Your job contains 1 sequence.
>psy9363
MDSRVSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNLRIRLKSS
SAPAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLRFTKNPILAEERVVSSRE
KTIARLGGLKLLNGSAIERQERQGSEYDYIKEFGAVWLDEKRRAEFLEANPRVGDNYFQV
MEDDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHST
TSGSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHE
EQNTNKLPIPNDTSGVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFPVTCLKLPSNRI
TTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKEGHYR
P
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9363
(421 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-051030-120 - symbol:tbce "tubulin folding c... 277 7.0e-28 2
UNIPROTKB|Q32KS0 - symbol:TBCE "Tubulin-specific chaperon... 282 1.6e-22 1
UNIPROTKB|Q5U508 - symbol:tbce "Tubulin-specific chaperon... 276 8.5e-22 1
UNIPROTKB|Q15813 - symbol:TBCE "Tubulin-specific chaperon... 267 1.1e-20 1
UNIPROTKB|Q5RBD9 - symbol:TBCE "Tubulin-specific chaperon... 267 1.1e-20 1
ASPGD|ASPL0000026995 - symbol:AN5531 species:162425 "Emer... 231 1.4e-20 2
FB|FBgn0033055 - symbol:tbce "tubulin-specific chaperone ... 266 1.6e-20 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 258 1.3e-19 1
DICTYBASE|DDB_G0269990 - symbol:tbcE "tubulin binding cof... 253 4.9e-19 1
UNIPROTKB|B7Z3P1 - symbol:TBCE "cDNA FLJ59210, highly sim... 250 1.4e-18 1
TAIR|locus:2825339 - symbol:PFI "AT1G71440" species:3702 ... 248 1.9e-18 1
RGD|1305533 - symbol:Tbce "tubulin folding cofactor E" sp... 247 2.4e-18 1
UNIPROTKB|F1NVX8 - symbol:TBCE "Uncharacterized protein" ... 247 2.4e-18 1
WB|WBGene00019503 - symbol:K07H8.1 species:6239 "Caenorha... 190 1.2e-16 2
UNIPROTKB|F1RGX1 - symbol:TBCE "Uncharacterized protein" ... 203 9.9e-16 1
UNIPROTKB|G4NCM1 - symbol:MGG_00378 "Tubulin-specific cha... 191 4.7e-12 2
CGD|CAL0005987 - symbol:orf19.2921 species:5476 "Candida ... 182 5.1e-11 1
SGD|S000000809 - symbol:PAC2 "Microtubule effector requir... 145 7.6e-08 2
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 121 8.5e-07 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 121 8.5e-07 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 119 1.4e-06 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 119 1.4e-06 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 112 8.1e-06 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 125 2.3e-05 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 123 4.0e-05 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 123 4.0e-05 1
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 122 5.1e-05 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 121 6.7e-05 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 120 8.9e-05 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 115 0.00030 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 125 0.00033 1
ZFIN|ZDB-GENE-040426-1719 - symbol:tbcela "tubulin foldin... 89 0.00084 2
>ZFIN|ZDB-GENE-051030-120 [details] [associations]
symbol:tbce "tubulin folding cofactor E"
species:7955 "Danio rerio" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 Pfam:PF01302
ZFIN:ZDB-GENE-051030-120 GO:GO:0005737 GO:GO:0005856
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
EMBL:BC085669 IPI:IPI00507049 RefSeq:NP_001035078.2
UniGene:Dr.84734 ProteinModelPortal:Q5U378 SMR:Q5U378 STRING:Q5U378
Ensembl:ENSDART00000065585 Ensembl:ENSDART00000127915 GeneID:664760
KEGG:dre:664760 InParanoid:Q5U378 NextBio:20902338
ArrayExpress:Q5U378 Bgee:Q5U378 Uniprot:Q5U378
Length = 521
Score = 277 (102.6 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 55/128 (42%), Positives = 82/128 (64%)
Query: 180 VMEDDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHS 239
++++ +G RVC +G RGT+RYVG V T GVW G++WD RGKHDGSH+GV+YF
Sbjct: 2 MLDEAVGRRVC-CDGERGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRH 60
Query: 240 TTSGSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVH 299
T GSF+R K +FG ++ AL ++Y E+T EE+K I++ + +VGF+ V
Sbjct: 61 PTGGSFVRPQKASFGVDYVTALKQRYEVEIEEVTA----EEMK--ISSKTVVMVGFENVK 114
Query: 300 EEQNTNKL 307
++Q+ L
Sbjct: 115 KKQSVKNL 122
Score = 171 (65.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 57/164 (34%), Positives = 84/164 (51%)
Query: 16 EQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNLRI----RLKSSSAPAHSYLAEV 71
E + + LDLS N +A V EI+ L L LNL +K S PA +
Sbjct: 242 EHVLQALTVLDLSNNQIAQE-TVLEIS-HLPRLERLNLSSTSLSEIKFSDVPAGK---KT 296
Query: 72 VFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLRFT---KNPILAEER-VVSSREKTIARLG 127
F L L D++ + E +++ L KL SL + +NP+L +E+ + ++R+ IARLG
Sbjct: 297 TLFPALKELLLDDNNISEWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQIMIARLG 356
Query: 128 GLKLLNGSAIERQERQGSEYDYIKEFGAVWLDEKRRAEFLEANP 171
L+LL+ I ER+G+E DY K FG+ WL E + NP
Sbjct: 357 QLELLDMRQILSDERRGAELDYCKMFGSAWLRAGGHREAEKNNP 400
Score = 113 (44.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL-RIRLKSSSAP 63
VS G +EI PF++ LDLS NLL+SW + IT QL L+ L+L RL SSAP
Sbjct: 132 VSAPGP-ENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQELHLSHNRLSISSAP 190
Query: 64 A 64
+
Sbjct: 191 S 191
Score = 93 (37.8 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 314 SGVMEQIFPQGHIHTLT---LGNMGYIWADILKLLANFP-VTCLKLPSNRITTL--DSVP 367
+ + E + P+ + LT L N +L++ ++ P + L L S ++ + VP
Sbjct: 233 NNITELLRPEHVLQALTVLDLSNNQIAQETVLEI-SHLPRLERLNLSSTSLSEIKFSDVP 291
Query: 368 G-----MFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKE 416
+F +L+EL L +NNI +W VN L LP+L YL+ RN L+KE
Sbjct: 292 AGKKTTLFPALKELLLDDNNISEWRVVNELEKLPSLVYLSCR----RNPLLHKE 341
Score = 51 (23.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 369 MFSSLEELYLQENNIVD 385
M+ +EELYL +NNI +
Sbjct: 221 MWQQVEELYLADNNITE 237
>UNIPROTKB|Q32KS0 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9913
"Bos taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0014889 "muscle atrophy" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] Reactome:REACT_17065
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450 Pfam:PF01302
GO:GO:0005829 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 Reactome:REACT_103209 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875
Pfam:PF12799 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:BT026156
EMBL:BC109955 IPI:IPI00713122 RefSeq:NP_001033121.1 UniGene:Bt.3254
ProteinModelPortal:Q32KS0 SMR:Q32KS0 STRING:Q32KS0 PRIDE:Q32KS0
Ensembl:ENSBTAT00000018249 GeneID:505066 KEGG:bta:505066 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 InParanoid:Q32KS0
OMA:CLRNPLT OrthoDB:EOG41NTKV NextBio:20866964 Uniprot:Q32KS0
Length = 528
Score = 282 (104.3 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 80/240 (33%), Positives = 122/240 (50%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G+W G++WD+ RGKHDGSH G YF T+
Sbjct: 8 DVIGRRV-EVNGEHATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R K+NFG F+ A+ +YV D E E++ N P +E +GFD V ++Q
Sbjct: 67 GSFIRPHKVNFGVDFLTAIKNRYVLEDEPK--EEETEQIVIIGNKP-VETIGFDSVIKQQ 123
Query: 303 NT-NKLP---IPN---DTSGVMEQIFPQ-GHIHTLTLG-NMGYIWADILKLLANFP-VTC 352
+ +KL + N + +G +I +I ++ L N+ W +++ + +
Sbjct: 124 SQLSKLQDVSLRNCAVNGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEV 183
Query: 353 LKLPSNRITTLDSVP---GMFSSLEELYLQENNIVDWGEVNALGS-LPNLKYLNLASTNL 408
L L N++T+ S P G F +L+ L L + W EV S P L+ L L S N+
Sbjct: 184 LNLSENKLTSPSSSPSPTGTFPTLKVLVLNRTGVT-WAEVLRCASGWPVLEKLYLESNNI 242
Score = 146 (56.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 55/162 (33%), Positives = 78/162 (48%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + I L L L L I + S P + F L + +
Sbjct: 258 LDLSSNQLIDENQLFLIA-YLPRLEQLILSDIGISSIHFPDAGIGCKTSMFPSLQYLVLN 316
Query: 84 EDFVKEGSLLHYLPKLSSLRF---TKNPILAEER-VVSSREKTIARLGGLKLLNGSAIER 139
++ + + S ++ L KL SL T+NP+ + ++R+ IAR+G L+ LN AIE
Sbjct: 317 DNQIAQWSFMNELDKLQSLHALSCTRNPLTEGSKDAQTTRQFIIARIGQLRTLNKCAIEP 376
Query: 140 QERQGSEYDYIKEFGAVWLD-------EKRRA--EFLEANPR 172
+ER+G+E DY K FG W EK R EFL A+PR
Sbjct: 377 EERRGAELDYRKAFGNEWKKAGGHQDPEKNRPNEEFLAAHPR 418
Score = 114 (45.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 41/112 (36%), Positives = 56/112 (50%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL-RIRLKS-SSA 62
V+ AG EI +A P I +DLS+NLL+SW V +I QLKHL LNL +L S SS+
Sbjct: 139 VNGAGDK-GEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEVLNLSENKLTSPSSS 197
Query: 63 PAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLRFTKNPILAEER 114
P+ + + + L RT + + P L L N I+ ER
Sbjct: 198 PSPTGTFPTLKVLVLNRT--GVTWAEVLRCASGWPVLEKLYLESNNIIISER 247
Score = 66 (28.3 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 344 LLANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLN 402
+L++ ++ + P I S MF SL+ L L +N I W +N L L +L L+
Sbjct: 284 ILSDIGISSIHFPDAGIGCKTS---MFPSLQYLVLNDNQIAQWSFMNELDKLQSLHALS 339
>UNIPROTKB|Q5U508 [details] [associations]
symbol:tbce "Tubulin-specific chaperone E" species:8355
"Xenopus laevis" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:BC084879 RefSeq:NP_001088530.1
UniGene:Xl.18306 ProteinModelPortal:Q5U508 SMR:Q5U508 PRIDE:Q5U508
GeneID:495403 KEGG:xla:495403 Xenbase:XB-GENE-865843 Uniprot:Q5U508
Length = 522
Score = 276 (102.2 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 79/234 (33%), Positives = 118/234 (50%)
Query: 189 VCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRR 248
+CD G T+RYVG+V T G+W G++WD+ RGKH+G+H G KYF T GSF+R
Sbjct: 15 ICD--GEYATVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFIRL 72
Query: 249 DKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQNT-NKL 307
K NFG F+ AL ++Y L +N E V I +ELVGF+ + EEQ+ NKL
Sbjct: 73 KKANFGVDFLAALRKRY-----GLKSEQNEELV---IGKKTVELVGFESIQEEQSKLNKL 124
Query: 308 PIPN------DTSGVMEQIFPQ-GHIHTLTLG-NMGYIWADILKLLANFP-VTCLKLPSN 358
+ +G QI +I T L N+ W + + + +T L L N
Sbjct: 125 KDVSLRECAVSNAGEKGQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSEN 184
Query: 359 RI---TTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSL-PNLKYLNLASTNL 408
++ + S+ F +L+ L L + W E+ S+ P L+ L+L S ++
Sbjct: 185 KLNPSSNPSSLATSFCNLKVLSLNRTGM-KWNEILQCASMWPALEELHLVSNDI 237
>UNIPROTKB|Q15813 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9606
"Homo sapiens" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006457 "protein folding" evidence=TAS] [GO:0007023
"post-chaperonin tubulin folding pathway" evidence=IDA] [GO:0051087
"chaperone binding" evidence=TAS] [GO:0005874 "microtubule"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0051084 "'de novo' posttranslational protein
folding" evidence=TAS] Reactome:REACT_17015 InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0000226 GO:GO:0008344
GO:GO:0009791 GO:GO:0051084 GO:GO:0048589 GO:GO:0051087
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 GO:GO:0014889
GO:GO:0048936 GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513
HOVERGEN:HBG084170 OrthoDB:EOG41NTKV EMBL:U61232 EMBL:BT007086
EMBL:AL357556 EMBL:AL672237 EMBL:BC008654 IPI:IPI00018402
RefSeq:NP_001072983.1 RefSeq:NP_003184.1 UniGene:Hs.740537
ProteinModelPortal:Q15813 SMR:Q15813 STRING:Q15813
PhosphoSite:Q15813 DMDM:74762146 PaxDb:Q15813 PeptideAtlas:Q15813
PRIDE:Q15813 DNASU:6905 Ensembl:ENST00000366601
Ensembl:ENST00000406207 GeneID:6905 KEGG:hsa:6905 UCSC:uc001hwz.1
GeneCards:GC01P235530 HGNC:HGNC:11582 HPA:HPA026552 HPA:HPA026557
HPA:HPA026559 MIM:241410 MIM:244460 MIM:604934 neXtProt:NX_Q15813
Orphanet:93324 Orphanet:2323 PharmGKB:PA36346 InParanoid:Q15813
PhylomeDB:Q15813 GenomeRNAi:6905 NextBio:27001 ArrayExpress:Q15813
Bgee:Q15813 CleanEx:HS_TBCE Genevestigator:Q15813
GermOnline:ENSG00000116957 Uniprot:Q15813
Length = 527
Score = 267 (99.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 81/247 (32%), Positives = 120/247 (48%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R +K+NFG+ F+ A+ +YV D R+ E++ N P +E +GFD + ++Q
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRK--EQIVTIGNKP-VETIGFDSIMKQQ 123
Query: 303 NT-NKLP---IPN-------DTSGVMEQIFPQGHIHTLTLG-NMGYIWADILKL------ 344
+ +KL + N + GV E P +I + L N+ W +++ +
Sbjct: 124 SQLSKLQEVSLRNCAVSCAGEKGGVAEAC-P--NIRKVDLSKNLLSSWDEVIHIADQLRH 180
Query: 345 --LANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEV-NALGSLPNLKYL 401
+ N LK PS + T G S L+ L L + I W EV + P L+ L
Sbjct: 181 LEVLNVSENKLKFPSGSVLT-----GTLSVLKVLVLNQTGIT-WAEVLRCVAGCPGLEEL 234
Query: 402 NLASTNL 408
L S N+
Sbjct: 235 YLESNNI 241
Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
Identities = 51/162 (31%), Positives = 73/162 (45%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + + L L L L + S P + F L + +
Sbjct: 257 LDLSSNQLIDENQL-YLIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVN 315
Query: 84 EDFVKEGSLLHYLPKLSSLRFT---KNPILAEERVV-SSREKTIARLGGLKLLNGSAIER 139
++ + + S + L KL SLR +NP+ E++ ++R IA +G LK LN I
Sbjct: 316 DNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILP 375
Query: 140 QERQGSEYDYIKEFGAVWLD-------EKRRA--EFLEANPR 172
+ER+ +E DY K FG W EK R EFL A+PR
Sbjct: 376 EERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPR 417
Score = 93 (37.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL-RIRLKSSSAP 63
VS AG+ + +A P I +DLS+NLL+SW V I QL+HL LN+ +LK S
Sbjct: 139 VSCAGEKGG-VAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKLKFPSGS 197
Query: 64 AHSYLAEVVFFVHLGRT 80
+ V+ + L +T
Sbjct: 198 VLTGTLSVLKVLVLNQT 214
Score = 71 (30.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 344 LLANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNL 403
+L++ ++ L P I S MF SL+ L + +N I W N L LP+L+ L+
Sbjct: 283 ILSDTGISSLHFPDAGIGCKTS---MFPSLKYLVVNDNQISQWSFFNELEKLPSLRALSC 339
Query: 404 ASTNLRNIKLNKE 416
LRN L KE
Sbjct: 340 ----LRN-PLTKE 347
>UNIPROTKB|Q5RBD9 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9601
"Pongo abelii" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:CR858712 RefSeq:NP_001125526.1
UniGene:Pab.19173 ProteinModelPortal:Q5RBD9 SMR:Q5RBD9 PRIDE:Q5RBD9
GeneID:100172438 KEGG:pon:100172438 InParanoid:Q5RBD9
Uniprot:Q5RBD9
Length = 527
Score = 267 (99.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 83/248 (33%), Positives = 123/248 (49%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGQRV-EVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R +K+NFG+ F+ A+ +YV D R+ E++ N P +E +GFD + ++Q
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRK--EQIVTIGNKP-VETIGFDSIMKQQ 123
Query: 303 NT-NKLP---IPN-------DTSGVMEQIFPQGHIHTLTLG-NMGYIWADILKL------ 344
+ +KL + N + GV E P +I + L N+ W +++ +
Sbjct: 124 SQLSKLQEVSLRNCAVSCAGEKGGVAEGC-P--NIRKVDLSKNLLSSWDEVIHIADQLRH 180
Query: 345 --LANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVN--ALGSLPNLKY 400
+ N LK PS + T G S+L+ L L + I W EV A+G P L+
Sbjct: 181 LEVLNVSENKLKFPSGSVLT-----GTLSALKVLVLNQTGIT-WAEVLRCAMGC-PGLEE 233
Query: 401 LNLASTNL 408
L L S N+
Sbjct: 234 LYLESNNI 241
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 51/162 (31%), Positives = 74/162 (45%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + + L L L L I + S P + F L + +
Sbjct: 257 LDLSSNQLIDENQL-YLIAHLPRLEQLILSDIGISSLHFPDAGIGCKTSLFPSLKYLVVN 315
Query: 84 EDFVKEGSLLHYLPKLSSLRFT---KNPILAEERVV-SSREKTIARLGGLKLLNGSAIER 139
++ + + S + L KL SLR +NP+ E++ ++R IA +G LK LN I
Sbjct: 316 DNQISQWSFFNELDKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILP 375
Query: 140 QERQGSEYDYIKEFGAVWLD-------EKRRA--EFLEANPR 172
+ER+ +E DY K FG W +K R EFL A+PR
Sbjct: 376 EERRRAELDYRKAFGNEWKQAGGHKDPDKNRLSEEFLTAHPR 417
>ASPGD|ASPL0000026995 [details] [associations]
symbol:AN5531 species:162425 "Emericella nidulans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] InterPro:IPR000938 Pfam:PF01302
EMBL:BN001305 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:AACD01000094 RefSeq:XP_663135.1 ProteinModelPortal:Q5B1P9
EnsemblFungi:CADANIAT00003551 GeneID:2871821 KEGG:ani:AN5531.2
HOGENOM:HOG000191667 Uniprot:Q5B1P9
Length = 606
Score = 231 (86.4 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 49/116 (42%), Positives = 67/116 (57%)
Query: 193 EGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF--WTHSTTSGSFMRRDK 250
+GH TIRYVG V+GT G W G++WD TRGKH G HNGV+YF + T+GSF+R +
Sbjct: 21 DGHLCTIRYVGKVDGTSGEWLGVEWDDPTRGKHSGQHNGVRYFRCLRNHPTAGSFVRPSR 80
Query: 251 -LNFGSSFMEALHRKYV---ETDNELTVRENVE-EVKASINAPFLELVGFDQVHEE 301
+ SF+EA+ KY E E R + E E + E VGFD++ ++
Sbjct: 81 PADSPRSFLEAVREKYASDFEQSRERQARPDAEFEEPIRFKSKIAEEVGFDKIRKQ 136
Score = 82 (33.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 338 WADILKLLANFP-VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLP 396
W I ++ A FP +T L +N+I+ + + P + +++ L L N I + AL SL
Sbjct: 240 WEQISRVAAQFPSLTWLSASANQISMVRT-P-ISNTIITLILDNNEIGSLSSIRALTSLQ 297
Query: 397 NLKYLNLASTNLRNIKLNK-EGH 418
NL++L+L + + + EGH
Sbjct: 298 NLEHLSLRGNCIDAVAAAETEGH 320
>FB|FBgn0033055 [details] [associations]
symbol:tbce "tubulin-specific chaperone E" species:7227
"Drosophila melanogaster" [GO:0007021 "tubulin complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0046785
"microtubule polymerization" evidence=IGI;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000938 Pfam:PF01302 EMBL:AE013599 GO:GO:0005737
GO:GO:0022008 GO:GO:0007274 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0008582 GO:GO:0046785
RefSeq:NP_995747.1 ProteinModelPortal:A1Z6J4 SMR:A1Z6J4
STRING:A1Z6J4 PaxDb:A1Z6J4 PRIDE:A1Z6J4 GeneID:35532 UCSC:CG7861-RA
FlyBase:FBgn0033055 eggNOG:KOG3207 InParanoid:A1Z6J4
OrthoDB:EOG4T4B9T PhylomeDB:A1Z6J4 NextBio:793888 Bgee:A1Z6J4
Uniprot:A1Z6J4
Length = 542
Score = 266 (98.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 69/239 (28%), Positives = 121/239 (50%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
+G R+ + + GT+RYVG V G G W GI+WD RGKH+G +G +YF T + T GS
Sbjct: 14 LGTRIKIGDNY-GTVRYVGEVSGHMGSWLGIEWDDGLRGKHNGIVDGKRYFQTQTPTGGS 72
Query: 245 FMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQNT 304
F+R K+ ++ +A +Y+ D+ + E +AS+ A E+VG D++ +Q+
Sbjct: 73 FIRPGKVGPCATLEDAARERYLNYDSSNVDESLIREAQASLQASLFEVVGMDKIARKQSK 132
Query: 305 ----NKLPI---PNDTSGVMEQIFPQGHIHTLTLGN-MGYIWADILKLLANFP-VTCLKL 355
++ + P + +G ++++ H+ TL + + + + W + + P +T L L
Sbjct: 133 FEQLEEVSVDQTPVNAAGYLKELT---HLTTLNVSHTLIWNWEIVASIAQQLPSLTNLNL 189
Query: 356 PSNRIT--TLDSVPGM---FSSLEELYLQENNIVDWGEVNALGSL-PNLKYLNLASTNL 408
SNR+ T + + F L+ + L+ DW +V L PN+ L L +L
Sbjct: 190 SSNRLVLPTSSQITELEPSFRQLKRINLRSCGFSDWKDVMHTALLWPNILSLGLQENSL 248
Score = 119 (46.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 303 NTNKLPIPNDTSGVMEQIFPQ-GHIHTLTLGNMGYI-WADILKLLANFP-VTCLKLPSNR 359
++N+L +P TS + ++ P + + L + G+ W D++ +P + L L N
Sbjct: 190 SSNRLVLP--TSSQITELEPSFRQLKRINLRSCGFSDWKDVMHTALLWPNILSLGLQENS 247
Query: 360 ITTLDSVPG--MFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLRNIKL 413
+ L V +F L EL L NI+D+ +V LG+L L+ LN+ + IKL
Sbjct: 248 LGQLAEVDRTKIFKQLHELDLHRTNIMDFDQVTKLGNLTTLRLLNIMENGIEEIKL 303
Score = 54 (24.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNL---RIRLKSSS 61
L++S L+ +W V I QL L +LNL R+ L +SS
Sbjct: 161 LNVSHTLIWNWEIVASIAQQLPSLTNLNLSSNRLVLPTSS 200
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 258 (95.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 76/242 (31%), Positives = 119/242 (49%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G+V G+W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R K+NFG F+ AL ++YV D EN +K + + ++ +GF+ + ++Q
Sbjct: 67 GSFVRPSKVNFGDDFLTALKKRYVLEDGP-DDDENSCSLK--VGSKQVQTIGFEHITKKQ 123
Query: 303 NTNKLPIPNDTS---GVMEQIFPQG-------HIHTLTLG-NMGYIWADILKLLANFP-V 350
+ +L D S + QG +I + L N+ W +++ + +
Sbjct: 124 S--QLRALQDISLWNCAVSHAGEQGRIAEACPNIRVVNLSKNLLSTWDEVVLIAEQLKDL 181
Query: 351 TCLKLPSNRITTLDSVPGM---FSSLEELYLQENNIVDWGEV-NALGSLPNLKYLNLAST 406
L L N++ P + FS+L+ L L + I W EV + S P L+ L L S
Sbjct: 182 EALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGIT-WTEVLHCAPSWPVLEELYLKSN 240
Query: 407 NL 408
N+
Sbjct: 241 NI 242
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/161 (32%), Positives = 75/161 (46%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N + I L L HL L I L S P + F L + +
Sbjct: 258 LDLSSNPSIDESQLSLIA-DLPRLEHLVLSDIGLSSIHFPDAEIGCKTSMFPALKYLIVN 316
Query: 84 EDFVKEGSLLHYLPKLSSLRF---TKNPILAEERVVSSREKTIARLGGLKLLNGSAIERQ 140
++ + E S ++ L KL SL+ T+NP+ ++ + E IA++ L+ LN I +
Sbjct: 317 DNQISEWSFINELDKLQSLQALSCTRNPLSKADK---AEEIIIAKIAQLRTLNRCQILPE 373
Query: 141 ERQGSEYDYIKEFGAVWL--------DEKR-RAEFLEANPR 172
ER+G+E DY K FG W D+ R A FL A+PR
Sbjct: 374 ERRGAELDYRKAFGNEWRKAGGHPDPDKNRPNAAFLSAHPR 414
>DICTYBASE|DDB_G0269990 [details] [associations]
symbol:tbcE "tubulin binding cofactor E"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
dictyBase:DDB_G0269990 Pfam:PF01302 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005856 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799 RefSeq:XP_646451.1
HSSP:Q8CI96 ProteinModelPortal:Q55CN0 EnsemblProtists:DDB0266639
GeneID:8617411 KEGG:ddi:DDB_G0269990 OMA:LVWETGE Uniprot:Q55CN0
Length = 525
Score = 253 (94.1 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 81/241 (33%), Positives = 127/241 (52%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
IG RV +G GTIRY G V+G +G WYGI+WD RGKH G+ G +YF + SGS
Sbjct: 15 IGERVKGDDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCINKGSGS 74
Query: 245 FMRRDKLNFGSSFMEALHRKYVET-DN--ELTVRENVEEVKASINAPFLELVGFDQVHEE 301
FM+ +KL G +FM+++ K+ + DN +L V E++K I +++G +Q E
Sbjct: 75 FMKYEKLIKGETFMKSISDKFHQKIDNYDDLYVDSTKEDIKIQI-----QMIGMNQTREN 129
Query: 302 Q---------NTNKLPIPN-DTSGVMEQIFPQGHIHTLTLGN-MGYIWADILKLLANFP- 349
Q + + LPI D S ++ F ++ L L N + W I+KLL P
Sbjct: 130 QKKFIAQTLLSASYLPISEIDESPLIYNNFK--NLIELNLSNCLLNSWTQIVKLLKQLPN 187
Query: 350 VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLR 409
+ L L +NR++ F+ ++E + N+ ++G N++ N+K L L ++NL
Sbjct: 188 LNRLHLCNNRLS--------FN-IDEFKKEVNSNNEYG--NSIDDC-NVKDLILVNSNLS 235
Query: 410 N 410
N
Sbjct: 236 N 236
>UNIPROTKB|B7Z3P1 [details] [associations]
symbol:TBCE "cDNA FLJ59210, highly similar to
Tubulin-specific chaperone E" species:9606 "Homo sapiens"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000938 InterPro:IPR001931 Pfam:PF01249
Pfam:PF01302 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 HOVERGEN:HBG084170 OMA:CLRNPLT EMBL:AL357556
EMBL:AL672237 UniGene:Hs.740537 HGNC:HGNC:11582 EMBL:AK296185
IPI:IPI00922443 SMR:B7Z3P1 STRING:B7Z3P1 Ensembl:ENST00000543662
UCSC:uc010pxr.1 Uniprot:B7Z3P1
Length = 578
Score = 250 (93.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 75/229 (32%), Positives = 112/229 (48%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G V G W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R +K+NFG+ F+ A+ +YV D R+ E++ N P +E +GFD + ++Q
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRK--EQIVTIGNKP-VETIGFDSIMKQQ 123
Query: 303 NT-NKLP---IPN-------DTSGVMEQIFPQGHIHTLTLG-NMGYIWADILKL------ 344
+ +KL + N + GV E P +I + L N+ W +++ +
Sbjct: 124 SQLSKLQEVSLRNCAVSCAGEKGGVAEAC-P--NIRKVDLSKNLLSSWDEVIHIADQLRH 180
Query: 345 --LANFPVTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNA 391
+ N LK PS + T G S L+ L L + I W E +A
Sbjct: 181 LEVLNVSENKLKFPSGSVLT-----GTLSVLKVLVLNQTGIT-WAEAHA 223
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 51/162 (31%), Positives = 73/162 (45%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS N L + + L L L L + S P + F L + +
Sbjct: 308 LDLSSNQLIDENQL-YLIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVN 366
Query: 84 EDFVKEGSLLHYLPKLSSLRFT---KNPILAEERVV-SSREKTIARLGGLKLLNGSAIER 139
++ + + S + L KL SLR +NP+ E++ ++R IA +G LK LN I
Sbjct: 367 DNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEILP 426
Query: 140 QERQGSEYDYIKEFGAVWLD-------EKRRA--EFLEANPR 172
+ER+ +E DY K FG W EK R EFL A+PR
Sbjct: 427 EERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPR 468
Score = 94 (38.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 40/136 (29%), Positives = 66/136 (48%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL-RIRLKSSSAP 63
VS AG+ + +A P I +DLS+NLL+SW V I QL+HL LN+ +LK S
Sbjct: 139 VSCAGEKGG-VAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVLNVSENKLKFPSGS 197
Query: 64 AHSYLAEVVFFVHLGRT--LCDEDFVKEGSLLHYLP-KLSSLRFTKNPILAE----ERVV 116
+ V+ + L +T E + G H L + + +F +L + ++
Sbjct: 198 VLTGTLSVLKVLVLNQTGITWAEAHAQCGGSRHGLDMQKDASKFVDLCVLQKCSTSNCII 257
Query: 117 SSREKTIARLGGLKLL 132
S+++ T R+ K+L
Sbjct: 258 SAKDHTSMRMNVAKVL 273
Score = 71 (30.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 339 ADILKLLANFP-VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPN 397
A +L+ +A P + L L SN I + + +++ L L N ++D ++ + LP
Sbjct: 270 AKVLRCVAGCPGLEELYLESNNIFISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPR 329
Query: 398 LKYLNLASTNLRNIKLNKEG 417
L+ L L+ T + ++ G
Sbjct: 330 LEQLILSDTGISSLHFPDAG 349
>TAIR|locus:2825339 [details] [associations]
symbol:PFI "AT1G71440" species:3702 "Arabidopsis
thaliana" [GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IGI] [GO:0007021
"tubulin complex assembly" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
GO:GO:0009793 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 HSSP:Q20728
EMBL:BT002403 EMBL:BT008888 EMBL:AK118835 IPI:IPI00529655
RefSeq:NP_565017.1 UniGene:At.35185 UniGene:At.48359
ProteinModelPortal:Q8GRL7 SMR:Q8GRL7 STRING:Q8GRL7 PaxDb:Q8GRL7
PRIDE:Q8GRL7 DNASU:843485 EnsemblPlants:AT1G71440.1 GeneID:843485
KEGG:ath:AT1G71440 TAIR:At1g71440 HOGENOM:HOG000241155
InParanoid:Q8GRL7 OMA:EMYVLSA PhylomeDB:Q8GRL7
ProtClustDB:CLSN2689143 ArrayExpress:Q8GRL7 Genevestigator:Q8GRL7
Uniprot:Q8GRL7
Length = 531
Score = 248 (92.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 79/244 (32%), Positives = 123/244 (50%)
Query: 185 IGLRVCDSEGHR--GTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
IG RV R GT++YVG VEG G W G+DWD + GKH+GS NGV YF S +S
Sbjct: 12 IGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGRSQSS 71
Query: 243 GSFMRRDKLNFGSSFMEALHRKY--VETDNELTVRENVEEVKASINAPFLELVGFDQVH- 299
SF+R L+ G + ++AL +Y + T +E + + + A ++L+G D++
Sbjct: 72 ASFVRSQNLSRGITLLQALELRYRTISTKDE---EDEMYVLSAGNRRVSIQLLGGDKIQD 128
Query: 300 -----EEQNTNKLPIPNDTS-GV---MEQIFPQGHIHTLTLGNMGYIWADILKLLANFP- 349
EE + L +S GV + I P + LT GN+ W +I L P
Sbjct: 129 KLSRFEELTSASLSYLGVSSLGVSSDLGSILPNLKLLDLT-GNLISDWEEIGALCEQLPA 187
Query: 350 VTCLKLPSNRITT-LDSVPGMFSSLEELYLQENNIVDWGEVNALG-SLPNLKYLNLASTN 407
+T L L N +++ + S+P + ++ L L N+ + W +V L SLP ++ L+L
Sbjct: 188 LTTLNLSCNSLSSDIKSLPQL-KNIRVLVLN-NSGLSWTQVEILRRSLPGIEELHLMGNM 245
Query: 408 LRNI 411
+ I
Sbjct: 246 ISTI 249
>RGD|1305533 [details] [associations]
symbol:Tbce "tubulin folding cofactor E" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=ISO;ISS] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0014889 "muscle atrophy"
evidence=IEA;ISO] [GO:0048589 "developmental growth"
evidence=IEA;ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302
RGD:1305533 GO:GO:0005737 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706
GO:GO:0014889 GO:GO:0048936 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
OMA:CLRNPLT OrthoDB:EOG41NTKV EMBL:BC089833 IPI:IPI00364903
RefSeq:NP_001012161.1 UniGene:Rn.3547 ProteinModelPortal:Q5FVQ9
SMR:Q5FVQ9 STRING:Q5FVQ9 PhosphoSite:Q5FVQ9 PRIDE:Q5FVQ9
Ensembl:ENSRNOT00000040743 GeneID:361255 KEGG:rno:361255
UCSC:RGD:1305533 InParanoid:Q5FVQ9 NextBio:675707
Genevestigator:Q5FVQ9 GermOnline:ENSRNOG00000029667 Uniprot:Q5FVQ9
Length = 524
Score = 247 (92.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 71/243 (29%), Positives = 118/243 (48%)
Query: 183 DDIGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTS 242
D IG RV + G T+R+ G+V G+W G++WD+ RGKHDGSH G YF T
Sbjct: 8 DVIGRRV-EVNGEYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 243 GSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
GSF+R + +NFG F+ AL ++YV TD ++ + + + ++ +GF+ + ++Q
Sbjct: 67 GSFVRPNIVNFGEDFLTALKKRYVLTDGP---DDDEKSCSLKVGSKQVQTIGFEHITKKQ 123
Query: 303 NTNKLPIPNDTS------------GVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFP- 349
+ +L D S G + + P + L+ N+ W +++ +
Sbjct: 124 S--QLRSLQDISLWKCAVSCAGERGRIAEACPNIRVVDLSK-NLLSTWDEVILIAEQLKD 180
Query: 350 VTCLKLPSNRITTLDSVPGM---FSSLEELYLQENNIVDWGEV-NALGSLPNLKYLNLAS 405
+ L L N++ P + FS+L+ L L + I W EV + S P L+ L L S
Sbjct: 181 LEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGIT-WTEVLHCAPSWPVLQELYLKS 239
Query: 406 TNL 408
+
Sbjct: 240 NGI 242
Score = 137 (53.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 48/141 (34%), Positives = 68/141 (48%)
Query: 45 LKHLRHLNLR-IRLKSSSAPAHSYLAEVVFFVHLGRTLCDEDFVKEGSLLHYLPKLSSLR 103
L L HL L I L S P + F L + +++ + E S ++ L KL SL+
Sbjct: 277 LPRLEHLLLSDIGLSSIHFPDAEIGCKTSMFPALTYLIVNDNQISEWSFINELDKLQSLQ 336
Query: 104 F---TKNPILAEERVVSSREKTIARLGGLKLLNGSAIERQERQGSEYDYIKEFGAVWL-- 158
+NP+ ++ + E IA++G LK LN I +ER+G+E DY K FG W
Sbjct: 337 ALSCARNPLTKGDK---AEEIIIAKIGQLKTLNRCQILPEERRGAELDYRKAFGKEWRKA 393
Query: 159 ------DEKR-RAEFLEANPR 172
D R AEFL A+PR
Sbjct: 394 GGHPDPDRNRPSAEFLSAHPR 414
>UNIPROTKB|F1NVX8 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 Pfam:PF01302 GO:GO:0000226 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053
GeneTree:ENSGT00530000063405 GO:GO:0007023 OMA:CLRNPLT
EMBL:AADN02051948 EMBL:AADN02051947 IPI:IPI00583476
Ensembl:ENSGALT00000022606 Uniprot:F1NVX8
Length = 526
Score = 247 (92.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 78/244 (31%), Positives = 116/244 (47%)
Query: 180 VMEDDIGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
V D +G RV C +E GT+RYVGSV T GVW G++WD RGKHDG++ G +YF
Sbjct: 2 VPADALGRRVLCGTE--YGTVRYVGSVSPTAGVWLGVEWDDPQRGKHDGTYEGKQYFKCR 59
Query: 239 STTSGSFMRRDKLNFGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQV 298
GSF+R +K NFG F+ A+ +Y NE +N E +E VG D +
Sbjct: 60 HPRGGSFIRPNKANFGVDFLTAVKGRYGL--NEKQDAQNGIENTCVFGKKTVEFVGRDSI 117
Query: 299 HEEQNT-NKL------PIPNDTSGVMEQIFPQ-GHIHTLTLG-NMGYIWADILKLLANFP 349
++Q+ ++L +G E+I +I + L N+ W ++ + + P
Sbjct: 118 EKKQSQLHRLVHISVHECAVSHAGQKEEISGTCPNIRHIDLSKNLVAYWDTVIDIASQVP 177
Query: 350 -VTCLKLPSNRI---TTLDSVPGMFSSLEELYLQENNIVDWGEVNALG-SLPNLKYLNLA 404
+ L + N++ +T S F L L L + I W EV P L+ L L
Sbjct: 178 NLETLDISGNKMKFSSTSISASSAFPKLTTLALNQTGIT-WTEVLLCAPGWPVLEELYLT 236
Query: 405 STNL 408
S N+
Sbjct: 237 SNNI 240
Score = 136 (52.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 51/162 (31%), Positives = 77/162 (47%)
Query: 25 LDLSRNLLASWFAVGEITCQLKHLRHLNLRIR-LKSSSAPAHSYLAEVVFFVHLGRTLCD 83
LDLS NLL + + L L L L + S P + + F L +
Sbjct: 256 LDLSNNLLLDGSQL-HLIGHLPRLEQLILTNNGISSVHFPDAEFGCKTKMFPSLKHLAIN 314
Query: 84 EDFVKEGSLLHYLPKLSSLRFTK---NPIL-AEERVVSSREKTIARLGGLKLLNGSAIER 139
++ + + S ++ L KL SL+ + NP++ E+ + R+ IA++ L++LN S I
Sbjct: 315 DNKISQWSSINELDKLPSLQVLECRNNPLMDTEKNPETLRQLIIAKISQLEVLNKSQIFP 374
Query: 140 QERQGSEYDYIKEFGAVWL------DEKRRA---EFLEANPR 172
ER+G+E DY K FG WL D R EFL A+PR
Sbjct: 375 DERRGAELDYRKIFGKEWLAAGGHWDPARNKPSEEFLAAHPR 416
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 70/303 (23%), Positives = 127/303 (41%)
Query: 136 AIERQERQGSEYDYIKEFGAV------WL----DEKRRAEFLEANPRVGDNYFQVMEDDI 185
A+ R+ G+EY ++ G+V WL D+ +R + G YF+
Sbjct: 6 ALGRRVLCGTEYGTVRYVGSVSPTAGVWLGVEWDDPQRGK--HDGTYEGKQYFKCRHPRG 63
Query: 186 GLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSF 245
G + ++ + G + ++ +V+G YG++ E K D + NG++ + F
Sbjct: 64 GSFIRPNKANFG-VDFLTAVKGR----YGLN---E---KQD-AQNGIENTCVFGKKTVEF 111
Query: 246 MRRDKLNFGSSFMEAL-----HR---KYVETDNELT-VRENVEEVKASIN-APFLELVGF 295
+ RD + S + L H + E++ N+ + S N + + V
Sbjct: 112 VGRDSIEKKQSQLHRLVHISVHECAVSHAGQKEEISGTCPNIRHIDLSKNLVAYWDTV-I 170
Query: 296 DQVHEEQNTNKLPIPND------TSGVMEQIFPQGHIHTLTLGNMGYIWADILKLLANFP 349
D + N L I + TS FP+ + TL L G W ++L +P
Sbjct: 171 DIASQVPNLETLDISGNKMKFSSTSISASSAFPK--LTTLALNQTGITWTEVLLCAPGWP 228
Query: 350 VTC-LKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNL 408
V L L SN IT L+ + +L+ L L N ++D +++ +G LP L+ L L + +
Sbjct: 229 VLEELYLTSNNITALERPDNVLQTLKLLDLSNNLLLDGSQLHLIGHLPRLEQLILTNNGI 288
Query: 409 RNI 411
++
Sbjct: 289 SSV 291
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL---RIRLKSSS 61
VS+AG+ +EI P I +DLS+NL+A W V +I Q+ +L L++ +++ S+S
Sbjct: 137 VSHAGQK-EEISGTCPNIRHIDLSKNLVAYWDTVIDIASQVPNLETLDISGNKMKFSSTS 195
Query: 62 APAHSYLAEVVFFV--HLGRTLCDEDFVKEGSLLHYLPKLSSLRFTKNPILAEERVVSSR 119
A S ++ G T + G P L L T N I A ER +
Sbjct: 196 ISASSAFPKLTTLALNQTGITWTEVLLCAPG-----WPVLEELYLTSNNITALERPDNVL 250
Query: 120 EKT-IARLGGLKLLNGSAI 137
+ + L LL+GS +
Sbjct: 251 QTLKLLDLSNNLLLDGSQL 269
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 329 LTLGNMGYIWADILKLLANFP-VTCLKLPSNRITTL---DSVPG----MFSSLEELYLQE 380
L L N + L L+ + P + L L +N I+++ D+ G MF SL+ L + +
Sbjct: 256 LDLSNNLLLDGSQLHLIGHLPRLEQLILTNNGISSVHFPDAEFGCKTKMFPSLKHLAIND 315
Query: 381 NNIVDWGEVNALGSLPNLKYLNLASTNLRNIKLNKE 416
N I W +N L LP+L+ L + L + + N E
Sbjct: 316 NKISQWSSINELDKLPSLQVLECRNNPLMDTEKNPE 351
>WB|WBGene00019503 [details] [associations]
symbol:K07H8.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0008340 GO:GO:0009792
GO:GO:0071688 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00530000063405 OMA:CLRNPLT EMBL:FO081300 PIR:T16278
PIR:T33025 RefSeq:NP_501395.1 ProteinModelPortal:Q20068 SMR:Q20068
STRING:Q20068 PaxDb:Q20068 EnsemblMetazoa:K07H8.1 GeneID:177624
KEGG:cel:CELE_K07H8.1 UCSC:K07H8.1 CTD:177624 WormBase:K07H8.1
HOGENOM:HOG000016489 InParanoid:Q20068 NextBio:897660
Uniprot:Q20068
Length = 493
Score = 190 (71.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 56/173 (32%), Positives = 87/173 (50%)
Query: 198 TIRYVGSVEGTQGV-WYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFGSS 256
T+RY+G V+G W G++WD TRGKHDG G +YF T GS M+ + + +
Sbjct: 15 TVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNGGSLMKHEIVPKPTD 74
Query: 257 FMEALHRKYVETDNELTVRENVE-EVKASINAPFLELVGFDQVHEEQ-NTNKL---PIPN 311
+ + +Y+E E+VE E++ + + +EL+G DQ +Q N KL + N
Sbjct: 75 LLFEIKDRYIE-------EESVETEIELAQSNKKIELIGMDQTAAKQSNIEKLINIVLDN 127
Query: 312 DTSGVMEQI-FPQGHI-HTLTL-GNMGYIWADILKLLANFP-VTCLKLPSNRI 360
+ G PQ + L L GN+ Y W + ++L FP + L L NR+
Sbjct: 128 RSVGFPPSSDSPQFILCRELNLYGNLLYKWKTVRQILEYFPRIQELNLRRNRM 180
Score = 87 (35.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 348 FP-VTCLKLPSNRITTLDSVPGM--FSSLEELYLQENNIVDWGEVNALGSLPNLKYL 401
FP +T L + + IT+L+ G F LE L ++ N+IV+W VN++ SL +LK L
Sbjct: 271 FPNLTQLSVANCGITSLNGFDGSIKFPKLEYLNIKRNSIVEWKSVNSIRSLKSLKRL 327
Score = 75 (31.5 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 350 VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNL 408
+T L L N TLDS+ G F +L +L + I + P L+YLN+ ++
Sbjct: 251 LTSLDLEDNPFKTLDSIHGTFPNLTQLSVANCGITSLNGFDGSIKFPKLEYLNIKRNSI 309
Score = 51 (23.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 344 LLANFPVTCLKLP-SNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLN 402
+L FP T + N +T + S L L L++N ++ G+ PNL L+
Sbjct: 221 ILLRFPSTSDVVAFGNDLTRFSVSEAVSSRLTSLDLEDNPFKTLDSIH--GTFPNLTQLS 278
Query: 403 LASTNLRNI 411
+A+ + ++
Sbjct: 279 VANCGITSL 287
>UNIPROTKB|F1RGX1 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0014889 "muscle atrophy" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0000226 GO:GO:0008344 GO:GO:0009791
GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:CU468332
Ensembl:ENSSSCT00000011118 OMA:KLPSILY Uniprot:F1RGX1
Length = 102
Score = 203 (76.5 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 210 GVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFGSSFMEALHRKYVETD 269
G+W G++WD+ RGKHDGSH G YF T GSF+R +K+NFG F+ A+ +YV D
Sbjct: 12 GLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGVDFLTAIKNRYVLED 71
Query: 270 NELTVRENVEEVKASINAPFLELVGFDQVHEEQ 302
E E+ N P +E +GFD V ++Q
Sbjct: 72 EP--EEEEKEQTVIIGNKP-VETIGFDSVVKQQ 101
>UNIPROTKB|G4NCM1 [details] [associations]
symbol:MGG_00378 "Tubulin-specific chaperone E"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CM001235 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
RefSeq:XP_003718699.1 ProteinModelPortal:G4NCM1
EnsemblFungi:MGG_00378T0 GeneID:2674874 KEGG:mgr:MGG_00378
Uniprot:G4NCM1
Length = 616
Score = 191 (72.3 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 46/118 (38%), Positives = 68/118 (57%)
Query: 185 IGLRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF--WTHSTTS 242
+G R+ +G TIR++G V GT G W G++WD +RGKHDG H GV+YF + S T+
Sbjct: 7 VGQRL-SFDGALCTIRFIGDVAGTSGTWLGVEWDDPSRGKHDGCHKGVRYFACLSRSPTA 65
Query: 243 GSFMRRDKLNFGS-SFMEALHRKYV-ETDNELTVRENVEEVKASINAPFLELVGFDQV 298
SF+R + + SF+EA+ KY E + R +E+ I+ E VGFD++
Sbjct: 66 ASFVRPTRPSDPPRSFIEAVRDKYADEPVGDAASRP--KEIV--ISGKVAEEVGFDKI 119
Score = 45 (20.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 350 VTCLKLPSNRITTL-DSVP-GMFSSLEELYLQENNI 383
+T L L N +L D P SSL L L+ NNI
Sbjct: 268 LTTLSLEFNEFGSLSDLAPLATLSSLRNLILKGNNI 303
>CGD|CAL0005987 [details] [associations]
symbol:orf19.2921 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 CGD:CAL0005987 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 eggNOG:NOG245706
InterPro:IPR025875 Pfam:PF12799 EMBL:AACQ01000084
RefSeq:XP_715575.1 ProteinModelPortal:Q5A198 STRING:Q5A198
GeneID:3642819 KEGG:cal:CaO19.2921 Uniprot:Q5A198
Length = 502
Score = 182 (69.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 64/241 (26%), Positives = 114/241 (47%)
Query: 188 RVCDSEGHRGTIRYVGS--VEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSF 245
RV + + GTIRY+G+ V GT V GI+WD +RGK++G NG++YF T SG+F
Sbjct: 10 RVSTIDNYLGTIRYIGNLPVWGTNTVALGIEWDDPSRGKNNGDLNGIQYFTPKVTGSGTF 69
Query: 246 MRRDK--LN-FGSSFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGFDQV---H 299
++ LN SF++ +H Y++T+ + +N++ +E +G+D++ H
Sbjct: 70 IKSSNRSLNHIRKSFVQIIHENYLDTEYKT---KNIQ-----FGIKTVEELGWDKLNKFH 121
Query: 300 EE-QNTNKLPIPNDTSGVM------EQIFPQ-GHIHTLTLG-NMGYIWADILKLLANFP- 349
+N + L + + +Q+F + ++ L L N+ +I K++ N P
Sbjct: 122 SNLRNLDSLTLDYCLINIAYHDNEDKQLFDELVNLTNLELSCNLFTDVNEICKIIDNIPS 181
Query: 350 VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIVDWGEVNALGSLPNLKYLNLASTNLR 409
+T L + NR + + + L L + + PNLK L ++ N
Sbjct: 182 LTSLNINGNRFSQFSQEQRTHNGIVSLKLSSTMMSTSMLEKLIKKFPNLKELYISGNNYC 241
Query: 410 N 410
N
Sbjct: 242 N 242
>SGD|S000000809 [details] [associations]
symbol:PAC2 "Microtubule effector required for tubulin
heterodimer formation" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IGI;ISS] [GO:0007021
"tubulin complex assembly" evidence=IGI] [GO:0072668 "tubulin
complex biogenesis" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 SGD:S000000809 Pfam:PF01302
GO:GO:0005737 GO:GO:0006457 EMBL:BK006939 EMBL:U18778 GO:GO:0005874
GO:GO:0007021 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:U16814 PIR:S50465 RefSeq:NP_010922.1 ProteinModelPortal:P39937
SMR:P39937 DIP:DIP-2342N IntAct:P39937 MINT:MINT-475566
STRING:P39937 PaxDb:P39937 EnsemblFungi:YER007W GeneID:856724
KEGG:sce:YER007W CYGD:YER007w GeneTree:ENSGT00530000063405
OMA:AYGVEWD NextBio:982823 Genevestigator:P39937 GermOnline:YER007W
Uniprot:P39937
Length = 518
Score = 145 (56.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 42/133 (31%), Positives = 70/133 (52%)
Query: 181 MEDDIGLRVCDSEGHRGTIRYVGSVEGTQGVW-YGIDWDSETRGKHDGSHNGVKYFWTHS 239
M +IG R+ G+ TI+++G ++ V YG++WD +RGKH G+ + + YF
Sbjct: 1 MTYEIGDRL-KIGGYFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQI 59
Query: 240 TTSGSFMRRDKLNFGS----SFMEALHRKYVETDNELTVRENVEEVKASINAPFLELVGF 295
SGSF++ K+ +F EAL KY + N N+ ++ SI +E +GF
Sbjct: 60 PNSGSFLKESKIKSPGVRRITFYEALSEKYGGSSN------NINDL--SIGNKRVEGLGF 111
Query: 296 DQVH-EEQNTNKL 307
D+++ +N KL
Sbjct: 112 DELNARNKNYKKL 124
Score = 52 (23.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 370 FSSLEELYLQENNIVDWGEVNALGSLP-NLKYLNLASTNLRNIKL 413
F +L+ L L NN+ G N +P L+ LN++ NL + L
Sbjct: 227 FRTLKMLDLSYNNLTSAGIQNFENEIPCTLEELNISGNNLISFPL 271
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 121 (47.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHG 69
Query: 244 SFMRRDKL 251
F+R+ ++
Sbjct: 70 IFVRQSQI 77
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 121 (47.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHG 69
Query: 244 SFMRRDKL 251
F+R+ ++
Sbjct: 70 IFVRQSQI 77
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHG 69
Query: 244 SFMRRDK 250
F+R+ +
Sbjct: 70 IFVRQSQ 76
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF-TCDEGHG 69
Query: 244 SFMRRDK 250
F+R+ +
Sbjct: 70 IFVRQSQ 76
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 112 (44.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYF 235
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILD-EAKGKNDGTVQGRKYF 62
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/129 (30%), Positives = 63/129 (48%)
Query: 132 LNGSAIERQERQGSEYDYIK--EFGAVWLDEKRRAEFLEANPRVGDNYFQVMEDDIG--- 186
++ A ER RQ + ++K + G + +E R + EA R+ + Q +G
Sbjct: 109 ISPEAYER--RQNTVRSFMKRSKLGP-YNEELRAQQEAEAAQRLSEEKAQASAISVGSRC 165
Query: 187 -LRVCDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSF 245
+R D RGT+ YVG + G W G+ +D E GK+DGS NG +YF + G+F
Sbjct: 166 EVRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYD-EPLGKNDGSVNGKRYFECQAKY-GAF 223
Query: 246 MRRDKLNFG 254
++ + G
Sbjct: 224 VKPSAVTVG 232
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 141 ERQGSEYDYIK--EFGAVWLDEKRRAEFLEANPRVGDNYFQVMEDDIG----LRVCDSEG 194
+RQ + ++K + G + +E+R + EA R+ + Q +G +R
Sbjct: 116 QRQDTVRSFLKRSKLGR-YNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSP 174
Query: 195 HRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMR 247
RGT+ YVG + G W G+ +D E GK+DGS NG +YF + G+F++
Sbjct: 175 RRGTVMYVGLTDFKPGYWIGVRYD-EPLGKNDGSVNGKRYFECQAKY-GAFVK 225
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 132 LNGSAIERQERQGSEYDYIK--EFGAVWLDEKRRAEFLEANPRVGDNYFQVMEDDIGLRV 189
++ A ER RQ + ++K + G + +E R + EA R+ + Q +G R
Sbjct: 109 ISPEAYER--RQNTVRSFMKRSKLGP-YNEELRAQQEAEAAQRLSEEEAQASAISVGSR- 164
Query: 190 CD--SEG---HRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGS 244
C+ + G HRGT+ YVG + G W G+ + E GK+DGS NG +YF + G+
Sbjct: 165 CEVRAPGQSLHRGTVMYVGLTDFKPGYWVGVRY-GEPLGKNDGSVNGKRYFECQARY-GA 222
Query: 245 FMRRDKLNFG 254
F++ + G
Sbjct: 223 FVKPAAVTVG 232
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 122 (48.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 145 SEYDYIKEFGAVW-LDEKRRAEF-LEANPRVGDNYFQVMEDDI--GLRVCDSE-GH-RGT 198
SE DY K + EKR ++ + A + +NY + + +I G R C E G RG
Sbjct: 117 SEEDYAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDR-CQVEPGEKRGM 175
Query: 199 IRYVGSVEGT-QGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFG 254
++YVG E G W GI +D E GKHDG G ++F G +R DK+ G
Sbjct: 176 VKYVGRAESLGPGYWVGIQYD-EPLGKHDGMVKGTRFFEC-PRLQGGMVRPDKVKVG 230
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 141 ERQGSEYDYIKEFGAVWLDEKRRAEF-LEANPRVGDNYFQVMEDDIGLRVCD--SEGH-- 195
+RQ S ++K +E+ RA+ E++ R+ + Q +G R C+ + G
Sbjct: 116 QRQNSVRSFLKRNKLGRYNEEERAQREAESSQRLIEEEAQASAIPVGSR-CEVRAPGQPP 174
Query: 196 -RGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNFG 254
RGT+ YVG + G W G+ +D E GK+DGS NG +YF + G+F++ + G
Sbjct: 175 RRGTVMYVGLTDFKPGYWIGVRYD-EPLGKNDGSVNGKRYFECQAKY-GAFVKPSVVTVG 232
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 120 (47.3 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 38/121 (31%), Positives = 61/121 (50%)
Query: 140 QERQGSEYDYIKEFGAVWLDEKRRAEF-LEANPRVGDNYFQVMEDDIGLRVCD--SEGH- 195
++RQ S ++K +E+ RA+ E + R+ + Q +G R C+ + G
Sbjct: 115 EQRQDSIRSFLKRNKLGRFNEEERAQQEAENSQRLIEEEAQASTIPVGSR-CEVRTPGQP 173
Query: 196 --RGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSGSFMRRDKLNF 253
RGT+ YVG + G W GI +D E GK+DGS NG +YF + G+F++ +
Sbjct: 174 PRRGTVMYVGLTDFKPGYWIGIRYD-EPLGKNDGSVNGKRYFECQAKY-GAFVKPSVVTV 231
Query: 254 G 254
G
Sbjct: 232 G 232
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 115 (45.5 bits), Expect = 0.00030, P = 0.00030
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 181 MEDDIGLRVCDSEGHRGTIRYVGSVE--GTQGVWYGIDWDSETRGKHDGSHNGVKYFWTH 238
++ ++ R C + GTIRY+G V +W G+++D E GK+DG+ +G +YF
Sbjct: 150 LQKNLNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFD-EPVGKNDGTVSGKRYF-NA 207
Query: 239 STTSGSFMRRDKLNFG 254
GSF+R ++ G
Sbjct: 208 KNKHGSFLRSSEVEVG 223
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 185 IGLRV-CDSEGHRGTIRYVGSVEGTQGVWYGIDWDSETRGKHDGSHNGVKYFWTHSTTSG 243
+G RV +GHRGT+ YVG+ G W G+ D E +GK+DG+ G KYF T G
Sbjct: 30 VGSRVEVIGKGHRGTVAYVGATLXATGKWVGVILD-EAKGKNDGTVQGRKYF-TCEENHG 87
Query: 244 SFMRRDKL 251
F+R+ ++
Sbjct: 88 IFVRQSQI 95
>ZFIN|ZDB-GENE-040426-1719 [details] [associations]
symbol:tbcela "tubulin folding cofactor E-like a"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000626 SMART:SM00213
ZFIN:ZDB-GENE-040426-1719 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00530000063405
EMBL:BX548078 IPI:IPI00851429 Ensembl:ENSDART00000124092
Ensembl:ENSDART00000135770 Uniprot:F1QNT3
Length = 448
Score = 89 (36.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 326 IHTLTLGNMGYIWADILKLLANFP-VTCLKLPSNRITTLDSVPGMFSSLEELYLQENNIV 384
I L N W + P + L L N TT+ +L L++ +NN+
Sbjct: 152 IRRFVLNNTQVSWDTVHTFTQEMPELEELFLCLNEYTTVTLAAMPCPTLRLLHITDNNLH 211
Query: 385 DWGEVNALGSL-PNLKYLNLASTNLRNIKLNKE 416
+W EV +GS+ P L L +A+ NL +I+ + E
Sbjct: 212 EWNEVRKIGSMFPALDTLVMANNNLNSIQESGE 244
Score = 71 (30.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 5 VSNAGKTHDEIEQAVPFIEDLDLSRNLLASWFAVGEITCQLKHLRHLNL 53
+S+AG EI + +LDLS N L W + +I + +L LNL
Sbjct: 84 ISHAGD-QGEIAAFCAHVVELDLSHNKLQDWHEISKIVSNVPNLEFLNL 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 421 421 0.00083 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 617 (66 KB)
Total size of DFA: 275 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 35.55u 0.07s 35.62t Elapsed: 00:00:33
Total cpu time: 35.55u 0.07s 35.62t Elapsed: 00:00:34
Start: Thu Aug 15 11:30:48 2013 End: Thu Aug 15 11:31:22 2013