BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9377
(106 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 118 bits (296), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
++VG+GAFGVV K W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC N
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 72
Query: 66 PVCLVMEYAEGGSLYNELQ 84
PVCLVMEYAEGGSLYN L
Sbjct: 73 PVCLVMEYAEGGSLYNVLH 91
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By
5z-7-oxozeaenol
Length = 315
Score = 118 bits (296), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
++VG+GAFGVV K W+ + VA+K IE+E+ERKAF VE+RQLSRV+HPNIVKLYGAC N
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-N 73
Query: 66 PVCLVMEYAEGGSLYNELQ 84
PVCLVMEYAEGGSLYN L
Sbjct: 74 PVCLVMEYAEGGSLYNVLH 92
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2 LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
+GG+K+ G+G FGVV+KG N VAVK I TE ++ F E++ +++ H N+
Sbjct: 34 VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 56 VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
V+L G + G+ +CLV Y GSL + L
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2 LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
+GG+K+ G+G FGVV+KG N VAVK I TE ++ F E++ +++ H N+
Sbjct: 34 VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92
Query: 56 VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
V+L G + G+ +CLV Y GSL + L
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 2 LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
+GG+K+ G+G FGVV+KG N VAVK I TE ++ F E++ +++ H N+
Sbjct: 28 VGGNKM-GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 86
Query: 56 VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
V+L G + G+ +CLV Y GSL + L
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 2 LGGSKIVGQGAFGVVWKGLWQNQYVAVK------HIETEAERKAFAVEVRQLSRVSHPNI 55
+GG+K G+G FGVV+KG N VAVK I TE ++ F E++ ++ H N+
Sbjct: 25 VGGNK-XGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENL 83
Query: 56 VKLYG-ACTGNPVCLVMEYAEGGSLYNEL 83
V+L G + G+ +CLV Y GSL + L
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VAVK I E F E + + ++SHP +VK YG C+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 64 GN-PVCLVMEYAEGGSLYNELQ 84
P+ +V EY G L N L+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLR 95
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E F E + ++SHP +V+LYG C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 95 APICLVFEFMEHGCLSDYLR 114
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E + F E + ++SHP +V+LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 75 APICLVFEFMEHGCLSDYLR 94
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E + F E + ++SHP +V+LYG C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 73 APICLVFEFMEHGCLSDYLR 92
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E + F E + ++SHP +V+LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 75 APICLVFEFMEHGCLSDYLR 94
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E + F E + ++SHP +V+LYG C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 78 APICLVFEFMEHGCLSDYLR 97
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 8 VGQGAFGVVWKGLWQNQ-YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG+V G W N+ VA+K I E + F E + ++SHP +V+LYG C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 66 -PVCLVMEYAEGGSLYNELQ 84
P+CLV E+ E G L + L+
Sbjct: 76 APICLVTEFMEHGCLSDYLR 95
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHI---ETEAER-KAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V + W VAVK + + AER F EV + R+ HPNIV GA T
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 64 GNP-VCLVMEYAEGGSLYNELQRSSA 88
P + +V EY GSLY L +S A
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGA 130
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHI---ETEAER-KAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V + W VAVK + + AER F EV + R+ HPNIV GA T
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 64 GNP-VCLVMEYAEGGSLYNELQRSSA 88
P + +V EY GSLY L +S A
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGA 130
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV------EVRQLSRVSHPNIVKLY 59
+I+G G FG V++ W VAVK + + E + + + HPNI+ L
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 60 GACTGNP-VCLVMEYAEGGSL 79
G C P +CLVME+A GG L
Sbjct: 73 GVCLKEPNLCLVMEFARGGPL 93
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 111
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 107
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 118
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FGVV G W+ QY VA+K I E F E + + +SH +V+LYG CT
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 64 GN-PVCLVMEYAEGGSLYNELQR-----SSAASLKFCK 95
P+ ++ EY G L N L+ + L+ CK
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 6 KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHPN 54
K +G+G FG+V KG + VA+K + ETE K F EV +S ++HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 55 IVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
IVKLYG NP +VME+ G LY+ L
Sbjct: 85 IVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 5 SKIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHP 53
K +G+G FG+V KG + VA+K + ETE K F EV +S ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 54 NIVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
NIVKLYG NP +VME+ G LY+ L
Sbjct: 84 NIVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
Query: 6 KIVGQGAFGVVWKG--LWQNQYVAVKHI-------ETEAERK--AFAVEVRQLSRVSHPN 54
K +G+G FG+V KG + VA+K + ETE K F EV +S ++HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 55 IVKLYGACTGNPVCLVMEYAEGGSLYNEL 83
IVKLYG NP +VME+ G LY+ L
Sbjct: 85 IVKLYG-LMHNPPRMVMEFVPCGDLYHRL 112
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 6 KIVGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FG VW G W N VA+K ++ ++F E + + ++ H +V+LY +
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ +LK +
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL 107
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 76 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 106
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 77 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 107
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 146
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 87 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 82 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 112
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 86 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 116
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 83 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 113
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 90 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 120
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 91 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 121
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 89 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 119
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6 KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
K +G+G FG V KG VAVK ++ A E + E L +V+HP++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56 VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
+KLYGAC+ + P+ L++EYA+ GSL L+ S
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G FG VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 87 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 97 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 133
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6 KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
K +G+G FG V KG VAVK ++ A E + E L +V+HP++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56 VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
+KLYGAC+ + P+ L++EYA+ GSL L+ S
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)
Query: 6 KIVGQGAFGVV-------WKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNI 55
K +G+G FG V KG VAVK ++ A E + E L +V+HP++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 56 VKLYGACTGN-PVCLVMEYAEGGSLYNELQRS 86
+KLYGAC+ + P+ L++EYA+ GSL L+ S
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 140
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGAC 62
+G+G FG V+ G + N VAVK + F E R L + SHPNIV+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 63 T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
T P+ +VME +GG L R+ A L+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLR 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ + L+ ++
Sbjct: 76 PIXIVTEYMSKGSLLDFLKGETGKYLRLPQL 106
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQ 102
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYGAC 62
+G+G FG V+ G + N VAVK + F E R L + SHPNIV+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 63 T-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
T P+ +VME +GG L R+ A L+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL-RTEGARLR 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 104 LIGVITENPVWIIMELCTLGELRSFLQ 130
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQ 102
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQ 102
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 81 LIGVITENPVWIIMELCTLGELRSFLQ 107
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQ 102
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKF 93
P+ +V EY GSL + L+ + L+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRL 279
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ + L+ ++
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With
A Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 73 LIGVITENPVWIIMELCTLGELRSFLQ 99
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ + L+ ++
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 79 LIGVITENPVWIIMELCTLGELRSFLQ 105
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 130
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V EY E GSL + L++ A
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA 113
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKF 93
P+ +V EY GSL + L+ + L+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRL 279
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 78 LIGVITENPVWIIMELCTLGELRSFLQ 104
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ + L+ ++
Sbjct: 79 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 109
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKF 93
P+ +V EY GSL + L+ + L+
Sbjct: 335 PIYIVTEYMSKGSLLDFLKGETGKYLRL 362
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V+EY GSL + L+ L+ ++
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V+EY GSL + L+ L+ ++
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQ 482
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
Query: 6 KIVGQGAFGVVWKGLW---QNQYVAV-----KHIETEAERKAFAVEVRQLSRVSHPNIVK 57
+ +G+G FG V +G++ +N +AV K+ +++ R+ F E + + HP+IVK
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQ 84
L G T NPV ++ME G L + LQ
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQ 482
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 32 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSA 88
+ +V ++ EG SLY+ L S
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASET 115
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +VMEY G L + L+ L+ ++
Sbjct: 86 PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKF 93
P+ +V EY GSL + L+ L+
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKYLRL 280
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKF 93
P+ +V EY GSL + L+ + L+
Sbjct: 252 PIYIVGEYMSKGSLLDFLKGETGKYLRL 279
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH 95
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 63 -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 74 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 110
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 63 -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 72 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 108
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 63 -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 77 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 113
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGAC---- 62
+G+G FG VW+G W+ + VAVK + ER F E+ Q + H NI+ A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 63 -TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
T + LV +Y E GSL++ L R + K+ L
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 77 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 107
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWK----GLWQNQ---YVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
+G+GAFG V++ GL + VAVK ++ EA + F E ++ +PNIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
L G C G P+CL+ EY G L NE RS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDL-NEFLRS 143
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQYV---AVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + V AVK +++ A E++A E++ +S + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
IV L GACT G PV ++ EY G L N L+R + A L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 20 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSA 88
+ +V ++ EG SLY+ L S
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASET 103
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 5 SKIVGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYG 60
S +G G+FG V+KG W VAVK ++ T + +AF EV L + H NI+ G
Sbjct: 41 STRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 61 ACTGNPVCLVMEYAEGGSLYNELQ 84
T + + +V ++ EG SLY L
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLH 123
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 32 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSA 88
+ +V ++ EG SLY+ L S
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHASET 115
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 75 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 105
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + VAVK +++ A E++A E++ +S + H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLK 92
IV L GACT G PV ++ EY G L N L+R + A L
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 18 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH 97
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 21 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH 100
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 21 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH 100
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 43 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLH 122
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 36 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLH 115
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 44 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 44 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLH 123
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G G+FG V+KG W VAVK + T + +AF EV L + H NI+ G T
Sbjct: 16 IGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 64 GNPVCLVMEYAEGGSLYNELQ 84
+ +V ++ EG SLY+ L
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH 95
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY GSL + L+ L+ ++
Sbjct: 86 PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL 116
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
K++G G FG V KG+W + V +K IE ++ R++F + + + H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
+L G C G+ + LV +Y GSL + +++ A
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA 129
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIVKLYGA----- 61
VG+G +G VW+G WQ + VAVK + E+ F E+ + H NI+ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+ + L+ Y E GSLY+ LQ ++ ++ +I L
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + VAVK +++ A E++A E++ +S + H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASL 91
IV L GACT G PV ++ EY G L N L+R + A L
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
VG+G +G VW+GLW + VAVK + E+ F E+ + H NI+ +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSS 87
+ + L+ Y E GSLY+ LQR +
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQRQT 101
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 5 SKIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
+++G G FG V G + + VA+K ++ TE +R+ F E + + HPN+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 57 KLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
L G T G PV +V+E+ E G+L L++
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHD 139
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
K++G G FG V KG+W + V +K IE ++ R++F + + + H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
+L G C G+ + LV +Y GSL + +++ A
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGA 111
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G G G VW G + + VAVK ++ AF E + ++ H +V+LY T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY E GSL + L+ S L K+
Sbjct: 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
VG+G +G VW+G WQ + VAVK + E+ F E+ + H NI+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+ + L+ Y E GSLY+ LQ ++ ++ +I L
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 112
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLYGA 61
VG+G +G VW+G WQ + VAVK + E+ F E+ + H NI+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 62 CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+ + L+ Y E GSLY+ LQ ++ ++ +I L
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 112
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKL 58
+G+GAFG V+ N VAVK ++ T A RK F E L+ + H +IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
YG C G+P+ +V EY + G L N+ R+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPD 114
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
+++G G FG V G + VA+K ++ TE +R+ F E + + HPNI+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
L G T PV +V EY E GSL L+++
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKND 118
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + VAVK +++ A E++A E++ +S + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSSAASLKF 93
IV L GACT G PV ++ EY G L N L+R L++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V E E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V E E GSL + L++ A
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 142
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFC 94
NI+ L GACT + P+ +++EYA G+L LQ L++C
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
+++G G FG V G + +VA+K ++ TE +R+ F E + + HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
L G T PV ++ E+ E GSL + L+++
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQND 129
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K+VG G FG V G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSSA 88
L G T PV +V E E GSL + L++ A
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA 113
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 VGQGAFGVVWKGLWQ-NQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+GQG FG VW G W VA+K ++ +AF E + + ++ H +V+LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 66 PVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ +V EY G L + L+ L+ ++
Sbjct: 86 PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL 116
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + VAVK +++ A E++A E++ +S + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
IV L GACT G PV ++ EY G L N L+R S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K +G GAFG V + GL + VAVK +++ A E++A E++ +S + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
IV L GACT G PV ++ EY G L N L+R S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
+++G G FG V G + +VA+K ++ TE +R+ F E + + HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQRSS 87
L G T PV ++ E+ E GSL + L+++
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQND 103
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
L K +G GAFG V + GL ++ VAVK ++ A ER+A E++ LS +
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 51 SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
+H NIV L GACT G P ++ EY G L N L+R
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAF-AVEVRQLSRVSHPNIV-----KLY 59
K +G+G +G VW G W+ + VAVK T E F E+ Q + H NI+ +
Sbjct: 43 KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 60 GACTGNPVCLVMEYAEGGSLYNELQRSS 87
G + + L+ +Y E GSLY+ L+ ++
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTT 130
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ ++ + VAVK ++ T +E KA E++ L+ + H N
Sbjct: 33 KSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLN 92
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++EY + G+L N L+
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5 SKIVGQGAFGVVWKGLWQNQY-----VAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
++I+G+G FG V++G++ N VAVK + + ++ F E + + HP+IV
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
KL G P ++ME G L + L+R+ + SL+ CK
Sbjct: 77 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 124
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5 SKIVGQGAFGVVWKGLWQNQY-----VAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
++I+G+G FG V++G++ N VAVK + T ++ F E + + HP+IV
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
KL G P ++ME G L + L+R+ + SL+ CK
Sbjct: 89 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 136
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
L K +G GAFG V + GL ++ VAVK ++ A ER+A E++ LS +
Sbjct: 41 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 100
Query: 51 SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
+H NIV L GACT G P ++ EY G L N L+R
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 136
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 5 SKIVGQGAFGVVWKGLWQNQY-----VAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
++I+G+G FG V++G++ N VAVK + + ++ F E + + HP+IV
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAA---------SLKFCK 95
KL G P ++ME G L + L+R+ + SL+ CK
Sbjct: 73 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 120
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K++G G FG V G + VA+K ++ T+ +R+ F E + + HPNI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
L G T PV ++ EY E GSL L+++
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKND 125
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K++G G FG V G + VA+K ++ T+ +R+ F E + + HPNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
L G T PV ++ EY E GSL L+++
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKND 104
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G FG V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE 100
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
+++G G FG V +G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 58 LYGACTGN-PVCLVMEYAEGGSLYNELQ 84
L G T + PV ++ E+ E G+L + L+
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLR 109
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 8 VGQGAFGVVWKGLWQNQ-------YVAVKHIETEAE--RKAFAVEVRQLSRVSHPNIVKL 58
+G+GAFG V+ N VAVK ++ ++ RK F E L+ + H +IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 59 YGACT-GNPVCLVMEYAEGGSLYNELQRSSAAS 90
YG C G+P+ +V EY + G L N+ R+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPD 112
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
L K +G GAFG V + GL ++ VAVK ++ A ER+A E++ LS +
Sbjct: 43 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 102
Query: 51 SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
+H NIV L GACT G P ++ EY G L N L+R
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 138
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
K++G G FG V G + VA+K ++ T+ +R+ F E + + HPNI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYNELQRSS 87
L G T PV ++ EY E GSL L+++
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKND 110
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
L K +G GAFG V + GL ++ VAVK ++ A ER+A E++ LS +
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 51 SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
+H NIV L GACT G P ++ EY G L N L+R
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETEAERKA----------FAVEVRQLSRVSHPNIVK 57
+GQG++GVV + +NQ A++ I+ + K EVR + ++ HPNI +
Sbjct: 34 IGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNEL 83
LY +CLVME GG L ++L
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKL 119
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
+++G G FG V +G + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 58 LYGACTGN-PVCLVMEYAEGGSLYNELQ 84
L G T + PV ++ E+ E G+L + L+
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLR 107
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 12/96 (12%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQNQ---YVAVKHIETEA---ERKAFAVEVRQLSRV- 50
L K +G GAFG V + GL ++ VAVK ++ A ER+A E++ LS +
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 51 SHPNIVKLYGACT-GNPVCLVMEYAEGGSLYNELQR 85
+H NIV L GACT G P ++ EY G L N L+R
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAER----KAFAVEVRQLSRVSHPNIVKLYGA 61
+++G+G FG V+ G W + VA++ I+ E + KAF EV + H N+V GA
Sbjct: 39 ELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 62 CTGNP-VCLVMEYAEGGSLYN 81
C P + ++ +G +LY+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYS 118
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQY---VAVKHIETEA---ERKAFAVEVRQLSRV-SHPN 54
K++G GAFG V G+ + VAVK ++ +A ER+A E++ ++++ SH N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
IV L GACT P+ L+ EY G L N L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 6 KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKFC 94
NI+ L GACT + P+ +++EYA G+L LQ L++C
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + + F EV + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRK 103
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + F EV + + H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRK 113
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+ +G+G FG V G ++ VAVK I+ +A +AF E ++++ H N+V+L G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 66 P--VCLVMEYAEGGSLYNELQ 84
+ +V EY GSL + L+
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLR 107
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + F EV + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRK 103
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETE--AERKA--FAVEVRQLSRVSHPNIVKLYGACT 63
+ + G +WKG WQ + VK ++ + RK+ F E +L SHPN++ + GAC
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 64 GNPV---CLVMEYAEGGSLYNELQRSS 87
P L+ + GSLYN L +
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGT 104
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + F EV + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRK 103
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + F EV + + H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRK 107
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + + F EV + + H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRK 113
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+ +G+G FG V G ++ VAVK I+ +A +AF E ++++ H N+V+L G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 66 P--VCLVMEYAEGGSLYNELQ 84
+ +V EY GSL + L+
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLR 98
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P +++E+ G+L + L+
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRE 100
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+ +G+G FG V G ++ VAVK I+ +A +AF E ++++ H N+V+L G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 66 P--VCLVMEYAEGGSLYNELQ 84
+ +V EY GSL + L+
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLR 92
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIETE--AERKA--FAVEVRQLSRVSHPNIVKLYGACT 63
+ + G +WKG WQ + VK ++ + RK+ F E +L SHPN++ + GAC
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 64 GNPV---CLVMEYAEGGSLYNELQ 84
P L+ + GSLYN L
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLH 101
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P +++E+ G+L + L+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE 102
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P +++E+ G+L + L+
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE 107
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P +++E+ G+L + L+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRE 103
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P +++E+ G+L + L+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE 102
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+ +G+G FG V G ++ VAVK I+ +A +AF E ++++ H N+V+L G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 66 P--VCLVMEYAEGGSLYNELQRSSAASL 91
+ +V EY GSL + L+ + L
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVL 286
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 6 KIVGQGAFGVVWKGLWQNQY------VAVKHIE---TEAERKAFAVEVRQLSRVSHPNIV 56
K++G G FG V+KG+ + VA+K ++ TE +R F E + + SH NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 57 KLYGACTG-NPVCLVMEYAEGGSL 79
+L G + P+ ++ EY E G+L
Sbjct: 110 RLEGVISKYKPMMIITEYMENGAL 133
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT- 63
+G G +G V+ G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 64 GNPVCLVMEYAEGGSLYNELQR 85
P +V EY G+L + L+
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRE 121
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 VGQGAFGVVWKGLW-------QNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
+G+ FG V+KG Q Q VA+K ++ +AE R+ F E +R+ HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 58 LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
L G T + P+ ++ Y G L+ L S S
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 127
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 8 VGQGAFGVVWKGLW-------QNQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVK 57
+G+ FG V+KG Q Q VA+K ++ +AE R+ F E +R+ HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 58 LYGACTGN-PVCLVMEYAEGGSLYNELQRSSAAS 90
L G T + P+ ++ Y G L+ L S S
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE 107
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE 100
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRE 103
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE 107
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE 107
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE 107
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE 102
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRE 115
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE 104
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE 102
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE 106
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE 104
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE 104
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE 102
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 65 N-PVCLVMEYAEGGSLYNELQR 85
P ++ E+ G+L + L+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE 102
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 65 N-PVCLVMEYAEGGSLYNELQ 84
P ++ E+ G+L + L+
Sbjct: 288 EPPFYIITEFMTYGNLLDYLR 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEY 135
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 135
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 128
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 8 VGQGAFGVVWKGLW-----QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
+G G+FGVV +G W + VAVK ++ + + F EV + + H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 58 LYGACTGNPVCLVMEYAEGGSLYNELQR 85
LYG P+ +V E A GSL + L++
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRK 107
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 127
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 124
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 65 N-PVCLVMEYAEGGSLYNELQ 84
P ++ E+ G+L + L+
Sbjct: 327 EPPFYIITEFMTYGNLLDYLR 347
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G G +G V++G+W+ + VAVK + E E + F E + + HPN+V+L G CT
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 65 N-PVCLVMEYAEGGSLYNELQ 84
P ++ E+ G+L + L+
Sbjct: 285 EPPFYIITEFMTYGNLLDYLR 305
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 8 VGQGAFGVVWKGLWQNQYVAVKHIE------TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G+F V+KGL V V E T++ER+ F E L + HPNIV+ Y +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 62 ----CTGNP-VCLVMEYAEGGSLYNELQRSSAASLK 92
G + LV E G+L L+R +K
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK 129
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KG+W + VA+K + KA F E ++ + HP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 57 KLYGACTGNPVCLVMEYAEGGSL 79
+L G C + LV + G L
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCL 126
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KG+W + VA+K + KA F E ++ + HP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSL 79
+L G C + LV + G L
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCL 103
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L+F
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEF 135
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGXLLD 106
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 81 RLLGICLTSTVQLIMQLMPFGCLLD 105
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLD 107
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGCLLD 106
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLD 109
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 84 RLLGICLTSTVQLIMQLMPFGCLLD 108
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLD 107
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLD 107
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLD 109
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FG VW G + N VAVK ++ +AF E + + H +V+LY T
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 64 -GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ EY GSL + L+ + K+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL 112
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 6 KIVGQGAFGVVWKGLWQNQY--VAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ + + VA+K IE E E+ + + HPNI++L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
Y + L++EYA G LY ELQ+S
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKS 117
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8 VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
+G G++G +VWK L Y ++ TEAE++ EV L + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
IV+ Y T + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8 VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
+G G++G +VWK L Y ++ TEAE++ EV L + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
IV+ Y T + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
Query: 8 VGQGAFG-------------VVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPN 54
+G G++G +VWK L Y ++ TEAE++ EV L + HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSM----TEAEKQMLVSEVNLLRELKHPN 66
Query: 55 IVKLYGAC---TGNPVCLVMEYAEGGSL 79
IV+ Y T + +VMEY EGG L
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHIETEAERKAFAVEVRQLS---RVSHPNIVKLYGAC 62
+G G + V+KGL + YVA+K ++ ++E + +R++S + H NIV+LY
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 63 -TGNPVCLVMEYAEGG 77
T N + LV E+ +
Sbjct: 73 HTENKLTLVFEFMDND 88
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
K +G G FGV + + N+ VAVK+IE E + E+ + HPNIV+
Sbjct: 25 KDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63 -TGNPVCLVMEYAEGGSLYNEL 83
T + +VMEYA GG L+ +
Sbjct: 85 LTPTHLAIVMEYASGGELFERI 106
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 2 LGGSKIVGQGAFGVVWKGLW-QNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLY 59
L K +G G FG VW + ++ VAVK ++ +AF E + + H +VKL+
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 60 GACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
T P+ ++ E+ GSL + L+ + K+
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 113
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY
KINASES BY Mimicking Host Substrates
Length = 319
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + + +K F EVR + ++HPNIVKL
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 71
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYL 97
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + + +K F EVR + ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + + +K F EVR + ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + + +K F EVR + ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLWQNQ--YVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ +N +A+K +E EV S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG + V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVV----WKGLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V GL +++ VAVK ++++A K + + ++ + H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L LQ L++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 176
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 6 KIVGQGAFGVVWKGLWQNQY-VAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FG VW G + N VAVK ++ +AF E + + H +V+LY T
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 64 G-NPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ E+ GSL + L+ + K+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL 111
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVKLYGA 61
K +G G FGV + + N+ VAVK+IE E+ A V E+ + HPNIV+
Sbjct: 25 KDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEV 83
Query: 62 C-TGNPVCLVMEYAEGGSLYNEL 83
T + +VMEYA GG L+ +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERI 106
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
KI+G G G V G + + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 58 LYGACT-GNPVCLVMEYAEGGSL 79
L G T G +V EY E GSL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL 137
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 115
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ + +Y A+K + E E E R L HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R + + + Y
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 6 KIVGQGAFGVVWKGLWQ-----NQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVK 57
KI+G G G V G + + VA+K ++ TE +R+ F E + + HPNI++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 58 LYGACT-GNPVCLVMEYAEGGSL 79
L G T G +V EY E GSL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSL 137
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ K +Y A+K ++ E E E R L HP + L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R S + Y
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ K +Y A+K ++ E E E R L HP + L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R S + Y
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ K +Y A+K ++ E E E R L HP + L
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R S + Y
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ K +Y A+K ++ E E E R L HP + L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R S + Y
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVKL 58
K++G+G FG ++ K +Y A+K ++ E E E R L HP + L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
Y T + +C VMEYA GG L+ L R S + Y
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 115
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 110
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G+G++G V+K + + Q VA+K + E++ + E+ + + P++VK YG+ N
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 66 -PVCLVMEYAEGGSLYN 81
+ +VMEY GS+ +
Sbjct: 97 TDLWIVMEYCGAGSVSD 113
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 105
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 113
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 109
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 106
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 111
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 112
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 104
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 107
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 124
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4 GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
G +++G+G+FG ++ K Q AVK ++ + ++++ EV+ L ++ HPNI+
Sbjct: 36 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
KLY LV E GG L++E+
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEI 123
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAV+ I+ + + +K F EVR + ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAV+ I+ + + +K F EVR + ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGL-WQNQYVAVKHI--ETEAERKAFAVEVRQ----LSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +T+ E+ ++R+ S + HPNI++L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGL-WQNQYVAVKHI--ETEAERKAFAVEVRQ----LSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +T+ E+ ++R+ S + HPNI++L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI 118
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
L K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 52 HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPF 100
H N+V L GACT G P+ +++E+ + G+L L+ + + +Y F
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FG VW + ++ VAVK ++ + +AF E + + H +VKL+ T
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ E+ GSL + L+ + K+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
L K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 52 HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPF 100
H N+V L GACT G P+ +++E+ + G+L L+ + + +Y F
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEA-ERKAFAVEVRQLSRVSHPNIVKLYGACT 63
K +G G FG VW + ++ VAVK ++ + +AF E + + H +VKL+ T
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 64 GNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
P+ ++ E+ GSL + L+ + K+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 6 KIVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRV-SHPNIVK 57
++G+G FG V K GL + + +K ++ + + FA E+ L ++ HPNI+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNELQRS 86
L GAC + L +EYA G+L + L++S
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKS 110
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent
Dual Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLD 99
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 7 IVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC 62
I+G+G FG V+KG L VAVK ++ E + F EV +S H N+++L G C
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 63 -TGNPVCLVMEYAEGGSLYNELQ 84
T LV Y GS+ + L+
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR 127
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 5 SKIVGQGAFGVVWK------GLWQNQYVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIV 56
++I+G G FG V K GL +A K I+T +++ E+ ++++ H N++
Sbjct: 94 TEILGGGRFGQVHKCEETATGL----KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 57 KLYGAC-TGNPVCLVMEYAEGGSLYNEL 83
+LY A + N + LVMEY +GG L++ +
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRI 177
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 7 IVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKA---FAVEVRQLSRVSHPNIVKLYGAC 62
I+G+G FG V+KG L VAVK ++ E + F EV +S H N+++L G C
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 63 -TGNPVCLVMEYAEGGSLYNELQ 84
T LV Y GS+ + L+
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR 119
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQ 84
G C + L+MEY GSL + LQ
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ 108
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8 VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
+G GAFG V+K QN+ +V K I+T++E + + VE+ L+ HPNIVKL A
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62 C-TGNPVCLVMEYAEGGSL 79
N + +++E+ GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8 VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
+G GAFG V+K QN+ +V K I+T++E + + VE+ L+ HPNIVKL A
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62 C-TGNPVCLVMEYAEGGSL 79
N + +++E+ GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 8 VGQGAFGVVWKGLWQNQYVAV----KHIETEAERKA--FAVEVRQLSRVSHPNIVKLYGA 61
+G GAFG V+K QN+ +V K I+T++E + + VE+ L+ HPNIVKL A
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 62 C-TGNPVCLVMEYAEGGSL 79
N + +++E+ GG++
Sbjct: 103 FYYENNLWILIEFCAGGAV 121
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 76
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGXLLD 105
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 72
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLD 130
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 71
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 72
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLD 105
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLD 105
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLD 102
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLD 108
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLD 108
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLD 107
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLD 108
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLD 115
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++ GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+M+ G L +
Sbjct: 88 RLLGICLTSTVQLIMQLMPFGCLLD 112
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6 KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
K++GQG+FG V+ G Q A+K ++ +R +E L V+HP IV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 57 KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
KL Y T + L++++ GG L+ L + + + K YL
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
K +G G FGV + + N+ VAVK+IE E + E+ + HPNIV+
Sbjct: 24 KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 63 -TGNPVCLVMEYAEGGSLYNEL 83
T + +VMEYA GG L+ +
Sbjct: 84 LTPTHLAIVMEYASGGELFERI 105
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
K +G G FGV + + N+ VAVK+IE E + E+ + HPNIV+
Sbjct: 25 KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63 -TGNPVCLVMEYAEGGSLYNEL 83
T + +VMEYA GG L+ +
Sbjct: 85 LTPTHLAIVMEYASGGELFERI 106
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIET-EAERKAFAVEVRQLSRVSHPNIVKLYGAC 62
K +G G FGV + + N+ VAVK+IE E + E+ + HPNIV+
Sbjct: 25 KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 63 -TGNPVCLVMEYAEGGSLYNEL 83
T + +VMEYA GG L+ +
Sbjct: 85 LTPTHLAIVMEYASGGELFERI 106
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q +++ + +A+ + VE QL R + HPNI++
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 69
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLD 107
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLD 111
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6 KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
K++GQG+FG V+ G Q A+K ++ +R +E L V+HP IV
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 57 KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
KL Y T + L++++ GG L+ L + + + K YL
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLD 112
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLD 112
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 73
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 73
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + +K F EVR + ++HPNIVKL
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LVMEYA GG +++ L
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYL 105
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G +Y ELQ+ S + Y+
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 75
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ QN+++ A+K +E E E+ S + HPNI+++
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
Y + L++E+A G LY ELQ+
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQK 107
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVEVRQLSR-------VSHPNIVK 57
+ +G+G FG V+ Q++++ + +A+ + VE QL R + HPNI++
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNILR 74
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
LYG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ QN+++ A+K +E E E+ S + HPNI+++
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
Y + L++E+A G LY ELQ+
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQK 107
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLD 105
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYVAVKHIETEAERKAFAVE------VRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ + +A+ + VE V S + HPNI++L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G +Y ELQ+ S + Y+
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ A+K +E EV S + HPNI++L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ QN+++ A+K +E E E+ S + HPNI+++
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
Y + L++E+A G LY ELQ+
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQK 108
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ A+K +E EV S + HPNI++L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 131
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ A+K +E EV S + HPNI++L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 59 YGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 6 KIVGQGAFGVVWKGLW-QNQYV-AVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+ +G+G FG V+ Q++++ A+K +E EV S + HPNI++L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 59 YGA-CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
YG V L++EYA G++Y ELQ+ S + Y+
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 140
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 18/104 (17%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS------LKFCKIYL 98
T N + LV E+ L+ +L++ AS L K YL
Sbjct: 78 IHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYL 116
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4 GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
G +++G+G+FG ++ K Q AVK ++ + ++++ EV+ L ++ HPNI+
Sbjct: 53 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
KLY LV E GG L++E+
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEI 140
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4 GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
G +++G+G+FG ++ K Q AVK ++ + ++++ EV+ L ++ HPNI+
Sbjct: 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
KLY LV E GG L++E+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEI 117
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4 GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
G +++G+G+FG ++ K Q AVK ++ + ++++ EV+ L ++ HPNI+
Sbjct: 54 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
KLY LV E GG L++E+
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEI 141
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 7 IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVSH-PNIVKL 58
++G+G FG V K GL + + +K ++ + + FA E+ L ++ H PNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
GAC + L +EYA G+L + L++S
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKS 120
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKKFMDAS 98
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKKFMDAS 98
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 73 IHTENKLYLVFEF-----LHQDLKKFMDAS 97
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 78 IHTENKLYLVFEF-----LHQDLKKFMDAS 102
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDAS 99
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 7 IVGQGAFGVVWK------GLWQNQYVA-VKHIETEAERKAFAVEVRQLSRVSH-PNIVKL 58
++G+G FG V K GL + + +K ++ + + FA E+ L ++ H PNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRS 86
GAC + L +EYA G+L + L++S
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKS 117
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+MEY GSL + LQ+
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK 137
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 72 IHTENKLYLVFEF-----LHQDLKKFMDAS 96
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDAS 99
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VA+K I+ + +K F EVR + ++HPNIVKL
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 79
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + L+MEYA GG +++ L
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYL 105
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIETE-----AERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VA+K I+ + +K F EVR + ++HPNIVKL
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKL 76
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + L+MEYA GG +++ L
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYL 102
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+G FG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 134
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+G FG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 131
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+G FG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 129
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 4 GSKIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIV 56
G +++G+G+FG ++ K Q AVK ++ + ++++ EV+ L ++ HPNI
Sbjct: 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 57 KLYGACTGNP-VCLVMEYAEGGSLYNEL 83
KLY LV E GG L++E+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEI 117
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 161
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 26 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 85
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 86 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 117
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 119
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVEVRQ-----LSRVSHPNIVKL 58
+ +G G+FG V + +Y A+K ++ E + VE LS V+HP I+++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+G + ++M+Y EGG L++ L++S K Y
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY 111
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 2 LGGSKIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVS 51
L K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 52 HP-NIVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
H N+V L GACT G P+ +++E+ + G+L L+
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 125
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 124
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 115
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 8 VGQGAFGVV----WKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N + VAVK ++ TE + F E+ L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQR 85
G C + L+ME+ GSL LQ+
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQK 109
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ +++E+ + G+L L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 126
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 6 KIVGQGAFGV--VWKGLWQNQYVAVKHIETEAE-RKAFAVEVRQLSRVSHPNIVKLYGAC 62
K +G G FGV + + + VAVK+IE A + E+ + HPNIV+
Sbjct: 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 63 -TGNPVCLVMEYAEGGSLYNEL 83
T + ++MEYA GG LY +
Sbjct: 86 LTPTHLAIIMEYASGGELYERI 107
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQY----VAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G G FG V +G+++ + VA+K ++ +A+ + E + + ++ +P IV+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 61 ACTGNPVCLVMEYAEGGSLYNEL 83
C + LVME A GG L+ L
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFL 426
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.0 bits (92), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 8 VGQGAFGVVW----KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGAC- 62
+G+GA +V+ KG Q Y A+K ++ ++K E+ L R+SHPNI+KL
Sbjct: 61 LGRGATSIVYRCKQKGT-QKPY-ALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 63 TGNPVCLVMEYAEGGSLYNEL-------QRSSAASLK 92
T + LV+E GG L++ + +R +A ++K
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L+ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKDFMDAS 95
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQY----VAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G G FG V +G+++ + VA+K ++ +A+ + E + + ++ +P IV+L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 61 ACTGNPVCLVMEYAEGGSLYNEL 83
C + LVME A GG L+ L
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFL 100
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAE 75
T N + LV E+ +
Sbjct: 74 IHTENKLYLVFEHVD 88
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 6 KIVGQ-GAFGVVWKGLWQNQYVAV----KHIET--EAERKAFAVEVRQLSRVSHPNIVKL 58
+I+G+ G FG V+K QN+ +V K I+T E E + + VE+ L+ HPNIVKL
Sbjct: 15 EIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 59 YGAC-TGNPVCLVMEYAEGGSL 79
A N + +++E+ GG++
Sbjct: 73 LDAFYYENNLWILIEFCAGGAV 94
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L+ AS
Sbjct: 74 IHTENKLYLVFEF-----LHQDLKTFMDAS 98
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 8 VGQGAFG--VVWKGLWQNQYVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G+FG ++ K + +K I + ER+ EV L+ + HPNIV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 62 CTGN-PVCLVMEYAEGGSLYNEL 83
N + +VM+Y EGG L+ +
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRI 114
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
+G G FG V G Q VAVK + + R V E++ L HP+I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 61 AC-TGNPVCLVMEYAEGGSLYN 81
T +VMEY GG L++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD 100
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 62 C-TGNPVCLVMEY 73
T N + LV E+
Sbjct: 73 IHTENKLYLVFEF 85
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ ++ E+ + G+L L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
+G G FG V G Q VAVK + + R V E++ L HP+I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 61 AC-TGNPVCLVMEYAEGGSLYN 81
T +VMEY GG L++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFD 100
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 62 C-TGNPVCLVMEY 73
T N + LV E+
Sbjct: 72 IHTENKLYLVFEF 84
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ ++ E+ + G+L L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 6 KIVGQGAFGVVWK----GLWQN---QYVAVKHIE---TEAERKAFAVEVRQLSRVSHP-N 54
K +G+GAFG V + G+ + + VAVK ++ T +E +A E++ L + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 55 IVKLYGACT--GNPVCLVMEYAEGGSLYNELQ 84
+V L GACT G P+ ++ E+ + G+L L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLR 115
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEY 73
T N + LV E+
Sbjct: 74 IHTENKLYLVFEF 86
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQ---LSRVSHPNIVKLY 59
S I+GQGA V++G + A+K + + V++R+ L +++H NIVKL+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 60 G---ACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
T L+ME+ GSLY L+ S A
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA 106
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVEVRQ---LSRVSHPNIVKLY 59
S I+GQGA V++G + A+K + + V++R+ L +++H NIVKL+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 60 G---ACTGNPVCLVMEYAEGGSLYNELQRSSAA 89
T L+ME+ GSLY L+ S A
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA 106
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 62 C-TGNPVCLVMEY 73
T N + LV E+
Sbjct: 74 IHTENKLYLVFEF 86
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 113 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 145
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G GAFG V+K + A K IET E E + + VE+ L+ HP IVKL GA
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 64 GN-PVCLVMEYAEGGSL 79
+ + +++E+ GG++
Sbjct: 87 HDGKLWIMIEFCPGGAV 103
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8 VGQGAFGVVWKGLWQNQ--YVAVKHIET--EAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
+G GAFG V+K + A K IET E E + + VE+ L+ HP IVKL GA
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 64 GN-PVCLVMEYAEGGSL 79
+ + +++E+ GG++
Sbjct: 79 HDGKLWIMIEFCPGGAV 95
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 6 KIVGQGAFGVV--WKGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G+G F V + + + VAVK I+ + + +K F EVR ++HPNIVKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNEL 83
+ T + LV EYA GG +++ L
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYL 104
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4 GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
G + +G+G +GVV+K QN Y A+K I E E + + +R++S + H NIV
Sbjct: 6 GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
KLY T + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4 GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
G + +G+G +GVV+K QN Y A+K I E E + + +R++S + H NIV
Sbjct: 6 GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
KLY T + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVK---------HIETEAERKAFAVEVRQLSRVSHPNIV 56
K++G GAFG V+KGLW + VK + K E ++ V +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLD 139
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 87 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 119
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 4 GSKIVGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAF-AVEVRQLS---RVSHPNIV 56
G + +G+G +GVV+K QN Y A+K I E E + + +R++S + H NIV
Sbjct: 6 GLEKIGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 57 KLYGAC-TGNPVCLVMEYAE 75
KLY T + LV E+ +
Sbjct: 64 KLYDVIHTKKRLVLVFEHLD 83
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 93 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 125
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++ GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLD 105
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 93 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 125
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 95 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 96 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 128
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQ 84
NI+ L GACT + P+ +++EYA G+L L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 92 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 124
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 96 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 128
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 95 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 6 KIVGQGAFGVVWKG--LWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVS-HPNIVKLYGA 61
++VG G +G V+KG + Q A+K ++ T E + E+ L + S H NI YGA
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 62 -CTGNP------VCLVMEYAEGGSLYNELQRSSAASLK 92
NP + LVME+ GS+ + ++ + +LK
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVK----- 57
+G G FG V + + Q+ + VA+K E R+ + +E++ + +++HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 58 --LYGACTGNPVCLVMEYAEGGSLYNELQR 85
L + L MEY EGG L L +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 112
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVK----- 57
+G G FG V + + Q+ + VA+K E R+ + +E++ + +++HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 58 --LYGACTGNPVCLVMEYAEGGSLYNELQR 85
L + L MEY EGG L L +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 111
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 111
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 95 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 76 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 111
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQ------YVAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++ GAFG V+KGLW + VA+K + KA E ++ V +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYN 81
+L G C + V L+ + G L +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLD 112
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 70 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 105
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 94 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 126
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 95 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 127
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 127
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 92 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 127
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 72 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 107
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 90 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 122
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 90 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 125
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 6 KIVGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
+ +G+G FG V +G + VAVK ++ E+ A E+ L + H NIV
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 57 KLYGACT---GNPVCLVMEYAEGGSLYNELQRS 86
K G CT GN + L+ME+ GSL L ++
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 94 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 126
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
++ G C LVME AE G L LQ++
Sbjct: 434 RMIGICEAESWMLVMEMAELGPLNKYLQQN 463
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLK 92
++ G C LVME AE G L LQ++ K
Sbjct: 82 RMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDK 117
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+K I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEY 73
T N + LV E+
Sbjct: 70 IHTENKLYLVFEH 82
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 6 KIVGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIV 56
+ +G+G FG V +G + VAVK ++ E+ A E+ L + H NIV
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 57 KLYGACT---GNPVCLVMEYAEGGSLYNELQRS 86
K G CT GN + L+ME+ GSL L ++
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 107
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 5 SKIVGQGAFGVVWKGLWQ--------NQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K +G G FG V KG +Q + A + E + ++ +P IV
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
++ G C LVME AE G L LQ++
Sbjct: 435 RMIGICEAESWMLVMEMAELGPLNKYLQQN 464
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+ I ETE E+ L ++HPNIVKL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDAS 95
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHI----ETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G +GVV+K + VA+ I ETE E+ L ++HPNIVKL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
T N + LV E+ L+ +L++ AS
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDAS 94
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.9 bits (89), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6 KIVGQGAFGVVW-----KGLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIV 56
K++GQG+FG V+ G Q A+K ++ +R +E L V+HP IV
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 57 KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
KL Y T + L++++ GG L+ L + + + K YL
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.5 bits (88), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 6 KIVGQGAFGVVWKG--LWQNQYVAVKHIE----TEAERKAFAV-EVRQLSRVSHPNIVKL 58
K +G+G F V++ L VA+K ++ +A+ +A + E+ L +++HPN++K
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 59 YGA-CTGNPVCLVMEYAEGGSL 79
Y + N + +V+E A+ G L
Sbjct: 98 YASFIEDNELNIVLELADAGDL 119
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.5 bits (88), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV-----EVRQLSRVSHPNIVKLYG 60
+G G FG V G + VAVK + + R V E++ L HP+I+KLY
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 61 A-CTGNPVCLVMEYAEGGSLYN 81
T + + +VMEY GG L++
Sbjct: 84 VISTPSDIFMVMEYVSGGELFD 105
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 7 IVGQGAFGVVWKGLWQN-QYVAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKLYGAC- 62
++G G FG V+KG+ ++ VA+K E+ + + F E+ LS HP++V L G C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 63 TGNPVCLVMEYAEGGSLYNELQRSSAASL 91
N + L+ +Y E G+L L S ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTM 134
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 7 IVGQGAFGVVWKGLWQN-QYVAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKLYGAC- 62
++G G FG V+KG+ ++ VA+K E+ + + F E+ LS HP++V L G C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 63 TGNPVCLVMEYAEGGSLYNELQRSSAASL 91
N + L+ +Y E G+L L S ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTM 134
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERK-AFAVEVRQLSRVSHPNIVKLYGA--- 61
++ +G FG VWK N+YVAVK + ++ EV L + H NI++ GA
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 62 --CTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
+ L+ + E GSL + L+ + + + C I
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHI 126
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 8 VGQGAFGVVWKGL-WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGAC 62
VG+G +GVV+K Q + VA+K I +AE + E+ L + HPNIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 63 TGNP-VCLVMEYAE 75
+ LV E+ E
Sbjct: 89 HSERCLTLVFEFME 102
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 6 KIVGQGAFGVVWKGLW----QNQY--VAVKHIETEAERKA---FAVEVRQLSRVSHPNIV 56
K++G GAFG V+KG+W +N VA+K + KA E ++ V P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 57 KLYGACTGNPVCLVMEYAEGGSLYNELQRS 86
+L G C + V LV + G L + ++ +
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVREN 112
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 8 VGQGAFGVVWKGL-WQNQYVAVKHIETEAERKAFAV----EVRQLSRVSHPNIVKLYGAC 62
VG+G +GVV+K Q + VA+K I +AE + E+ L + HPNIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 63 TGNP-VCLVMEYAE 75
+ LV E+ E
Sbjct: 89 HSERCLTLVFEFME 102
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A + + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKH-IETEAE---RKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G++GVV+K ++ Q VA+K +E+E + +K E+R L ++ HPN+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 62 C-TGNPVCLVMEYAEGGSLYNELQR 85
+ LV EY + L+ EL R
Sbjct: 71 FRRKRRLHLVFEYCDHTVLH-ELDR 94
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 7 IVGQGAFGVVWK--GLWQNQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
++GQGAFG V K ++Y A+K I TE + EV L+ ++H +V+ Y A
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 64 G-----NPVCLV---------MEYAEGGSLYN 81
P+ V MEY E G+LY+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD 104
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 6 KIVGQGAFGVVWKGLWQNQ-----YVAVKHIE----TEAERKAFAVEVRQLSRVSHPNIV 56
KI+G+G FG V +G + + VAVK ++ ++ E + F E + SHPN++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 57 KLYGAC 62
+L G C
Sbjct: 100 RLLGVC 105
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+G FG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++EYA G+L L+ +++
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 188
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++ YA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEY 142
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 114 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 146
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 100 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 132
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 5 SKIVGQGAFGVVWKG-LWQNQ----YVAVK---HIETEAERKAFAVEVRQLSRVSHPNIV 56
++++G+G FG V+ G L N + AVK I E F E + SHPN++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 57 KLYGAC---TGNPVCLVMEYAEGGSLYNELQRSS 87
L G C G+P+ +V+ Y + G L N ++ +
Sbjct: 154 SLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET 186
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 26/99 (26%)
Query: 6 KIVGQGAFGVVWK-----GLWQNQYVAVKHIE-------------TEAERKAFAVEVRQL 47
+++G+G +G V++ G + A+K ++ T+AER L
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-------L 75
Query: 48 SRVSHPNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQR 85
V HP IV L Y TG + L++EY GG L+ +L+R
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER 114
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 26/99 (26%)
Query: 6 KIVGQGAFGVVWK-----GLWQNQYVAVKHIE-------------TEAERKAFAVEVRQL 47
+++G+G +G V++ G + A+K ++ T+AER L
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-------L 75
Query: 48 SRVSHPNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQR 85
V HP IV L Y TG + L++EY GG L+ +L+R
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER 114
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 6 KIVGQGAFGVVWK----GLWQNQ-----YVAVKHIETEAERKAFAVEVRQLSRVS----H 52
K +G+GAFG V G+ +++ VAVK ++ +A K + V ++ + H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 53 PNIVKLYGACTGN-PVCLVMEYAEGGSLYNELQRSSAASLKF 93
NI+ L GACT + P+ +++ YA G+L L+ +++
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEY 142
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
+GQGA G V+ + Q VA++ + + + K + E+ + +PNIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VMEY GGSL +
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
+GQGA G V+ + Q VA++ + + + K + E+ + +PNIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VMEY GGSL +
Sbjct: 89 VGDELWVVMEYLAGGSLTD 107
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
+GQGA G V+ + Q VA++ + + + K + E+ + +PNIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VMEY GGSL +
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
+GQGA G V+ + Q VA++ + + + K + E+ + +PNIV L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VMEY GGSL +
Sbjct: 88 VGDELWVVMEYLAGGSLTD 106
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV--EVRQLSRVSHPNIVK-LYGAC 62
+GQGA G V+ + Q VA++ + + + K + E+ + +PNIV L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VMEY GGSL +
Sbjct: 89 VGDELWVVMEYLAGGSLTD 107
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With
The Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 8 VGQGAFGVVWKGL-WQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVK 57
+G+GA+G V+K +N ++VA+K + + + + +R L HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 58 LYGACT 63
L+ CT
Sbjct: 79 LFDVCT 84
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 36.2 bits (82), Expect = 0.004, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 6 KIVGQGAFGVVWKGLWQNQYV--AVKHIETEA------ERKAFAVEVRQLSRVSHPNIVK 57
K++G+G+FG V + + V AVK ++ +A E+ + L V HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 58 L-YGACTGNPVCLVMEYAEGGSLYNELQR 85
L + T + + V++Y GG L+ LQR
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQR 132
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 7 IVGQGAFGVVWK---GLWQNQYVAVKHI-ETEAERKAFAV---EVRQLSRVSHPNIVKLY 59
++G+G+FG V K + Q +Y AVK I + A+ K + EV L ++ HPNI+KL+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 60 GAC-TGNPVCLVMEYAEGGSLYNEL 83
+ +V E GG L++E+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI 112
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 8 VGQGAFGVVWKGL-WQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVK 57
+G+GA+G V+K +N ++VA+K + + + + +R L HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 58 LYGACT 63
L+ CT
Sbjct: 79 LFDVCT 84
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 7 IVGQGAFGVVWK---GLWQNQYVAVKHI-ETEAERKAFAV---EVRQLSRVSHPNIVKLY 59
++G+G+FG V K + Q +Y AVK I + A+ K + EV L ++ HPNI+KL+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 60 GAC-TGNPVCLVMEYAEGGSLYNEL 83
+ +V E GG L++E+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI 112
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G GA+G V K A+K I+ T + A EV L ++ HPNI+KL
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNEL 83
Y LVME GG L++E+
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEI 112
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 3 GGSKIVGQGAFGVVWKG--LWQNQYVAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKL 58
G ++G+G +G+V+ G L +A+K I R + E+ + H NIV+
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFW 101
G+ + N + + ME GGSL + L RS LK + + F+
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFY 127
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 6 KIVGQGAFGVVW---------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIV 56
K++GQG+FG V+ G V K +R +E L+ V+HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 57 KL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
KL Y T + L++++ GG L+ L + + + K YL
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 6 KIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
+ +G+G+FG V Q VA+K I + +K+ E+ L + HP+I+KL
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 59 YGACTG-NPVCLVMEYAEGGSLYN 81
Y T + +V+EYA GG L++
Sbjct: 75 YDVITTPTDIVMVIEYA-GGELFD 97
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 3 GGSKIVGQGAFGVVWKG--LWQNQYVAVKHIETEAER--KAFAVEVRQLSRVSHPNIVKL 58
G ++G+G +G+V+ G L +A+K I R + E+ + H NIV+
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIYLPFW 101
G+ + N + + ME GGSL + L RS LK + + F+
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFY 113
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYG 60
++G GAF ++ + + VA+K I EA + + E+ L ++ HPNIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 61 AC-TGNPVCLVMEYAEGGSLYNEL 83
+G + L+M+ GG L++ +
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI 107
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ Q VA+K I+ E E+ LS+ + K YG+
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
G+ + ++MEY GGS + L+
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLR 113
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ + VA+K I+ E E+ LS+ P + K YG+
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
+ ++MEY GGS + L+
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLE 117
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYG 60
++G GAF ++ + + VA+K I EA + + E+ L ++ HPNIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 61 AC-TGNPVCLVMEYAEGGSLYNEL 83
+G + L+M+ GG L++ +
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRI 107
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 8 VGQGAFGVVWKGL-WQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVK 57
+G+GA+G V+K +N ++VA+K + + + + +R L HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 58 LYGACT 63
L+ CT
Sbjct: 79 LFDVCT 84
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VME+ EGG+L +
Sbjct: 88 VGDELWVVMEFLEGGALTD 106
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 52 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 142
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VME+ EGG+L +
Sbjct: 92 VGDELWVVMEFLEGGALTD 110
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 114
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ + VA+K I+ E E+ LS+ P + K YG+
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
+ ++MEY GGS + L+
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE 97
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 40 FAVEVRQLSRVSHPNIVKLYGACTGN-PVCLVMEYAEGGSLYNEL 83
F E+ + + HPNI++LY N + LVME GG L+ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 114
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VME+ EGG+L +
Sbjct: 97 VGDELWVVMEFLEGGALTD 115
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 114
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 20 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 110
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VME+ EGG+L +
Sbjct: 99 VGDELWVVMEFLEGGALTD 117
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 107
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 113
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 15 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 74
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 105
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 21 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 111
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ + VA+K I+ E E+ LS+ P + K YG+
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
+ ++MEY GGS + L+
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE 97
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 63 TGNPVCLVMEYAEGGSL 79
G+ + +VME+ EGG+L
Sbjct: 142 VGDELWVVMEFLEGGAL 158
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V++Y +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 63 TGNPVCLVMEYAEGGSL 79
G+ + +VME+ EGG+L
Sbjct: 219 VGDELWVVMEFLEGGAL 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 23 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 113
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 40 FAVEVRQLSRVSHPNIVKLYGACTGN-PVCLVMEYAEGGSLYNEL 83
F E+ + + HPNI++LY N + LVME GG L+ +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE--TEAERKAFAVEVRQLSRVSHPNIVKLYGA-C 62
+G+G+ G+V ++ + VAVK ++ + R+ EV + H N+V +Y +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 63 TGNPVCLVMEYAEGGSLYN 81
G+ + +VME+ EGG+L +
Sbjct: 113 VGDELWVVMEFLEGGALTD 131
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGLWQ--NQYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ + VA+K I+ E E+ LS+ P + K YG+
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
+ ++MEY GGS + L+
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLE 112
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQ-------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPN 54
S+ +GQG+FG+V++G+ + VA+K + A ER F E + + +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 55 IVKLYGACT-GNPVCLVMEYAEGGSLYNELQ 84
+V+L G + G P ++ME G L + L+
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 107
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 7 IVGQGAFGVVWK--GLWQNQYVAVKHI-ETEAERKAFAVEVRQLSRVSHPNIVKLYGACT 63
++GQGAFG V K ++Y A+K I TE + EV L+ ++H +V+ Y A
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 64 G-----NPVCLV---------MEYAEGGSLYN 81
P+ V MEY E +LY+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD 104
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
+ N + +VMEYA GG +++ L+R
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.0 bits (79), Expect = 0.012, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 7 IVGQGAFG--VVWKGLWQNQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVKLYGA 61
++G GAF ++ + + VA+K I EA + + E+ L ++ HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 62 C-TGNPVCLVMEYAEGGSLYNEL 83
+G + L+M+ GG L++ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI 107
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.012, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 7 IVGQGAFGVVWK---GLWQNQYVAVKHI-ETEAERKAFAV---EVRQLSRVSHPNIVKLY 59
++G+G+FG V K + Q +Y AVK I + A+ K + EV L ++ HPNI+KL+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 60 GACT-GNPVCLVMEYAEGGSLYNEL 83
+ +V E GG L++E+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI 112
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 6 KIVGQGAFGVVWKG-LWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
K++G G+FGVV++ L ++ VA+K + + K +++ ++ V HPN+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRI--VKHPNVVDL 97
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
K +G+G+FG V Q VA+K I + K+ E+ L + HP+I+KL
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
Y + + + +V+EYA G L++ + + S
Sbjct: 70 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMS 101
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 12/63 (19%)
Query: 8 VGQGAFGVVWKGL--WQNQYVAVKHIETEA----------ERKAFAVEVRQLSRVSHPNI 55
+G GAFG VW + +N+ V VK I+ E + +E+ LSRV H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 56 VKL 58
+K+
Sbjct: 92 IKV 94
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
K +G+G+FG V Q VA+K I + K+ E+ L + HP+I+KL
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
Y + + + +V+EYA G L++ + + S
Sbjct: 80 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMS 111
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
K +G+G+FG V Q VA+K I + K+ E+ L + HP+I+KL
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
Y + + + +V+EYA G L++ + + S
Sbjct: 79 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMS 110
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEYA GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV---EVRQLSRVSHPNIVKLYGA- 61
+G+G+FG V+KG+ + + VA+K I+ E E+ LS+ P I + +G+
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 62 CTGNPVCLVMEYAEGGSLYNELQ 84
+ ++MEY GGS + L+
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLK 109
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIE-----TEAERKAFAVEVRQLSRVSHPNIVKL 58
K +G GA+G V K A+K I+ T + A EV L ++ HPNI+KL
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNEL 83
Y LVME GG L++E+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEI 95
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 6 KIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKA-----FAVEVRQLSRVSHPNIVKL 58
K +G+G+FG V Q VA+K I + K+ E+ L + HP+I+KL
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 59 YGAC-TGNPVCLVMEYAEGGSLYNELQRSSAAS 90
Y + + + +V+EYA G L++ + + S
Sbjct: 74 YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMS 105
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 8 VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G+G+FGV+++G L NQ VA+K R++ A ++R R KL CTG
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKF----EPRRSDAPQLRDEYRT-----YKLLAGCTGI 68
Query: 66 P 66
P
Sbjct: 69 P 69
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 8 VGQGAFGVVW--KGLWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G G V+ + N VA+K I E E K F EV S++SH NIV +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 61 ACTGNPVC--LVMEYAEGGSL 79
+ C LVMEY EG +L
Sbjct: 79 VDEEDD-CYYLVMEYIEGPTL 98
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV--------------EVRQLS 48
SK +G GA G V + + VA+K I ++ FA+ E+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIIS----KRKFAIGSAREADPALNVETEIEILK 70
Query: 49 RVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+++HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV--------------EVRQLS 48
SK +G GA G V + + VA+K I ++ FA+ E+ L
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIIS----KRKFAIGSAREADPALNVETEIEILK 69
Query: 49 RVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+++HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 70 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV--------------EVRQLS 48
SK +G GA G V + + VA+K I ++ FA+ E+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIIS----KRKFAIGSAREADPALNVETEIEILK 70
Query: 49 RVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+++HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 8 VGQGAFGVVWKG--LWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G+G+FGV+++G L NQ VA+K R++ A ++R R KL CTG
Sbjct: 17 IGEGSFGVIFEGTNLLNNQQVAIKF----EPRRSDAPQLRDEYRT-----YKLLAGCTGI 67
Query: 66 P 66
P
Sbjct: 68 P 68
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV--------------EVRQLS 48
SK +G GA G V + + VA+K I ++ FA+ E+ L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIIS----KRKFAIGSAREADPALNVETEIEILK 70
Query: 49 RVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+++HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 71 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
Query: 5 SKIVGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAV--------------EVRQLS 48
SK +G GA G V + + VA+K I ++ FA+ E+ L
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIIS----KRKFAIGSAREADPALNVETEIEILK 76
Query: 49 RVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+++HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 77 KLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 8 VGQGAFGVV--WKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
VG+G+FG V K AVK + E R E+ + +S P IV LYGA
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---VEELVACAGLSSPRIVPLYGAVREG 122
Query: 66 P-VCLVMEYAEGGSL 79
P V + ME EGGSL
Sbjct: 123 PWVNIFMELLEGGSL 137
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 8 VGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G+G+FG V + + Q AVK + E R A E+ + ++ P IV LYGA
Sbjct: 101 LGRGSFGEVHR-MEDKQTGFQCAVKKVRLEVFR---AEELMACAGLTSPRIVPLYGAVRE 156
Query: 65 NP-VCLVMEYAEGGSL 79
P V + ME EGGSL
Sbjct: 157 GPWVNIFMELLEGGSL 172
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 8 VGQGAFGVV--WKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
VG+G+FG V K AVK + E R E+ + +S P IV LYGA
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---VEELVACAGLSSPRIVPLYGAVREG 138
Query: 66 P-VCLVMEYAEGGSL 79
P V + ME EGGSL
Sbjct: 139 PWVNIFMELLEGGSL 153
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 8 VGQGAFGVVWKGLWQNQY---VAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTG 64
+G+G+FG V + + Q AVK + E R A E+ + ++ P IV LYGA
Sbjct: 82 LGRGSFGEVHR-MEDKQTGFQCAVKKVRLEVFR---AEELMACAGLTSPRIVPLYGAVRE 137
Query: 65 NP-VCLVMEYAEGGSL 79
P V + ME EGGSL
Sbjct: 138 GPWVNIFMELLEGGSL 153
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.3 bits (77), Expect = 0.018, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 6 KIVGQGAFGVVWKGLWQ------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
+ +G+G FG V + + VAVK ++ +A R + E+ L + H +I+
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 57 KLYGACT---GNPVCLVMEYAEGGSLYNELQRSS 87
K G C + LVMEY GSL + L R S
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.019, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVE--VRQLSRVSHPNIVKL----- 58
+++G+G +G V+KG + VAVK + + A R+ F E + ++ + H NI +
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVK-VFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 59 -YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
A LVMEY GSL L ++ + C++
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL 116
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFD 103
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 78 LHEVYENKTDVILILELVAGGELFD 102
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L++E GG L++
Sbjct: 78 LHEVYENKTDVILILELVAGGELFD 102
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY 146
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLR 111
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIET-------------EAERKAFAVEVRQLSRVSH 52
+++G+G FG Q + V H ET E ++ F EV+ + + H
Sbjct: 16 EVLGKGCFG---------QAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSL 79
PN++K G + + + EY +GG+L
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTL 94
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.9 bits (76), Expect = 0.023, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY 146
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 6 KIVGQGAFGVVWKGLW--QNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG 60
+++G GA VV + + VA+K I E E++ +S+ HPNIV Y
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 61 A-CTGNPVCLVMEYAEGGSLYN 81
+ + + LVM+ GGS+ +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLD 97
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 6 KIVGQGAFGVVWKGLW--QNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG 60
+++G GA VV + + VA+K I E E++ +S+ HPNIV Y
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 61 A-CTGNPVCLVMEYAEGGSLYN 81
+ + + LVM+ GGS+ +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLD 102
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLR 109
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.9 bits (76), Expect = 0.024, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 132
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL Y + + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKA-----FAVEVRQLSRVSHPNIVK 57
+G G F +V K ++ +Y A +K ++ A R+ EV L +V HPNI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNELQRSSAAS 90
L+ V L++E GG L++ L + + S
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL Y + + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 8 VGQGAFGVVW--KGLWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G G+FG V+ + + ++ VA+K + ++ + + EVR L ++ HPN ++ Y
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ-YR 120
Query: 61 AC--TGNPVCLVMEYAEGGS 78
C + LVMEY G +
Sbjct: 121 GCYLREHTAWLVMEYCLGSA 140
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 8 VGQGAFGVVWKGLWQN-------QYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIVK 57
+GQG+FG+V++G ++ VAVK + A ER F E + + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 58 LYGACT-GNPVCLVMEYAEGGSLYNELQ 84
L G + G P +VME G L + L+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLR 113
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.5 bits (75), Expect = 0.027, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P + KL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 33.5 bits (75), Expect = 0.027, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.027, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKL-YGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL Y + + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.027, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P + KL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEYA GG +++ L+R S + Y
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVK 57
K++G+G+FG V+ ++ NQ+ A+K ++ + + + VE R LS HP +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
++ T + VMEY GG L +Q L Y
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY 123
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEA-----ERKAFAVEVRQLSRV-SHPNIVK 57
K++G+G+FG V+ ++ NQ+ A+K ++ + + + VE R LS HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 58 LYGAC-TGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
++ T + VMEY GG L +Q L Y
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY 124
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV--------------EVRQLSRV 50
SK +G GA G V K ++ + I ++RK FA+ E+ L ++
Sbjct: 154 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVETEIEILKKL 211
Query: 51 SHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 212 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 5 SKIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAV--------------EVRQLSRV 50
SK +G GA G V K ++ + I ++RK FA+ E+ L ++
Sbjct: 140 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVETEIEILKKL 197
Query: 51 SHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKIYL 98
+HP I+K+ +V+E EGG L++++ + CK+Y
Sbjct: 198 NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ N + +VMEY GG +++ L+R S + Y
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNEL 83
L+ V L++E GG L++ L
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNEL 83
L+ V L++E GG L++ L
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL 105
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.5 bits (75), Expect = 0.031, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTGNP-VCLVMEYAEGGSLYNEL 83
L+ V L++E GG L++ L
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL 105
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 37 RKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLYN 81
R+ EV L + HPNI+ L+ V L++E GG L++
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 104
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.033, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P + KL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
+ N + +VMEYA GG +++ L+R
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRR 135
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.5 bits (75), Expect = 0.034, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 14/82 (17%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHI------ETEAERKAFAVEVRQLSRVS-HPNIV 56
K +G+GA+G+VWK + + + VAVK I T+A+R E+ L+ +S H NIV
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT--FREIMILTELSGHENIV 72
Query: 57 KLYGACTGN---PVCLVMEYAE 75
L + V LV +Y E
Sbjct: 73 NLLNVLRADNDRDVYLVFDYME 94
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.5 bits (75), Expect = 0.035, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+G FGVV+ K + A+K I E R+ EV+ L+++ HP IV+ +
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 71
Query: 61 ACTGNP 66
A P
Sbjct: 72 AWLETP 77
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.1 bits (74), Expect = 0.035, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 87
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 133
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.035, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
+ N + +VMEY GG +++ L+R
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
+ N + +VMEY GG +++ L+R
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 7 IVGQGAFG--VVWKGLWQNQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIVKLYGA 61
++G GAF ++ + + VA+K I E + + E+ L ++ HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 62 C-TGNPVCLVMEYAEGGSLYNEL 83
+G + L+M+ GG L++ +
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI 107
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With A Beta-Carboline
Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein
Kinase 3 (Dapk3) In Complex With An Imidazo-Pyridazine
Ligand
Length = 283
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 37 RKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLYN 81
R+ EV L + HPNI+ L+ V L++E GG L++
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFGVVW--KGLWQNQYVAVKHIETEAERKAFAVE-----VRQLSRVSHPNIVKL 58
K +G G+FG V K + + A+K ++ + K +E R L V+ P +VKL
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQR 85
+ N + +VMEY GG +++ L+R
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 37 RKAFAVEVRQLSRVSHPNIVKLYGACTG-NPVCLVMEYAEGGSLYN 81
R+ EV L + HPNI+ L+ V L++E GG L++
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 118
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 6 KIVGQGAFGVVWKGLWQ------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
+ +G+G FG V + + VAVK ++ + R + E+ L + H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 57 KLYGACTGN---PVCLVMEYAEGGSLYNELQRSS 87
K G C + LVMEY GSL + L R S
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS 113
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 6 KIVGQGAFGVVWKGLWQ------NQYVAVKHIETEA---ERKAFAVEVRQLSRVSHPNIV 56
+ +G+G FG V + + VAVK ++ + R + E+ L + H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 57 KLYGACTGN---PVCLVMEYAEGGSLYNELQRSS 87
K G C + LVMEY GSL + L R S
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS 113
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 8 VGQGAFGVV--WKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGACTGN 65
+G+G+FG V K AVK + E R E+ + +S P IV LYGA
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---VEELVACAGLSSPRIVPLYGAVREG 136
Query: 66 P-VCLVMEYAEGGSL 79
P V + ME EGGSL
Sbjct: 137 PWVNIFMELLEGGSL 151
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.1 bits (74), Expect = 0.037, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE----TEAE----RKAFAVEVRQLSRVSHPNIVK 57
+G+G F V+K +N Q VA+K I+ +EA+ R A E++ L +SHPNI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELSHPNIIG 76
Query: 58 LYGA 61
L A
Sbjct: 77 LLDA 80
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.1 bits (74), Expect = 0.038, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 93
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 139
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.1 bits (74), Expect = 0.039, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 147
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 8 VGQGAFGVVW--KGLWQNQYVAVKHIE---TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+G FGVV+ K + A+K I E R+ EV+ L+++ HP IV+ + A
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.041, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.041, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.1 bits (74), Expect = 0.041, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.043, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.1 bits (74), Expect = 0.043, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 121
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 167
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.1 bits (74), Expect = 0.045, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.046, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 93
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 127
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.7 bits (73), Expect = 0.047, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 95
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 129
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.047, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.7 bits (73), Expect = 0.047, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 121
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +VMEY GG +++ L+R S + Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 167
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.7 bits (73), Expect = 0.048, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 100
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE------TEAER---KAFAVEVRQLSRVSHPNIV 56
+GQG F ++KG+ + Y + E +A R ++F +S++SH ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 57 KLYGACT-GNPVCLVMEYAEGGSLYNELQRS 86
YG C G+ LV E+ + GSL L+++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 8 VGQGAFGVVW--KGLWQNQYVAVKHI-----ETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G G+FG V+ + + ++ VA+K + ++ + + EVR L ++ HPN ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 61 A-CTGNPVCLVMEYAEGGS 78
+ LVMEY G +
Sbjct: 83 CYLREHTAWLVMEYCLGSA 101
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2:
D835n Inactivating Mutant In Apo Form
Length = 303
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 7 IVGQGAFGVVWK--GLWQNQYVAVKHIE-TEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
++GQGAFG V K ++Y A+K I TE + EV L+ ++H +V+ Y A
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.7 bits (73), Expect = 0.054, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
K +G G+FG V K L + + V +K IE K R L V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK------RILQAVNF 121
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQR 85
P +VKL + N + +VMEY GG +++ L+R
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 155
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVKL 58
+G GA+G V+K + +VA+K + + + +R+L HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 59 YGACTGN------PVCLVMEYAE 75
C + V LV E+ +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD 94
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIE------TEAER---KAFAVEVRQLSRVSHPNIV 56
+GQG F ++KG+ + Y + E +A R ++F +S++SH ++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 57 KLYGAC-TGNPVCLVMEYAEGGSLYNELQRS 86
YG C G+ LV E+ + GSL L+++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWK--GLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + Q A K I T+ + + E R + HPNIV+L+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 62 CTGNPVC-LVMEYAEGGSLYNEL 83
+ LV + GG L+ ++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI 94
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVKL 58
+G GA+G V+K + +VA+K + + + +R+L HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 59 YGACTGN------PVCLVMEYAE 75
C + V LV E+ +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD 94
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEAERKAFAVE-------VRQLSRVSHPNIVKL 58
+G GA+G V+K + +VA+K + + + +R+L HPN+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 59 YGACTGN------PVCLVMEYAE 75
C + V LV E+ +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVD 94
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 8 VGQGAFGVV----WKGLWQNQ--YVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N VAVK ++ +++ F E++ L + IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 60 GAC--TGNP-VCLVMEYAEGGSLYNELQRSSA 88
G G P + LVMEY G L + LQR A
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA 106
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 8 VGQGAFGVV----WKGLWQNQ--YVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N VAVK ++ +++ F E++ L + IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQRSSA 88
G G + LVMEY G L + LQR A
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 109
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.0 bits (71), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 8 VGQGAFGVV----WKGLWQNQ--YVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N VAVK ++ +++ F E++ L + IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQRSSA 88
G G + LVMEY G L + LQR A
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 110
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVWKGLWQN---QYVA--VKHIETEAERKAFAVE-----VRQLSRVSHPNIVK 57
+G G F VV K ++ QY A +K T++ R+ + E V L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 58 LYGACTG-NPVCLVMEYAEGGSLYN 81
L+ V L+ E GG L++
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFD 103
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRK 122
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRK 107
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRK 122
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRK 100
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRK 101
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 30/97 (30%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR---------------- 49
+ +G+GA+G V +AV + EA AV++ + R
Sbjct: 13 QTLGEGAYGEV--------QLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEICINK 60
Query: 50 -VSHPNIVKLYG-ACTGNPVCLVMEYAEGGSLYNELQ 84
++H N+VK YG GN L +EY GG L++ ++
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With
Inhibitor 38
Length = 322
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 30/97 (30%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR---------------- 49
+ +G+GA+G V +AV + EA AV++ + R
Sbjct: 12 QTLGEGAYGEV--------QLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEICINK 59
Query: 50 -VSHPNIVKLYG-ACTGNPVCLVMEYAEGGSLYNELQ 84
++H N+VK YG GN L +EY GG L++ ++
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRK 102
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 6 KIVGQGAFGVVWKG--LWQNQYVAVKHIETE---AERKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G G F V + + VA+K ++ ++ E+ L + H +I +LY
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 61 AC-TGNPVCLVMEYAEGGSLYN 81
T N + +V+EY GG L++
Sbjct: 76 VLETANKIFMVLEYCPGGELFD 97
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + KAF E++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + KAF E++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFA-VEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + KAF E++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK 125
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRK 128
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRK 123
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRK 103
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRK 123
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK 125
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRK 123
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRK 126
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRK 123
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWK--GLWQNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + Q A K I T+ + + E R + HPNIV+L+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 62 CTGN-PVCLVMEYAEGGSLYNEL 83
+ L+ + GG L+ ++
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDI 112
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYV--AVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + + + A K I T+ + + E R ++ HPNIV+L+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 62 CTGNPVC-LVMEYAEGGSLYNEL 83
LV + GG L+ ++
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDI 96
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK 125
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK 125
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 8 VGQGAFGVVW------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G GAFG V GL + + ++ + E+ L + HPNI+K++
Sbjct: 30 LGSGAFGDVHLVEERSSGL-ERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 62 CTG-NPVCLVMEYAEGGSLYNELQRSSA 88
+ + +VME EGG L + + A
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQA 116
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRK 126
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYV--AVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + + + A K I T+ + + E R ++ HPNIV+L+ +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 62 CTGNPVC-LVMEYAEGGSLYNEL 83
LV + GG L+ ++
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDI 95
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRK 125
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 43 EVRQLSRVSHPNIVKLYGACTGNP-VCLVMEYAEGGSLYNEL 83
E+ L + HPNI+KL+ LV E+ EGG L+ ++
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 5 SKIVGQGAFGVVWKGLWQNQ-----YVAVKHIE--TEAER-KAFAVEVRQLSRVSHPNIV 56
+++G+G FGVV+ G + +Q A+K + TE ++ +AF E + ++HPN++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 57 KLYG 60
L G
Sbjct: 86 ALIG 89
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYV--AVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + + + A K I T+ + + E R ++ HPNIV+L+ +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 62 CTGNPVC-LVMEYAEGGSLYNEL 83
LV + GG L+ ++
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDI 96
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + + Q A K I T+ + + E R + HPNIV+L+ +
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 62 CTGNPV-CLVMEYAEGGSLYNEL 83
+ LV + GG L+ ++
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDI 121
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ + ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIE-----------TEAERKAFAVEVRQLSRVSHPN 54
K +G GA+G V L +++ V H+E + + EV L + HPN
Sbjct: 43 KKLGSGAYGEVL--LCRDK---VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 55 IVKLYGACTGN-PVCLVMEYAEGGSLYNEL 83
I+KLY LVME +GG L++E+
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEI 127
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.8 bits (68), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRK 130
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 6 KIVGQGAFG--VVWKGLWQNQYVAVK-----HIETEAERKAFAVEVRQLSRVSHPNIVKL 58
KI+G+G+F V+ + L ++ A+K HI E + E +SR+ HP VKL
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 59 YGACTGN-PVCLVMEYAEGGSLYNELQR 85
Y + + + YA+ G L +++
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRK 125
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 8 VGQGAFGVV----WKGLWQNQ--YVAVKHIETEA--ERKAFAVEVRQLSRVSHPNIVKLY 59
+G+G FG V + L N VAVK ++ +++ F E++ L + IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 60 GACTG---NPVCLVMEYAEGGSLYNELQRSSA 88
G G + LVMEY G L + LQR A
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA 122
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle
Checkpoint Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As
Potent Chk1 Inhibitors
Length = 295
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
Length = 271
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLW--QNQYVAVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + Q A K I T+ + + E R + HPNIV+L+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 62 CTGNPV-CLVMEYAEGGSLYNEL 83
+ LV + GG L+ ++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI 94
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIE 95
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human
Chk1 Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human
Chk1 Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE---RKAFAVEVRQLSRVSHPNIVKLYG 60
+ +G+GA+G V + + + VAVK ++ + + E+ ++H N+VK YG
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 61 -ACTGNPVCLVMEYAEGGSLYNELQ 84
GN L +EY GG L++ ++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 78
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 83
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 106
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 116
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 114
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 97
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 112
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 112
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 157
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 86
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 90
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b
Inhibitor That Attenuates Hyperactivity In Clock Mutant
Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 78
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 90
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 82
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 78
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 79
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 78
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 30.4 bits (67), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 5 SKIVGQGAFGVVWKGLW--QNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
+K++G G+FGVV++ + VA+K + + K +++ + ++ H NIV+L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI--MRKLDHCNIVRL 91
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 30/97 (30%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSR---------------- 49
+ +G+GA+G V +AV + EA AV++ + R
Sbjct: 12 QTLGEGAYGEV--------QLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEICINK 59
Query: 50 -VSHPNIVKLYG-ACTGNPVCLVMEYAEGGSLYNELQ 84
++H N+VK YG GN L +EY GG L++ ++
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 6 KIVGQGAFGVVWKGLWQ------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIV 56
+ +G+G FG V + + VAVK ++ R + E+ L + H +IV
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 57 KLYGACTGN---PVCLVMEYAEGGSLYNELQR 85
K G C V LVMEY GSL + L R
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR 106
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 6 KIVGQGAFGVVWKGLWQ------NQYVAVKHIET---EAERKAFAVEVRQLSRVSHPNIV 56
+ +G+G FG V + + VAVK ++ R + E+ L + H +IV
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 57 KLYGACTGN---PVCLVMEYAEGGSLYNELQR 85
K G C V LVMEY GSL + L R
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR 105
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 8 VGQGAFGVVWKGLWQNQYV--AVKHIETEA----ERKAFAVEVRQLSRVSHPNIVKLYGA 61
+G+GAF VV + + + + A K I T+ + + E R ++ HPNIV+L+ +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 62 CTGNPV-CLVMEYAEGGSLYNEL 83
LV + GG L+ ++
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDI 119
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 50 VSHPNIVKLYG-ACTGNPVCLVMEYAEGGSLYNELQ 84
++H N+VK YG GN L +EY GG L++ ++
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 6 KIVGQGAFGVVW-------------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH 52
+ +G G+FG V K L + + V +K IE K R V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK------RIQQAVNF 101
Query: 53 PNIVKLYGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
P +VKL + N + +V+EYA GG +++ L+R S + Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY 147
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 11/62 (17%)
Query: 6 KIVGQGAFGVVWKGLWQ---NQYV--AVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+++G G FG V+K + YV VK+ +AER EV+ L+++ H NIV Y
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER-----EVKALAKLDHVNIVH-YN 71
Query: 61 AC 62
C
Sbjct: 72 GC 73
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 11/62 (17%)
Query: 6 KIVGQGAFGVVWKGLWQ---NQYV--AVKHIETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+++G G FG V+K + YV VK+ +AER EV+ L+++ H NIV Y
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER-----EVKALAKLDHVNIVH-YN 70
Query: 61 AC 62
C
Sbjct: 71 GC 72
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 6 KIVGQGAFGVVWKGLWQNQYVAVKHIET------EAERKAFAVEVRQLSRVSHPNIVKLY 59
+I +G FG VWK N +VAVK ++ER+ F+ + H N+++
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFST-----PGMKHENLLQFI 75
Query: 60 -----GACTGNPVCLVMEYAEGGSLYNELQRSSAASLKFCKI 96
G+ + L+ + + GSL + L+ + + C +
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV 117
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 20/87 (22%)
Query: 8 VGQGAFGVVWKGLWQN--QYVAVKHIETE-----------AERKAFAVEVRQLSRVSHPN 54
+G GA+G V+K + +VA+K + + + A+ +R+L HPN
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-LRRLEAFEHPN 75
Query: 55 IVKLYGACTGN------PVCLVMEYAE 75
+V+L C + V LV E+ +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVD 102
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 6 KIVGQGAFGVVW-------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
K++G+GAFG V + ++ + ++ + ++ F E ++ + P +V+L
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 59 YGACTGNP-VCLVMEYAEGGSLYNELQRSSAASLKFCKIY 97
+ A + + +VMEY GG L N L + K+ K Y
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFY 179
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 8 VGQGAFGVVW---KGLWQNQYVAV----KHIETEAERKAFAVEVRQLSRVSHPNIVKLYG 60
+G+GAF VV K L +Y A+ K + +K E R + HPNIV+L+
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHD 77
Query: 61 ACT--GNPVCLVMEYAEGGSLYNEL 83
+ + G+ L+ + GG L+ ++
Sbjct: 78 SISEEGHHY-LIFDLVTGGELFEDI 101
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 6 KIVGQGAFGVVWKG-------LWQNQYVAVKHIETEAERKAFAVEVRQLSRV-SHPNIVK 57
+++G+G+FG V L+ + + I + + + E R LS +HP + +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 58 LYGACTGNP--VCLVMEYAEGGSLYNELQRS 86
L+ C P + VME+ GG L +Q+S
Sbjct: 89 LF-CCFQTPDRLFFVMEFVNGGDLMFHIQKS 118
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 26.9 bits (58), Expect = 2.5, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 8 VGQGAFGVVWKGLWQNQYV----AVKHIETEAERKAFAVEVRQLSRVSHPNIV---KLYG 60
VG+G +G V+K ++ A+K IE + E+ L + HPN++ K++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 61 ACTGNPVCLVMEYAE 75
+ V L+ +YAE
Sbjct: 89 SHADRKVWLLFDYAE 103
>pdb|3ESH|A Chain A, Crystal Structure Of A Probable Metal-Dependent
Hydrolase From Staphylococcus Aureus. Northeast
Structural Genomics Target Zr314
pdb|3ESH|B Chain B, Crystal Structure Of A Probable Metal-Dependent
Hydrolase From Staphylococcus Aureus. Northeast
Structural Genomics Target Zr314
pdb|3ESH|C Chain C, Crystal Structure Of A Probable Metal-Dependent
Hydrolase From Staphylococcus Aureus. Northeast
Structural Genomics Target Zr314
Length = 280
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 3 GGSKIVGQGAFGVVWKGLWQNQYVA 27
G +K G FGVV K LW QY A
Sbjct: 14 GNTKXDGGAXFGVVPKPLWSKQYNA 38
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 6 KIVGQGAFGVVW-------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
K++G+GAFG V + ++ + ++ + ++ F E ++ + P +V+L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 59 YGACTGNP-VCLVMEYAEGGSLYN 81
+ A + + +VMEY GG L N
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVN 163
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 6 KIVGQGAFGVVW-------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
K++G+GAFG V + ++ + ++ + ++ F E ++ + P +V+L
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 59 YGACTGNP-VCLVMEYAEGGSLYN 81
+ A + + +VMEY GG L N
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVN 158
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 6 KIVGQGAFGVVW-------KGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSHPNIVKL 58
K++G+GAFG V + ++ + ++ + ++ F E ++ + P +V+L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 59 YGACTGNP-VCLVMEYAEGGSLYN 81
+ A + + +VMEY GG L N
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVN 163
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 7 IVGQGAFGVVW----KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
++G+G+FG V KG ++ AVK ++ + + + VE R L+ P +
Sbjct: 348 VLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 58 LYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
+C T + + VMEY GG L +Q+
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 435
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 7 IVGQGAFGVVW----KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
++G+G+FG V KG ++ AVK ++ + + + VE R L+ P +
Sbjct: 27 VLGKGSFGKVMLSERKG--TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 58 LYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
+C T + + VMEY GG L +Q+
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 114
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 7 IVGQGAFGVVW----KGLWQNQYVAVKHIETEA-----ERKAFAVEVRQLSRVSHPNIVK 57
++G+G+FG V KG + A+K ++ + + + VE R L+ + P +
Sbjct: 26 VLGKGSFGKVMLADRKG--TEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 58 LYGAC--TGNPVCLVMEYAEGGSLYNELQR 85
+C T + + VMEY GG L +Q+
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ 113
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 87
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence
Of P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 79
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 87
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor
Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo
Pyridazine Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 92
>pdb|2O48|X Chain X, Crystal Structure Of Mammalian Dimeric Dihydrodiol
Dehydrogenase
pdb|2O4U|X Chain X, Crystal Structure Of Mammalian Dimeric Dihydrodiol
Dehydrogenase
pdb|2POQ|X Chain X, Dimeric Dihydrodiol Dehydrogenase Complexed With
Inhibitor, Isoascorbic Acid
pdb|3OHS|X Chain X, Crystal Structure Of Mammalian Dimeric Dihydrodiol
Dehydrogenase In Complex With Dihydroxyacetone
Length = 334
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 14 GVVWKGLWQNQYVAVKHIETEAERKAFAVEVRQLSRVSH----PNIVKLYGA 61
G+V GL + + AV +E + AV R LSR +I K YG+
Sbjct: 6 GIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGS 57
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With
Amppnp And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 72
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 73
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And The Jnk Inhibitor V
Length = 314
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 73
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Beta Carboline Ligand Ii
Length = 314
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 73
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 72
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine
Threonine Kinase (Pim1) In Complex With A Consensus
Peptide And A Naphtho-Difuran Ligand
Length = 313
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 73
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 72
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 72
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With
Amp-Pnp At 2.1 A Resolution
Length = 300
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 59
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 59
>pdb|2KV8|A Chain A, Solution Structure Ofrgs12 Pdz Domain
Length = 83
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 34 EAERKAFAVEVRQLSRVSHPNIVKLYGACTGNPVCLVMEYAEG 76
A + AV + + SH ++VKL G C+G L M AEG
Sbjct: 42 RAGDQILAVNEINVKKASHEDVVKLIGKCSG---VLHMVIAEG 81
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With
Inhibitor (Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With
Inhibitor (Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 45
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 45
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones
As Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 45
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A
Target Of Aberrant Somatic Hypermutations In Diffuse
Large Cell Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 44
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 44
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 67
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 40
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 40
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 43
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 7 IVGQGAFGVVWKGLW--QNQYVAVKHIETE 34
++G G FG V+ G+ N VA+KH+E +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 40
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-RKAFAVEVRQLSRV 50
K++G+G+FG V K +Q+VA+K + E + A E+R L +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 6 KIVGQGAFGVVWKGLWQ--NQYVAVKHIETEAE-RKAFAVEVRQLSRV 50
K++G+G+FG V K +Q+VA+K + E + A E+R L +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
>pdb|1I60|A Chain A, Structural Genomics, Ioli Protein
pdb|1I6N|A Chain A, 1.8 A Crystal Structure Of Ioli Protein With A Binding
Zinc Atom
Length = 278
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 36 ERKAFAVEV-RQLSRVSHPNIVKLYGACTGNPVCLVMEYAEGGSLYNELQRSS 87
E K +V+V +LS ++ P VK+ G+P C V + + + N + R +
Sbjct: 116 EIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDN 168
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 35 AERKAFAVEVRQLSRVSHPNIVKLY 59
AE++ F + ++L +V +P I KLY
Sbjct: 54 AEKEEFEHQQKELEKVCNPIITKLY 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,116,290
Number of Sequences: 62578
Number of extensions: 101528
Number of successful extensions: 1444
Number of sequences better than 100.0: 763
Number of HSP's better than 100.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 391
Number of HSP's that attempted gapping in prelim test: 729
Number of HSP's gapped (non-prelim): 764
length of query: 106
length of database: 14,973,337
effective HSP length: 71
effective length of query: 35
effective length of database: 10,530,299
effective search space: 368560465
effective search space used: 368560465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)