Query psy9368
Match_columns 179
No_of_seqs 15 out of 17
Neff 2.5
Searched_HMMs 13730
Date Fri Aug 16 17:20:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9368.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9368hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v97a2 d.15.4.2 (A:3-92) Xant 8.1 1.2E+02 0.0087 19.9 2.7 27 148-176 4-30 (90)
2 d1bmlc3 d.15.5.1 (C:285-372) S 8.0 76 0.0055 21.4 1.6 10 145-154 78-87 (88)
3 d2dpka1 b.1.27.1 (A:370-502) S 6.7 1.3E+02 0.0092 19.5 2.2 21 145-165 57-77 (133)
4 d1e7ua3 d.15.1.5 (A:143-321) P 6.0 2.7E+02 0.02 20.0 4.0 31 146-176 78-108 (179)
5 d2ia7a1 d.373.1.1 (A:23-133) U 5.3 1.2E+02 0.0086 19.7 1.4 10 146-155 101-110 (111)
6 d2fwua1 b.1.27.1 (A:501-657) S 4.9 1.7E+02 0.012 19.9 2.0 20 146-165 58-77 (157)
7 d2fug71 d.82.2.2 (7:3-129) NAD 4.0 3.3E+02 0.024 19.4 3.1 31 141-171 46-77 (127)
8 d1h8la1 b.3.2.1 (A:305-383) Ca 3.0 2.6E+02 0.019 16.3 1.4 30 147-176 48-77 (79)
9 d1wgra_ d.15.1.5 (A:) Growth f 2.7 5.4E+02 0.039 16.0 3.0 24 141-164 6-29 (100)
10 d1ffva2 d.15.4.2 (A:3-81) Carb 2.5 6.6E+02 0.048 15.6 3.2 28 145-175 1-28 (79)
No 1
>d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.14 E-value=1.2e+02 Score=19.88 Aligned_cols=27 Identities=22% Similarity=0.475 Sum_probs=20.7
Q ss_pred EEEeeccceeeEEEeccCCchhhhhhhhh
Q psy9368 148 ITFYMGQSTQTFSISTLSPRPILLSYLFA 176 (179)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (179)
|+||... +.+.+....|+--||.||-.
T Consensus 4 i~F~lNG--~~~~~~~~~p~~tLl~~LR~ 30 (90)
T d1v97a2 4 LVFFVNG--KKVVEKNADPETTLLAYLRR 30 (90)
T ss_dssp EEEEETT--EEEEETTCCTTCBHHHHHHH
T ss_pred EEEEECC--EEEEEccCCCCCCHHHHHHh
Confidence 7888765 34667788899999999854
No 2
>d1bmlc3 d.15.5.1 (C:285-372) Streptokinase {Streptococcus equisimilis [TaxId: 119602]}
Probab=7.97 E-value=76 Score=21.41 Aligned_cols=10 Identities=50% Similarity=0.999 Sum_probs=8.1
Q ss_pred ceEEEEeecc
Q psy9368 145 RTVITFYMGQ 154 (179)
Q Consensus 145 ~~~~~~~~~~ 154 (179)
..+||.|||.
T Consensus 78 nriitvymgk 87 (88)
T d1bmlc3 78 NRIITVYMGK 87 (88)
T ss_dssp SEEEEEEEEE
T ss_pred ceEEEEEecc
Confidence 4689999995
No 3
>d2dpka1 b.1.27.1 (A:370-502) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=6.72 E-value=1.3e+02 Score=19.50 Aligned_cols=21 Identities=10% Similarity=0.368 Sum_probs=17.4
Q ss_pred ceEEEEeeccceeeEEEeccC
Q psy9368 145 RTVITFYMGQSTQTFSISTLS 165 (179)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~ 165 (179)
...|+|--|+.++++.|..+.
T Consensus 57 ~g~i~F~~Ge~~~~i~V~i~~ 77 (133)
T d2dpka1 57 EGTVVFKPGETQKEIRVGIID 77 (133)
T ss_dssp EEEEEECTTCCEEEEEEEBCC
T ss_pred CCeEEECCCCeEEEEEEEEEc
Confidence 346899999999999998764
No 4
>d1e7ua3 d.15.1.5 (A:143-321) Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=5.99 E-value=2.7e+02 Score=20.00 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=20.7
Q ss_pred eEEEEeeccceeeEEEeccCCchhhhhhhhh
Q psy9368 146 TVITFYMGQSTQTFSISTLSPRPILLSYLFA 176 (179)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (179)
..|.++-+++++||.++.-.----|+..+|.
T Consensus 78 i~V~i~~~~~s~Tf~v~~~~tP~~lI~~~l~ 108 (179)
T d1e7ua3 78 VFIVIHRSTTSQTIKVSADDTPGTILQSFFT 108 (179)
T ss_dssp EEEEEESSSCEEEEEEETTCCHHHHHHHHHH
T ss_pred EEEEEecCCccEEEEECCCCCHHHHHHHHHH
Confidence 4566778888899999876544445554443
No 5
>d2ia7a1 d.373.1.1 (A:23-133) Uncharacterized protein GSU0986 {Geobacter sulfurreducens [TaxId: 35554]}
Probab=5.31 E-value=1.2e+02 Score=19.66 Aligned_cols=10 Identities=40% Similarity=0.730 Sum_probs=7.1
Q ss_pred eEEEEeeccc
Q psy9368 146 TVITFYMGQS 155 (179)
Q Consensus 146 ~~~~~~~~~~ 155 (179)
-++.||+|.+
T Consensus 101 l~~~f~~~~~ 110 (111)
T d2ia7a1 101 LVYPFYLKES 110 (111)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEecCC
Confidence 3677888875
No 6
>d2fwua1 b.1.27.1 (A:501-657) Sodium/calcium exchanger 1 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=4.88 E-value=1.7e+02 Score=19.91 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=16.8
Q ss_pred eEEEEeeccceeeEEEeccC
Q psy9368 146 TVITFYMGQSTQTFSISTLS 165 (179)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~ 165 (179)
..++|-.|+..+++.|..+.
T Consensus 58 g~l~F~~ge~~k~i~i~i~~ 77 (157)
T d2fwua1 58 GELEFQNDEIVKTISVKVID 77 (157)
T ss_dssp EEEEECSSCCCCEEEEEECC
T ss_pred CcEEECCCceEEEEEeeecC
Confidence 36899999999999987654
No 7
>d2fug71 d.82.2.2 (7:3-129) NADH-quinone oxidoreductase subunit 15, Nqo15 {Thermus thermophilus [TaxId: 274]}
Probab=4.00 E-value=3.3e+02 Score=19.42 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=25.2
Q ss_pred ccCCceEEEEeeccc-eeeEEEeccCCchhhh
Q psy9368 141 AKLPRTVITFYMGQS-TQTFSISTLSPRPILL 171 (179)
Q Consensus 141 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 171 (179)
-.||-||.+.-..+. .|-|-+...|||-.-|
T Consensus 46 YdLPTTvMs~sls~~~G~p~l~a~vSPRHa~l 77 (127)
T d2fug71 46 YDLPTTIMTASLSDGLGEPFLLADVSPRHAKL 77 (127)
T ss_dssp CCCSCSEEEEEEECSSCCEEEEEEECCTTCBS
T ss_pred ccCChhheEEeeccCCCCEEEEEecCccceeh
Confidence 368999999888774 8899999999986544
No 8
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Probab=2.96 E-value=2.6e+02 Score=16.31 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=17.5
Q ss_pred EEEEeeccceeeEEEeccCCchhhhhhhhh
Q psy9368 147 VITFYMGQSTQTFSISTLSPRPILLSYLFA 176 (179)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (179)
+...|+|-..++..+.-..-+.+.+.+.+.
T Consensus 48 l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~ 77 (79)
T d1h8la1 48 VTASARGYDPVTKTVEVDSKGGVQVNFTLS 77 (79)
T ss_dssp EEEECTTBCCEEEEEEECSSCEEECCEEEC
T ss_pred EEEEEEEeccEEEEEEECCCCeEEEEEEEc
Confidence 455566777777776655555554444433
No 9
>d1wgra_ d.15.1.5 (A:) Growth factor receptor-bound protein 7, GRB-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.73 E-value=5.4e+02 Score=15.99 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=17.0
Q ss_pred ccCCceEEEEeeccceeeEEEecc
Q psy9368 141 AKLPRTVITFYMGQSTQTFSISTL 164 (179)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~ 164 (179)
.+-|+-|--|+|+.++.++.|+.-
T Consensus 6 ~~~~~vvkv~~~dg~~k~l~V~~~ 29 (100)
T d1wgra_ 6 SGRPHVVKVYSEDGACRSVEVAAG 29 (100)
T ss_dssp CCSCEEEEEEETTSCEEEEEECTT
T ss_pred CCCceEEEEEecCCCEEEEEECCC
Confidence 445666666777888888888643
No 10
>d1ffva2 d.15.4.2 (A:3-81) Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=2.48 E-value=6.6e+02 Score=15.60 Aligned_cols=28 Identities=25% Similarity=0.511 Sum_probs=19.0
Q ss_pred ceEEEEeeccceeeEEEeccCCchhhhhhhh
Q psy9368 145 RTVITFYMGQSTQTFSISTLSPRPILLSYLF 175 (179)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (179)
|.+|+|-......... ..++-.||.||-
T Consensus 1 k~~i~~~vNG~~~~~~---v~~~~~Ll~~LR 28 (79)
T d1ffva2 1 KKIITVNVNGKAQEKA---VEPRTLLIHFLR 28 (79)
T ss_dssp CEEEEEEETTEEEEEE---ECTTCBHHHHHH
T ss_pred CcEEEEEECCEEEEEe---CCCCCCHHHHHh
Confidence 4678887765554443 567888888874
Done!