BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9365
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18583|SON_HUMAN Protein SON OS=Homo sapiens GN=SON PE=1 SV=4
Length = 2426
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 1 MPGQFTGSTEVRILTPQELA-AGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLG 59
+PGQFTGST V++LT ++LA G+QAW +K+QF+ AAPV+GGMG L++KMGW+ GEGLG
Sbjct: 2266 IPGQFTGSTGVQVLTQEQLANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLG 2325
Query: 60 KNKEGTVQPLSLDIKFDRRGLVS 82
KNKEG +P+ +D K DR+GLV+
Sbjct: 2326 KNKEGNKEPILVDFKTDRKGLVA 2348
>sp|Q9QX47|SON_MOUSE Protein SON OS=Mus musculus GN=Son PE=1 SV=2
Length = 2444
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 1 MPGQFTGSTEVRILTPQELA-AGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLG 59
+PGQFTGST V++LT ++LA G+QAW +K+QF+ AAPV+GGMG L++KMGW+ GEGLG
Sbjct: 2284 IPGQFTGSTGVQVLTQEQLANTGAQAWIKKDQFLRAAPVTGGMGAVLMRKMGWREGEGLG 2343
Query: 60 KNKEGTVQPLSLDIKFDRRGLVS 82
KNKEG +P+ +D K DR+GLV+
Sbjct: 2344 KNKEGNKEPILVDFKTDRKGLVA 2366
>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 OS=Danio rerio GN=ccdc75
PE=2 SV=1
Length = 262
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 29 KEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
+E ++++ S G LLQKMG++ G+GLGK G V+P+ L+IK DR G+
Sbjct: 60 REAALQSSIGSQNKGFALLQKMGYKAGQGLGKEGAGRVEPVPLNIKTDRGGI 111
>sp|Q28H71|ZGPAT_XENTR Zinc finger CCCH-type with G patch domain-containing protein
OS=Xenopus tropicalis GN=zgpat PE=2 SV=1
Length = 514
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 19 LAAGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
L AGS A QF + G+G LL +MG++ G+GLG+N EG V+P+
Sbjct: 295 LGAGSAGSAHSSQFGGWEAHTRGIGSKLLARMGYEIGKGLGRNAEGRVEPI 345
>sp|Q6C233|SQS1_YARLI Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 812
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 42 MGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
+G LLQKMGW GEGLG G +P+ +K +RG+
Sbjct: 772 IGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGI 810
>sp|Q6DI35|TFP11_DANRE Tuftelin-interacting protein 11 OS=Danio rerio GN=tfip11 PE=1 SV=1
Length = 832
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 41 GMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIK 74
G+G LLQKMG+ PG+GLGKN +G V P+ ++
Sbjct: 150 GIGQKLLQKMGYVPGKGLGKNAQGIVNPIEAKLR 183
>sp|A2A6A1|GPTC8_MOUSE G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8
PE=2 SV=1
Length = 1505
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
S +G LLQK GW+ G+GLGK+ +G P+ + +K+D G+
Sbjct: 40 SDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGM 81
>sp|Q9UKJ3|GPTC8_HUMAN G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8
PE=1 SV=2
Length = 1502
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
S +G LLQK GW+ G+GLGK+ +G P+ + +K+D G+
Sbjct: 40 SDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGM 81
>sp|A4UMC6|TFP11_MONDO Tuftelin-interacting protein 11 OS=Monodelphis domestica GN=TFIP11
PE=2 SV=1
Length = 834
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG+GLGKN +G + P+
Sbjct: 148 TKGIGQKLLQKMGYVPGKGLGKNAQGIINPI 178
>sp|Q66J74|TFP11_XENLA Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2
SV=1
Length = 824
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 145 TKGIGQKLLQKMGYMPGRGLGKNAQGIIAPI 175
>sp|Q6DF57|CCD75_XENTR Coiled-coil domain-containing protein 75 OS=Xenopus tropicalis
GN=ccdc75 PE=2 SV=1
Length = 261
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 43 GMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
G LLQKMG++ G+ LGK +G V+P+ L+IK R G+
Sbjct: 74 GFALLQKMGYKKGQALGKKGDGIVEPIPLNIKTGRSGI 111
>sp|Q5R5K8|TFP11_PONAB Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|A1XD93|TFP11_PANTR Tuftelin-interacting protein 11 OS=Pan troglodytes GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|A1XD94|TFP11_MACMU Tuftelin-interacting protein 11 OS=Macaca mulatta GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q9UBB9|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q29RR5|TFP11_BOVIN Tuftelin-interacting protein 11 OS=Bos taurus GN=TFIP11 PE=2 SV=2
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q9ERA6|TFP11_MOUSE Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1
Length = 838
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 150 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 180
>sp|A1XD97|TFP11_CANFA Tuftelin-interacting protein 11 OS=Canis familiaris GN=TFIP11 PE=2
SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q5U2Y6|TFP11_RAT Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=2
SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|A1XD95|TFP11_MACFA Tuftelin-interacting protein 11 OS=Macaca fascicularis GN=TFIP11
PE=2 SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1
Length = 836
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|A4UMC5|TFP11_RABIT Tuftelin-interacting protein 11 OS=Oryctolagus cuniculus GN=TFIP11
PE=2 SV=1
Length = 837
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 149 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 179
>sp|Q5ZII9|TFP11_CHICK Tuftelin-interacting protein 11 OS=Gallus gallus GN=TFIP11 PE=2
SV=1
Length = 827
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ PG GLGKN +G + P+
Sbjct: 145 TKGIGQKLLQKMGYVPGRGLGKNAQGIINPI 175
>sp|O94585|YQ7D_SCHPO Meiotically up-regulated protein C1442.13c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1442.13c PE=1
SV=3
Length = 187
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 35 AAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
A ++ G G LL+ MGW G+GLG +G V P+ +K +++GL
Sbjct: 141 APAINNGKGKQLLEMMGWSRGKGLGSENQGMVDPVVAVVKNNKQGL 186
>sp|Q3UFS4|CCD75_MOUSE Coiled-coil domain-containing protein 75 OS=Mus musculus GN=Ccdc75
PE=2 SV=2
Length = 262
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 43 GMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
G LLQKMG++ G+ LGK+ +G V+P+ L++K + G+
Sbjct: 73 GFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGI 110
>sp|Q2KI19|CCD75_BOVIN Coiled-coil domain-containing protein 75 OS=Bos taurus GN=CCDC75
PE=2 SV=2
Length = 260
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 43 GMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
G LLQKMG++ G+ LGK+ +G V+P+ L++K + G+
Sbjct: 73 GFALLQKMGYKSGQALGKSGDGIVEPIPLNVKTGKSGI 110
>sp|Q9UTK6|YKR3_SCHPO G-patch domain-containing protein C1486.03 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1486.03c PE=3
SV=1
Length = 797
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL-VSKEELPPQRK 91
+ G G +L+KMG++ G+GLG N EG +P+ ++ +R GL +E QRK
Sbjct: 115 TTGFGAKMLEKMGYKQGQGLGANAEGIAEPVQSKLRPERVGLGAVRERTEKQRK 168
>sp|P21407|VPRT_SMRVH Protease OS=Squirrel monkey retrovirus GN=pro PE=4 SV=1
Length = 323
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 26 WAR----KEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGLV 81
W R + + V +P M L Q G+ PG+GLGKN +G QP+++ K D+ GL
Sbjct: 260 WGRDILSQMKLVMCSPNDTVMTQMLSQ--GYLPGQGLGKNNQGITQPITITPKKDKTGLG 317
Query: 82 SKEELP 87
+ LP
Sbjct: 318 FHQNLP 323
>sp|Q8VDM1|ZGPAT_MOUSE Zinc finger CCCH-type with G patch domain-containing protein OS=Mus
musculus GN=Zgpat PE=2 SV=1
Length = 511
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 3 GQFTGSTEVRILTPQELAAGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNK 62
G + S+ R++ P + G+ + A F + G+G LL KMG++ G+GLG++
Sbjct: 281 GDASDSSYARVVEPSTVDTGTCSSA----FAGWEVHTRGIGSKLLVKMGYEFGKGLGRHA 336
Query: 63 EGTVQPL 69
EG V+P+
Sbjct: 337 EGRVEPI 343
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
S +G +LQ MGW+ G GLG+ K+G V P+ + GL
Sbjct: 858 SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGL 899
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
S +G +LQ MGW+ G GLG+ K+G V P+ + GL
Sbjct: 858 SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGL 899
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
S +G +LQ MGW+ G GLG+ K+G V P+ + GL
Sbjct: 780 SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGL 821
>sp|A8XYX3|MTR1B_CAEBR Inactive cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
1B OS=Caenorhabditis briggsae GN=CBG20907 PE=3 SV=2
Length = 846
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 47 LQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
+++MG++ GEGLGKNK+G +P+++ + + GL
Sbjct: 52 MERMGYKAGEGLGKNKQGIQEPIAISFREGKAGL 85
>sp|Q8N954|CCD75_HUMAN Coiled-coil domain-containing protein 75 OS=Homo sapiens GN=CCDC75
PE=1 SV=3
Length = 259
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 43 GMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
G LLQKMG++ G+ LGK+ G V+P+ L+IK + G+
Sbjct: 73 GFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGI 110
>sp|A8XYX2|MTR1A_CAEBR Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1A
OS=Caenorhabditis briggsae GN=CBG20906 PE=3 SV=2
Length = 874
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 30 EQFVEAAPVSG--GMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
E F AAP + ++++MG++ GEGLGKNK+G +P++L + + GL
Sbjct: 49 EDFETAAPPTKQKTKAEEMMERMGYKAGEGLGKNKQGIQEPVALSTQRGKTGL 101
>sp|A6ZRL6|SQS1_YEAS7 Protein SQS1 OS=Saccharomyces cerevisiae (strain YJM789) GN=SQS1
PE=3 SV=1
Length = 767
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 42 MGMHLLQKMGWQPGEGLG-KNKEGTVQPLSLDIKFDRRGLVSKE 84
+G +L+K+GW+ GEGLG + +G +P+ IK +R GL E
Sbjct: 723 IGRRMLEKLGWKSGEGLGIQGNKGISEPIFAKIKKNRSGLRHSE 766
>sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein
OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1
Length = 443
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 27 ARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL-SLDIKFDRRGL 80
A KE +A + +G LL KMGW+ GEG+G +++G P+ + D+K + G+
Sbjct: 348 ATKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNNLGV 402
>sp|P53866|SQS1_YEAST Protein SQS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SQS1 PE=1 SV=1
Length = 767
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 42 MGMHLLQKMGWQPGEGLG-KNKEGTVQPLSLDIKFDRRGLVSKE 84
+G +L+K+GW+ GEGLG + +G +P+ IK +R GL E
Sbjct: 723 IGRRMLEKLGWKSGEGLGIQGNKGISEPIFAKIKKNRSGLRHSE 766
>sp|Q8N5A5|ZGPAT_HUMAN Zinc finger CCCH-type with G patch domain-containing protein
OS=Homo sapiens GN=ZGPAT PE=1 SV=3
Length = 531
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 41 GMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
G+G LL KMG++ G+GLG++ EG V+P+
Sbjct: 335 GIGSRLLTKMGYEFGKGLGRHAEGRVEPI 363
>sp|Q5U4Z3|ZGPAT_XENLA Zinc finger CCCH-type with G patch domain-containing protein
OS=Xenopus laevis GN=zgpat PE=2 SV=1
Length = 524
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 41 GMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
G+G LL +MG++ G+GLG+N EG V+P+
Sbjct: 328 GIGSKLLVRMGYEFGKGLGRNAEGRVEPI 356
>sp|Q09806|YAB4_SCHPO Uncharacterized protein C2G11.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2G11.04 PE=4 SV=1
Length = 301
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 19 LAAGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDI 73
+AA + +K V A + + +LQ+ GW+ G+GLG++ +G + PL ++I
Sbjct: 232 IAAEDLDFFKKSPPVPAISKKENVALKMLQRCGWKEGQGLGQHNQGIINPLHVEI 286
>sp|P63121|VPK5_HUMAN HERV-K_19p13.11 provirus ancestral Pro protein OS=Homo sapiens PE=3
SV=1
Length = 156
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 36 APVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
AP+ ++ KMG+ PG+GLGKN++G P+ I +R G+
Sbjct: 108 APLYSPTSQKIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGI 152
>sp|Q0IIX9|TFP11_XENTR Tuftelin-interacting protein 11 OS=Xenopus tropicalis GN=tfip11
PE=2 SV=2
Length = 825
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 39 SGGMGMHLLQKMGWQPGEGLGKNKEGTVQPL 69
+ G+G LLQKMG+ G GLGKN +G + P+
Sbjct: 145 TKGIGQKLLQKMGYVQGRGLGKNAQGIIAPI 175
>sp|P63131|VPK12_HUMAN HERV-K_1q22 provirus ancestral Pro protein OS=Homo sapiens PE=3
SV=1
Length = 156
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 36 APVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
AP+ ++ KMG+ PG+GLGKN++G P+ I +R G+
Sbjct: 108 APLYSPTSQKIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGI 152
>sp|P10265|VPK10_HUMAN HERV-K_5q33.3 provirus ancestral Pro protein OS=Homo sapiens PE=1
SV=2
Length = 156
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 36 APVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
AP+ ++ KMG+ PG+GLGKN++G P+ I +R G+
Sbjct: 108 APLYSPTSQKIMTKMGYIPGKGLGKNEDGIKVPVEAKINQEREGI 152
>sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens
GN=PINX1 PE=1 SV=2
Length = 328
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 24 QAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
Q WA Q + G +L+KMGW G+GLG ++G + + +K + GL
Sbjct: 11 QKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGL 67
>sp|Q61858|GPAN1_MOUSE G patch domain and ankyrin repeat-containing protein 1 OS=Mus
musculus GN=Gpank1 PE=2 SV=2
Length = 372
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 43 GMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGLVSKEELPPQ 89
G LL + GW+PG GLG EG P+ +K D+ GL + PPQ
Sbjct: 275 GFRLLLRGGWEPGMGLGPRGEGRANPIPTILKRDQEGLGYRS--PPQ 319
>sp|Q6BUE3|PXR1_DEBHA Protein PXR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS
767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PXR1 PE=3
SV=1
Length = 316
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 42 MGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGLVSK 83
G L++MGW+PG+GLG + T + + IK D GL SK
Sbjct: 28 FGHQYLERMGWKPGKGLGLVEHATTSHVKVSIKDDNLGLGSK 69
>sp|Q5PPF5|ZGPAT_RAT Zinc finger CCCH-type with G patch domain-containing protein
OS=Rattus norvegicus GN=Zgpat PE=2 SV=1
Length = 507
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 3 GQFTGSTEVRILTPQELAAGSQAWARKEQFVEAAPVSGGMGMHLLQKMGWQPGEGLGKNK 62
G + S+ R++ + G+ + A F + G+G LL KMG++ G+GLG++
Sbjct: 277 GDASDSSYARVVEANTVDTGTCSSA----FAGWEVHTRGIGSKLLVKMGYEFGKGLGRHA 332
Query: 63 EGTVQPL 69
EG V+P+
Sbjct: 333 EGRVEPI 339
>sp|P63124|VPK9_HUMAN HERV-K_5q13.3 provirus ancestral Pro protein OS=Homo sapiens PE=3
SV=1
Length = 156
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 36 APVSGGMGMHLLQKMGWQPGEGLGKNKEGTVQPLSLDIKFDRRGL 80
AP+ ++ KMG+ PG+GLGKN++G P+ I R G+
Sbjct: 108 APLYSPTSQKIMTKMGYIPGKGLGKNEDGIKVPVEAKINQKREGI 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,477,673
Number of Sequences: 539616
Number of extensions: 1619537
Number of successful extensions: 2338
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2178
Number of HSP's gapped (non-prelim): 167
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)