RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9372
         (57 letters)



>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase
          domain {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 418

 Score = 22.0 bits (47), Expect = 6.7
 Identities = 8/30 (26%), Positives = 12/30 (40%)

Query: 1  MNPIDLQRVKVTPRTLDLISPDTQAWQNDY 30
          M P    R     RT D + P  + + + Y
Sbjct: 38 MLPSQHTRKPEDVRTKDQLFPLAKEFLDQY 67


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.130    0.395 

Gapped
Lambda     K      H
   0.267   0.0673    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 212,137
Number of extensions: 6457
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 57
Length of database: 2,407,596
Length adjustment: 27
Effective length of query: 30
Effective length of database: 2,036,886
Effective search space: 61106580
Effective search space used: 61106580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.0 bits)