q ss_pred CCcEEEEEEec---C------CCCCCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCC
Q psy9353 83 NDIAYIKIQCE---G------HKEAPNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFN 132 (543)
Q Consensus 83 ~gi~y~~ip~~---d------hg~~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~ 132 (543)
.||+|+-+.+. + |+.......+..++..|.+|++++|+++|.+.|++-.+
T Consensus 57 ~GVR~lDlRv~~~~~~~l~~~Hg~~~~~~~l~dvL~~i~~FL~~hP~EvVil~l~~e~~ 115 (306)
T 3v1h_A 57 SGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYD 115 (306)
T ss_dssp TTCCEEEEEEEEEETTEEEEEETTEEEEEEHHHHHHHHHHHHHHSTTCCEEEEEEECSC
T ss_pred hCcceEEEEeeecCCCcEEEEccCcccCCcHHHHHHHHHHHHHHCCCeEEEEEEEeCCC
Confidence 46666655442 1 33333334567889999999999999999999997643
No 141
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=23.95 E-value=48 Score=28.49 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=18.7
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| .|+. . |++++...|++
T Consensus 54 ~~~~~ivvyC~~g-~rs~-~-aa~~L~~~G~~ 82 (141)
T 3ilm_A 54 EKSRDIYVYGAGD-EQTS-Q-AVNLLRSAGFE 82 (141)
T ss_dssp CTTSEEEEECSSH-HHHH-H-HHHHHHHTTCC
T ss_pred CCCCeEEEEECCC-hHHH-H-HHHHHHHcCCC
Confidence 3568899999987 5554 3 34444555763
No 142
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=22.98 E-value=1.3e+02 Score=28.47 Aligned_cols=46 Identities=15% Similarity=0.220 Sum_probs=27.0
Q ss_pred CCChHHHHHHHHHHHHHHhhCCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 98 APNEKQTRVFINLCSKFISKSPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 98 ~P~~e~i~~f~~~v~~fl~~~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.|+.+.+.+++. ++ .-+++..|+|+|..|..|+. .|++++...|+.
T Consensus 63 ~~~~~~~~~~~~---~~-gi~~~~~vvvyc~~g~~~s~--~a~~~L~~~G~~ 108 (271)
T 1e0c_A 63 QPPREQLESLFG---EL-GHRPEAVYVVYDDEGGGWAG--RFIWLLDVIGQQ 108 (271)
T ss_dssp CCCHHHHHHHHH---HH-TCCTTCEEEEECSSSSHHHH--HHHHHHHHTTCC
T ss_pred CCCHHHHHHHHH---Hc-CCCCCCeEEEEcCCCCccHH--HHHHHHHHcCCC
Confidence 455555444433 22 12456899999999855665 344555556763
No 143
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=22.35 E-value=89 Score=26.26 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=18.5
Q ss_pred CCCCeEEEEcCCCCChhHHHHHHHHHHhCCCC
Q psy9353 118 SPLEKIGVHCTHGFNRTGFLLISYLVEEMNFD 149 (543)
Q Consensus 118 ~~~~~V~VHC~~G~~RTG~~ia~yLi~~~~~s 149 (543)
.++..|+|+|..| .|+ ..++.+|. ..|+.
T Consensus 89 ~~~~~ivvyC~~G-~rs-~~aa~~L~-~~G~~ 117 (139)
T 3d1p_A 89 DSAKELIFYCASG-KRG-GEAQKVAS-SHGYS 117 (139)
T ss_dssp CTTSEEEEECSSS-HHH-HHHHHHHH-TTTCC
T ss_pred CCCCeEEEECCCC-chH-HHHHHHHH-HcCCC
Confidence 3568999999997 344 34444444 45663
No 144
>2rpq_B Activating transcription factor 7-interacting protein 1; SUMO, SIM, nucleus, UBL conjugation, UBL conjugation pathway, activator; NMR {Homo sapiens}
Probab=20.69 E-value=29 Score=24.24 Aligned_cols=22 Identities=23% Similarity=0.261 Sum_probs=19.2
Q ss_pred CCCCCCCcccccceeeeeeecc
Q psy9353 2 EESSSLSDESTSVEFESKSNLT 23 (543)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~idlt 23 (543)
.|+++-|-++.+.+-|=|||||
T Consensus 17 aesttqs~katg~dsgGVIDLT 38 (49)
T 2rpq_B 17 ADSTSQCGKATGSDSSGVIDLT 38 (49)
T ss_pred ccCcchhheeecCCCCceEEee
Confidence 3677888889999999999999
Done!