RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy938
(241 letters)
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus
stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E*
1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Length = 419
Score = 167 bits (426), Expect = 4e-50
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 5/196 (2%)
Query: 8 GLTTPIIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLA 67
GLT P++ G KFGK+ IWLD + +S +E YQ+ I T D +V LK F+F S
Sbjct: 217 GLTIPLVTKADGTKFGKTESGTIWLDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKE 276
Query: 68 AIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLDSLGSLNAT 127
IE +++ PE+R AQK LAE++T LVHGEE L+ A ++AL+S D+ +L A
Sbjct: 277 EIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRISEALFSGDIA---NLTAA 333
Query: 128 DASRIFPGARIVELLMEPGMSMLELSLATKCFPRDKEANLTISEGGFYVNYKKVQNPQEV 187
+ + F + ++EL ++ P ++A I G YVN +++Q+ +
Sbjct: 334 EIEQGFKDVPSFVHEGG-DVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAI 392
Query: 188 LSPSAHILPNSLTLLR 203
L+ H L T++R
Sbjct: 393 LTAE-HRLEGRFTVIR 407
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design,
ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP:
c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Length = 420
Score = 167 bits (425), Expect = 7e-50
Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 8 GLTTPIIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLA 67
GLT P++ G+KFGKS A+WLD++ +S +E YQ+ I D +V LK F+F
Sbjct: 218 GLTIPLVTKSDGKKFGKSESGAVWLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKE 277
Query: 68 AIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLDSLGSLNAT 127
I+ ++ P R AQK LAE++T +HGE+ L A +QAL+S DL SL+A
Sbjct: 278 EIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRISQALFSGDLK---SLSAK 334
Query: 128 DASRIFPGARIVELLMEPGMSMLELSLATKCFPRDKEANLTISEGGFYVNYKKVQNPQEV 187
+ F V L + +++E+ + T P ++A ++ G Y+N ++ Q+
Sbjct: 335 ELKDGFKDVPQVTLSND-TTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYA 393
Query: 188 LSPSAHILPNSLTLLR 203
L+P + T++R
Sbjct: 394 LAPE-DKIDGEFTIIR 408
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA
synthetase, tyrrs, ligase, tyrosine, RNA-binding,
ATP-binding; 2.9A {Mycobacterium tuberculosis}
Length = 432
Score = 167 bits (424), Expect = 1e-49
Identities = 59/197 (29%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 8 GLTTPIIESESGEKFGKS-ARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSL 66
LT P++ + G KFGKS ++WLD +++S + YQY + T D++V L+ F+F S
Sbjct: 218 ALTVPLVTAADGTKFGKSTGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSA 277
Query: 67 AAIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLDSLGSLNA 126
+ + ++ +P++R AQ++LA +LT+LVHGE + + A++AL+ + L L+
Sbjct: 278 DELAELEQATAQRPQQRAAQRRLASELTVLVHGEAATAAVEHASRALFGR--GELARLDE 335
Query: 127 TDASRIFPGARIVELLMEPGMSMLELSLATKCFPRDKEANLTISEGGFYVNYKKVQNPQE 186
+ + EL +++L +A+ A TI EGG VN +V N +
Sbjct: 336 ATLAAALRETTVAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEW 395
Query: 187 VLSPSAHILPNSLTLLR 203
V + L +LR
Sbjct: 396 VPQS-SDFLHGRWLVLR 411
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase,
protein-substrate complex, ATP-BI ligase, mitochondrion,
nucleotide-binding, protein biosynth; HET: YSA; 2.20A
{Homo sapiens} PDB: 3zxi_A*
Length = 356
Score = 150 bits (380), Expect = 8e-44
Identities = 54/113 (47%), Positives = 71/113 (62%)
Query: 8 GLTTPIIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLA 67
G+T P+I S +G K GKSA NA+WL+ +S FELYQ+ +R D V LKLF+F L
Sbjct: 241 GITVPLITSTTGAKLGKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLP 300
Query: 68 AIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLDS 120
I+ + + +PE R QK+LA ++T LVHG EGL SAK TQALY +
Sbjct: 301 EIDHIMQLHVKEPERRGPQKRLAAEVTKLVHGREGLDSAKRCTQALYHRSHHH 353
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group
I intron; HET: TYR; 1.95A {Neurospora crassa} PDB:
2rkj_A
Length = 392
Score = 149 bits (379), Expect = 2e-43
Identities = 44/112 (39%), Positives = 66/112 (58%)
Query: 8 GLTTPIIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLA 67
G T P++ SG KFGKSA NAIWLD +S F+ Y Y +R D EV +LLKLF+F ++
Sbjct: 280 GFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKLFTFMPIS 339
Query: 68 AIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLD 119
I ++ P +R AQ LA ++ LVHG++ +A+ + +Y+ +
Sbjct: 340 EITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQMT 391
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural
genomics, NPPSFA, natio project on protein structural
and functional analyses; HET: AZY; 1.80A {Escherichia
coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Length = 322
Score = 126 bits (319), Expect = 4e-35
Identities = 46/100 (46%), Positives = 66/100 (66%)
Query: 8 GLTTPIIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLA 67
GLT P+I G KFGK+ A+WLD K +S ++ YQ+ I T D++VY LK F+F S+
Sbjct: 222 GLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIE 281
Query: 68 AIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAK 107
I + ++++ + RAQ LAE +T LVHGEEGL++AK
Sbjct: 282 EINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAK 321
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET:
TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1
d.66.1.4 PDB: 1h3e_A*
Length = 432
Score = 88.2 bits (219), Expect = 2e-20
Identities = 34/208 (16%), Positives = 60/208 (28%), Gaps = 28/208 (13%)
Query: 8 GLTTPIIESESG-EKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSL 66
P++ G EK KS N I L +++ L+R D + +L +
Sbjct: 218 CFLMPLLVGLDGREKMSKSLDNYIGLTE---PPEAMFKKLMRVPDPLLPSYFRLLTDLEE 274
Query: 67 AAIEDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQDLDSLGSLNA 126
IE + A + LA LT + A ++ G
Sbjct: 275 EEIEALLKAG-----PVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKE 329
Query: 127 TDA----------SRIFPGARIVEL---------LMEPGMSMLELSLATKCFPRDKEANL 167
+ G E+ L E + + L P + EA
Sbjct: 330 AGPEEVRRAEARYDEVAKGGIPEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARR 389
Query: 168 TISEGGFYVNYKKVQNPQEVLSPSAHIL 195
I G ++ + + +P + S +
Sbjct: 390 LIQNRGLRLDGEVLTDPMLQVDLSRPRI 417
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.7 bits (113), Expect = 2e-06
Identities = 48/267 (17%), Positives = 78/267 (29%), Gaps = 87/267 (32%)
Query: 20 EKFGKS---ARNAIWLDSKLSSSFELY----QYLIRTKD----SEVYDLLKLFSFDSLAA 68
E+F K D + ++ EL Y+ + + +L L L
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNL----CLTE 90
Query: 69 IE-DFKRQNE-H---------KPEERRAQKKL------AEDLT-----------LLVHGE 100
E + N+ H K+L A + L
Sbjct: 91 FENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVG 150
Query: 101 EGLKSAKLAT---------------QALYS------QDL-----DSLGSL--NATDASRI 132
EG +A+L + LY DL ++L L DA ++
Sbjct: 151 EG--NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV 208
Query: 133 FP-GARIVELLMEPGM--SMLELSLATKCFPRDKEANLTISEGGFYVNYKKVQ--NPQEV 187
F G I+E L P L P + + + YV K+ P E+
Sbjct: 209 FTQGLNILEWLENPSNTPDKDYLLSIPISCPL-----IGVIQLAHYVVTAKLLGFTPGEL 263
Query: 188 LSPSAHILPNSLTLLRVEVSANIIAKS 214
S L + + V+A IA++
Sbjct: 264 RS----YLKGATGHSQGLVTAVAIAET 286
Score = 31.2 bits (70), Expect = 0.35
Identities = 44/290 (15%), Positives = 83/290 (28%), Gaps = 109/290 (37%)
Query: 22 FGKSARNAIWLDSKLSSSFELYQY----LIRTKDSEVYDLL-------KLFS--FDSLAA 68
FG + + +L ++ Y LI+ + +L+ K+F+ + L
Sbjct: 160 FGGQGNTDDYFE-ELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 69 IED------------------------------FKRQNEHKPEERRAQKKLAEDLTLLVH 98
+E+ + P E R+ K H
Sbjct: 219 LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLK-----GATGH 273
Query: 99 GEEGLKSAKLATQALYSQDLDSLGSLNATDASRI--FPGAR-------------IVELLM 143
+GL +A +A + +S + A + F G R I+E +
Sbjct: 274 S-QGLVTA-VAIAE--TDSWESFFV-SVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSL 328
Query: 144 EPGM----SML---ELSLAT---------KCFPRDKEANLTISEGGFYVNYKKVQNPQEV 187
E ML L+ P K+ +++ VN
Sbjct: 329 ENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISL------VN---------- 372
Query: 188 LSPSAHIL---PNSLTLLRVEVSANIIAKSANIIAK---SANIIAKSHRY 231
++ P SL L + + A S ++ S + S+R+
Sbjct: 373 -GAKNLVVSGPPQSLYGLNLTL-RKAKAPSGLDQSRIPFSERKLKFSNRF 420
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 45.2 bits (106), Expect = 1e-05
Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 64/235 (27%)
Query: 50 KDSEVYDLLKLFSFDSLAAI---EDFKRQNEHKPEERRAQKKLAEDLTLLVHGEEGLKS- 105
+ + D+ D +I E+ K + TLL EE ++
Sbjct: 31 DNFDCKDVQ-----DMPKSILSKEEIDHIIMSKDAVSGTLRLFW---TLLSKQEEMVQKF 82
Query: 106 -------------AKLATQ--------ALYSQDLDSLGSLNAT----DASRIFPGARIVE 140
+ + T+ +Y + D L + N + SR+ P ++ +
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142
Query: 141 LLME--P-------GM-----SMLELSLATKCFPRDKEANLTISEGGFYVNYKKVQNPQE 186
L+E P G+ + + L + + + F++N K +P+
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVC-----LSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 187 VLSP----SAHILPNSLTLLRVEVSANIIAKSANIIAKSANIIAKSHRY-DMYIV 236
VL I PN + R + S+NI + +I A+ ++ KS Y + +V
Sbjct: 198 VLEMLQKLLYQIDPNWTS--RSDHSSNIKLRIHSIQAELRRLL-KSKPYENCLLV 249
Score = 37.9 bits (87), Expect = 0.003
Identities = 42/236 (17%), Positives = 67/236 (28%), Gaps = 85/236 (36%)
Query: 30 IWLDSKLSSSFELY-QYLIRTKDSEVYDLLKLFSFDSLAAIEDFKRQNEHKPEERRAQKK 88
+ ++K ++F L + L+ T+ +V D L+A +H
Sbjct: 253 VQ-NAKAWNAFNLSCKILLTTRFKQV--------TDFLSAATTTHISLDHH------SMT 297
Query: 89 LAED--LTLLVHGEEGLKSAKLATQALYSQDLDSLGSLNATDASRIFPGARIVELLMEPG 146
L D +LL LK Q L + P
Sbjct: 298 LTPDEVKSLL------LKYLDCRPQDLPRE------------VLTTNP------RR---- 329
Query: 147 MSMLELSLATKCFPRDKEANLTISEGGFYVNYKK----------VQNPQE---------V 187
+S++ S+ RD L + +VN K V P E V
Sbjct: 330 LSIIAESI------RD---GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 188 LSPSAHILPNSLTLL----RVEVSANIIAKSANIIAKS-ANIIAKSHRY---DMYI 235
PSAHI L+L+ ++ K S K +Y+
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK---YSLVEKQPKESTISIPSIYL 433
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 35.3 bits (80), Expect = 0.006
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 20/47 (42%)
Query: 82 ERRAQKKLAEDLTLLVHGEEGLKSAKLATQALYSQD-LDSLGSLNAT 127
E++A KKL + LK LY+ D +L ++ AT
Sbjct: 18 EKQALKKL----------QASLK--------LYADDSAPAL-AIKAT 45
Score = 30.7 bits (68), Expect = 0.21
Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 27/50 (54%)
Query: 27 RNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDS---L---AAIE 70
+ A+ KL +S LKL++ DS L A +E
Sbjct: 19 KQAL---KKLQAS------------------LKLYADDSAPALAIKATME 47
Score = 26.1 bits (56), Expect = 7.5
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 10/33 (30%)
Query: 179 KKVQNPQEVLSP-SAHILPNSLTLLRVEVSANI 210
KK+Q ++ + SA P +L + A +
Sbjct: 23 KKLQASLKLYADDSA---P-ALA-----IKATM 46
>3chm_A COP9 signalosome complex subunit 7; heat/ARM repeats, winged helix
motif, developmental protein, phosphoprotein; 1.50A
{Arabidopsis thaliana}
Length = 169
Score = 29.9 bits (67), Expect = 0.52
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 44 QYLIRTKDSEVYDLLKLFSFDSLAAIEDFKRQNEHKPEERRAQKKLAEDLTLL 96
L T DS DLL+LF+ + D+K P Q + LT+L
Sbjct: 52 AQLEGTTDSVYLDLLRLFAHGTW---GDYKCNATRLPHLSPDQILKLKQLTVL 101
>3bbo_G Ribosomal protein L4; large ribosomal subunit, spinach chloroplast
ribosome, ribonucleoprotein particle, macromolecular
complex; 9.40A {Spinacea oleracea}
Length = 293
Score = 29.8 bits (67), Expect = 0.77
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 22/86 (25%)
Query: 13 IIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLK----LFSFDSLAA 68
+ E KS RN L L+ + ++D+L +F+ ++
Sbjct: 207 FFLMDLVENVEKSGRNIRTLK------------LLTPRSLNLFDVLNAEKLVFTEGTIQY 254
Query: 69 IED------FKRQNEHKPEERRAQKK 88
+ + ++E + EE ++
Sbjct: 255 LNQRYGVDTLEDEDEEEEEEEEGEEV 280
>3mko_A Glycoprotein C; trimeric coiled-coil, viral protein; 1.80A
{Lymphocytic choriomeningitis virus}
Length = 137
Score = 27.6 bits (61), Expect = 1.9
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 43 YQYLIRTKDSEVYDLLKLFSFDSLAAIEDFKRQNEHK 79
+ + I +D E D+L+L ++ AA+ FK+ E
Sbjct: 3 HHHHIEGRDEEFSDMLRLIDYNK-AALSKFKQDVESA 38
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH)
domain, phosphotyrosine-binding (PTB) domain, protein
transport; NMR {Homo sapiens} SCOP: b.55.1.3
Length = 130
Score = 27.3 bits (60), Expect = 2.4
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 1 MEVTGDGGLTTPIIESESGEKFGKSARNAIWL-DSKLSSSFELYQYLIRTKDSEVYDLLK 59
E I + + + S R +WL +L Q + K E+ + K
Sbjct: 52 REQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFK 111
Query: 60 LFSFDSLAAIEDFKRQNEHKPEE 82
E+ +R P +
Sbjct: 112 -------QKFEECQRLLLDIPLQ 127
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 27.8 bits (61), Expect = 2.4
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 19/78 (24%)
Query: 15 ESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLKLFSFDSLAAIEDF-K 73
E ES K W E + ++ D+ + + + + +E++ +
Sbjct: 83 EPESIRK---------WR--------EEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQ 125
Query: 74 RQNEHKPEERRAQKKLAE 91
RQ+E E+ + ++A+
Sbjct: 126 RQSEQV-EKNKINNRIAD 142
>3r8s_E 50S ribosomal protein L4; protein biosynthesis, RNA, tRNA, transfer
RNA, 23S ribosomal subunit, ribosome recycling factor,
RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_C
1p86_C 1vs8_E 1vs6_E 2aw4_E 2awb_E 1vt2_E 2i2v_E 2j28_E
2i2t_E* 2qao_E* 2qba_E* 2qbc_E* 2qbe_E 2qbg_E 2qbi_E*
2qbk_E* 2qov_E 2qox_E 2qoz_E* ...
Length = 201
Score = 28.0 bits (63), Expect = 2.6
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 16/63 (25%)
Query: 13 IIESESGEKFGKSARNAIWLDSKLSSSFELYQYLIRTKDSEVYDLLK----LFSFDSLAA 68
II E E +ARN +D + + L+ + + D++
Sbjct: 148 IITGELDENLFLAARNLHKVD------------VRDATGIDPVSLIAFDKVVMTADAVKQ 195
Query: 69 IED 71
+E+
Sbjct: 196 VEE 198
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.131 0.356
Gapped
Lambda K H
0.267 0.0606 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,394,025
Number of extensions: 189779
Number of successful extensions: 331
Number of sequences better than 10.0: 1
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 29
Length of query: 241
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 150
Effective length of database: 4,160,982
Effective search space: 624147300
Effective search space used: 624147300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (25.6 bits)