BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9363
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5U378|TBCE_DANRE Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2
Length = 521
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 132/295 (44%), Gaps = 68/295 (23%)
Query: 180 VMEDDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHS 239
++++ +G RVC +G RGT+RYVG V T GVW G++WD RGKHDGSH+GV+YF
Sbjct: 2 MLDEAVGRRVC-CDGERGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRH 60
Query: 240 TTSGSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVH 299
T GSF+R K +FG ++ AL ++Y E+T EE+K I++ + +VGF+ V
Sbjct: 61 PTGGSFVRPQKASFGVDYVTALKQRYEVEIEEVT----AEEMK--ISSKTVVMVGFENVK 114
Query: 300 EEQNTNKL------------PIPN-------------DTSG-----------VMEQIFPQ 323
++Q+ L P P D SG + EQ+
Sbjct: 115 KKQSVKNLTEVGLRRCEVSAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSL 174
Query: 324 GHIH-----------------------TLTLGNMGYIWADILKLLANF-PVTCLKLPSNR 359
+H L++ + W +L + V L L N
Sbjct: 175 QELHLSHNRLSISSAPSSLSSAFSHLRVLSINSCALTWTQVLHCAPMWQQVEELYLADNN 234
Query: 360 ITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLN 414
IT L + +L L L N I V + LP L+ LNL+ST+L IK +
Sbjct: 235 ITELLRPEHVLQALTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKFS 288
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLRI----RLKSSSAPAHSYLAEVVFFVHLGRT 80
LDLS N +A V EI+ L L LNL +K S PA + F L
Sbjct: 251 LDLSNNQIAQ-ETVLEIS-HLPRLERLNLSSTSLSEIKFSDVPAGK---KTTLFPALKEL 305
Query: 81 LCDEDFVKEGSLLHYLPKLSSLRFT---KNPILAEER-VVSSREKTIARLGGLKLLNGSA 136
L D++ + E +++ L KL SL + +NP+L +E+ + ++R+ IARLG L+LL+
Sbjct: 306 LLDDNNISEWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQIMIARLGQLELLDMRQ 365
Query: 137 IERQERQGSEYDYIKEFGAVWLDEKRRAEFLEANP 171
I ER+G+E DY K FG+ WL E + NP
Sbjct: 366 ILSDERRGAELDYCKMFGSAWLRAGGHREAEKNNP 400
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 7 NAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
+A +EI PF++ LDLS NLL+SW + IT QL L+ L+L
Sbjct: 133 SAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQELHL 179
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Query: 355 LPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLN 414
+P+ + TTL F +L+EL L +NNI +W VN L LP+L YL+ RN L+
Sbjct: 290 VPAGKKTTL------FPALKELLLDDNNISEWRVVNELEKLPSLVYLSCR----RNPLLH 339
Query: 415 KE 416
KE
Sbjct: 340 KE 341
>sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1
Length = 527
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 124/295 (42%), Gaps = 64/295 (21%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R +K+NFG+ F+ A+ +YV D E+ +E +I +E +GFD + ++Q
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGP---EEDRKEQIVTIGNKPVETIGFDSIMKQQ 123
Query: 303 N-----------TNKLPIPNDTSGVMEQI------------------------------- 320
+ + + GV E
Sbjct: 124 SQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEV 183
Query: 321 ---------FPQGHIHT--------LTLGNMGYIWADILKLLANFP-VTCLKLPSNRITT 362
FP G + T L L G WA++L+ +A P + L L SN I
Sbjct: 184 LNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIFI 243
Query: 363 LDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKEG 417
+ + +++ L L N ++D ++ + LP L+ L L+ T + ++ G
Sbjct: 244 SERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAG 298
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 93 LHYLPKLSSLRFTKNPILAEERVV-SSREKTIARLGGLKLLNGSAIERQERQGSEYDYIK 151
L LP L +L +NP+ E++ ++R IA +G LK LN I +ER+ +E DY K
Sbjct: 328 LEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILPEERRRAELDYRK 387
Query: 152 EFGAVWLD-------EKRR--AEFLEANPR 172
FG W EK R EFL A+PR
Sbjct: 388 AFGNEWKQAGGHKDPEKNRLSEEFLTAHPR 417
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
VS AG+ + +A P I +DLS+NLL+SW V I QL+HL LN+
Sbjct: 139 VSCAGEKGG-VAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNV 186
>sp|Q5RBD9|TBCE_PONAB Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1
Length = 527
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 117/248 (47%), Gaps = 36/248 (14%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGQRV-EVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R +K+NFG+ F+ A+ +YV D E+ +E +I +E +GFD + ++Q
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGP---EEDRKEQIVTIGNKPVETIGFDSIMKQQ 123
Query: 303 N-----------TNKLPIPNDTSGVMEQIFPQGHIHTLTLG-NMGYIWADILKL------ 344
+ + + GV E +I + L N+ W +++ +
Sbjct: 124 SQLSKLQEVSLRNCAVSCAGEKGGVAEGC---PNIRKVDLSKNLLSSWDEVIHIADQLRH 180
Query: 345 --LANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEV--NALGSLPNLKY 400
+ N LK PS + T G S+L+ L L + I W EV A+G P L+
Sbjct: 181 LEVLNVSENKLKFPSGSVLT-----GTLSALKVLVLNQTGIT-WAEVLRCAMGC-PGLEE 233
Query: 401 LNLASTNL 408
L L S N+
Sbjct: 234 LYLESNNI 241
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + I L L L L I + S P + F L + +
Sbjct: 257 LDLSSNQLIDENQLYLIA-HLPRLEQLILSDIGISSLHFPDAGIGCKTSLFPSLKYLVVN 315
Query: 84 EDFVKEGSLLHYLPKLSSLR---FTKNPILAEERVV-SSREKTIARLGGLKLLNGSAIER 139
++ + + S + L KL SLR +NP+ E++ ++R IA +G LK LN I
Sbjct: 316 DNQISQWSFFNELDKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILP 375
Query: 140 QERQGSEYDYIKEFGAVW--------LDEKRRA-EFLEANPR 172
+ER+ +E DY K FG W D+ R + EFL A+PR
Sbjct: 376 EERRRAELDYRKAFGNEWKQAGGHKDPDKNRLSEEFLTAHPR 417
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
VS AG+ + + P I +DLS+NLL+SW V I QL+HL LN+
Sbjct: 139 VSCAGEKGG-VAEGCPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNV 186
>sp|Q55CN0|TBCE_DICDI Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce
PE=3 SV=1
Length = 525
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 134/261 (51%), Gaps = 37/261 (14%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
IG RV +G GTIRY G V+G +G WYGI+WD RGKH G+ G +YF + SGS
Sbjct: 15 IGERVKGDDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCINKGSGS 74
Query: 245 FMRRDKLNFGSSFMEALHRKY---VETDNELTVRENVEEVKASINAPFLELVGFDQVHEE 301
FM+ +KL G +FM+++ K+ ++ ++L V E++K I +++G +Q E
Sbjct: 75 FMKYEKLIKGETFMKSISDKFHQKIDNYDDLYVDSTKEDIKIQI-----QMIGMNQTREN 129
Query: 302 Q---------NTNKLPIPN-DTSGVMEQIFPQGHIHTLTLGN-MGYIWADILKLLANFP- 349
Q + + LPI D S ++ F ++ L L N + W I+KLL P
Sbjct: 130 QKKFIAQTLLSASYLPISEIDESPLIYNNFK--NLIELNLSNCLLNSWTQIVKLLKQLPN 187
Query: 350 VTCLKLPSNRIT-TLDSVPGMFSS------------LEELYLQENNIVDWGEVNALGS-- 394
+ L L +NR++ +D +S +++L L +N+ +W V+++
Sbjct: 188 LNRLHLCNNRLSFNIDEFKKEVNSNNEYGNSIDDCNVKDLILVNSNLSNWSIVSSICKYL 247
Query: 395 LPNLKYLNLASTNLRNIKLNK 415
N++ + L+S ++ NI L K
Sbjct: 248 FKNIESICLSSNSIENINLFK 268
>sp|Q5U508|TBCE_XENLA Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1
Length = 522
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 117/234 (50%), Gaps = 25/234 (10%)
Query: 189 VCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRR 248
+CD G T+RYVG+V T G+W G++WD+ RGKH+G+H G KYF T GSF+R
Sbjct: 15 ICD--GEYATVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFIRL 72
Query: 249 DKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQNT-NKL 307
K NFG F+ AL ++Y L +N E V I +ELVGF+ + EEQ+ NKL
Sbjct: 73 KKANFGVDFLAALRKRY-----GLKSEQNEELV---IGKKTVELVGFESIQEEQSKLNKL 124
Query: 308 P------IPNDTSGVMEQIFPQG-HIHTLTLG-NMGYIWADILKLLANFP-VTCLKLPSN 358
+G QI +I T L N+ W + + + +T L L N
Sbjct: 125 KDVSLRECAVSNAGEKGQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSEN 184
Query: 359 RI---TTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSL-PNLKYLNLASTNL 408
++ + S+ F +L+ L L + W E+ S+ P L+ L+L S ++
Sbjct: 185 KLNPSSNPSSLATSFCNLKVLSLNRTGM-KWNEILQCASMWPALEELHLVSNDI 237
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 93 LHYLPKLSSLRFTKNPIL-AEERVVSSREKTIARLGGLKLLNGSAIERQERQGSEYDYIK 151
LH L L SL NP++ ++ + R+ IA++ LK LN + I ER+G+E DY K
Sbjct: 323 LHKLLHLESLNCHGNPLMDLDKNPETVRQLIIAKIENLKFLNKTEIFPTERRGAELDYRK 382
Query: 152 EFGAVWLD---------EKRRAEFLEANPR 172
FG WL K +FL+ +PR
Sbjct: 383 MFGNEWLKAGGSQNEEFNKPSRDFLQDHPR 412
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 2 DSRVSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL-RIRLKSS 60
+ VSNAG+ +I + P I DLS+NL +SW ++ I+ QL++L L+L +L S
Sbjct: 131 ECAVSNAGE-KGQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSENKLNPS 189
Query: 61 SAPAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYL---PKLSSLRFTKNPI-LAEERVV 116
S P S LA F +L + +K +L P L L N I L E+ V
Sbjct: 190 SNP--SSLA--TSFCNLKVLSLNRTGMKWNEILQCASMWPALEELHLVSNDISLLEQPVN 245
Query: 117 SSREKTIARLGGLKLLNGSAI 137
+ + TI + K+++G+ +
Sbjct: 246 NLQNLTILDISNNKIVDGNQL 266
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 325 HIHTLTLGNMGYIWADILKLLANFP-VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNI 383
++ L+L G W +IL+ + +P + L L SN I+ L+ +L L + N I
Sbjct: 201 NLKVLSLNRTGMKWNEILQCASMWPALEELHLVSNDISLLEQPVNNLQNLTILDISNNKI 260
Query: 384 VDWGEVNALGSLPNLKYLNLASTNL 408
VD +++ + LP LK + + S N+
Sbjct: 261 VDGNQLHTIAFLPRLKQV-IVSNNI 284
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 309 IPNDTSGVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFPVTCLKLPSNRITTLDSVP- 367
+ ND S + + + ++ L + N + + L +A P + SN I + S P
Sbjct: 233 VSNDISLLEQPVNNLQNLTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSISFPD 292
Query: 368 ------GMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKE 416
MF SL L + NNI +W +N L L +L+ LN L ++ N E
Sbjct: 293 VDFGHTAMFISLTSLAVNGNNISEWCVINELHKLLHLESLNCHGNPLMDLDKNPE 347
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G+V G+W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R K+NFG F+ AL ++YV D ++ + + ++ +GF+ + ++Q
Sbjct: 67 GSFVRPSKVNFGDDFLTALKKRYVLEDGP---DDDENSCSLKVGSKQVQTIGFEHITKKQ 123
Query: 303 NTNKLPIPNDTS------------GVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFP- 349
++L D S G + + P + L+ N+ W +++ +
Sbjct: 124 --SQLRALQDISLWNCAVSHAGEQGRIAEACPNIRVVNLS-KNLLSTWDEVVLIAEQLKD 180
Query: 350 VTCLKLPSNRITTLDSVPGM---FSSLEELYLQENNIVDWGEV-NALGSLPNLKYLNLAS 405
+ L L N++ P + FS+L+ L L + I W EV + S P L+ L L S
Sbjct: 181 LEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGIT-WTEVLHCAPSWPVLEELYLKS 239
Query: 406 TNL 408
N+
Sbjct: 240 NNI 242
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 45 LKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLR 103
L L HL L I L S P + F L + +++ + E S ++ L KL SL+
Sbjct: 277 LPRLEHLVLSDIGLSSIHFPDAEIGCKTSMFPALKYLIVNDNQISEWSFINELDKLQSLQ 336
Query: 104 ---FTKNPILAEERVVSSREKTIARLGGLKLLNGSAIERQERQGSEYDYIKEFGAVW--- 157
T+NP+ ++ + E IA++ L+ LN I +ER+G+E DY K FG W
Sbjct: 337 ALSCTRNPLSKADK---AEEIIIAKIAQLRTLNRCQILPEERRGAELDYRKAFGNEWRKA 393
Query: 158 -----LDEKR-RAEFLEANPR 172
D+ R A FL A+PR
Sbjct: 394 GGHPDPDKNRPNAAFLSAHPR 414
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
VS+AG+ I +A P I ++LS+NLL++W V I QLK L L+L
Sbjct: 139 VSHAGE-QGRIAEACPNIRVVNLSKNLLSTWDEVVLIAEQLKDLEALDL 186
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G+V G+W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R + +NFG F+ AL ++YV TD ++ + + + ++ +GF+ + ++Q
Sbjct: 67 GSFVRPNIVNFGEDFLTALKKRYVLTDGP---DDDEKSCSLKVGSKQVQTIGFEHITKKQ 123
Query: 303 NTNKLPIPNDTS------------GVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFP- 349
++L D S G + + P + L+ N+ W +++ +
Sbjct: 124 --SQLRSLQDISLWKCAVSCAGERGRIAEACPNIRVVDLS-KNLLSTWDEVILIAEQLKD 180
Query: 350 VTCLKLPSNRITTLDSVPGM---FSSLEELYLQENNIVDWGEV-NALGSLPNLKYLNLAS 405
+ L L N++ P + FS+L+ L L + I W EV + S P L+ L L S
Sbjct: 181 LEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGIT-WTEVLHCAPSWPVLQELYLKS 239
Query: 406 TNL 408
+
Sbjct: 240 NGI 242
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 16/141 (11%)
Query: 45 LKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLR 103
L L HL L I L S P + F L + +++ + E S ++ L KL SL+
Sbjct: 277 LPRLEHLLLSDIGLSSIHFPDAEIGCKTSMFPALTYLIVNDNQISEWSFINELDKLQSLQ 336
Query: 104 ---FTKNPILAEERVVSSREKTIARLGGLKLLNGSAIERQERQGSEYDYIKEFGAVW--- 157
+NP+ ++ + E IA++G LK LN I +ER+G+E DY K FG W
Sbjct: 337 ALSCARNPLTKGDK---AEEIIIAKIGQLKTLNRCQILPEERRGAELDYRKAFGKEWRKA 393
Query: 158 -----LDEKR-RAEFLEANPR 172
D R AEFL A+PR
Sbjct: 394 GGHPDPDRNRPSAEFLSAHPR 414
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
VS AG+ I +A P I +DLS+NLL++W V I QLK L L+L
Sbjct: 139 VSCAGE-RGRIAEACPNIRVVDLSKNLLSTWDEVILIAEQLKDLEALDL 186
>sp|Q32KS0|TBCE_BOVIN Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1
Length = 528
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 27/244 (11%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G+W G++WD+ RGKHDGSH G YF T+
Sbjct: 8 DVIGRRV-EVNGEHATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R K+NFG F+ A+ +YV D E E++ N P +E +GFD V ++Q
Sbjct: 67 GSFIRPHKVNFGVDFLTAIKNRYVLEDE--PKEEETEQIVIIGNKP-VETIGFDSVIKQQ 123
Query: 303 NTNKLPIPNDTS------------GVMEQIFPQGHIHTLTLG-NMGYIWADILKLLANFP 349
++L D S G + + P +I ++ L N+ W +++ +
Sbjct: 124 --SQLSKLQDVSLRNCAVNGAGDKGEIAKACP--NIRSIDLSKNLLSSWEEVIDIADQLK 179
Query: 350 -VTCLKLPSNRIT---TLDSVPGMFSSLEELYLQENNIVDWGEVNALGS-LPNLKYLNLA 404
+ L L N++T + S G F +L+ L L V W EV S P L+ L L
Sbjct: 180 HLEVLNLSENKLTSPSSSPSPTGTFPTLKVLVLNRTG-VTWAEVLRCASGWPVLEKLYLE 238
Query: 405 STNL 408
S N+
Sbjct: 239 SNNI 242
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + I L L L L I + S P + F L + +
Sbjct: 258 LDLSSNQLIDENQLFLIA-YLPRLEQLILSDIGISSIHFPDAGIGCKTSMFPSLQYLVLN 316
Query: 84 EDFVKEGSLLHYLPKLSSLR---FTKNPIL-AEERVVSSREKTIARLGGLKLLNGSAIER 139
++ + + S ++ L KL SL T+NP+ + ++R+ IAR+G L+ LN AIE
Sbjct: 317 DNQIAQWSFMNELDKLQSLHALSCTRNPLTEGSKDAQTTRQFIIARIGQLRTLNKCAIEP 376
Query: 140 QERQGSEYDYIKEFGAVWLD-------EKRRA--EFLEANPR 172
+ER+G+E DY K FG W EK R EFL A+PR
Sbjct: 377 EERRGAELDYRKAFGNEWKKAGGHQDPEKNRPNEEFLAAHPR 418
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 7 NAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
N EI +A P I +DLS+NLL+SW V +I QLKHL LNL
Sbjct: 140 NGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEVLNL 186
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 321 FPQGHIHTLTLGNMGYIWADILKLLANFPVT-CLKLPSNRITTLDSVPGMFSSLEELYLQ 379
FP + L L G WA++L+ + +PV L L SN I + + +++ L L
Sbjct: 204 FPT--LKVLVLNRTGVTWAEVLRCASGWPVLEKLYLESNNIIISERPTDVLQTVKLLDLS 261
Query: 380 ENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKEG 417
N ++D ++ + LP L+ L L+ + +I G
Sbjct: 262 SNQLIDENQLFLIAYLPRLEQLILSDIGISSIHFPDAG 299
>sp|P39937|PAC2_YEAST Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PAC2 PE=1 SV=1
Length = 518
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 194 GHRGTIRYVGSVEGTQGV-WYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLN 252
G+ TI+++G ++ V YG++WD +RGKH G+ + + YF SGSF++ K+
Sbjct: 13 GYFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQIPNSGSFLKESKIK 72
Query: 253 FGS----SFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVH 299
+F EAL KY + N + SI +E +GFD+++
Sbjct: 73 SPGVRRITFYEALSEKYGGSSNNIN--------DLSIGNKRVEGLGFDELN 115
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 30 VGSRVEVIGKGHRGTVAYVGATLXATGKWVGVILD-EAKGKNDGTVQGRKYF-TCEENHG 87
Query: 244 SFMRRDKLNF 253
F+R+ ++
Sbjct: 88 IFVRQSQIQV 97
>sp|P33420|NIP80_YEAST Protein NIP100 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NIP100 PE=1 SV=2
Length = 868
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 196 RGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS-------FMRR 248
+G ++++G + +G+WYGI+ D + GK+DGS NG++YF + S F ++
Sbjct: 27 KGRVKFIGETQFAKGIWYGIELD-KPLGKNDGSANGIRYFDIDLKKANSNGGYYGLFCKK 85
Query: 249 DKLNF 253
D L F
Sbjct: 86 DTLQF 90
>sp|Q9D1E6|TBCB_MOUSE Tubulin-folding cofactor B OS=Mus musculus GN=Tbcb PE=1 SV=2
Length = 244
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 157 WLDEKRRAEFLEANPRVGDNYFQVMEDDIG----LRVCDSEGHRGTIRYVGSVEGTQGVW 212
+ +E R + EA R+ + Q +G +R D RGT+ YVG + G W
Sbjct: 133 YNEELRAQQEAEAAQRLSEEKAQASAISVGSRCEVRAPDHSLRRGTVMYVGLTDFKPGYW 192
Query: 213 YGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFG 254
G+ +D E GK+DGS NG +YF + G+F++ + G
Sbjct: 193 VGVRYD-EPLGKNDGSVNGKRYFECQAKY-GAFVKPSAVTVG 232
>sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn1 PE=1 SV=3
Length = 1281
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 193 EGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
+GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G F+R+ ++
Sbjct: 38 KGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHGIFVRQSQI 94
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 193 EGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
+GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G F+R+ ++
Sbjct: 38 KGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHGIFVRQSQI 94
>sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=Dctn1 PE=2 SV=2
Length = 1280
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 193 EGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
+GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G F+R+ ++
Sbjct: 38 KGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHGIFVRQSQI 94
>sp|Q5U243|CLIP3_XENLA CAP-Gly domain-containing linker protein 3 OS=Xenopus laevis
GN=clip3 PE=2 SV=1
Length = 534
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 184 DIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+IG +V + +G +R+ G + G W+GI+ + T GKHDGS GV+YF T S +G
Sbjct: 404 EIGDQVLVAGQKQGIVRFYGKTDFAPGYWFGIELEKPT-GKHDGSVFGVRYF-TCSAKNG 461
Query: 244 SF 245
F
Sbjct: 462 VF 463
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G R+ GT+R+ G+ E G W G++ D E GK+DGS G++YF
Sbjct: 286 LGDRILLDAEKAGTLRFCGTTEFASGQWVGVELD-EPDGKNDGSVGGIRYF 335
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +G+RGT+ YVG+ G W G+ D +++GK+DG+ G +YF T G
Sbjct: 12 VGSRVEVIGKGYRGTVAYVGATLFATGKWVGVILD-DSKGKNDGTVQGRRYF-TCEENHG 69
Query: 244 SFMRRDKLNF 253
F+R+ ++
Sbjct: 70 IFVRQSQIQV 79
>sp|Q5R686|CLIP3_PONAB CAP-Gly domain-containing linker protein 3 OS=Pongo abelii GN=CLIP3
PE=2 SV=1
Length = 547
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 184 DIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
++G +V + +G +R+ G + G WYGI+ D T GKHDGS GV+YF
Sbjct: 417 EVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPT-GKHDGSVFGVRYF 467
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 180 VMEDDIGLRVCDS---EGHR-GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+M +GLR+ D +G + GT+R+ G+ E G W G++ D E GK+DGS GV+YF
Sbjct: 287 LMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELD-EPEGKNDGSVGGVRYF 345
>sp|B9EHT4|CLIP3_MOUSE CAP-Gly domain-containing linker protein 3 OS=Mus musculus GN=Clip3
PE=1 SV=1
Length = 547
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 DIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
++G +V + +G +R+ G + G WYGI+ D T GKHDGS GV+YF T + G
Sbjct: 417 EVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPT-GKHDGSVFGVRYF-TCAPRHG 474
Query: 244 SFMRRDKLN 252
F ++
Sbjct: 475 VFAPASRIQ 483
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 180 VMEDDIGLRVCDS---EGHR-GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+M +GLR+ D +G + GT+R+ G+ E G W G++ D E GK+DGS GV+YF
Sbjct: 287 LMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELD-EPEGKNDGSVGGVRYF 345
>sp|Q96DZ5|CLIP3_HUMAN CAP-Gly domain-containing linker protein 3 OS=Homo sapiens GN=CLIP3
PE=1 SV=3
Length = 547
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 184 DIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
++G +V + +G +R+ G + G WYGI+ D T GKHDGS GV+YF
Sbjct: 417 EVGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPT-GKHDGSVFGVRYF 467
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 180 VMEDDIGLRVCDS---EGHR-GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+M +GLR+ D +G + GT+R+ G+ E G W G++ D E GK+DGS GV+YF
Sbjct: 287 LMLSALGLRLGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELD-EPEGKNDGSVGGVRYF 345
>sp|Q10235|ALP11_SCHPO Cell polarity protein alp11 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=alp11 PE=1 SV=1
Length = 234
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 181 MEDDIGLRVCDSEGHRGTIRYVGSVE--GTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
++ ++ R C + GTIRY+G V +W G+++D E GK+DG+ +G +YF
Sbjct: 150 LQKNLNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFD-EPVGKNDGTVSGKRYF-NA 207
Query: 239 STTSGSFMRRDKLNFG 254
GSF+R ++ G
Sbjct: 208 KNKHGSFLRSSEVEVG 223
>sp|P11709|BIK1_YEAST Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1
Length = 440
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 196 RGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
RG ++YVG V+ G++ G+D + GK+DGS G KYF T SG F++ K+
Sbjct: 19 RGQLKYVGPVDTKAGMFAGVDLLANI-GKNDGSFMGKKYFQTEYPQSGLFIQLQKV 73
>sp|Q5E951|TBCB_BOVIN Tubulin-folding cofactor B OS=Bos taurus GN=TBCB PE=2 SV=1
Length = 244
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 195 HRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFG 254
RGT+ YVG + G W GI +D E GK+DGS NG +YF + G+F++ + G
Sbjct: 175 RRGTVMYVGLTDFKPGYWIGIRYD-EPLGKNDGSVNGKRYFECQAKY-GAFVKPSVVTVG 232
>sp|P34531|YM92_CAEEL Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans
GN=M01A8.2 PE=4 SV=4
Length = 937
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 173 VGDNYFQVM-EDDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNG 231
DN +V+ DIG V +G +RYVG + G G++ GI+ E GKHDG+ G
Sbjct: 8 TADNPQEVVTAHDIGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQG 66
Query: 232 VKYF 235
V YF
Sbjct: 67 VSYF 70
>sp|Q20728|TBCB_CAEEL Tubulin-specific chaperone B OS=Caenorhabditis elegans GN=F53F4.3
PE=1 SV=1
Length = 229
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 195 HRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMR 247
RG + YVG+ + +GVW G+ +D E GK+DGS GV+YF G F+R
Sbjct: 162 RRGEVAYVGATKFKEGVWVGVKYD-EPVGKNDGSVAGVRYF-DCDPKYGGFVR 212
>sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ro-3
PE=3 SV=3
Length = 1367
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 187 LRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+ + D G +RYVG G W GI+ D E GK+DGS G +YF
Sbjct: 12 IELADGSGRTAFVRYVGETAFAPGTWVGIELD-EPSGKNDGSVQGERYF 59
>sp|Q99426|TBCB_HUMAN Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB PE=1 SV=2
Length = 244
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 187 LRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFM 246
+R RGT+ YVG + G W G+ +D E GK+DGS NG +YF + G+F+
Sbjct: 167 VRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYD-EPLGKNDGSVNGKRYFECQAKY-GAFV 224
Query: 247 RRDKLNFG 254
+ + G
Sbjct: 225 KPAVVTVG 232
>sp|Q8N3C7|CLIP4_HUMAN CAP-Gly domain-containing linker protein 4 OS=Homo sapiens GN=CLIP4
PE=1 SV=1
Length = 705
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 194 GHR-GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
G R GTIR+ G+ G WYGI+ + + GK+DGS GV+YF
Sbjct: 495 GQRLGTIRFFGTTNFAPGYWYGIELE-KPHGKNDGSVGGVQYF 536
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 192 SEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
S GT+RYVG + G+W G++ S +GK+DGS +YF T G +R ++
Sbjct: 633 SSNEMGTVRYVGPTDFASGIWLGLELRS-AKGKNDGSVGDKRYF-TCKPNHGVLVRPSRV 690
Query: 252 NF 253
+
Sbjct: 691 TY 692
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV + GT+R+ G+ E G W GI+ D E GK++GS V+YF
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELD-EPEGKNNGSVGKVQYF 334
>sp|Q66HD5|CLIP4_RAT CAP-Gly domain-containing linker protein 4 OS=Rattus norvegicus
GN=Clip4 PE=2 SV=1
Length = 599
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 194 GHR-GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
G R GTI++ G+ G WYGI+ + + GK+DGS GV+YF
Sbjct: 495 GQRVGTIKFFGTTNFAPGYWYGIELE-KPHGKNDGSVGGVQYF 536
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV + GT+R+ G+ E G W GI+ D E GK++GS V+YF
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELD-EPEGKNNGSVGRVQYF 334
>sp|Q54Z01|TBCB_DICDI Tubulin-specific chaperone B OS=Dictyostelium discoideum GN=tbcb
PE=3 SV=1
Length = 270
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMR 247
G ++YVG+VE + GVW G++ D GK+DGS G +YF S G F +
Sbjct: 208 GKVQYVGTVEFSSGVWIGVELDLPL-GKNDGSVKGKQYFQC-SPKYGCFAK 256
>sp|O55156|CLIP2_RAT CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus
GN=Clip2 PE=1 SV=1
Length = 1046
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV G +RYVG + +G W G++ D E GK+DG+ G +YF
Sbjct: 222 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYF 271
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLN 252
G ++Y+G + G W G+ D GK+DG+ G++YF G F R KL
Sbjct: 94 GVVQYLGETQFAPGQWAGVVLDDPV-GKNDGAVGGLRYFEC-PALQGIFTRPSKLT 147
>sp|Q9Z0H8|CLIP2_MOUSE CAP-Gly domain-containing linker protein 2 OS=Mus musculus GN=Clip2
PE=1 SV=2
Length = 1047
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV G +RYVG + +G W G++ D E GK+DG+ G +YF
Sbjct: 222 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYF 271
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLN 252
G ++Y+G + G W G+ D GK+DG+ GV+YF G F R KL
Sbjct: 94 GVVQYLGETQFAPGQWAGVVLDDPV-GKNDGAVGGVRYFEC-PALQGIFTRPSKLT 147
>sp|Q8CI96|CLIP4_MOUSE CAP-Gly domain-containing linker protein 4 OS=Mus musculus GN=Clip4
PE=1 SV=1
Length = 704
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV GTI++ G+ G WYGI+ + + GK+DGS GV+YF
Sbjct: 486 LGERVLVVGQRVGTIKFFGTTNFAPGYWYGIELE-KPHGKNDGSVGGVQYF 535
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV + GT+R+ G+ E G W GI+ D E GK++GS V+YF
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELD-EPEGKNNGSVGRVQYF 334
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 192 SEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKL 251
S T+RYVG + G+W G++ S +GK+DG+ +YF T G +R ++
Sbjct: 632 SSNEMATVRYVGPTDFASGIWLGLELRS-AKGKNDGAVGDKRYF-TCKPNYGVLVRPSRV 689
Query: 252 NF 253
+
Sbjct: 690 TY 691
>sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2
PE=1 SV=1
Length = 1046
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV G +RYVG + +G W G++ D E GK+DG+ G +YF
Sbjct: 221 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYF 270
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLN 252
G ++Y+G + G W G+ D GK+DG+ GV+YF G F R KL
Sbjct: 93 GVVQYLGETQFAPGQWAGVVLDDPV-GKNDGAVGGVRYFEC-PALQGIFTRPSKLT 146
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus gallus
GN=CLIP1 PE=2 SV=1
Length = 1433
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
IG RV G +R++G + +G W G++ D E GK+DG+ G +YF
Sbjct: 217 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYFQCQ 269
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
+G RV + G I+++G + G W GI D E GK+DGS GV+YF G
Sbjct: 61 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLD-EPIGKNDGSVAGVRYFQCEP-LRGI 118
Query: 245 FMRRDKLN 252
F R KL+
Sbjct: 119 FTRPSKLS 126
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1
PE=1 SV=2
Length = 1438
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
IG RV G +R++G + +G W G++ D E GK+DG+ G +YF
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYFQCQ 266
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
+G RV + G I+++G + G W GI D E GK+DGS GV+YF G
Sbjct: 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLD-EPIGKNDGSVAGVRYFQCEP-LKGI 117
Query: 245 FMRRDKL 251
F R KL
Sbjct: 118 FTRPSKL 124
>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1
Length = 1826
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
G +RYVG + +G W G++ D + GK+DGS G +YF
Sbjct: 1715 GVVRYVGPADFQEGTWVGVELDLPS-GKNDGSIGGKQYF 1752
>sp|P43333|RU2A_ARATH U2 small nuclear ribonucleoprotein A' OS=Arabidopsis thaliana
GN=At1g09760 PE=2 SV=2
Length = 249
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 345 LANFP----VTCLKLPSNRITTLDSVPGMF-SSLEELYLQENNIVDWGEVNALGSLPNLK 399
L NFP + L + +NRIT ++ G F L L L N +V+ E++ L S+P L+
Sbjct: 57 LENFPYLNRLGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQ 116
Query: 400 YLNLASTNLRNIKLNKEGHYR 420
YL+L N + K+ +YR
Sbjct: 117 YLSLLDNN-----ITKKANYR 132
>sp|P79065|TIP1_SCHPO Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tip1 PE=1 SV=1
Length = 461
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 194 GHRGTIRYVGSVEGTQGVWYGIDWDSETR--GKHDGSHNGVKYFWT-HSTTSGSFMRRDK 250
G RG +RY G VE +GV+ G++ E GK+ G +G +YF T ++ +G F+ DK
Sbjct: 13 GERGFVRYAGEVENRKGVYVGLELLPEFAEFGKNRGVVDGREYFKTKNNEKTGIFVPFDK 72
Query: 251 LNFG 254
Sbjct: 73 CKLA 76
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
+G RV G +R++G + +G W G++ D E GK+DG+ G +YF
Sbjct: 213 VGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELD-EPLGKNDGAVAGTRYFQCQ 265
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
+G RV + G I+++G + G W GI D E GK+DGS GV+YF G
Sbjct: 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLD-EPIGKNDGSVAGVRYFQCEP-LKGI 117
Query: 245 FMRRDKL 251
F R KL
Sbjct: 118 FTRPSKL 124
>sp|O42667|SSM4_SCHPO Microtubule-associated protein ssm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssm4 PE=1 SV=1
Length = 670
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 194 GHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMR 247
G G +R+ GS + G+W G++ + +GK+DGS G +YF + G F+R
Sbjct: 14 GELGIVRFAGSTDFESGIWLGVELLN-GKGKNDGSVKGKRYF-SCEKGKGIFVR 65
>sp|Q5EAD8|LRC51_BOVIN Leucine-rich repeat-containing protein 51 OS=Bos taurus GN=LRRC51
PE=2 SV=1
Length = 192
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +T++D V F +L LYL N+I GEVN L +LP L+ L L
Sbjct: 84 IDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAALPRLRSLTL 134
>sp|B6CZ61|LRC51_RAT Leucine-rich repeat-containing protein 51 OS=Rattus norvegicus
GN=Lrrc51 PE=2 SV=1
Length = 192
Score = 38.9 bits (89), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +TT+D V F +L LYL N+I GEVN L LP L+ L L
Sbjct: 84 IDLSFNDLTTIDPVLTTFFNLSVLYLHGNSIHRLGEVNKLAVLPRLRSLTL 134
>sp|P13496|DCTN1_DROME Dynactin subunit 1 OS=Drosophila melanogaster GN=Gl PE=1 SV=2
Length = 1265
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 197 GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNF 253
GT+ YVG G W G+ D E +GK+ GS G +YF G F+R +L
Sbjct: 21 GTVAYVGMTSFAVGKWVGVVLD-EPKGKNSGSIKGQQYFQCDENC-GMFVRPTQLRL 75
>sp|Q9DAK8|LRC51_MOUSE Leucine-rich repeat-containing protein 51 OS=Mus musculus GN=Lrrc51
PE=2 SV=1
Length = 192
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +TT+D V F +L LYL N I GEVN L LP L+ L L
Sbjct: 84 IDLSFNDLTTIDPVLTTFFNLSVLYLHGNGIHRLGEVNKLAVLPRLRSLTL 134
>sp|P53904|TBCB_YEAST Tubulin-specific chaperone B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ALF1 PE=1 SV=1
Length = 254
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 199 IRYVGSVE-GTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNF---- 253
+RYVG + G W G+++ E GK+DG NGV F + GSF+R +
Sbjct: 177 LRYVGPLPLDVMGTWCGVEF-PEAAGKNDGRINGVTLFGPVAPGHGSFVRPRAVEILSKD 235
Query: 254 -GSSFMEALHRKYVETDNEL 272
S+ +E +H VE+D+E+
Sbjct: 236 EESAEVEDVHDD-VESDDEI 254
>sp|B6CZ54|LRC51_PROCO Leucine-rich repeat-containing protein 51 OS=Propithecus coquereli
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +T++D V F +L LYL N+I GEVN L LP L+ L L
Sbjct: 84 IDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQHLGEVNKLAVLPRLRSLTL 134
>sp|B6CZ45|LRC51_MACMU Leucine-rich repeat-containing protein 51 OS=Macaca mulatta
GN=LRTOMT PE=2 SV=1
Length = 192
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +T++D V F +L LYL N+I GEVN L LP L+ L L
Sbjct: 84 IDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQHLGEVNKLAVLPRLRSLTL 134
>sp|Q96E66|LRC51_HUMAN Leucine-rich repeat-containing protein 51 OS=Homo sapiens GN=LRTOMT
PE=2 SV=1
Length = 192
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 353 LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+ L N +T++D V F +L LYL N+I GEVN L LP L+ L L
Sbjct: 84 IDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTL 134
>sp|Q5QJ74|TBCEL_HUMAN Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens
GN=TBCEL PE=2 SV=2
Length = 424
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 93 LHYLPKLSSLRFTKNPILAEERVVSSREKTIARLGGLKLLNGSAIERQERQGSEYDYIKE 152
L+ PKL +R P+L R+ IARL + LNGS + ER+ SE +I+
Sbjct: 248 LNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVTDGEREDSERFFIRY 307
Query: 153 FGAVWLDE 160
+ V +E
Sbjct: 308 YVDVPQEE 315
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 326 IHTLTLGNMGYIWADILKLLANFP-VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIV 384
+ L L N W + +L P + L L N T+ SL+ L++ +NN+
Sbjct: 128 VRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQ 187
Query: 385 DWGEVNALGSL-PNLKYLNLASTNLRNIK 412
DW E+ LG + P+L L LA+ +L I+
Sbjct: 188 DWTEIRKLGVMFPSLDTLVLANNHLNAIE 216
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 338 WADILKLLANFP-VTCLKLPSNRITTL----DSVPGMFSSLEELYLQENNIVDWGEVNAL 392
W +I KL FP + L L +N + + DS+ +F +L + L ++ + W +++ L
Sbjct: 189 WTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWEDIDKL 248
Query: 393 GSLPNLKYLNLASTNL 408
S P L+ + L L
Sbjct: 249 NSFPKLEEVRLLGIPL 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,349,577
Number of Sequences: 539616
Number of extensions: 6929688
Number of successful extensions: 16580
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 16370
Number of HSP's gapped (non-prelim): 254
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)