Query psy9379
Match_columns 161
No_of_seqs 159 out of 1161
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 17:35:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9379.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9379hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01387 MYSc_type_XV Myosin mo 100.0 1.3E-39 2.7E-44 295.0 9.8 130 1-131 365-509 (677)
2 PTZ00014 myosin-A; Provisional 100.0 1.2E-39 2.7E-44 299.2 9.3 130 1-131 466-611 (821)
3 cd01384 MYSc_type_XI Myosin mo 100.0 2E-39 4.4E-44 293.4 9.2 130 1-131 371-515 (674)
4 cd01381 MYSc_type_VII Myosin m 100.0 3.7E-39 7.9E-44 291.7 10.1 130 1-131 366-511 (671)
5 cd01383 MYSc_type_VIII Myosin 100.0 1.6E-39 3.5E-44 294.1 7.5 130 1-131 369-511 (677)
6 cd01385 MYSc_type_IX Myosin mo 100.0 3.8E-39 8.2E-44 292.4 9.2 130 1-131 380-525 (692)
7 cd01382 MYSc_type_VI Myosin mo 100.0 7.3E-39 1.6E-43 291.5 9.4 134 1-144 401-539 (717)
8 cd01378 MYSc_type_I Myosin mot 100.0 1.7E-38 3.7E-43 287.6 9.0 130 1-131 370-516 (674)
9 cd01380 MYSc_type_V Myosin mot 100.0 2.7E-38 5.8E-43 286.9 9.0 129 1-131 372-517 (691)
10 cd01379 MYSc_type_III Myosin m 100.0 4.1E-38 9E-43 284.1 9.3 129 1-131 377-520 (653)
11 cd01377 MYSc_type_II Myosin mo 100.0 5.6E-38 1.2E-42 284.9 9.7 130 1-131 378-525 (693)
12 smart00242 MYSc Myosin. Large 100.0 5.6E-38 1.2E-42 284.6 9.1 103 1-104 373-480 (677)
13 COG5022 Myosin heavy chain [Cy 100.0 1.5E-38 3.3E-43 297.3 5.5 136 1-137 432-585 (1463)
14 cd00124 MYSc Myosin motor doma 100.0 6.1E-37 1.3E-41 278.0 9.0 130 1-131 366-511 (679)
15 PF00063 Myosin_head: Myosin h 100.0 7.4E-36 1.6E-40 271.1 8.9 103 1-104 368-477 (689)
16 KOG0164|consensus 100.0 7.1E-36 1.5E-40 264.9 6.2 133 1-146 379-517 (1001)
17 cd01386 MYSc_type_XVIII Myosin 100.0 4.1E-35 8.8E-40 268.2 9.3 102 1-102 377-503 (767)
18 KOG0162|consensus 100.0 2.4E-34 5.2E-39 255.6 3.5 135 1-137 387-539 (1106)
19 KOG0161|consensus 100.0 3.8E-33 8.2E-38 269.6 5.7 123 1-128 452-585 (1930)
20 KOG0163|consensus 100.0 6.2E-30 1.4E-34 228.2 6.8 137 1-147 455-596 (1259)
21 KOG0160|consensus 100.0 7.3E-30 1.6E-34 233.1 6.4 129 1-131 372-515 (862)
22 KOG4229|consensus 99.9 8.8E-27 1.9E-31 217.1 5.9 133 1-134 431-579 (1062)
23 cd01383 MYSc_type_VIII Myosin 48.0 11 0.00023 35.3 1.6 19 126-144 477-495 (677)
24 KOG0164|consensus 45.5 6.3 0.00014 37.2 -0.3 131 2-133 388-533 (1001)
25 cd01382 MYSc_type_VI Myosin mo 43.9 6.1 0.00013 37.1 -0.6 35 98-132 522-556 (717)
26 cd00124 MYSc Myosin motor doma 40.9 9.8 0.00021 35.4 0.2 23 124-146 475-497 (679)
27 cd01379 MYSc_type_III Myosin m 38.1 9.2 0.0002 35.5 -0.4 23 125-147 485-507 (653)
28 cd01385 MYSc_type_IX Myosin mo 38.0 10 0.00023 35.4 -0.1 21 126-146 491-511 (692)
29 cd01387 MYSc_type_XV Myosin mo 36.1 9.7 0.00021 35.5 -0.6 22 125-146 474-495 (677)
30 cd01377 MYSc_type_II Myosin mo 35.6 11 0.00024 35.2 -0.3 24 124-147 489-512 (693)
31 smart00242 MYSc Myosin. Large 35.3 8.6 0.00019 35.8 -1.1 22 125-146 483-504 (677)
32 cd01378 MYSc_type_I Myosin mot 33.8 11 0.00023 35.2 -0.7 23 124-146 480-502 (674)
33 cd01384 MYSc_type_XI Myosin mo 33.3 13 0.00027 34.8 -0.3 23 125-147 480-502 (674)
34 PF00063 Myosin_head: Myosin h 33.1 8 0.00017 35.8 -1.6 26 106-131 493-518 (689)
35 cd01381 MYSc_type_VII Myosin m 33.0 13 0.00028 34.7 -0.3 22 125-146 476-497 (671)
36 KOG0162|consensus 32.8 30 0.00064 33.1 1.9 19 125-143 498-516 (1106)
37 PTZ00014 myosin-A; Provisional 32.3 13 0.00028 35.5 -0.4 21 126-146 577-597 (821)
38 COG2153 ElaA Predicted acyltra 32.3 21 0.00046 27.2 0.8 28 23-50 117-144 (155)
39 cd01380 MYSc_type_V Myosin mot 31.0 13 0.00028 34.8 -0.7 21 125-145 482-502 (691)
No 1
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=1.3e-39 Score=294.98 Aligned_cols=130 Identities=35% Similarity=0.489 Sum_probs=114.3
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|. .|+||||||||||||||++|++++|+.||++|.+|||+|..|+|.||++|+|||+++|.|||+|||||
T Consensus 365 ILDIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee 443 (677)
T cd01387 365 ILDIYGFEDLS-FNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQ 443 (677)
T ss_pred EEecCccccCC-CCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCC--CceEEee--------cccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDK--GRIRSKE--------RGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~--~~~~~~~--------~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++|+...+++|+.|.+|+.. .|++.|+ .|+++||+|.++.++..+
T Consensus 444 ~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~l 509 (677)
T cd01387 444 CCFPQATDHTFLQKCHYHHGANPLYSKPKMPLPEFTIKHYAGKVTYQVHKFLDKNHDQVRQDVLDL 509 (677)
T ss_pred hcCCCCchHHHHHHHHHhccCCccccCCCCCCCeeEEEEeCceeeecCCChHHhccchhhHHHHHH
Confidence 99 999999999999999999887642 2333333 344666666666665555
No 2
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=1.2e-39 Score=299.19 Aligned_cols=130 Identities=27% Similarity=0.339 Sum_probs=116.2
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|||||||||||||+||++|++++|+.||++|.+|||+|+.|+|.||++|+|||++||.|||++||||
T Consensus 466 iLDI~GFE~f~-~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEe 544 (821)
T PTZ00014 466 MLDIFGFEVFK-NNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQ 544 (821)
T ss_pred EEecccccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHH
Confidence 69999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCC---CCceEEee--------cccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKD---KGRIRSKE--------RGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~---~~~~~~~~--------~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||.+++++|+.|.+|+. ..|++.|+ .|+++||+|.++.++..+
T Consensus 545 c~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~l 611 (821)
T PTZ00014 545 CLAPGGTDEKFVSSCNTNLKNNPKYKPAKVDSNKNFVIKHTIGDIQYCASGFLFKNKDVLRPELVEV 611 (821)
T ss_pred hCCCCCCHHHHHHHHHHHhcCCCCccCCCCCCCCceEEEEeceeeeeccCcHHHhccccchHHHHHH
Confidence 99 99999999999999999998863 34444444 334667777666666655
No 3
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=2e-39 Score=293.38 Aligned_cols=130 Identities=35% Similarity=0.501 Sum_probs=113.0
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|. .|+|||||||||||+||++|++++|+.||++|.+|||+|+.|+|.||++|+|||+++|.|||++||||
T Consensus 371 iLDI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee 449 (674)
T cd01384 371 VLDIYGFESFK-TNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEA 449 (674)
T ss_pred EEecccccccC-cCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHH
Confidence 69999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCC--CceEEe--------ecccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDK--GRIRSK--------ERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~--~~~~~~--------~~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||.+++++|+.|.+|+.. .|++.| ..|+++||+|.++.++..+
T Consensus 450 ~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~l 515 (674)
T cd01384 450 CMFPKSTHETFAQKLYQTFKDHKRFEKPKLSRTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQAL 515 (674)
T ss_pred HcCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCeeEEEEecceeeecCCCHHHhcCCcccHHHHHH
Confidence 98 999999999999999999887642 223333 3334555555555555444
No 4
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=3.7e-39 Score=291.72 Aligned_cols=130 Identities=36% Similarity=0.561 Sum_probs=113.8
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|+||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|+|||++||.|||++||||
T Consensus 366 iLDIfGFE~f~-~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee 444 (671)
T cd01381 366 VLDIFGFENFD-VNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEE 444 (671)
T ss_pred EEecCCcccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHh
Confidence 69999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCC---CCceEEee--------cccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKD---KGRIRSKE--------RGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~---~~~~~~~~--------~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||.+.+++|+.|.+|+. ..|++.|+ .|+++||+|.++.++..+
T Consensus 445 ~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~l 511 (671)
T cd01381 445 SKFPKGTDQTMLEKLHSQHGLHSNYLKPKSTQETQFGINHFAGVVFYDTRGFLEKNRDTFSGDLSQL 511 (671)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCCcccCCCCCCCceEEEEecceEeeccCCHHHhccchhhHHHHHH
Confidence 99 99999999999999999987763 23333333 334556666665555555
No 5
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=1.6e-39 Score=294.12 Aligned_cols=130 Identities=34% Similarity=0.569 Sum_probs=120.6
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|+||||||||||||||++|++++|..||++|.+|||+|..|+|.||++|+|||+++|.|||++||||
T Consensus 369 iLDI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee 447 (677)
T cd01383 369 ILDIYGFESFD-KNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEE 447 (677)
T ss_pred EeeccccccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCCCceEEeec--------ccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDKGRIRSKER--------GEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~~~~~~~~~--------g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||.+++++|+.|.+++...|++.|++ |+++||+|.++.++..+
T Consensus 448 ~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~l 511 (677)
T cd01383 448 STFPNATDLTFANKLKQHLKTNSCFRGERGGAFTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQL 511 (677)
T ss_pred HcCCCCCHHHHHHHHHHHhCCCCCCCCCCCCceEEEEeccceeecCCChHHhccccccHHHHHH
Confidence 98 99999999999999999988876666666664 46888888888887776
No 6
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=3.8e-39 Score=292.44 Aligned_cols=130 Identities=39% Similarity=0.655 Sum_probs=112.2
Q ss_pred CceecCcccCCCC-chhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchh
Q psy9379 1 MYLYLALNAFSDE-ISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~-N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDe 79 (161)
||||||||+|+ . |+||||||||||||||++|++++|+.||++|.+|||+|+.|+|.||++|||||++||.|||++|||
T Consensus 380 iLDI~GFE~f~-~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLde 458 (692)
T cd01385 380 VLDIFGFEDFG-RCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDE 458 (692)
T ss_pred EEecCccccCC-CCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHH
Confidence 69999999999 8 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-----hchHHHHHhhcCCCCCceeccCC--CCceEEe--------ecccccccccccccccceE
Q psy9379 80 QAN-----THLLCTSFLSIPGHKERVEKEKD--KGRIRSK--------ERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 80 e~~-----d~~fl~kl~~~~~~~~~f~~~~~--~~~~~~~--------~~g~~~~~~~~~~~~l~~i 131 (161)
||+ |++|++||++.+++|+.|.+|+. ..|++.| ..|+++||+|.++.++..+
T Consensus 459 e~~~p~~td~~~l~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~l 525 (692)
T cd01385 459 ESNFPHATSQTLLAKFNQQHKDNKYYEGPQVKEPAFIIQHYAGKVKYQIKDFREKNMDLMRQDIVAL 525 (692)
T ss_pred HhcCCCCCHHHHHHHHHHHhCCCCCccCCCCCCCeEEEEEecceeeecCCCHHHhccccccHHHHHH
Confidence 998 99999999999999999988753 1223333 3334555555555555444
No 7
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=7.3e-39 Score=291.48 Aligned_cols=134 Identities=27% Similarity=0.450 Sum_probs=113.9
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|+||||||||||||||++|++++|..|+++|++|||+|+.++|.||++|+|||++||.|||++||||
T Consensus 401 iLDIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee 479 (717)
T cd01382 401 VLDIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEE 479 (717)
T ss_pred EEeccccccCC-CCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHH
Confidence 69999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCCCceEEeecccccccccccccccceEEeecCceeeeehh
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDKGRIRSKERGEEEGKKKKGTGSLMKIRRTQGKKYWFCKM 144 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~i~h~~g~~~y~~~~ 144 (161)
|+ |++|++||++.+++|+.|..|+..... . .+......-|.|+||||.|.|+++-
T Consensus 480 ~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~F~I~HyAG~V~Y~v~g 539 (717)
T cd01382 480 NRLPQPSDQHFTSVVHQKHKDHFRLTIPRKSKLA-V--------HRNLRDDEGFIIRHFAGAVCYETTQ 539 (717)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCcCccCCCccccc-c--------ccccCCCCCEEEEecceeEeecCCC
Confidence 99 999999999999999888766532210 0 0000112347777777777777663
No 8
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=1.7e-38 Score=287.57 Aligned_cols=130 Identities=29% Similarity=0.510 Sum_probs=111.3
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhc-CcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~-~p~GLlslLDe 79 (161)
||||||||+|. .|+||||||||||||||++|++++|..|+++|.+|||+|+.|+|.||++|+|||++ +|.|||++|||
T Consensus 370 ILDIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLde 448 (674)
T cd01378 370 VLDIYGFEIFQ-KNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDD 448 (674)
T ss_pred EEecccccccc-cccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHH
Confidence 69999999999 99999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred hhh------hchHHHHHhhcCCCCCceeccCC----------CCceEEeecccccccccccccccceE
Q psy9379 80 QAN------THLLCTSFLSIPGHKERVEKEKD----------KGRIRSKERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 80 e~~------d~~fl~kl~~~~~~~~~f~~~~~----------~~~~~~~~~g~~~~~~~~~~~~l~~i 131 (161)
||+ |++|++||++++++|+.+.+++. ++.|.|...|+++||+|.++.++..+
T Consensus 449 e~~~p~~~tD~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~l 516 (674)
T cd01378 449 VCATPHEGTDQTFLEKLNKKFSSHPHSDHFSSGSDEFRIKHYAGDVTYSVEGFCDKNKDTLFKDLIEL 516 (674)
T ss_pred HHcCCCCCChHHHHHHHHHHhccCCCCCCCCCCCCcEEEEEeceeeeecCcCHHHhhcchhhHHHHHH
Confidence 999 88999999999999988665543 22333333444555555555555544
No 9
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=2.7e-38 Score=286.94 Aligned_cols=129 Identities=35% Similarity=0.564 Sum_probs=114.8
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|+|||||||||||+||++|++++|+.||++|.+|||+|+.++|.||++|+|||++ |.|||++||||
T Consensus 372 iLDI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee 449 (691)
T cd01380 372 VLDIYGFETFE-KNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEE 449 (691)
T ss_pred EEecCcccccC-CCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHh
Confidence 69999999999 99999999999999999999999999999999999999999999999999999996 58999999999
Q ss_pred hh-----hchHHHHHhhcCC--CCCceeccCC--CCceEEee--------cccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPG--HKERVEKEKD--KGRIRSKE--------RGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~--~~~~f~~~~~--~~~~~~~~--------~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||+++++ +||.|.+|+. ..|++.|+ .|+++||+|.++.++..+
T Consensus 450 ~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~l 517 (691)
T cd01380 450 CRLPKGSDESWAQKLYNKLPKKKNPHFEKPRFGQTSFTVKHFADDVEYDVDGFLEKNRDTVSDEHLDV 517 (691)
T ss_pred hcCCCCChHHHHHHHHHHhcccCCCCccCCCCCCCeeEEEEccCCcccccccHHHhccccccHHHHHH
Confidence 99 9999999999998 8999988764 23444444 445777777777776665
No 10
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=4.1e-38 Score=284.06 Aligned_cols=129 Identities=34% Similarity=0.559 Sum_probs=107.7
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|. .|+||||||||||||||++|++++|..|+++|.+|||+|+.++|.||++|+|||++||.|||++||||
T Consensus 377 iLDI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee 455 (653)
T cd01379 377 ILDIFGFENFK-KNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEE 455 (653)
T ss_pred EEeccccccCC-CCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCC----------CCceEEeecccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKD----------KGRIRSKERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~----------~~~~~~~~~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++|+.+.++ ++.|.+|+. ++.|.|...|+++||+|.++.++..+
T Consensus 456 ~~~~~~td~~~~~kl~~~~~-~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~l 520 (653)
T cd01379 456 SRFPQATDQTLVEKFEDNLK-SKFFWRPKRVELSFGIHHYAGKVLYNASGFLEKNRDFLPADIVLL 520 (653)
T ss_pred hcCCCCCHHHHHHHHHHhcC-CCCccCCCCCCCceEEEEeceeEeecCCCHHHhccccccHHHHHH
Confidence 99 9999999998875 455666543 22223333334555555555544443
No 11
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=5.6e-38 Score=284.94 Aligned_cols=130 Identities=33% Similarity=0.558 Sum_probs=110.1
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCccccccc-CChhhHHHHhhcCcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldLi~~~p~GLlslLDe 79 (161)
||||||||+|+ .|+|||||||||||+||++|++++|+.|+++|.+|||+|+.++| .||++|+|||++||.|||++|||
T Consensus 378 iLDIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLde 456 (693)
T cd01377 378 VLDIAGFEIFD-FNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDE 456 (693)
T ss_pred EEecccccccC-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhH
Confidence 69999999999 99999999999999999999999999999999999999999999 59999999999999999999999
Q ss_pred hhh-----hchHHHHHhhcCCCCCcee--ccCC----------CCceEEeecccccccccccccccceE
Q psy9379 80 QAN-----THLLCTSFLSIPGHKERVE--KEKD----------KGRIRSKERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 80 e~~-----d~~fl~kl~~~~~~~~~f~--~~~~----------~~~~~~~~~g~~~~~~~~~~~~l~~i 131 (161)
||+ |++|++||.+.+++++.|. +++. ++.|.|...|+++||+|.++.++..+
T Consensus 457 e~~~~~~tD~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~l 525 (693)
T cd01377 457 ECVFPKATDKTFVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPLNDNVVGL 525 (693)
T ss_pred HhcCCCCCHHHHHHHHHHHhcCCCcccccCCCCCCCcEEEEeeceeEeeccccHHHhccccccHHHHHH
Confidence 998 9999999999999888872 2221 22233333444666666666655555
No 12
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=5.6e-38 Score=284.56 Aligned_cols=103 Identities=43% Similarity=0.766 Sum_probs=100.6
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|. .|+||||||||||||||++|++++|..|+++|.+|||+|+.++|.||++|||||+++|.|||++||||
T Consensus 373 iLDifGFE~f~-~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee 451 (677)
T smart00242 373 VLDIYGFEIFE-VNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEE 451 (677)
T ss_pred EEecccccccc-cCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccC
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEK 104 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~ 104 (161)
|+ |++|++||.+.+++|+.|.+|+
T Consensus 452 ~~~~~~td~~~~~kl~~~~~~~~~~~~~~ 480 (677)
T smart00242 452 CRFPKATDQTFLEKLNQTHEKHPHFSKPR 480 (677)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCCccCCC
Confidence 99 9999999999999999999874
No 13
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=1.5e-38 Score=297.29 Aligned_cols=136 Identities=32% Similarity=0.578 Sum_probs=122.2
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhc-CcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~-~p~GLlslLDe 79 (161)
||||||||+|+ .|||||||||||||+|||+|++|+|+.||++|.+|||+|..|+|.||++|+|||++ .|.|||++|||
T Consensus 432 VLDIyGFEiFE-kNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDE 510 (1463)
T COG5022 432 VLDIYGFEIFE-KNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDE 510 (1463)
T ss_pred EEeecchhhhc-cCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999996 47899999999
Q ss_pred hhh-----hchHHHHHhhcCC--CCCceeccCC--CCceEEeecc--------cccccccccccccceEEeecCc
Q psy9379 80 QAN-----THLLCTSFLSIPG--HKERVEKEKD--KGRIRSKERG--------EEEGKKKKGTGSLMKIRRTQGK 137 (161)
Q Consensus 80 e~~-----d~~fl~kl~~~~~--~~~~f~~~~~--~~~~~~~~~g--------~~~~~~~~~~~~l~~i~h~~g~ 137 (161)
||. |++|..||.+.+. +++.|.+++. .+||+.||+| +++||+|.++..++.+-+.+++
T Consensus 511 E~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StN 585 (1463)
T COG5022 511 ECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTN 585 (1463)
T ss_pred HhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccc
Confidence 999 9999999998885 5677887765 3567777654 6899999999999888665554
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=6.1e-37 Score=277.95 Aligned_cols=130 Identities=38% Similarity=0.635 Sum_probs=112.2
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|+ .|+|||||||||||+||++|++++|+.|+++|.+|||+|+.++|.||++|+|||+++|.|||++||||
T Consensus 366 iLDi~GFE~f~-~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee 444 (679)
T cd00124 366 ILDIFGFEIFE-KNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEE 444 (679)
T ss_pred EEeccccccCC-CCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCC-----------CCceEEeecccccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKD-----------KGRIRSKERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~-----------~~~~~~~~~g~~~~~~~~~~~~l~~i 131 (161)
|+ |++|++||.+.+++|+.|..++. ++.|.|...|+++||+|.++.++..+
T Consensus 445 ~~~~~~~d~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~l 511 (679)
T cd00124 445 CLFPKGTDETFLEKLNNKLKSNNAFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPELVSL 511 (679)
T ss_pred hCCCCCCHHHHHHHHHHHhcCCcccccCCCCCCCceEEEeeceeEEecCCCHHHhcCCcccHHHHHH
Confidence 98 99999999999999887643322 23333333445666666666665555
No 15
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=7.4e-36 Score=271.10 Aligned_cols=103 Identities=46% Similarity=0.809 Sum_probs=94.0
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCccccccc-CChhhHHHHhhcCcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldLi~~~p~GLlslLDe 79 (161)
||||||||++. .|+||||||||||||||++|++++|..++++|.+|||+|+.++| .||++|+|||+++|.|||++|||
T Consensus 368 ILDi~GFE~~~-~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLde 446 (689)
T PF00063_consen 368 ILDIFGFENFS-VNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDE 446 (689)
T ss_dssp EEEEE-B---S-SB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHH
T ss_pred ccCcccccccc-ccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhh
Confidence 69999999999 99999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hhh-----hchHHHHHhhcC-CCCCceeccC
Q psy9379 80 QAN-----THLLCTSFLSIP-GHKERVEKEK 104 (161)
Q Consensus 80 e~~-----d~~fl~kl~~~~-~~~~~f~~~~ 104 (161)
||+ |++|+++|.+.+ ++++.|.+++
T Consensus 447 e~~~~~~sd~~fl~kl~~~~~~~~~~~~~~~ 477 (689)
T PF00063_consen 447 ECLLPRGSDESFLEKLLKRHSGKHPSFVKPR 477 (689)
T ss_dssp HCTSTTS-HHHHHHHHHHHHTTTSTTEECTS
T ss_pred hhhcccchhhHHHHHHHhhcccCCCcccccc
Confidence 999 999999999999 8999998874
No 16
>KOG0164|consensus
Probab=100.00 E-value=7.1e-36 Score=264.88 Aligned_cols=133 Identities=30% Similarity=0.453 Sum_probs=117.9
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
+|||||||+|+ .|||||||||||||+||+.|++.+++.||+||.+|||+|.+|+|++|..++||++.+..|||+||||+
T Consensus 379 vldiygfeif~-~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~ 457 (1001)
T KOG0164|consen 379 VLDIYGFEIFQ-DNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEA 457 (1001)
T ss_pred EEEeeeEEeec-CCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHH
Confidence 58999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh------hchHHHHHhhcCCCCCceeccCCCCceEEeecccccccccccccccceEEeecCceeeeehhhh
Q psy9379 81 AN------THLLCTSFLSIPGHKERVEKEKDKGRIRSKERGEEEGKKKKGTGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 81 ~~------d~~fl~kl~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
|+ |.+||++|.+.+++|++|...+... +.+.+.-.-|.|.||||.|.|.+.-|+
T Consensus 458 Cl~~G~vtD~tfL~~l~~~~~~H~Hy~sr~~~~------------~dksl~~~~Fri~HYAG~V~YsV~gFi 517 (1001)
T KOG0164|consen 458 CLRPGTVTDETFLEKLNQKLKKHPHYTSRKLKQ------------TDKSLGFSDFRITHYAGDVTYSVEGFI 517 (1001)
T ss_pred hcCCCccchHHHHHHHHHHhhhCCcchhhhccc------------cccccCccceeEEEeccceEEEEEeee
Confidence 99 9999999999999999997765431 112223346888888888888776444
No 17
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=4.1e-35 Score=268.21 Aligned_cols=102 Identities=26% Similarity=0.419 Sum_probs=94.0
Q ss_pred CceecCcccCCC-----CchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCccccccc-CChhhHHHHhhcCc----
Q psy9379 1 MYLYLALNAFSD-----EISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP---- 70 (161)
Q Consensus 1 ilDi~GFE~f~~-----~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldLi~~~p---- 70 (161)
||||||||+|+. .|+|||||||||||+||++|++++|+.||++|.+|||+|+.+.+ .||++|++||+++|
T Consensus 377 iLDIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~ 456 (767)
T cd01386 377 LVDTPGFQNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVV 456 (767)
T ss_pred EEecccccccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhccccccc
Confidence 699999999972 38999999999999999999999999999999999999986555 79999999999865
Q ss_pred ----------Ccccccchhhhh-----hchHHHHHhhcCCCCCceec
Q psy9379 71 ----------NGLLCVLDDQAN-----THLLCTSFLSIPGHKERVEK 102 (161)
Q Consensus 71 ----------~GLlslLDee~~-----d~~fl~kl~~~~~~~~~f~~ 102 (161)
.|||++|||||+ |++|++||.+.+++|+.|.+
T Consensus 457 ~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~~~~~~ 503 (767)
T cd01386 457 VPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFAAYGDRETRET 503 (767)
T ss_pred ccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHHHhccCCCccc
Confidence 599999999999 99999999999998888866
No 18
>KOG0162|consensus
Probab=100.00 E-value=2.4e-34 Score=255.64 Aligned_cols=135 Identities=27% Similarity=0.498 Sum_probs=122.4
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhc-CcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~-~p~GLlslLDe 79 (161)
||||||||+|+ .|+||||||||.||+||+.|++.+++.||++|.+|||.|.+|.|+||.-++|||+. +|.||+++|||
T Consensus 387 iLDIYGFEIFe-~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD 465 (1106)
T KOG0162|consen 387 ILDIYGFEIFE-NNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDD 465 (1106)
T ss_pred eEEeeeeeecc-cCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999999999999986 68899999999
Q ss_pred hhh---------hchHHHHHhhcCCCCCceeccCCCCceEEee--------cccccccccccccccceEEeecCc
Q psy9379 80 QAN---------THLLCTSFLSIPGHKERVEKEKDKGRIRSKE--------RGEEEGKKKKGTGSLMKIRRTQGK 137 (161)
Q Consensus 80 e~~---------d~~fl~kl~~~~~~~~~f~~~~~~~~~~~~~--------~g~~~~~~~~~~~~l~~i~h~~g~ 137 (161)
.|. |.+|+++|++.++.||+|-. ++.+|++.|| .|++++|+|.+..+|+.+.+++..
T Consensus 466 ~~At~Ha~~~~aDqa~~qrLn~~~~s~phF~~-~s~~FvIkHYAGdVtYdi~G~~drNrD~L~~DlieLm~ts~~ 539 (1106)
T KOG0162|consen 466 VCATAHADSEGADQALLQRLNKLFGSHPHFES-RSNGFVIKHYAGDVTYDIDGFCDRNRDVLFKDLIELMQTSEN 539 (1106)
T ss_pred HHHHhccccchhHHHHHHHHHHHhcCCCcccc-ccCceEEEEeccceeeecccccccchhHHHHHHHHHHhccch
Confidence 998 99999999999999999954 5556666666 456889999999999988555443
No 19
>KOG0161|consensus
Probab=99.97 E-value=3.8e-33 Score=269.58 Aligned_cols=123 Identities=36% Similarity=0.589 Sum_probs=111.0
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCccccccc-CChhhHHHHhhcCcCcccccchh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDD 79 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldLi~~~p~GLlslLDe 79 (161)
||||+|||+|+ .||||||||||+||+||++|++++|..+|++|.+|||.|..|+| .|-+||++||+ +|.||+|+|||
T Consensus 452 vLDiaGFEIfe-~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~Gi~slLdE 529 (1930)
T KOG0161|consen 452 VLDIAGFEIFE-FNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMGILSLLDE 529 (1930)
T ss_pred eeeeccccccC-cCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhhHHHHHHH
Confidence 79999999999 99999999999999999999999999999999999999999999 79999999999 57899999999
Q ss_pred hhh-----hchHHHHHhhcC-CCCCceeccC----CCCceEEeeccccccccccccccc
Q psy9379 80 QAN-----THLLCTSFLSIP-GHKERVEKEK----DKGRIRSKERGEEEGKKKKGTGSL 128 (161)
Q Consensus 80 e~~-----d~~fl~kl~~~~-~~~~~f~~~~----~~~~~~~~~~g~~~~~~~~~~~~l 128 (161)
+|. |.+|++||.+.| |+||.|.+|+ ..+|++.||+|. +.|++.+||
T Consensus 530 Ec~~PkAtd~tf~~kL~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~---V~Y~~~~WL 585 (1930)
T KOG0161|consen 530 ECVVPKATDKTFLEKLCDQHLGKHPKFQKPKGKKAEAHFALVHYAGT---VDYNVDGWL 585 (1930)
T ss_pred HHhcCCCccchHHHHHHHHhhccCccccCcccccchhhhheeeecce---eccCccchh
Confidence 999 999999999999 9999999995 256777777776 334444444
No 20
>KOG0163|consensus
Probab=99.96 E-value=6.2e-30 Score=228.24 Aligned_cols=137 Identities=30% Similarity=0.491 Sum_probs=114.8
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
+|||+|||.|. .||||||||||+||+||+||++++++.||+.|.+||+.++.|.|.||++||+||+.|..|||.|||||
T Consensus 455 VLDiAGFEyf~-~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEE 533 (1259)
T KOG0163|consen 455 VLDIAGFEYFA-VNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEE 533 (1259)
T ss_pred EEeeccceeee-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhh
Confidence 58999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCCCceEEeecccccccccccccccceEEeecCceeeeehhhhh
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDKGRIRSKERGEEEGKKKKGTGSLMKIRRTQGKKYWFCKMAMK 147 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~i~h~~g~~~y~~~~~~~ 147 (161)
.+ +..|-.+.++.+++|-.+..|+...- ..|- .-+ ...=|.|||+||.|.|.-+.|+.
T Consensus 534 aklP~~s~qhFT~~vHe~~k~HfRL~~PRkSkl-ksHR-----~lR---DdEG~liRHfAGaVCYeT~~FvE 596 (1259)
T KOG0163|consen 534 AKLPKPSYQHFTARVHESNKNHFRLDLPRKSKL-KSHR-----ELR---DDEGFLIRHFAGAVCYETEQFVE 596 (1259)
T ss_pred ccCCCcchHHHHHHHHHhhhcceeecCCchhhh-hhhh-----hhc---cccceeeeecccceeechHHHHH
Confidence 99 78899999999888877766654210 0000 000 11127788888888887775543
No 21
>KOG0160|consensus
Probab=99.96 E-value=7.3e-30 Score=233.13 Aligned_cols=129 Identities=38% Similarity=0.594 Sum_probs=120.6
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
+|||||||.|+ .|+|||||||||||+||+.|++|+|+.|+++|..|+|+|+.++|.||++|+++|++ |.|+++||||+
T Consensus 372 VLDiYgFEsF~-~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~ 449 (862)
T KOG0160|consen 372 VLDIYGFESFE-VNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEE 449 (862)
T ss_pred eehcccccccc-cCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccchh
Confidence 69999999999 99999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCC--CceEEeecc--------cccccccccccccceE
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDK--GRIRSKERG--------EEEGKKKKGTGSLMKI 131 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~--~~~~~~~~g--------~~~~~~~~~~~~l~~i 131 (161)
|. |++|..||...+..|+.|.+|+.. .+++.||+| |++||+|.++..+..+
T Consensus 450 c~lp~~t~~~~a~KL~~~~~~~~~f~kpr~~~~~f~v~hyAg~v~y~~~~fL~knrd~v~~el~~l 515 (862)
T KOG0160|consen 450 CMLPKGTDETLAQKLYQTLKRNKRFTKPRLSRTDFRVAHYAGDVTYDTEGFLEKNRDYVSDELIDL 515 (862)
T ss_pred ccCCCCCcchHHHHHHHHhccCCccCCCCCCcCCcccccccCccccchhhhccCCccccCHHHHhh
Confidence 98 999999999999999999999875 567777766 7999999998887666
No 22
>KOG4229|consensus
Probab=99.93 E-value=8.8e-27 Score=217.11 Aligned_cols=133 Identities=37% Similarity=0.583 Sum_probs=114.6
Q ss_pred CceecCcccCCCCchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhcCcCcccccchhh
Q psy9379 1 MYLYLALNAFSDEISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 80 (161)
Q Consensus 1 ilDi~GFE~f~~~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~~p~GLlslLDee 80 (161)
||||||||+|. .|+|||+|||+|||+||.+|++++|..|+++|..|+|.|..+.|.||.+|++||..||.||+.+|||+
T Consensus 431 iLdiFgfE~f~-~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDee 509 (1062)
T KOG4229|consen 431 ILDIFGFENFE-RNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEE 509 (1062)
T ss_pred hhhhhcccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheeccc
Confidence 69999999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-----hchHHHHHhhcCCCCCceeccCCC---CceEEeecc--------cccccccccccccceEEee
Q psy9379 81 AN-----THLLCTSFLSIPGHKERVEKEKDK---GRIRSKERG--------EEEGKKKKGTGSLMKIRRT 134 (161)
Q Consensus 81 ~~-----d~~fl~kl~~~~~~~~~f~~~~~~---~~~~~~~~g--------~~~~~~~~~~~~l~~i~h~ 134 (161)
+. |.+++.|++.+|+.+..|..++.. .+.+.||+| ++++|+|.+..++....+.
T Consensus 510 s~fP~~td~tl~~k~~~q~~~~~~y~~~k~~~e~~f~I~Hyagkv~y~~~~flekNrD~~~~d~~~~~~s 579 (1062)
T KOG4229|consen 510 SRFPKATDQTLLLKLNMQHGSNNLYVFPKSRVETVFGITHYAGKVQYNIRGFLEKNRDTVRNDLVNLLRS 579 (1062)
T ss_pred CcCCchHHHHHHHHhhhhhhcccccccccccccceeeeeeecceehhhhhhHHHhhhhhhhhhHHhhccc
Confidence 97 999999999999988888777763 334444433 4666666666555554333
No 23
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=47.98 E-value=11 Score=35.32 Aligned_cols=19 Identities=16% Similarity=0.242 Sum_probs=16.6
Q ss_pred cccceEEeecCceeeeehh
Q psy9379 126 GSLMKIRRTQGKKYWFCKM 144 (161)
Q Consensus 126 ~~l~~i~h~~g~~~y~~~~ 144 (161)
+.-|.|+||||.|.|++.-
T Consensus 477 ~~~F~I~HyAG~V~Y~v~g 495 (677)
T cd01383 477 GGAFTVRHYAGEVTYDTTG 495 (677)
T ss_pred CCceEEEEeccceeecCCC
Confidence 3579999999999999983
No 24
>KOG0164|consensus
Probab=45.50 E-value=6.3 Score=37.21 Aligned_cols=131 Identities=12% Similarity=0.118 Sum_probs=86.8
Q ss_pred ceecCcccCCC---CchhhhhhhhhhhhhhHHHHHHhhhhhhHHHHhhhCCcccccccCChhhHHHHhhc---CcC----
Q psy9379 2 YLYLALNAFSD---EISFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG---KPN---- 71 (161)
Q Consensus 2 lDi~GFE~f~~---~N~feQl~iN~anE~Lq~~~~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldLi~~---~p~---- 71 (161)
++---||.|-= ..-+.||.|-..=..=|.-|..--..+..-+|-.-+|-+..++-+ ...++.+|+. +|+
T Consensus 388 f~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~-~~GIlailDe~Cl~~G~vtD 466 (1001)
T KOG0164|consen 388 FQDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQP-HKGILAILDEACLRPGTVTD 466 (1001)
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccC-ccchhhhhhHHhcCCCccch
Confidence 34445665530 235889999888777788888878888888888888877666543 2345555554 232
Q ss_pred -cccccchhhhh-hchHHHHHhhcC---CCCCceeccCCCCceEEeecccccccccccccccceEEe
Q psy9379 72 -GLLCVLDDQAN-THLLCTSFLSIP---GHKERVEKEKDKGRIRSKERGEEEGKKKKGTGSLMKIRR 133 (161)
Q Consensus 72 -GLlslLDee~~-d~~fl~kl~~~~---~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~i~h 133 (161)
-+|.-||.-+. ...|..+..+.. -.+..|.-.+-++.++|...||+.||+|.+.++|-...+
T Consensus 467 ~tfL~~l~~~~~~H~Hy~sr~~~~~dksl~~~~Fri~HYAG~V~YsV~gFidKN~D~Lf~dlk~~m~ 533 (1001)
T KOG0164|consen 467 ETFLEKLNQKLKKHPHYTSRKLKQTDKSLGFSDFRITHYAGDVTYSVEGFIDKNNDLLFQDLKRLMY 533 (1001)
T ss_pred HHHHHHHHHHhhhCCcchhhhccccccccCccceeEEEeccceEEEEEeeeccCccHHHHHHHHHHH
Confidence 23455555555 444444433222 134567777778999999999999999999988866633
No 25
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=43.94 E-value=6.1 Score=37.11 Aligned_cols=35 Identities=14% Similarity=-0.056 Sum_probs=28.2
Q ss_pred CceeccCCCCceEEeecccccccccccccccceEE
Q psy9379 98 ERVEKEKDKGRIRSKERGEEEGKKKKGTGSLMKIR 132 (161)
Q Consensus 98 ~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~i~ 132 (161)
+.|.-.+-++.|.|...|+++||+|.++.++..+-
T Consensus 522 ~~F~I~HyAG~V~Y~v~gfleKNkD~l~~~~~~ll 556 (717)
T cd01382 522 EGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLI 556 (717)
T ss_pred CCEEEEecceeEeecCCChHHhcCccccHHHHHHH
Confidence 35666667788888888899999999999887663
No 26
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=40.93 E-value=9.8 Score=35.43 Aligned_cols=23 Identities=9% Similarity=0.122 Sum_probs=18.9
Q ss_pred cccccceEEeecCceeeeehhhh
Q psy9379 124 GTGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 124 ~~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
....-|.|+||||.|.|++.-++
T Consensus 475 ~~~~~F~I~HyAG~V~Y~v~gfl 497 (679)
T cd00124 475 NAPTEFTIKHYAGDVTYDARGFL 497 (679)
T ss_pred CCCCceEEEeeceeEEecCCCHH
Confidence 34568999999999999998443
No 27
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=38.10 E-value=9.2 Score=35.55 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=18.9
Q ss_pred ccccceEEeecCceeeeehhhhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMAMK 147 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~~~ 147 (161)
...-|.|+||||.|.|+++-++.
T Consensus 485 ~~~~F~I~HyAG~V~Y~~~gfle 507 (653)
T cd01379 485 VELSFGIHHYAGKVLYNASGFLE 507 (653)
T ss_pred CCCceEEEEeceeEeecCCCHHH
Confidence 34579999999999999985554
No 28
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=37.99 E-value=10 Score=35.41 Aligned_cols=21 Identities=19% Similarity=0.074 Sum_probs=17.8
Q ss_pred cccceEEeecCceeeeehhhh
Q psy9379 126 GSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 126 ~~l~~i~h~~g~~~y~~~~~~ 146 (161)
..-|.|+||||.|.|++.-++
T Consensus 491 ~~~F~I~HyAG~V~Y~~~gfl 511 (692)
T cd01385 491 EPAFIIQHYAGKVKYQIKDFR 511 (692)
T ss_pred CCeEEEEEecceeeecCCCHH
Confidence 457999999999999998543
No 29
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=36.09 E-value=9.7 Score=35.53 Aligned_cols=22 Identities=14% Similarity=0.117 Sum_probs=18.1
Q ss_pred ccccceEEeecCceeeeehhhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
...-|.|+||||.|.|++.-++
T Consensus 474 ~~~~F~I~HyAG~V~Y~~~gfl 495 (677)
T cd01387 474 PLPEFTIKHYAGKVTYQVHKFL 495 (677)
T ss_pred CCCeeEEEEeCceeeecCCChH
Confidence 3457999999999999998443
No 30
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=35.56 E-value=11 Score=35.20 Aligned_cols=24 Identities=4% Similarity=-0.024 Sum_probs=19.6
Q ss_pred cccccceEEeecCceeeeehhhhh
Q psy9379 124 GTGSLMKIRRTQGKKYWFCKMAMK 147 (161)
Q Consensus 124 ~~~~l~~i~h~~g~~~y~~~~~~~ 147 (161)
.....|.|+||||.|.|+++-++.
T Consensus 489 ~~~~~F~I~HyAG~V~Y~~~gfle 512 (693)
T cd01377 489 KAKAHFSLVHYAGTVDYNIDGWLE 512 (693)
T ss_pred CCCCcEEEEeeceeEeeccccHHH
Confidence 456689999999999999985443
No 31
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=35.26 E-value=8.6 Score=35.82 Aligned_cols=22 Identities=9% Similarity=0.025 Sum_probs=14.4
Q ss_pred ccccceEEeecCceeeeehhhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
....|.|+||||.|.|++.-++
T Consensus 483 ~~~~F~I~H~AG~V~Y~~~gfl 504 (677)
T smart00242 483 GRTEFIIKHYAGDVTYDVTGFL 504 (677)
T ss_pred CCCeEEEEecceeEeecCccHH
Confidence 3456777777777777776443
No 32
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=33.83 E-value=11 Score=35.20 Aligned_cols=23 Identities=9% Similarity=0.092 Sum_probs=19.2
Q ss_pred cccccceEEeecCceeeeehhhh
Q psy9379 124 GTGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 124 ~~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
....-|.|+||||.|.|+++-++
T Consensus 480 ~~~~~F~I~HyAG~V~Y~~~gfl 502 (674)
T cd01378 480 SGSDEFRIKHYAGDVTYSVEGFC 502 (674)
T ss_pred CCCCcEEEEEeceeeeecCcCHH
Confidence 35678999999999999998544
No 33
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=33.28 E-value=13 Score=34.82 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=19.0
Q ss_pred ccccceEEeecCceeeeehhhhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMAMK 147 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~~~ 147 (161)
.+.-|.|+||||.|.|+++-+++
T Consensus 480 ~~~~F~I~HyAG~V~Y~v~gfle 502 (674)
T cd01384 480 SRTAFTIDHYAGDVTYQTDQFLD 502 (674)
T ss_pred CCCeeEEEEecceeeecCCCHHH
Confidence 45689999999999999985543
No 34
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=33.07 E-value=8 Score=35.82 Aligned_cols=26 Identities=12% Similarity=0.192 Sum_probs=10.6
Q ss_pred CCceEEeecccccccccccccccceE
Q psy9379 106 KGRIRSKERGEEEGKKKKGTGSLMKI 131 (161)
Q Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~l~~i 131 (161)
++.|.|...|++++|+|.++.++..+
T Consensus 493 aG~V~Y~v~gfleKNrD~l~~~~~~l 518 (689)
T PF00063_consen 493 AGDVTYDVEGFLEKNRDPLSQDFVSL 518 (689)
T ss_dssp TEEEEEE-TTHHHHHHE-S-HHHHHH
T ss_pred cCcceeccccccccccchHHHHHHHH
Confidence 34444444444445554444444444
No 35
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=32.97 E-value=13 Score=34.69 Aligned_cols=22 Identities=9% Similarity=0.141 Sum_probs=18.4
Q ss_pred ccccceEEeecCceeeeehhhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~~ 146 (161)
...-|.|+||||.|.|++.-++
T Consensus 476 ~~~~F~I~HyAG~V~Y~~~gfl 497 (671)
T cd01381 476 QETQFGINHFAGVVFYDTRGFL 497 (671)
T ss_pred CCCceEEEEecceEeeccCCHH
Confidence 3567999999999999998544
No 36
>KOG0162|consensus
Probab=32.76 E-value=30 Score=33.09 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=16.4
Q ss_pred ccccceEEeecCceeeeeh
Q psy9379 125 TGSLMKIRRTQGKKYWFCK 143 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~ 143 (161)
..+-|.|+||||.|+|+.+
T Consensus 498 ~s~~FvIkHYAGdVtYdi~ 516 (1106)
T KOG0162|consen 498 RSNGFVIKHYAGDVTYDID 516 (1106)
T ss_pred ccCceEEEEeccceeeecc
Confidence 4456999999999999987
No 37
>PTZ00014 myosin-A; Provisional
Probab=32.33 E-value=13 Score=35.54 Aligned_cols=21 Identities=14% Similarity=0.153 Sum_probs=18.0
Q ss_pred cccceEEeecCceeeeehhhh
Q psy9379 126 GSLMKIRRTQGKKYWFCKMAM 146 (161)
Q Consensus 126 ~~l~~i~h~~g~~~y~~~~~~ 146 (161)
..-|.|+||||.|.|+++-++
T Consensus 577 ~~~F~I~HyAG~V~Y~~~gfl 597 (821)
T PTZ00014 577 NKNFVIKHTIGDIQYCASGFL 597 (821)
T ss_pred CCceEEEEeceeeeeccCcHH
Confidence 457999999999999998554
No 38
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=32.31 E-value=21 Score=27.19 Aligned_cols=28 Identities=36% Similarity=0.502 Sum_probs=25.9
Q ss_pred hhhhhhHHHHHHhhhhhhHHHHhhhCCc
Q psy9379 23 YANEHLQYYFNQHVFQYEQEEYNKEGIR 50 (161)
Q Consensus 23 ~anE~Lq~~~~~~~f~~e~~~y~~EgI~ 50 (161)
-|++.||.+|.++=|....++|.++||+
T Consensus 117 ~AQahLq~fYa~~GFv~~~e~yledGIp 144 (155)
T COG2153 117 GAQAHLQDFYASFGFVRVGEEYLEDGIP 144 (155)
T ss_pred ehHHHHHHHHHHhCcEEcCchhhcCCCC
Confidence 4789999999999999999999999995
No 39
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=31.02 E-value=13 Score=34.82 Aligned_cols=21 Identities=0% Similarity=-0.100 Sum_probs=17.7
Q ss_pred ccccceEEeecCceeeeehhh
Q psy9379 125 TGSLMKIRRTQGKKYWFCKMA 145 (161)
Q Consensus 125 ~~~l~~i~h~~g~~~y~~~~~ 145 (161)
...-|.|+||||.|.|+.+-+
T Consensus 482 ~~~~F~I~HyAG~V~Y~v~gf 502 (691)
T cd01380 482 GQTSFTVKHFADDVEYDVDGF 502 (691)
T ss_pred CCCeeEEEEccCCcccccccH
Confidence 346799999999999999833
Done!