BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9357
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V6X7|OFUT1_DROME GDP-fucose protein O-fucosyltransferase 1 OS=Drosophila
melanogaster GN=O-fut1 PE=1 SV=1
Length = 402
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 85/127 (66%), Gaps = 9/127 (7%)
Query: 5 APQCLGYRNEYGVATEELCFPSVETVVRQLKRVVRE------HGQIKYIFVATDNNNLNE 58
+PQCLGY+NE G ELC PS E ++RQLKR ++ +IK +FVA+D+N++
Sbjct: 266 SPQCLGYKNERGALYPELCMPSKEAIIRQLKRTIKNVRQTQPDNEIKSVFVASDSNHMIG 325
Query: 59 PLKEAFKRTEIRI--VPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSF 116
L A R I + +P D P++DLAIL Q+NHFIGNCISS++AF KR RDV G PS F
Sbjct: 326 ELNTALSRMGISVHKLPED-DPYLDLAILGQSNHFIGNCISSYSAFEKRERDVHGFPSYF 384
Query: 117 WAFPIKK 123
W FP +K
Sbjct: 385 WGFPKEK 391
>sp|Q6EV69|OFUT1_PANTR GDP-fucose protein O-fucosyltransferase 1 OS=Pan troglodytes
GN=POFUT1 PE=2 SV=1
Length = 388
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 5/129 (3%)
Query: 5 APQCLGY-RNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEA 63
+PQC+GY R+ T +C P ++ + R +K VR + ++VATD+ + L++
Sbjct: 264 SPQCVGYSRSTAAPLTMTMCLPDLKEIQRAVKLWVRSL-DAQSVYVATDSESYVPELQQL 322
Query: 64 FKRTEIRIVPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSFWAFPIKK 123
FK + + VDL IL QA+HFIGNC+SSFTAFVKR RD++G PSSF+
Sbjct: 323 FKGKVKVVSLKPEVAQVDLYILGQADHFIGNCVSSFTAFVKRERDLQGRPSSFFGM---D 379
Query: 124 TAQKVKDEL 132
K++DE
Sbjct: 380 RPPKLRDEF 388
>sp|Q9H488|OFUT1_HUMAN GDP-fucose protein O-fucosyltransferase 1 OS=Homo sapiens GN=POFUT1
PE=1 SV=1
Length = 388
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 5/129 (3%)
Query: 5 APQCLGY-RNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEA 63
+PQC+GY R+ T +C P ++ + R +K VR + ++VATD+ + L++
Sbjct: 264 SPQCVGYSRSTAAPLTMTMCLPDLKEIQRAVKLWVRSL-DAQSVYVATDSESYVPELQQL 322
Query: 64 FKRTEIRIVPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSFWAFPIKK 123
FK + + VDL IL QA+HFIGNC+SSFTAFVKR RD++G PSSF+
Sbjct: 323 FKGKVKVVSLKPEVAQVDLYILGQADHFIGNCVSSFTAFVKRERDLQGRPSSFFGM---D 379
Query: 124 TAQKVKDEL 132
K++DE
Sbjct: 380 RPPKLRDEF 388
>sp|Q6EV70|OFUT1_RAT GDP-fucose protein O-fucosyltransferase 1 OS=Rattus norvegicus
GN=Pofut1 PE=2 SV=1
Length = 395
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 5 APQCLGY-RNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEA 63
+PQC+GY R+ T +C P ++ + R +K VR + +++ATD+ + +++
Sbjct: 271 SPQCVGYSRSTATPLTTTMCLPDLKEIQRAVKLWVRAL-DARSVYIATDSESYVSEIQQL 329
Query: 64 FKRTEIRIVPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSFWAFPIKK 123
FK + + +DL IL QA+HFIGNC+SSFTAFVKR RD+ G PSSF F + +
Sbjct: 330 FKEKVKVVSLKPEVAQIDLYILGQADHFIGNCVSSFTAFVKRERDLHGRPSSF--FGMDR 387
Query: 124 TAQKVKDEL 132
+Q ++DE
Sbjct: 388 PSQ-LRDEF 395
>sp|P83337|OFUT1_CRIGR GDP-fucose protein O-fucosyltransferase 1 OS=Cricetulus griseus
GN=POFUT1 PE=1 SV=2
Length = 392
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 5 APQCLGY-RNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEA 63
+PQC+GY R+ T +C P + + R +K VR + I++ATD+ + +++
Sbjct: 268 SPQCVGYSRSTATPLTMTMCLPDLNEIQRAVKLWVRAL-NARSIYIATDSESYVPEIQQL 326
Query: 64 FKRTEIRIVPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSFWAFPIKK 123
FK + + VDL IL QA+HFIGNC+SSFTAFVKR RD+ G SSF F + +
Sbjct: 327 FKEKVKVVSLKPEVAQVDLYILGQADHFIGNCVSSFTAFVKRERDLHGRQSSF--FGMDR 384
Query: 124 TAQKVKDEL 132
+Q +DE
Sbjct: 385 PSQP-RDEF 392
>sp|Q91ZW2|OFUT1_MOUSE GDP-fucose protein O-fucosyltransferase 1 OS=Mus musculus GN=Pofut1
PE=1 SV=1
Length = 393
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
Query: 5 APQCLGY-RNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEA 63
+PQC+GY R+ T +C P ++ + R + VR + +++ATD+ + +++
Sbjct: 269 SPQCVGYSRSTATPLTMTMCLPDLKEIQRAVTLWVRAL-NARSVYIATDSESYVSEIQQL 327
Query: 64 FKRTEIRIVP-SDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLPSSFWAFPIK 122
FK ++R+V + +DL IL QA+HFIGNC+SSFTAFVKR RD+ G SSF F +
Sbjct: 328 FK-DKVRVVSLKPEVAQIDLYILGQADHFIGNCVSSFTAFVKRERDLHGRQSSF--FGMD 384
Query: 123 KTAQKVKDEL 132
+ +Q ++DE
Sbjct: 385 RPSQ-LRDEF 393
>sp|Q18014|OFUT1_CAEEL GDP-fucose protein O-fucosyltransferase 1 OS=Caenorhabditis elegans
GN=C15C7.7 PE=1 SV=5
Length = 389
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
Query: 3 TNAP-----QCLGYRNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLN 57
TN P QCLG + G T+E+C PS + ++ Q+ V G K +FVA+D +++
Sbjct: 256 TNRPLFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGA-KSVFVASDKDHMI 314
Query: 58 EPLKEAFKRTEI---RIVPSDQSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKG--- 111
+ + EA K EI R P D + LAI+ +A+ F+GNC+S+F+ VKR RD G
Sbjct: 315 DEINEALKPYEIEAHRQEPDDM--YTSLAIMGRADLFVGNCVSTFSHIVKRERDHAGQSP 372
Query: 112 LPSSFWA 118
PS+F+
Sbjct: 373 RPSAFFG 379
>sp|Q8VHI3|OFUT2_MOUSE GDP-fucose protein O-fucosyltransferase 2 OS=Mus musculus GN=Pofut2
PE=1 SV=1
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 25 PSVETVVRQLKRVVREHGQIKYIFVATD-----NNNLNEPLKEAFK----RTEIRIVPSD 75
PS+E V++++ +++ H Q+ +FVATD L + L E + E+ +
Sbjct: 307 PSLEGAVKKIRSLMKTH-QLDKVFVATDAIRKEQEELRKLLPEMVRFEPTWEELELYKDG 365
Query: 76 QSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGL 112
+D I + A FIG +S+F+ + R++ GL
Sbjct: 366 GVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGL 402
>sp|Q6EV56|OFUT2_PANTR GDP-fucose protein O-fucosyltransferase 2 OS=Pan troglodytes
GN=POFUT2 PE=2 SV=1
Length = 429
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 25 PSVETVVRQLKRVVREHGQIKYIFVATDN-----NNLNEPLKEAFK----RTEIRIVPSD 75
PS+E VR+++ +++ H ++ +FVATD L + L E + E+ +
Sbjct: 307 PSLEGAVRKIRSLMKTH-RLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDG 365
Query: 76 QSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGL 112
+D I + A FIG +S+F+ + R++ GL
Sbjct: 366 GVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGL 402
>sp|Q9Y2G5|OFUT2_HUMAN GDP-fucose protein O-fucosyltransferase 2 OS=Homo sapiens GN=POFUT2
PE=1 SV=3
Length = 429
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 25 PSVETVVRQLKRVVREHGQIKYIFVATDN-----NNLNEPLKEAFK----RTEIRIVPSD 75
PS+E VR+++ +++ H ++ +FVATD L + L E + E+ +
Sbjct: 307 PSLEGAVRKIRSLMKTH-RLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDG 365
Query: 76 QSPHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGL 112
+D I + A FIG +S+F+ + R++ GL
Sbjct: 366 GVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGL 402
>sp|Q8WR51|OFUT2_CAEEL GDP-fucose protein O-fucosyltransferase 2 OS=Caenorhabditis elegans
GN=pad-2 PE=1 SV=1
Length = 424
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 44 IKYIFVATDNNN---------LNEPLKEAFKRTEIRIVPSDQSPHVDLAILSQANHFIGN 94
++ I++ATD + LN L E ++ T+ + + Q +D + + A +FIG+
Sbjct: 321 LQKIYLATDAPDQEVDELKALLNGEL-EVYRFTDTQKLNDGQIAIIDQYLCAHAAYFIGS 379
Query: 95 CISSFTAFVKRHRDVKGLPSS 115
S+FT ++ R++ G P S
Sbjct: 380 YESTFTFRIQEDREIIGFPIS 400
>sp|A9NB44|HTPG_COXBR Chaperone protein HtpG OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=htpG PE=3 SV=1
Length = 633
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 34 LKRVVREHGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHVDLAILSQANHFIG 93
+ R+ E +I YI T + N PL E F++ +I ++ S VD +++ N F G
Sbjct: 428 ISRMKPEQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLL--MSDRVDEWLVAHLNEFEG 485
Query: 94 NCISSFT 100
+ S
Sbjct: 486 KSLQSIA 492
>sp|Q83EL0|HTPG_COXBU Chaperone protein HtpG OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=htpG PE=1 SV=1
Length = 633
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 34 LKRVVREHGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHVDLAILSQANHFIG 93
+ R+ E +I YI T + N PL E F++ +I ++ S VD +++ N F G
Sbjct: 428 ISRMKPEQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLL--MSDRVDEWLVAHLNEFEG 485
Query: 94 NCISSFT 100
+ S
Sbjct: 486 KSLQSIA 492
>sp|A9KGQ8|HTPG_COXBN Chaperone protein HtpG OS=Coxiella burnetii (strain Dugway
5J108-111) GN=htpG PE=3 SV=1
Length = 633
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 34 LKRVVREHGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHVDLAILSQANHFIG 93
+ R+ E +I YI T + N PL E F++ +I ++ S VD +++ N F G
Sbjct: 428 ISRMKPEQNRIYYIVADTYTSAKNSPLLEVFRKKDIEVLL--MSDRVDEWLVAHLNEFEG 485
Query: 94 NCISSFT 100
+ S
Sbjct: 486 KSLQSIA 492
>sp|O80722|PME4_ARATH Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1
Length = 588
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 11 YRNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLNEPLKEAFKRTEIR 70
YRN T + F TV++ VVR+ + +Y V D N L +K R
Sbjct: 417 YRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCR 476
Query: 71 IVP 73
IVP
Sbjct: 477 IVP 479
>sp|Q8Q0Q0|TRM56_METMA tRNA (cytidine(56)-2'-O)-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0086 PE=3 SV=1
Length = 177
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 41 HGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHV 80
H ++ + + D EPL++ F E+ IVP+++ HV
Sbjct: 132 HSEVAAVAITMDRIAEGEPLEKEFPGAELTIVPAERGKHV 171
>sp|Q9W589|OFUT2_DROME GDP-fucose protein O-fucosyltransferase 2 OS=Drosophila
melanogaster GN=O-fut2 PE=1 SV=1
Length = 490
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 8 CLGYRNEYGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNN--NLNEPLKEAFK 65
C R V + + P+++ +Q+K+++R + +F+ATD L E LKE F
Sbjct: 334 CAHLRRGDFVRSRDATTPTLKAAAQQVKQLLRGF-NMTTVFLATDATPYELME-LKELFY 391
Query: 66 RTE-IRIVPSDQSPH----------VDLAILSQANHFIGNCISSFTAFVKRHRDVKGL-- 112
R + P VD + + A +F+G S+FT + R++ G
Sbjct: 392 RFRLVHFAPESNVQRRELKDGGVAVVDQLVCAYARYFVGTYESTFTYRIYEEREILGFTQ 451
Query: 113 PSSFWAF 119
S+F F
Sbjct: 452 ASTFNTF 458
>sp|Q8TL02|TRM56_METAC tRNA (cytidine(56)-2'-O)-methyltransferase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_3241 PE=3 SV=1
Length = 177
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 41 HGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHV 80
H ++ + + D EPL++ F E+ IVP+++ HV
Sbjct: 132 HSEVAAVAITMDRIAEGEPLEKEFPGAELTIVPAERGKHV 171
>sp|Q8ZAE3|WECB_YERPE UDP-N-acetylglucosamine 2-epimerase OS=Yersinia pestis GN=wecB PE=3
SV=1
Length = 376
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 1 METNAPQCL--GYRNE-YGVATEELCFPSVETVVRQLKRVVREHGQIKYIFVATDNNNLN 57
++TN L G+R E +G E +C L + R+H +++ ++ N N++
Sbjct: 201 LDTNKKMILVTGHRRESFGGGFERIC--------SALAEIARKHPEVQVVYPVHLNPNVS 252
Query: 58 EPLKEAFKRTE--IRIVPSDQSPHVDL 82
EP+ K + I I P D P V L
Sbjct: 253 EPVNRILKGIDNIILIDPQDYLPFVYL 279
>sp|Q6LZP0|SYV_METMP Valine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=valS PE=3 SV=1
Length = 886
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 78 PHVDLAILSQANHFIGNCISSFTAFVKRHRDVKGLP 113
P D ++S N F+G + + A ++R++ KG+P
Sbjct: 718 PVSDERLISLENEFVGEVVKNTVASIRRYKSNKGMP 753
>sp|Q466X1|TRM56_METBF tRNA (cytidine(56)-2'-O)-methyltransferase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A3187 PE=3
SV=1
Length = 177
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 41 HGQIKYIFVATDNNNLNEPLKEAFKRTEIRIVPSDQSPHV 80
H ++ + + D EPLK F+ E+ IVP+++ V
Sbjct: 132 HSEVAAVAITLDRIADGEPLKREFQNAELTIVPAERGKQV 171
>sp|Q4UMX2|SYM_RICFE Methionine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=metG PE=3 SV=1
Length = 512
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 84 ILSQANHFIGNCISSFTAFVKRHRD------VKGLPSSFWAFPIKKTAQKVKDE 131
I S+ ++ IGN + TAFV ++ D ++G+ + PI KTA K ++
Sbjct: 343 INSELSNKIGNLLQRTTAFVYKNNDGKVPLLMQGIIDKIYELPILKTASKFAEQ 396
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,888,246
Number of Sequences: 539616
Number of extensions: 1669371
Number of successful extensions: 4337
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4320
Number of HSP's gapped (non-prelim): 25
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)