BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9378
(522 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27117|DCOR_BOVIN Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
Length = 461
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 198/304 (65%), Gaps = 33/304 (10%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G+I++KH W LPRV P+YAVKCNDS+ +++ LAA+GTGFDCASK
Sbjct: 37 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G+ MTFD+E+EL KV + HP A+LV+RI
Sbjct: 97 LVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK LD+DV+GVSFHVGSGC DP F +AI A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMN--RIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G +GF+M +LD+GGG+PG + I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILGANS-------SVPTHTMYYINDGVYGSFNCIIYDHAV 477
GRYYVASAFTLA I +K+ +L + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 276 GRYYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCILYDHAH 335
Query: 478 CTPI 481
P+
Sbjct: 336 VKPL 339
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYY 407
Query: 65 VIEEHIWLMLK 75
V+ W +++
Sbjct: 408 VMSGPTWQLMQ 418
>sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
Length = 461
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/304 (50%), Positives = 197/304 (64%), Gaps = 33/304 (10%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G+I++KH W LPRV P+YAVKCNDS+ +++ LAA GTGFDCASK
Sbjct: 37 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G+ MTFD+E+EL KV + HP A+LV+RI
Sbjct: 97 LVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK L++DVVGVSFHVGSGC DP F +AI A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMN--RIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G +GFSM +LD+GGG+PG + I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILGANS-------SVPTHTMYYINDGVYGSFNCIIYDHAV 477
GRYYVASAFTLA I +K+ +L + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 276 GRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAH 335
Query: 478 CTPI 481
P+
Sbjct: 336 VKPL 339
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYY 407
Query: 65 VIEEHIWLMLK 75
V+ W +++
Sbjct: 408 VMSGPAWQLMQ 418
>sp|P09057|DCOR_RAT Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1
Length = 461
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 194/299 (64%), Gaps = 33/299 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G++++KH W LPRV P+YAVKCNDS+ ++ LAA+GTGFDCASK
Sbjct: 37 KDAFYVADLGDVLKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G+ MTFD+EIEL KV + HP A+LV+RI
Sbjct: 97 LVQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK L++DV+GVSFHVGSGC DP F +A+ A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G +GFSM +LD+GGG+PG T I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILGANS-------SVPTHTMYYINDGVYGSFNCIIYDHA 476
GRYYVASAFTLA I +K+ + + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 276 GRYYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHA 334
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 407
Query: 65 VIEEHIWLMLK 75
V+ +W ++K
Sbjct: 408 VMSRSMWQLMK 418
>sp|P27119|DCOR_MUSPA Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1
Length = 461
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/299 (51%), Positives = 193/299 (64%), Gaps = 33/299 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G+I++KH W LPRV P+YAVKCNDS+ ++ LAA GTGFDCASK
Sbjct: 37 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G+ MTFD+EIEL KV + HP A+LV+RI
Sbjct: 97 LVQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK L++DV+GVSFHVGSGC DP F +A+ A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G +GFSM +LD+GGG+PG T I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILG-------ANSSVPTHTMYYINDGVYGSFNCIIYDHA 476
GRYYVASAFTLA I +K+ + + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 276 GRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHA 334
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 407
Query: 65 VIEEHIWLMLK 75
V+ +W ++K
Sbjct: 408 VMSRPMWQLMK 418
>sp|P00860|DCOR_MOUSE Ornithine decarboxylase OS=Mus musculus GN=Odc1 PE=1 SV=2
Length = 461
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 193/299 (64%), Gaps = 33/299 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G+I++KH W LPRV P+YAVKCNDS+ ++ LAA+GTGFDCASK
Sbjct: 37 KDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G+ MTFD+EIEL KV + HP A+LV+RI
Sbjct: 97 LVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK L++DV+GVSFHVGSGC DP F +A+ A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+ +GFSM +LD+GGG+PG T I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILG-------ANSSVPTHTMYYINDGVYGSFNCIIYDHA 476
GRYYVASAFTLA I +K+ + + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 276 GRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHA 334
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 348 EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 407
Query: 65 VIEEHIWLMLK 75
V+ +W ++K
Sbjct: 408 VMSRPMWQLMK 418
>sp|P07805|DCOR_TRYBB Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2
Length = 423
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 197/304 (64%), Gaps = 33/304 (10%)
Query: 211 DAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS------ 264
D F+V D+G+IVRKHE WK LPRV P+YAVKCND VL LAALGTGFDCAS
Sbjct: 36 DPFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQR 95
Query: 265 -----------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRC 307
K ISHIRYA + G+D MTFD EL+KV + HP A++V+RI
Sbjct: 96 VRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIST 155
Query: 308 DAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSAR 367
D +A+C+L +KFG + + +L AK L++DV GVSFHVGSG D F +AI +R
Sbjct: 156 DDSLARCRLSVKFGA-KVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 214
Query: 368 QIFDLGNSLGFSMRVLDLGGGYPGYTGYSMN--RIAEIINVALDEYFPVEEGVSIIAEPG 425
+FD+G LGF+M +LD+GGG+PG + IA +IN AL+++FP + ++I+AEPG
Sbjct: 215 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 274
Query: 426 RYYVASAFTLATLIHSKRDILGANSSVPTHT-------MYYINDGVYGSFNCIIYDHAVC 478
RYYVASAFTLA + +K+ G + V H MYY+NDGVYGSFNCI+YDHAV
Sbjct: 275 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 334
Query: 479 TPIP 482
P+P
Sbjct: 335 RPLP 338
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E L PSSVWGPTCDGLD++ + LPEM VG WL++ DMGAYT+ S+FNGF P ++
Sbjct: 346 EKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYY 405
Query: 65 VIE---EHIWLMLKDR 77
V+ +H+ LK +
Sbjct: 406 VVSGLPDHVVRELKSQ 421
>sp|P27118|DCOR_CHICK Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2
SV=1
Length = 450
Score = 288 bits (736), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 194/304 (63%), Gaps = 33/304 (10%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G+IV+KH W LPRV P+YAVKCNDS+ V++ LA LG GFDCASK
Sbjct: 27 KDAFYVADLGDIVKKHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQ 86
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I++AA G+ MTFD+E+EL K+ + HP A+L++RI
Sbjct: 87 LVQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRIT 146
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK LDL +VGVSFHVGSGC DP F +AI A
Sbjct: 147 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDA 205
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMN--RIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G LGF+M +LD+GGG+PG + I +IN ALD+YFP++ V+IIAEP
Sbjct: 206 RCVFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEP 265
Query: 425 GRYYVASAFTLATLIHSKRDILGANSSVPTHT-------MYYINDGVYGSFNCIIYDHAV 477
GRYYVASAFTLA I +K+ + + MYY+NDGVYGSFNCI+YDHA
Sbjct: 266 GRYYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAH 325
Query: 478 CTPI 481
P+
Sbjct: 326 VKPV 329
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 11 SVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEEHI 70
S+WGPTCDGLD++ + +PE+ VG W+++ +MGAYT+ ASTFNGF P +H V+
Sbjct: 344 SIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAAASTFNGFQRPTIHYVMSRPA 403
Query: 71 WLMLKDRLPLTQDHFIKE 88
W +++ + + F+ E
Sbjct: 404 WQLMQQ---IKEQEFLAE 418
>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-a PE=2 SV=1
Length = 460
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 194/305 (63%), Gaps = 34/305 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D G+IV+KH W LPRV P+YAVKCND + +++ L+ LG GFDCASK
Sbjct: 37 KDAFYVADFGDIVKKHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQ 96
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
+S I+YAA G++ MTFD+E+EL KV + HP A+LV+RI
Sbjct: 97 LVQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D A C+L +KFG + + LL AK L++D++GVSFHVGSGC DP + +A+ A
Sbjct: 157 TDDSKAVCRLSVKFGA-TLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMN--RIAEIINVALDEYFPVEEGVSIIAEP 424
R +FD+G LGF+M +LD+GGG+PG + I +IN ALD+YFP + GV IIAEP
Sbjct: 216 RCVFDMGAELGFNMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEP 275
Query: 425 GRYYVASAFTLATLIHSKRDILGANSSVPTHT--------MYYINDGVYGSFNCIIYDHA 476
GRYYVAS+FTLA I +K+ ++ S MYY+NDGVYGSFNCI++DHA
Sbjct: 276 GRYYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHA 335
Query: 477 VCTPI 481
P+
Sbjct: 336 HVKPV 340
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPE+ VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 349 EKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRPTLYY 408
Query: 65 VIEEHIWLMLKD 76
V+ W ++ D
Sbjct: 409 VMSRPHWQLMHD 420
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/301 (47%), Positives = 192/301 (63%), Gaps = 31/301 (10%)
Query: 211 DAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP---- 266
DAF+V D+G++VRKH + LPRV P+YAVKCN S+ V+++LA LG GFDCASK
Sbjct: 37 DAFFVADLGDVVRKHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96
Query: 267 -------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRC 307
IS I+YAA+ G+ MTFDNE+EL KV + HP A++V+RI
Sbjct: 97 VQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIAT 156
Query: 308 DAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSAR 367
D + +L +KFG P+ RLL +AK+L +DV+GVSFHVGSGC D + +AI AR
Sbjct: 157 DDSKSSARLSVKFGA-PLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAISDAR 215
Query: 368 QIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVALDEYFPVEEGVSIIAEPG 425
+F++ + G+ M +LD+GGG+PG + IA +IN ALD YFP V IIAEPG
Sbjct: 216 LVFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPESSDVQIIAEPG 275
Query: 426 RYYVASAFTLATLIHSKRDILGANS-----SVPTHTMYYINDGVYGSFNCIIYDHAVCTP 480
RYYVASAF+LA + +K+++ + S MYY+NDGVYGSFNC+++DHA P
Sbjct: 276 RYYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNCLVFDHAHPKP 335
Query: 481 I 481
I
Sbjct: 336 I 336
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 7 LVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVI 66
L SS+WGPTCDGLD++ + + LPE+ VG WL++ +MGAYT+ +S FNGF VH +
Sbjct: 347 LYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASSNFNGFQQSPVHYAM 406
Query: 67 EEHIW---LMLKDRLPLTQDHFIKEN 89
W +L+ L T++ KEN
Sbjct: 407 PRAAWKAVQLLQRGLQQTEE---KEN 429
>sp|P14019|DCOR_CRIGR Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3
Length = 455
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 190/302 (62%), Gaps = 34/302 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
+DAFYV D+G++++KH W LP V P+YAVKCNDS+ ++ LAA+ DCASK
Sbjct: 36 KDAFYVADLGDVLKKHLRWLKALP-VTPFYAVKCNDSRALVNTLAAITV--DCASKTEIQ 92
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHP-TAQLVIRI 305
+S I+YAA G+ MTFD+EIEL KV + HP +LV+RI
Sbjct: 93 LVQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKVTKLVLRI 152
Query: 306 RCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYS 365
D A C+L +KFG + + LL AK L++DV+GVSFHVGSGC DP F +A+
Sbjct: 153 ATDDSKAVCRLSVKFGA-TLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSD 211
Query: 366 ARQIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVALDEYFPVEEGVSIIAE 423
AR +FD+G +GFSM +LD+GGG+PG T I +IN ALD+YFP + GV +IAE
Sbjct: 212 ARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPDSGVRVIAE 271
Query: 424 PGRYYVASAFTLATLIHSKRDILGA----NSSVPTHTMYYINDGVYGSFNCIIYDHAVCT 479
PGRYYVASAFTLA I +K+ + + S MYY+NDGVYGSFNCI+YDHA
Sbjct: 272 PGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 331
Query: 480 PI 481
P+
Sbjct: 332 PL 333
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E SS+WGPTCDGLD++ + LPEM VG W+++ +MGAYT+ ASTFNGF P ++
Sbjct: 342 EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSIYY 401
Query: 65 VIEEHIWLMLK 75
V+ +W ++K
Sbjct: 402 VMSRPMWQLMK 412
>sp|P40807|DCOR1_DROME Ornithine decarboxylase 1 OS=Drosophila melanogaster GN=Odc1 PE=1
SV=3
Length = 394
Score = 265 bits (678), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/291 (45%), Positives = 179/291 (61%), Gaps = 25/291 (8%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASK---- 265
+ A + D+ + RK W+ LPR+ P+YAVKCND MV+ +LA LG GFDCASK
Sbjct: 30 DQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVK 89
Query: 266 -------------------PISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
P+SH+ YA E+ + T DNE E+ K+ +P + L++R +
Sbjct: 90 LVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFK 149
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+A+ AQC LG KFGCD +A L+ LAKSL+L V G SFHVGSGC + + RAI A
Sbjct: 150 SEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKA 209
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
+ +F G LG+ M LD+GGG+PG +IAE +N ++ +FP +E V IIAEPGR
Sbjct: 210 KNLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFP-DERVHIIAEPGR 268
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAV 477
++VA+A TL IH+KR+I + T MYY+NDGVYGSFNCI+YDH V
Sbjct: 269 FFVAAACTLVCKIHAKREIRNEAGKLDT-VMYYLNDGVYGSFNCILYDHQV 318
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 8 VPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKV 62
+ S +WGP+CD LDK+++D+ LP + G L +R+MGAYT+P+AS FNGF +PK
Sbjct: 334 LKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKT 388
>sp|P49725|DCOR_PANRE Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1
Length = 435
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 181/316 (57%), Gaps = 32/316 (10%)
Query: 192 DDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLE 251
D+ T V +D F V++V I+ K W+ +PRV P YAVKCND +++L
Sbjct: 26 DNKTVATAIAATRTVNGNDDPFVVMNVSTIMAKVIQWQRTMPRVAPCYAVKCNDDKVLLR 85
Query: 252 VLAALGTGFDCASKP----------------------ISHIRYAAEYGIDTMTFDNEIEL 289
LA LG GFDCASK I +A G+ MTFD+ EL
Sbjct: 86 TLADLGMGFDCASKAEIEKVIGLVGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEEL 145
Query: 290 QKVKQFHPTAQLVIRIRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHV 349
K+KQ H L++RI AQCQLG+KFGCDP + AP+LLR A + ++V+G+SFHV
Sbjct: 146 TKIKQNHADPSLILRISVSDPTAQCQLGIKFGCDPETVAPKLLRKAADMGMNVIGISFHV 205
Query: 350 GSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGY--TGYSMNRIAEIINVA 407
GSGC +P F A+ AR +FDLG SLG SM +LD+GGG+PG S++ A +IN A
Sbjct: 206 GSGCNEPATFRTALEYARGLFDLGISLGLSMTLLDIGGGFPGVDTAHISLDACAAVINPA 265
Query: 408 LDEYFPVEE--GVSIIAEPGRYYVASAFTLAT------LIHSKRDILGANSSVPTHTMYY 459
L+E FP++ V +IAEPGRY+ +A ++ T + + R A+ MYY
Sbjct: 266 LEELFPLDSCPDVEVIAEPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYY 325
Query: 460 INDGVYGSFNCIIYDH 475
+NDGVYGSFNC ++DH
Sbjct: 326 MNDGVYGSFNCKLFDH 341
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHA 64
E P VWGPTCDGLD+V + ++P + G WL Y DMGAYT ASTFNGF PK +
Sbjct: 356 EPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYTSVAASTFNGFDKPKTYY 415
Query: 65 VIEE 68
I+E
Sbjct: 416 FIDE 419
>sp|P27121|DCOR_NEUCR Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=spe-1
PE=2 SV=1
Length = 484
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 181/305 (59%), Gaps = 42/305 (13%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP--- 266
ED F+V D+GE+ R+H WKL LPRV P+YAVKC+ + +L++LAALGTGFDCASK
Sbjct: 82 EDTFFVADLGEVYRQHLRWKLNLPRVKPFYAVKCHPDERLLQLLAALGTGFDCASKAEIE 141
Query: 267 --------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
S++RY A+ G+ MTFDN EL+K+ + +P A+L +RI
Sbjct: 142 QVLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRIL 201
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D + C+ MKFG + LL LA+ L L+VVGVSFHVGSG DP F +A+ A
Sbjct: 202 TDDSSSLCRFSMKFGA-SLDSTDGLLGLARQLGLNVVGVSFHVGSGASDPTAFLKAVQDA 260
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
+F + G+S++ LD+GGG+ + S ++A ++ ALDEYFP GV++IAEPGR
Sbjct: 261 HVVFQQAAAYGYSLKTLDVGGGFC--SDDSFEQMANVLRAALDEYFPAHTGVNLIAEPGR 318
Query: 427 YYVASAFTLATLIHSKRDILGA----------------NSSVPTHTMYYINDGVYGSFNC 470
YY +SAFTLA I ++R I ++ M Y+NDG+YG+F+
Sbjct: 319 YYASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYVNDGLYGNFSS 378
Query: 471 IIYDH 475
I++DH
Sbjct: 379 IMFDH 383
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 5 ETLVPSSVWGPTCDGLDKVNDDILLPE-MPVGSWLIYRDMGAYTLPVASTFNGFP 58
E + S+WGPTCDG+D++ + I E + VG WL + DMGAYT A+TFNGF
Sbjct: 410 EDAIEYSIWGPTCDGIDRITESIRFREILDVGDWLYFEDMGAYTKCSATTFNGFS 464
>sp|Q9UQW9|DCOR_SCHPO Ornithine decarboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=spe1 PE=2 SV=1
Length = 432
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/289 (45%), Positives = 178/289 (61%), Gaps = 34/289 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASK---- 265
DAF+V D+ + R+ W KLPRV P+YAVKCN VL +L GTGFDCASK
Sbjct: 66 SDAFFVADLNGVYRQLLRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKGELE 125
Query: 266 -------------------PISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
I+++RYAA GI+ MTFDN EL KVKQ HP ++L++RI
Sbjct: 126 QILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRIS 185
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D + C+L +KFG + + +LL +AKSL+L+VVGVSFHVGSG DP F AI +
Sbjct: 186 TDDSNSLCRLSLKFGA-SLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRS 244
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
RQ+FD G GF+ +LD+GG G+ S + +A++I ALD YF + + +I+EPGR
Sbjct: 245 RQVFDQGLERGFNFDLLDIGG---GFMNDSFDGVADLIRSALDTYF--DPSIRVISEPGR 299
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDH 475
++V+S+FTLA + +KR + MYY+NDGVYGS NCI++DH
Sbjct: 300 FFVSSSFTLAVNVIAKRKL-----DDEEKVMYYVNDGVYGSLNCILFDH 343
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 12 VWGPTCDGLDKVNDDILLP-EMPVGSWLIYRDMGAYTLPVASTFNGFPIPKV 62
+WGPTCD LD + +D LP E+ VG W+ + D GAYT+ AS FNGF ++
Sbjct: 372 IWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGFKTSRI 423
>sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1
Length = 460
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 182/302 (60%), Gaps = 33/302 (10%)
Query: 212 AFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKP----- 266
AF+V D+G IVRKH + LPRV P+YAVKCN S VL+VLA LG GF CA+K
Sbjct: 40 AFFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELV 99
Query: 267 ------------------ISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCD 308
I+ I+YAA++GI ++FDNE+EL KV + HP+A++V+ I D
Sbjct: 100 QHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATD 159
Query: 309 AEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQ 368
+ L +KFG + LL AK ++VVGVSFH+GSGC DP + ++I AR
Sbjct: 160 DSHSLSCLSLKFGVS-LKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218
Query: 369 IFDLGNSLGFSMRVLDLGGGYPGYTGYSM--NRIAEIINVALDEYFPVEEGVSIIAEPGR 426
+F++G LG M VLDLGGG+PG G + IA +IN ALD YFP GV I AE GR
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278
Query: 427 YYVASAFTLATLIHSKRDIL-------GANSSVPTHTMYYINDGVYGSFNCIIYDHAVCT 479
YYV SAFT+A I +K+++L N S +Y++++GVYG FN +++D+ T
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 338
Query: 480 PI 481
PI
Sbjct: 339 PI 340
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 4 RETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVH 63
+ L SS+WGP DG D V + + LP++ VG WL++ +MGAYT+ + S F G +
Sbjct: 348 EQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHIT 407
Query: 64 AVIEEHIWLMLKDRL 78
+ W L+ +L
Sbjct: 408 YAMSRVAWEALRRQL 422
>sp|Q8BVM4|ADC_MOUSE Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1
Length = 459
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 186/321 (57%), Gaps = 32/321 (9%)
Query: 191 TDDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVL 250
T D+ + K AF+V D+G +VRKH + LPRV P+YAV CN S VL
Sbjct: 19 TRDLLEELTLGASQATSGKVAAFFVADLGAVVRKHFCFLKHLPRVRPFYAVGCNSSLGVL 78
Query: 251 EVLAALGTGFDCASKP-----------------------ISHIRYAAEYGIDTMTFDNEI 287
+VLA LG GF CA+K ++ I+YAA++G+ ++FDNE+
Sbjct: 79 KVLAELGLGFSCANKAEMELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEV 138
Query: 288 ELQKVKQFHPTAQLVIRIRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSF 347
EL KV + HP+A++V+ I + L ++FG + LL AK ++VVGVSF
Sbjct: 139 ELAKVVKSHPSAKMVLCIATQDSHSLNHLSLRFGAS-LKSCRHLLENAKKSHVEVVGVSF 197
Query: 348 HVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSM--NRIAEIIN 405
H+GSGC DP + ++I AR +F +G LG +M +LDLGGG+PG G + +A +IN
Sbjct: 198 HIGSGCPDPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVIN 257
Query: 406 VALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIHSKRDILGANS------SVPTHTMYY 459
ALD YFP GV I+AE GRYYV SAFT+A I +KR++L S + P +YY
Sbjct: 258 SALDLYFPEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYY 317
Query: 460 INDGVYGSFNCIIYDHAVCTP 480
+++GVYG FN +++D+ TP
Sbjct: 318 LDEGVYGVFNSVLFDNTCPTP 338
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 7 LVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVI 66
L SS+WGP +G D V + + LP++ VG WL++ +MGAYT+ S G +V +
Sbjct: 350 LYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYTVDTKSLLGGTQARRVTYAM 409
Query: 67 EEHIWLMLKDR-LPLTQDH 84
W L+ + LP +D
Sbjct: 410 SRLAWEALRGQLLPAEEDQ 428
>sp|P41931|DCOR_CAEEL Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=3
SV=2
Length = 422
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 178/297 (59%), Gaps = 31/297 (10%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASK---- 265
+ +F ++D+ +I+ + + WK +LP ++P+YAVKCN +++ +LA+LG GFDCASK
Sbjct: 39 DSSFMLVDLDKIIERFQLWKRELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEID 98
Query: 266 -------------------PISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
S I +A + + MTFDN EL K+ + HP A++++RI
Sbjct: 99 IVMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRIA 158
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
A C L +KFG DPI AP+LL+ A ++VVG+SFHVGSGC D + A+ A
Sbjct: 159 VSDPTATCPLNLKFGADPIIAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQHA 218
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYS-MNRIAEIINVALDEYFPVEEGVSIIAEPG 425
+ + ++G LGF M ++D+GGG+PG ++ +IAE I ALDE+FP + +IAEPG
Sbjct: 219 KNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFP-DTNKRLIAEPG 277
Query: 426 RYYVASAFTL-ATLIHSKRDILGANSSVPTHT-----MYYINDGVYGSFNCIIYDHA 476
R++ A F+L A +IH+ + P MYYINDGVYGSFNCI++DHA
Sbjct: 278 RFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHA 334
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 10 SSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEEH 69
S++WGPTCD LD V D L+P+M VG WL Y DMGAYTL A+TFNGF P V+ E
Sbjct: 352 STIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGFSKPVPMYVMSEE 411
Query: 70 IWLMLKD 76
+W ++D
Sbjct: 412 MWESIRD 418
>sp|P08432|DCOR_YEAST Ornithine decarboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPE1 PE=1 SV=1
Length = 466
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 171/292 (58%), Gaps = 35/292 (11%)
Query: 209 KEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS---- 264
+E++F++ D+GE+ R +W +LPR+ P+YAVKCN VL +LA LG FDCAS
Sbjct: 83 EENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEI 142
Query: 265 -------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRI 305
K S IRYAA + TFDN EL K+K+FHP +QL++RI
Sbjct: 143 DRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRI 202
Query: 306 RCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYS 365
D AQC+L K+GC+ + LL+ K L L++ GVSFHVGSG D +A+
Sbjct: 203 ATDDSTAQCRLSTKYGCE-MENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRD 261
Query: 366 ARQIFD-LGNSLGF-SMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAE 423
AR +FD N G +++LD+GGG+ S ++ +AL+E+FPV GV IIAE
Sbjct: 262 ARTVFDKAANEYGLPPLKILDVGGGFQ---FESFKESTAVLRLALEEFFPVGCGVDIIAE 318
Query: 424 PGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDH 475
PGRY+VA+AFTLA+ + +KR + M Y NDGVYG+ NCI++DH
Sbjct: 319 PGRYFVATAFTLASHVIAKRKL------SENEAMIYTNDGVYGNMNCILFDH 364
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 1 YPYRETLVPSSVWGPTCDGLDKVNDDILLP-EMPVGSWLIYRDMGAYTLPVASTFNGF 57
YPY+ S+WGPTCDGLD + + + ++ VG W + +GAYT A+ FNGF
Sbjct: 400 YPYK-----VSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSSAATQFNGF 452
>sp|Q5R7K3|AZIN1_PONAB Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1
Length = 448
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 174/292 (59%), Gaps = 37/292 (12%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS----- 264
++AF+V D+G+IV+KH W+ + ++ P+Y VKCN + VLE+LAALGTGF C+S
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMA 96
Query: 265 ------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
K +S I+YAA+ G++ MT DNEIEL+K+ + HP A++++ I
Sbjct: 97 LVQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+ + + MKFG + LL AK LD+ ++GV FHV S C + V+ A+ A
Sbjct: 157 TEDNIGGEEGNMKFGT-TLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
R +FD+ +GF+M +LD+GGG+ G T + + + +I+ LD YFP GV II+EPG
Sbjct: 216 RCVFDMAGEIGFTMNMLDIGGGFTG-TEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGS 274
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHT----------MYYINDGVYGSF 468
YYV+SAFTLA I +K+ + N P+ MYY+NDGVYGSF
Sbjct: 275 YYVSSAFTLAVNIIAKKVV--ENDKFPSGVEKTGSDEPAFMYYMNDGVYGSF 324
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIP 60
Y E L SS+WGP+CD LD++ + LLPE+ VG WLI+ +MGA + S FN F P
Sbjct: 342 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 401
Query: 61 KVHAVIEEHIWLMLKDRLPLTQDHFIK 87
++ ++ W ++D +T D +K
Sbjct: 402 AIYYMMSFSDWYEMQDA-GITSDSMMK 427
>sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2
Length = 448
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 174/292 (59%), Gaps = 37/292 (12%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS----- 264
++AF+V D+G+IV+KH W+ + ++ P+Y VKCN + VLE+LAALGTGF C+S
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMA 96
Query: 265 ------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
K +S I+YAA+ G++ +T DNEIEL+K+ + HP A++++ I
Sbjct: 97 LVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+ + + MKFG + LL AK LD+ ++GV FHV S C + V+ A+ A
Sbjct: 157 TEDNIGGEEGNMKFGT-TLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
R +FD+ +GF+M +LD+GGG+ G T + + + +I+ LD YFP GV II+EPG
Sbjct: 216 RCVFDMAGEIGFTMNMLDIGGGFTG-TEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGS 274
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHT----------MYYINDGVYGSF 468
YYV+SAFTLA I +K+ + N P+ MYY+NDGVYGSF
Sbjct: 275 YYVSSAFTLAVNIIAKKVV--ENDKFPSGVEKTGSDEPAFMYYMNDGVYGSF 324
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIP 60
Y E L SS+WGP+CD LD++ + LLPE+ VG WLI+ +MGA + S FN F P
Sbjct: 342 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 401
Query: 61 KVHAVIEEHIWLMLKDRLPLTQDHFIK 87
++ ++ W ++D +T D +K
Sbjct: 402 AIYYMMSFSDWYEMQDA-GITSDSMMK 427
>sp|P78599|DCOR_CANAL Ornithine decarboxylase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SPE1 PE=3 SV=1
Length = 473
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 38/315 (12%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASK---- 265
ED+F+V D+GEI+ W+ LP V PYYAVKCN + +L L+ LG FDCASK
Sbjct: 74 EDSFFVCDLGEIINSVNQWQQILPMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEID 133
Query: 266 ---------------------PISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIR 304
S IR+AA+ ++ T DN EL K+ +FHP +++IR
Sbjct: 134 LVLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILIR 193
Query: 305 IRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIY 364
+ D AQCQL KFGCD + +L AK L L V GV+FHVGSG D +AI
Sbjct: 194 LITDDSTAQCQLSTKFGCDLNTAIGEILPKAKELGLQVHGVAFHVGSGAKDFSSIYQAIK 253
Query: 365 SARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVE----EGVSI 420
+R +FD S+GF+ ++LD+GGG+ T + ++++ AL+++FP+E +
Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERET---FPQSSQMVKFALEKFFPIEFSQSNEIKF 310
Query: 421 IAEPGRYYVASAFTLATLIHSKRDI-LGANSSVPTHT---MYYINDGVYGSFNCIIYDHA 476
IAEPGR+ VA+AFTL T I ++RD+ G N++ T M YINDGVYG+ NCI++DH
Sbjct: 311 IAEPGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNCILFDHQ 370
Query: 477 VCTPIPFNVMDDSQV 491
TP + + +++Q+
Sbjct: 371 --TPKVYVLTNENQL 383
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 11 SVWGPTCDGLDKVNDDILLPE-MPVGSWLIYRDMGAYTLPVASTFNGF 57
S+WGPTCDGLD V+ L + + VG WL + ++GAYT ++ FNG
Sbjct: 411 SIWGPTCDGLDCVSSLAKLSKNVQVGDWLFFENVGAYTSCASTKFNGL 458
>sp|O35484|AZIN1_MOUSE Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1
Length = 448
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 171/290 (58%), Gaps = 33/290 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS----- 264
++AF+V D+G+IV+KH W+ + ++ P+Y VKCN + VLE+LAALGTGF C+S
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMA 96
Query: 265 ------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
K +S I+YAA+ G++ MT DNEIEL+K+ + HP A++++ I
Sbjct: 97 LVQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+ + MKFG + LL AK LD+ ++GV FHV S C + V+ A+ A
Sbjct: 157 TEDNIGGEDGNMKFGT-TLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
R +FD+ GF+M +LD+GGG+ G T + + +I+ LD YFP G+ II+EPG
Sbjct: 216 RCVFDMAGEFGFTMNMLDIGGGFTG-TEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGS 274
Query: 427 YYVASAFTLATLIHSKRDI--------LGANSSVPTHTMYYINDGVYGSF 468
YYV+SAFTLA I +K+ + + N S +YY+NDGVYGSF
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSF 324
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIP 60
Y E L SS+WGP+CD LD++ + LLPE+ VG WLI+ +MGA + S FN F P
Sbjct: 342 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 401
Query: 61 KVHAVIEEHIWLMLKDRLPLTQDHFIK 87
++ ++ W ++D +T D +K
Sbjct: 402 AIYFMMSFSDWYEMQDA-GITSDAMMK 427
>sp|Q63764|AZIN1_RAT Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1
Length = 448
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 171/290 (58%), Gaps = 33/290 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS----- 264
++AF+V D+G+IV+KH W+ + ++ P+Y VKCN + VLE+LAALGTGF C++
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYMVKCNSTPAVLEILAALGTGFACSTKNEMA 96
Query: 265 ------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
K S I+YAA+ G++ MT DNE+EL+K+ + HP A++++ I
Sbjct: 97 LVQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA 156
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+ + MKFG + LL AK LD+ ++GV FH+ S C + V+ A+ A
Sbjct: 157 TEDNIGGEDGNMKFGT-TLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDA 215
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
R +FD+ GF+M +LD+GGG+ G T + + +I+ LD YFP G+ II+EPG
Sbjct: 216 RCVFDMAGEFGFTMNMLDIGGGFTG-TEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGS 274
Query: 427 YYVASAFTLATLIHSKR----DILGA----NSSVPTHTMYYINDGVYGSF 468
YYV+SAFTLA I +K+ D L + N S +YY+NDGVYGSF
Sbjct: 275 YYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSF 324
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 YPYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIP 60
Y E L SS+WGP+CD LD++ + LLPE+ VG WLI+ +MGA +L S F+ P
Sbjct: 342 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSLHGPSAFSDTQRP 401
Query: 61 KVHAVIEEHIWLMLKDRLPLTQDHFIK 87
++ ++ W ++D +T D +K
Sbjct: 402 AIYFMMSLSDWYEMQDA-GITSDAMMK 427
>sp|P40808|DCOR2_DROME Ornithine decarboxylase 2 OS=Drosophila melanogaster GN=Odc2 PE=1
SV=2
Length = 393
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 174/287 (60%), Gaps = 25/287 (8%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASK---- 265
+ A + D+ + RK W +PR++P+YAVKCND +V++ LA LGTGFDCASK
Sbjct: 30 DQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELK 89
Query: 266 -------------------PISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
P SH+RYA E + T DNE E+ K+++ +P + L++R +
Sbjct: 90 LVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFK 149
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
+A+ A C LG K+GCD ++A L+ LAK+L L V G SFHVGSGC + + RAI A
Sbjct: 150 SEAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKA 209
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
IF +G +G M +LD+GGG+PG IA+ +N +++ FP ++ + II+EPGR
Sbjct: 210 ENIFKVGEMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFP-DKRIRIISEPGR 268
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIY 473
++V +A+TL +H+KR++ + + T MYY+NDG++G+F + Y
Sbjct: 269 FFVEAAYTLICKVHAKREVRSKDGKLDT-MMYYLNDGIFGAFAGMFY 314
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 8 VPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVH 63
+ S +WGP+CD +DK++D +LLP + G L +R+MGAYT+P+AS FNGF +P+
Sbjct: 334 LKSVIWGPSCDAMDKISD-LLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPETR 388
>sp|P50134|DCOR_DATST Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1
Length = 431
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 175/305 (57%), Gaps = 35/305 (11%)
Query: 209 KEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS---- 264
++ FYVLD+GE+V + W LP + P+YAVKCN L +L+A+G+ FDCAS
Sbjct: 61 EKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEI 120
Query: 265 -------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRI 305
KP S I +AA+ G++ TFD+E E+ K+++ HP +L++RI
Sbjct: 121 EYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRI 180
Query: 306 R-CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIY 364
+ D A+C +G K+G P E LLR A++ L V GVSFH+GSG D + AI
Sbjct: 181 KPMDDGNARCPMGPKYGALP-EEVEPLLRTAQAARLTVSGVSFHIGSGDADSKAYLGAIA 239
Query: 365 SARQIFDLGNSLGFS-MRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAE 423
+A+ +F+ G S M VLD+GGG+ +G+ + + AL+++F E+ ++IIAE
Sbjct: 240 AAKGVFETAARFGMSKMTVLDIGGGF--TSGHQFTTASAAVRSALEQHFHDEQELTIIAE 297
Query: 424 PGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPF 483
PGR++ +AFTLAT I KR + G Y+INDG+YGS NC++YDHA P
Sbjct: 298 PGRFFAETAFTLATTIIGKR-VRGELRE------YWINDGLYGSMNCVLYDHATVNATPL 350
Query: 484 NVMDD 488
M +
Sbjct: 351 ACMSN 355
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGF 57
PS+V+GPTCD LD V D LPE+ V WLI+ +MGAYT S FNGF
Sbjct: 368 PSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGF 416
>sp|Q8S3N2|DCOR_CAPAN Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1
Length = 435
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 187/330 (56%), Gaps = 39/330 (11%)
Query: 209 KEDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS---- 264
++ FYVLD+GE+V + W + LP V P+YAVKCN L +LAA+G+ F CAS
Sbjct: 65 EKKPFYVLDLGEVVSLMDQWNVALPNVRPFYAVKCNPEPSFLSMLAAMGSNFVCASRAEI 124
Query: 265 -------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRI 305
KP S I +A + G++ T+D+E E+ K+K+ HP +L++RI
Sbjct: 125 EYVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRI 184
Query: 306 R-CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIY 364
+ + A+C +G K+G P E LLR+A++ L V GVSFH+GSG D + AI
Sbjct: 185 KPMNDGNARCPMGPKYGALP-EEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIA 243
Query: 365 SARQIFDLGNSLGFS-MRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAE 423
+A+Q+F+ G S M VLD+GGG+ +G+ A + AL ++F E ++IIAE
Sbjct: 244 AAKQVFETAAKFGMSKMNVLDIGGGF--TSGHQFTTAATAVKSALQQHFSNEPELTIIAE 301
Query: 424 PGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPF 483
PGR++ +AFTLAT I KR + G Y+INDG+YGS NC++YDHA T P
Sbjct: 302 PGRFFAETAFTLATTIIGKR-VRG------DLREYWINDGLYGSMNCVLYDHATVTATPL 354
Query: 484 NVMDDSQVSLR---SPLFLQESFLLSCLSL 510
M + +V+L S +F F +C +L
Sbjct: 355 ACMSN-RVNLNCSGSKMFPSTIFGPTCDAL 383
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 7 LVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGF 57
+ PS+++GPTCD LD V D +PE+ V W+I+ +MGAYT S FNGF
Sbjct: 370 MFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAGSNFNGF 420
>sp|Q54UF3|DCOR_DICDI Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc
PE=3 SV=1
Length = 461
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 163/303 (53%), Gaps = 34/303 (11%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS----- 264
DAF+V DVG I+++ + W LP V PYYAVKCN + VL VL ALGT +DCAS
Sbjct: 84 RDAFFVADVGVIIKQWQKWVKNLPNVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIE 143
Query: 265 ------------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR 306
K IS +++A + + MTFDN EL+K+++F P A+LV+RI
Sbjct: 144 SVLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRIA 203
Query: 307 CDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSA 366
D + + G KFG I + LL +AK ++L VVGVSFHVGSGC + A+
Sbjct: 204 PDDSKSVMRFGSKFGVH-IDDCNDLLEMAKEMNLKVVGVSFHVGSGCQSGDSYADALIMV 262
Query: 367 RQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
+ +FD+ L + ++D+GGG+ G N ++I E F V IIAEPGR
Sbjct: 263 KSVFDMAKKLNMELTLVDVGGGFTGSDDEKFNAFTKVIREKTAELF--SPNVKIIAEPGR 320
Query: 427 YYVASAFTLATLIHSKRDILGA-NSSVPTHTM-------YYINDGVYGSFNCIIYDHAVC 478
Y+ A + TLA + SKR I N P T YY+ DGVYGSFN +D+A
Sbjct: 321 YFAAQSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNTKFDYAKV 380
Query: 479 TPI 481
P+
Sbjct: 381 EPL 383
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 2 PYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPK 61
P + P +++GPTCD +D V D +PE+ +G WL ++DMGAYT+ +S+FNGF P
Sbjct: 387 PSTKQPTPCTLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGFCPPP 446
Query: 62 VH 63
V+
Sbjct: 447 VY 448
>sp|O22616|DCOR_SOLLC Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2
Length = 431
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 171/302 (56%), Gaps = 37/302 (12%)
Query: 213 FYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS-------- 264
FYVLD+GE+V E W LP + P+YAVKCN L +L+A+G+ FDCAS
Sbjct: 65 FYVLDLGEVVSLMEQWNSALPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIEYVL 124
Query: 265 ---------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR--C 307
KP S I +A + G++ T+D+E E+ K+++ HP +L++RI+
Sbjct: 125 SHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIKPMT 184
Query: 308 DAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSAR 367
D A+C +G K+G P E LLR A++ L V GVSFH+GSG D + AI +A+
Sbjct: 185 DGN-ARCPMGPKYGALP-EEIEPLLRTAQAARLTVSGVSFHIGSGDADSNAYLGAIAAAK 242
Query: 368 QIFDLGNSLGF-SMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGR 426
Q+F+ LG M VLD+GGG+ +G+ A + AL+ +F ++IIAEPGR
Sbjct: 243 QVFETAAQLGMPKMTVLDIGGGF--TSGHQFTTAAPAVKSALETHFHDFPELTIIAEPGR 300
Query: 427 YYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDHAVCTPIPFNVM 486
++ +AFTLAT I KR + G Y+INDG+YGS NC++YDHA T P M
Sbjct: 301 FFAETAFTLATTIIGKR-VRGELKE------YWINDGLYGSMNCVLYDHATVTATPLACM 353
Query: 487 DD 488
+
Sbjct: 354 SN 355
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGF 57
PS+V+GPTCD LD V D LPE+ V WLI+ +MGAYT S FNGF
Sbjct: 368 PSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGF 416
>sp|P27116|DCOR_LEIDO Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1
Length = 707
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 166/324 (51%), Gaps = 46/324 (14%)
Query: 210 EDAFYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKPISH 269
ED FY++D+G +V + W+ +LP V PY+AVK N VLEVL+ALG GFDCASK H
Sbjct: 256 EDPFYIIDLGRVVEQMARWRHELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315
Query: 270 -------------------------IRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIR 304
+R A G+ +T DN +E++K+ + P+A +IR
Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375
Query: 305 IRCDAEVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIY 364
I+ + AQC KFG P+ + LL A+ ++ V GVSFHVGSG D + A+
Sbjct: 376 IKTNDSKAQCSFSTKFGA-PLEDVEGLLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAVR 434
Query: 365 SARQIFDLGNSLGFSMRVLDLGGGYPGYT------GYSMNRIAEIINVALDEYFPVEEGV 418
A Q+F GF +LD+GGG+PG S IA I L E F + V
Sbjct: 435 DAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGD-V 493
Query: 419 SIIAEPGRYYVASAFTLATLIHSKRDILGANSSV-------------PTHTMYYINDGVY 465
+II+EPGRY+ A++ L + + R + ++ V P YY+NDG+Y
Sbjct: 494 TIISEPGRYFTAASHALLMNVFASRTLRLSDVEVSRQAFQSVVSMDEPEEYQYYVNDGLY 553
Query: 466 GSFNCIIYDHAVCTPIPFNVMDDS 489
SFNCI++DHA T + N D +
Sbjct: 554 HSFNCILFDHAHPTLLLLNDGDGA 577
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 4 RETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVH 63
R L ++++GPTCD +D + PEM +G WL+ DMG+YT A FNGF ++
Sbjct: 621 RRPLRITTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGFATRRLE 680
Query: 64 AV 65
V
Sbjct: 681 WV 682
>sp|O50657|DCLO_SELRU Lysine/ornithine decarboxylase OS=Selenomonas ruminantium GN=ldc
PE=1 SV=1
Length = 393
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 137/290 (47%), Gaps = 38/290 (13%)
Query: 213 FYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS-------- 264
F V + ++ ++ + LPR +YA+K N + +L +LA LG+ FD AS
Sbjct: 22 FLVASLDKVEENYQFMRRHLPRAGVFYAMKANPTPEILSLLAGLGSHFDVASAGEMEILH 81
Query: 265 ---------------KPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCDA 309
K ++ AA+Y + TFD+ E+ K+ + P A +++RI
Sbjct: 82 ELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRIAVRN 141
Query: 310 EVAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQI 369
A L KFG P+ EA LL+ A+ L +G+ FHVGS + A+ AR++
Sbjct: 142 NKALVDLNTKFGA-PVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALLVARRL 200
Query: 370 FDLGNSLGFSMRVLDLGGGYPGYTGYSMN----RIAEIINVALDEYFPVEEGVSIIAEPG 425
FD +G + LD+GGG+P +N + E IN +D FP ++ EPG
Sbjct: 201 FDEAEEMGMHLTDLDIGGGFPVPDAKGLNVDLAAMMEAINKQIDRLFP---DTAVWTEPG 257
Query: 426 RYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCIIYDH 475
RY +A L T ++G + Y +++G+YG F+ I+YDH
Sbjct: 258 RYMCGTAVNLVT------SVIGTKTR-GEQPWYILDEGIYGCFSGIMYDH 300
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGF 57
PS+ GP+CDG+D + D + PE+ +G ++ +MG+YT A+ FNGF
Sbjct: 315 PSTFGGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGF 363
>sp|Q92445|DCOR_PARBR Ornithine decarboxylase (Fragment) OS=Paracoccidioides brasiliensis
GN=ODC PE=3 SV=1
Length = 79
Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 344 GVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEI 403
GVSFHVGSG DP F +A+ +R +FD +GF ++VLD+GGG+ T R A
Sbjct: 1 GVSFHVGSGAEDPKSFVKAVEDSRFVFDQAAEVGFDLKVLDVGGGFSEDT---FERFAAT 57
Query: 404 INVALDEYFPVEEGVSIIAEPGR 426
++ ALDEYFP + IIAEPGR
Sbjct: 58 LSDALDEYFPPH--IRIIAEPGR 78
>sp|Q9PII5|DCDA_CAMJE Diaminopimelate decarboxylase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=lysA PE=3 SV=1
Length = 402
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 59/267 (22%)
Query: 213 FYVLDVGEIVRKHEDWK--LKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCAS------ 264
FY+ + I + + K K + +YAVK N + +L++LA L +GFDC S
Sbjct: 14 FYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEVKR 73
Query: 265 -----------------KPISHIRYAAEYGIDTMTFDNEIELQKV----KQFHPTAQLVI 303
K +R A EY I + ++E E+ + K+ + A++ I
Sbjct: 74 ALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARISI 133
Query: 304 RIRCDAEVAQ---CQLGM---KFGCDPISEAPRLLRLAKSLD-LDVVGVSFHVGSGCGD- 355
R+ + + G+ KFG + I A ++ AK+ L+ VGV FH+GS D
Sbjct: 134 RVNPNVDAKTHPYISTGLNENKFGVE-IDIARKMYLYAKNSSFLEPVGVHFHIGSQLLDI 192
Query: 356 PPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGY----------PGYTGYSMNRIAEIIN 405
P+ A A+ + +L +L ++ D+GGG P Y+ +A++
Sbjct: 193 SPIHEAAAIVAKLVREL-KALQIDLKFFDIGGGLGVAYEKNECEPDLYDYAQGILAQLHG 251
Query: 406 VALDEYFPVEEGVSIIAEPGRYYVASA 432
+ L +I EPGRY VA +
Sbjct: 252 LDL----------TIGMEPGRYLVAKS 268
>sp|Q9KVL7|DCDA_VIBCH Diaminopimelate decarboxylase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=lysA PE=1
SV=1
Length = 417
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 239 YAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAE 275
YAVK N + VL LA LG+GFD S K + ++ A +
Sbjct: 58 YAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQ 117
Query: 276 YGIDTMTFDNEIELQKVK----QFHPTAQLVIRIRCDAEVAQ---CQLGM---KFGCDPI 325
I ++E ELQ++ + A + +RI D + G+ KFG
Sbjct: 118 LKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGI-TF 176
Query: 326 SEAPRLLRLAKSL-DLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLD 384
A ++ RLA SL +LDV G+ H+GS F A + D + G +R LD
Sbjct: 177 DRAAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLD 236
Query: 385 LGGGYP-GYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIH 440
+GGG Y + +E LD + +I EPGR A+A L T +
Sbjct: 237 VGGGLGVVYRDELPPQPSEYAKALLDR-LERHRDLELIFEPGRAIAANAGVLVTKVE 292
>sp|Q9ZME5|DCDA_HELPJ Diaminopimelate decarboxylase OS=Helicobacter pylori (strain J99)
GN=lysA PE=3 SV=1
Length = 405
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 199 VYNYPDNVGMKEDAFYVLDVGEIVRKHEDWK--LKLPRVDPYYAVKCNDSQMVLEVLAAL 256
++NY + + FY+ D +I + ++K K + YA+K N + +L +LA L
Sbjct: 1 MFNYEELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANL 60
Query: 257 GTGFDCAS-----------------------KPISHIRYAAEYGIDTMTFDNEIELQKVK 293
G+G DC S K I A + I + ++ +EL+ ++
Sbjct: 61 GSGADCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIE 120
Query: 294 QFHPT----AQLVIRIR--CDAE----VAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVV 343
+ A++ IRI DA+ ++ KFG + L KS L+ V
Sbjct: 121 TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPV 180
Query: 344 GVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYP-GYTGYSMNRIAE 402
V FH+GS D A +I +LG +R D+GGG Y ++ +
Sbjct: 181 SVHFHIGSQLLDLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD 240
Query: 403 IINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLI 439
L+ ++ ++II EPGR VA + L T +
Sbjct: 241 YAQGILNSLQGLD--LTIICEPGRSIVAESGELITQV 275
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEE 68
P V GP C+ D D LPE+ G L +GAY +AS +N P + +E+
Sbjct: 321 PCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRP-KLLELALED 379
Query: 69 HIWLMLKDRLPL 80
H +++ R L
Sbjct: 380 HKIRVIRKREAL 391
>sp|P19572|DCDA_PSEAE Diaminopimelate decarboxylase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=lysA
PE=3 SV=2
Length = 415
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 56/246 (22%)
Query: 239 YAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAE 275
+AVK N + VL VLA LG GFD S K +R A E
Sbjct: 57 FAVKANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALE 116
Query: 276 YGIDTMTFDNEIELQKVKQFHPTAQLVIR----IRCDAEV-AQCQ----LGM---KFGCD 323
G+ ++ EL+++++ A+L ++ +R + +V AQ G+ KFG
Sbjct: 117 VGVHCFNVESGEELERLQRV--AAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGI- 173
Query: 324 PISEAPRLLRLAKSLD-LDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRV 382
I EA + A LD L+V+GV H+GS F A+ + D G +R
Sbjct: 174 AIDEAEAVYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRH 233
Query: 383 LDLGGGY--------PGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFT 434
LDLGGG P G + I E ++ ++++ EPGR VA+A
Sbjct: 234 LDLGGGLGVRYRDEQPPLAGDYIRAIRERLH---------GRDLTLVFEPGRSIVANAGV 284
Query: 435 LATLIH 440
L T +
Sbjct: 285 LLTRVE 290
>sp|O27390|DCDA_METTH Diaminopimelate decarboxylase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=lysA PE=3 SV=1
Length = 428
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 114/294 (38%), Gaps = 52/294 (17%)
Query: 223 RKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALGTGFDCASKPI--------------- 267
R + + + R +YA K N + V+ +L G+G D S
Sbjct: 45 RLYRAFSGEYSRFQVFYACKANTNLAVMRILEEEGSGIDAVSPGEIYTALMAGFDPDRIL 104
Query: 268 --------SHIRYAAEYGIDTMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVA-----QC 314
+++A + G+ + D+ +L ++ + P L I R + V C
Sbjct: 105 YTGNNVRDDELQFALDSGV-RINVDSRSQLLRLSEIAPEG-LRISFRVNPLVGAGHHEHC 162
Query: 315 QLG---MKFGCDPISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFD 371
G KFG EAP + R+A L + VG+ H+GSG DP F A+ + I
Sbjct: 163 ITGGEMSKFGVME-REAPEVYRMAMDLGFEPVGIHAHIGSGILDPEPFMLAVETLMDIAG 221
Query: 372 -LGNSLGFSMRVLDLGGGY---------PGYTGYSMNRIAEIINVALDEYFPVEEGVS-- 419
+ + G +D GGG P ++I + L EY G+
Sbjct: 222 RVHEATGVEFEFIDFGGGLGIPYTPEEEPLDIDEFASKITGLFKDKLSEY-----GLGRP 276
Query: 420 -IIAEPGRYYVASAFTLATLIHSKRDILGANSSVPTHTMYYINDGVYGSFNCII 472
+ EPGRY V A L T +++ ++ + V + +YGS++ I+
Sbjct: 277 MMCLEPGRYIVGDASYLLTRVNTIKESYRKFAGVDAGFNTLLRPAMYGSYHHIL 330
>sp|O67262|DCDA_AQUAE Diaminopimelate decarboxylase OS=Aquifex aeolicus (strain VF5)
GN=lysA PE=1 SV=1
Length = 420
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 204 DNVGMKEDA------FYVLDVGEIVRKHEDWKLKLPRVDPYYAVKCNDSQMVLEVLAALG 257
+ V +KE A YV I + E ++ P YAVK N + ++++L LG
Sbjct: 21 EGVSLKELAQTFGTPLYVYSSNFIKERFEAYRKAFPDALICYAVKANFNPHLVKLLGELG 80
Query: 258 TGFDCASK-----------PISHIRYAAEYGID---TMTFDNEIELQKVK---------- 293
G D S P I YA + T D+EI + V+
Sbjct: 81 AGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNE 140
Query: 294 ---QFHPTAQLVIRIRCDAE------VAQCQLGMKFGCDPISEAPRLLRLAKSLD-LDVV 343
+ A++ IR+ D + +A KFG D I EA + A L+ L++V
Sbjct: 141 IAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVD-IREAQKEYEYASKLENLEIV 199
Query: 344 GVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGG 388
G+ H+GS D + A+ +++ GF ++ LD+GGG
Sbjct: 200 GIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGG 244
>sp|B4XMC6|DCDA_HELPX Diaminopimelate decarboxylase OS=Helicobacter pylori GN=lysA PE=1
SV=1
Length = 405
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 111/280 (39%), Gaps = 44/280 (15%)
Query: 199 VYNYPDNVGMKEDAFYVLDVGEIVRKHEDWK--LKLPRVDPYYAVKCNDSQMVLEVLAAL 256
++NY + + FY+ D +I + ++K K + YA+K N + +L +LA L
Sbjct: 1 MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL 60
Query: 257 GTGFDCAS-----------------------KPISHIRYAAEYGIDTMTFDNEIELQKVK 293
+G DC S K I A + I + ++ +EL+ ++
Sbjct: 61 ESGADCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIE 120
Query: 294 QFHPT----AQLVIRIR--CDAE----VAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVV 343
+ A++ IRI DA+ ++ KFG L KS L+ V
Sbjct: 121 TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV 180
Query: 344 GVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGG----YPGYTGYSMNR 399
V FH+GS D A +I +LG +R D+GGG Y +
Sbjct: 181 SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD 240
Query: 400 IAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLI 439
A+ I AL ++II EPGR VA + L T +
Sbjct: 241 YAQGILNALQGL-----DLTIICEPGRSIVAESGELITQV 275
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEE 68
P V GP C+ D D LPE+ G + +GAY +AS +N P + +E+
Sbjct: 321 PCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRP-KLLELALED 379
Query: 69 HIWLMLKDRLPL 80
H +++ R L
Sbjct: 380 HKIRVIRKREAL 391
>sp|P56129|DCDA_HELPY Diaminopimelate decarboxylase OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=lysA PE=3 SV=1
Length = 405
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 38/277 (13%)
Query: 199 VYNYPDNVGMKEDAFYVLDVGEIVRKHEDWK--LKLPRVDPYYAVKCNDSQMVLEVLAAL 256
++NY + + FY+ D +I + ++K K + YA+K N + +L +LA L
Sbjct: 1 MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL 60
Query: 257 GTGFDCAS------------KPIS-----------HIRYAAEYGIDTMTFDNEIELQKVK 293
+G DC S KP I A + I + ++ +EL ++
Sbjct: 61 ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIE 120
Query: 294 QFHPT----AQLVIRIR--CDAE----VAQCQLGMKFGCDPISEAPRLLRLAKSLDLDVV 343
+ A++ IRI DA+ ++ KFG L KS L+ V
Sbjct: 121 TIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV 180
Query: 344 GVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYP-GYTGYSMNRIAE 402
V FH+GS D A +I +LG +R D+GGG Y ++ +
Sbjct: 181 SVHFHIGSQLSDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD 240
Query: 403 IINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLI 439
L+ ++ ++II EPGR VA + L T +
Sbjct: 241 YAQGILNSLQGLD--LTIICEPGRSIVAESGELITQV 275
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 9 PSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGFPIPKVHAVIEE 68
P V GP C+ D D LPE+ G L+ +GAY +AS +N P + +E+
Sbjct: 321 PCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYNSRP-KLLELALED 379
Query: 69 HIWLMLKDRLPL 80
H +++ R L
Sbjct: 380 HKIRVIRKREAL 391
>sp|Q9RTK2|DCDA_DEIRA Diaminopimelate decarboxylase OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=lysA PE=3 SV=1
Length = 379
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 238 YYAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAA 274
+YA+K N + +L AA G GF+C S K + AA
Sbjct: 44 FYAMKANPNLNLLRRYAAAGVGFECVSLGELLRAEAAGAGGERMILNGPAKSDAEYAAAA 103
Query: 275 EYGIDTMTFDNEIELQKVKQFHPTAQLVIRIR------CDAEVAQCQLGMKFGCDPISEA 328
G T+ D E ++V P +++++R+ +A KFG P +
Sbjct: 104 RLGA-TIVVDRE---EEVVLLPPGSRVLVRVNPAMTVSTHEHLATGTARSKFGLTP-EQV 158
Query: 329 PRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGG 388
P L + +V+G+ H+GS F A ++ +L +G + VL++GG
Sbjct: 159 PGTLAELRDAGHEVLGLHMHIGSAIEQAEDFTAAFA---RVTELRAHIG-GLSVLNVGG- 213
Query: 389 YPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASA-FTLATLIHSKR 443
G+S+N E I E V G + EPGRY VASA + L ++ +KR
Sbjct: 214 -----GWSLNADLEGIAYEAHEAARV-FGAELWVEPGRYLVASAGWLLTRVVGTKR 263
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 1 YPYRETLVPSSVW---GPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFNGF 57
YP + L + VW GP C+ D + + LP G L+ + GAY ++ST+
Sbjct: 291 YPMWDALA-TEVWDVAGPACESGDLIARGVPLPTPQRGHLLLIGEAGAYGASMSSTYLSR 349
Query: 58 PIPKVHAVIEEHIWLMLKDR 77
P P + H W +L+ R
Sbjct: 350 PRP-AEVLWTGHDWQLLRRR 368
>sp|Q9Z661|DCDA_ZYMMO Diaminopimelate decarboxylase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=lysA PE=3 SV=1
Length = 421
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 33/183 (18%)
Query: 239 YAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAE 275
+AVK N SQ +L A G G D S K +RYA E
Sbjct: 60 FAVKANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALE 119
Query: 276 YGIDTMTFDN--EIEL--QKVKQFHPTAQLVIRIRCD------AEVAQCQLGMKFGCDPI 325
GI ++ EIE+ + A + +RI D A++A + KFG
Sbjct: 120 IGIGQFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAE 179
Query: 326 SEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDL 385
+LA L + G++ H+GS D F A +I G ++ DL
Sbjct: 180 DALSAYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADL 239
Query: 386 GGG 388
GGG
Sbjct: 240 GGG 242
>sp|C6E3V4|SPEA_GEOSM Biosynthetic arginine decarboxylase OS=Geobacter sp. (strain M21)
GN=speA PE=3 SV=1
Length = 635
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 62/273 (22%)
Query: 233 PRVDPYYAVKCNDSQMVLEVLAALGT----GFDCASKP---------------------- 266
+ +Y +K N + V+E +A G G + SKP
Sbjct: 91 AKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYK 150
Query: 267 ----ISHIRYAAEYGID-TMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVAQCQLG---- 317
I + +A G D T+ + EL+K+ + +V ++ +++ +G
Sbjct: 151 DTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWST 210
Query: 318 -----MKFGCDPISEAPRLLRLAKSLD-LDVVGV-SFHVGSGCGDPPVFGRAIYSARQIF 370
KFG ISE + + K D LD V + FHVGS A+ +I+
Sbjct: 211 SGGDDAKFGL-RISELIAAIEMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIY 269
Query: 371 DLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEY-----FPVEE-----GV-- 418
LG ++ LD+GGG S + +N +L+EY + V+ GV
Sbjct: 270 AEMRKLGVNLEFLDIGGGLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPC 329
Query: 419 -SIIAEPGRYYVASAFTLATLIHSKRDILGANS 450
+II+E GR VA L T D+L N+
Sbjct: 330 PNIISESGRATVAHYSVLVT------DVLNNNT 356
>sp|B5EIW4|SPEA_GEOBB Biosynthetic arginine decarboxylase OS=Geobacter bemidjiensis
(strain Bem / ATCC BAA-1014 / DSM 16622) GN=speA PE=3
SV=1
Length = 635
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 62/272 (22%)
Query: 234 RVDPYYAVKCNDSQMVLEVLAALGT----GFDCASKP----------------------- 266
+ +Y +K N + V+E +A G G + SKP
Sbjct: 92 KYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYKD 151
Query: 267 ---ISHIRYAAEYGID-TMTFDNEIELQKVKQFHPTAQLVIRIRCDAEVAQCQLG----- 317
I + +A G D T+ + EL+K+ + +V ++ +++ +G
Sbjct: 152 TEFIETVLFATRVGYDITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWSTS 211
Query: 318 ----MKFGCDPISEAPRLLRLAKSLD-LDVVGV-SFHVGSGCGDPPVFGRAIYSARQIFD 371
KFG ISE + + K D LD V + FHVGS A+ +I+
Sbjct: 212 GGDDAKFGL-RISELIAAIDMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIYA 270
Query: 372 LGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEY-----FPVEE-----GV--- 418
LG ++ LD+GGG S + +N +L+EY + V+ GV
Sbjct: 271 EMRKLGVNLEFLDIGGGLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPCP 330
Query: 419 SIIAEPGRYYVASAFTLATLIHSKRDILGANS 450
+II+E GR VA L T D+L N+
Sbjct: 331 NIISESGRATVAHYSVLVT------DVLNNNT 356
>sp|O05321|DCDA_PSEFL Diaminopimelate decarboxylase OS=Pseudomonas fluorescens GN=lysA
PE=3 SV=1
Length = 416
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 239 YAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAE 275
+AVK N + VL VLA LG GFD S K +R A E
Sbjct: 57 FAVKANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALE 116
Query: 276 YGIDTMTFDNEIELQK-----VKQFHPTAQLVIRIRCDAEVAQ---CQLGMK---FGCDP 324
G+ ++ EL + A + +R+ D + G+K FG
Sbjct: 117 VGVHCFNIESTDELGSRLQIVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAI 176
Query: 325 ISEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLD 384
+R A+ +L+V+GV H+GS F A+ + D G +R +D
Sbjct: 177 ADAEDVYVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHID 236
Query: 385 LGGGYP-GYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIH 440
LGGG Y +A+ I A+ E + ++++ EPGRY VA+A L T +
Sbjct: 237 LGGGVGVRYRDEEPPLVADYIK-AVRERLDGRD-LALMFEPGRYIVANAGVLLTQVE 291
>sp|Q58497|DCDA_METJA Diaminopimelate decarboxylase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=lysA PE=1 SV=1
Length = 438
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 46/249 (18%)
Query: 239 YAVKCNDSQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAE 275
YA K N + + +LA LG G D S K I E
Sbjct: 70 YAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIE 129
Query: 276 YGIDTMTFDNEIEL----QKVKQFHPTAQLVIRI------RCDAEVAQCQLGMKFGCDPI 325
I D+ EL + K+ TA + RI + +++ KFG D
Sbjct: 130 ANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVE 189
Query: 326 SE-APRLLRLAKSLD-LDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSL---GFSM 380
S A + +++A ++ ++VVGV H+GS D F I R++ D L G +
Sbjct: 190 SGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPF---IEETRKVMDFVVELKEEGIEI 246
Query: 381 RVLDLGGGY--PGYTGYSMNRIAEIINVALDEYFPVEEGV---SIIAEPGRYYVASAFTL 435
++LGGG P Y + ++ + ++ ++ V ++I EPGR VA+A L
Sbjct: 247 EDVNLGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYL 306
Query: 436 ATLIHSKRD 444
+H ++
Sbjct: 307 LGKVHHIKE 315
>sp|Q9KCM5|DCDA_BACHD Diaminopimelate decarboxylase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=lysA PE=3 SV=1
Length = 439
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 260 FDCASKPISHIRYAAEYGIDTMTFDNEIELQKV----KQFHPTAQLVIRIRCDAE----- 310
F +K + I A E GI DN EL + +Q TA +++RI E
Sbjct: 107 FHGNNKSRAEIEMAVEAGIGCFVVDNFYELDLLADICEQKRATANILLRITPGVEAHTHD 166
Query: 311 -VAQCQLGMKFGCDPISEAPRLLRLAKSLDLD---VVGVSFHVGSGCGDPPVFGRAIYSA 366
++ Q KFG D +S L + K+L +D ++GV H+GS + F + +
Sbjct: 167 YISTGQEDSKFGFDLVS-GQATLAVKKALAVDSIHLLGVHSHIGSQIFETTGF---VMAV 222
Query: 367 RQIFD----LGNSLGFSMRVLDLGGGY-----PGYTGYSM-NRIAEIINVALDEYFPVEE 416
+IF+ GF VL+LGGG+ G T + + + E+I + E
Sbjct: 223 EKIFEHLVTWREDHGFEPSVLNLGGGFGIRYIEGDTPRPVGDYVKEMIRAVKQQIAEHEM 282
Query: 417 GV-SIIAEPGRYYVASAFTLATLIHSKRDI 445
+ I EPGR V A T I S+++I
Sbjct: 283 SMPEIWIEPGRSLVGDAGTTLYTIGSRKEI 312
>sp|Q5HG20|DCDA_STAAC Diaminopimelate decarboxylase OS=Staphylococcus aureus (strain COL)
GN=lysA PE=3 SV=1
Length = 421
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 251 EVLAALGTGFDCA-------SKPISHIRYAAEYGIDTMTFDNEIELQKVKQF-HPTAQLV 302
E+ AL GF+ + +K IRYA E I D+ E++ + ++ + T Q+V
Sbjct: 87 ELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQVV 146
Query: 303 IRIRCDAE------VAQCQLGMKFGCD-PISEAPRLL-RLAKSLDLDVVGVSFHVGSGCG 354
+R+ E + Q KFG A + + ++ +S L + GV H+GS
Sbjct: 147 LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQIE 206
Query: 355 DPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYPGYTGYSMNRIAEIINVALDEYFPV 414
F I +A+ + G + +L+LGGG+ I V DE FP+
Sbjct: 207 GTEAF---IETAKIVLRWLKEQGIQVELLNLGGGFG------------IKYVEGDESFPI 251
Query: 415 EEGVSIIAEP 424
E G+ I +
Sbjct: 252 ESGIKDITDA 261
>sp|Q9JWA6|DCDA_NEIMA Diaminopimelate decarboxylase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=lysA PE=3 SV=1
Length = 406
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 106/297 (35%), Gaps = 68/297 (22%)
Query: 188 YPRTDDMTQVPVYNYPDNVGMKEDAFYVLDVGEIVRKHEDWKLKLPRVDPY--YAVKCND 245
YPR + P+Y Y + + E ++ + P YAVK N
Sbjct: 10 YPRLAEAFGTPLYVYSQSA--------------LTEAFEHYQTAFAELSPLVCYAVKANG 55
Query: 246 SQMVLEVLAALGTGFDCAS-----------------------KPISHIRYAAEYGIDTMT 282
+ +++ A+LG+GFD S K + I +A G+
Sbjct: 56 NLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFN 115
Query: 283 FDNEIELQKVKQ----FHPTAQLVIRIRCDAE------VAQCQLGMKFGCDPISEAPRLL 332
++ E+ ++++ TA + +R+ D + ++ KFG
Sbjct: 116 MESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYR 175
Query: 333 RLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGG---- 388
A+ +L ++G+ H+GS D A + D + G + LDLGGG
Sbjct: 176 HAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIV 235
Query: 389 -----YPGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIH 440
P Y+ + ++I + +I EPGR V +A L T +
Sbjct: 236 YQDEDVPDLGAYA-QAVQKLIGT---------RRLKLILEPGRSLVGNAGALLTRVE 282
>sp|Q949X7|DCDA1_ARATH Diaminopimelate decarboxylase 1, chloroplastic OS=Arabidopsis
thaliana GN=LYSA1 PE=1 SV=1
Length = 484
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 104/267 (38%), Gaps = 58/267 (21%)
Query: 213 FYVLDVGEIVRKHEDWKLKLPRVDPY--YAVKCNDSQMVLEVLAALGTG----------- 259
FY+ +I R E +K L V YA+K N++ +LE L +LG G
Sbjct: 94 FYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRL 153
Query: 260 ------------FDCASKPISHIRYAAEYGIDTMTFDNEIELQKVKQFHPTA----QLVI 303
F+ K + + AA+ G+ + D+E +L + + + +++
Sbjct: 154 ALRAGFDPTKCIFNGNGKSLEDLVLAAQEGV-FVNVDSEFDLNNIVEASRISGKQVNVLL 212
Query: 304 RIRCDAE------VAQCQLGMKFG---------CDPISEAPRLLRLAKSLDLDVVGVSFH 348
RI D + VA KFG D + P+ L+L VG H
Sbjct: 213 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKL--------VGAHCH 264
Query: 349 VGSGCGDPPVFGRAIYSARQIFDLGNSLGFSMRVLDLGGGYP---GYTGYSMNRIAEIIN 405
+GS +F A + D GF + L++GGG + G + ++IN
Sbjct: 265 LGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLIN 324
Query: 406 VALDEYFPVEEGVSIIAEPGRYYVASA 432
+ + +++I EPGR +A+
Sbjct: 325 TVRE--LVLSRDLNLIIEPGRSLIANT 349
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 2 PYRETLVPSSVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVASTFN 55
P + V GP C+ D + D LP P G+ L+ D GAY + +AST+N
Sbjct: 396 PAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYN 449
>sp|Q9HK20|DCDA_THEAC Diaminopimelate decarboxylase OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=lysA PE=3 SV=2
Length = 402
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 108/270 (40%), Gaps = 38/270 (14%)
Query: 234 RVDPYYAVKCNDSQMVLEVLAALGTGFDCASK-----------PISHIRY----AAEYGI 278
RV Y+VK ND+ ++E++ G D AS P I Y A+EY +
Sbjct: 53 RVRMLYSVKANDNPRIIEIMHQESIGSDSASPMEIMMSIFSGIPPEDILYSPNNASEYDL 112
Query: 279 D-------TMTFDNEIELQKVKQFHPTAQLVIRIRCD---AEVAQCQLG---MKFGCDPI 325
+ + F+ + +K+++ ++ RI E A G KFG DP
Sbjct: 113 NFALDRGIAINFNTFTQYRKMRE--KPERISFRINPGFGMGEFAGTTTGGARTKFGIDP- 169
Query: 326 SEAPRLLRLAKSLDLDVVGVSFHVGSGCGDPPVFGRAIYSARQIFD-LGNSLGFSMRVLD 384
A R A+ + G+ +GS D A + +I D +G G S + D
Sbjct: 170 DAAILAYRKAREDGIREFGIHMMIGSNNRDHVKIAEAYSNFFRIADRIGREAGVSFQFAD 229
Query: 385 LGGGY--PGYTGYSMNRIAEIINVALDEYFPVEEGVSIIAEPGRYYVASAFTLATLIHSK 442
+GGG P G + IA + + L E+ G ++ EPGRY V A ++ +
Sbjct: 230 VGGGLGIPYVQGENELDIAALGSAVLKEFDRYHFG-DLVLEPGRYLVGDA---GIIVGTV 285
Query: 443 RDILGANSSVPTHTMYYINDGVYGSFNCII 472
D+ + I +YG+ + II
Sbjct: 286 NDVHNGFAGTDIGMNLNIRPALYGARHTII 315
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 1 YPYRETLVPS---------SVWGPTCDGLDKVNDDILLPEMPVGSWLIYRDMGAYTLPVA 51
Y R T++P +V G C+ D++ D + G ++ D GAY ++
Sbjct: 308 YGARHTIIPVGERVEGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLDAGAYVYSMS 365
Query: 52 STFNGFPIPKVHAVIEEHIWLMLKDR 77
S +NG P P ++E+ +M++ R
Sbjct: 366 SRYNGRPRPPEIMIMEDGKDVMIRRR 391
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,841,604
Number of Sequences: 539616
Number of extensions: 9793317
Number of successful extensions: 18234
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 17950
Number of HSP's gapped (non-prelim): 181
length of query: 522
length of database: 191,569,459
effective HSP length: 122
effective length of query: 400
effective length of database: 125,736,307
effective search space: 50294522800
effective search space used: 50294522800
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)