BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9394
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4G2A7|GCP_HERAR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Herminiimonas arsenicoxydans GN=gcp PE=3 SV=1
Length = 342
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/340 (60%), Positives = 271/340 (79%), Gaps = 2/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ IPLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALYSQVKMHEEYGGVVPELASRDHIRRAIPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++ S + ID IAYT+GPGL G+LLVG+S+AC + L+++KPV+GI+HLEGHLLSP
Sbjct: 60 EQVFSESGVAHGAIDAIAYTQGPGLAGALLVGASVACGLGLALDKPVLGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L++ FPFIALLVSGGHTQL++V+ IG Y +LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLASEPPEFPFIALLVSGGHTQLMRVDGIGQYTMLGETLDDAAGEAFDKSAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GP IS ++EFGDP YK PRPML++ N +FSFSGLKT+VL V+KN + +++KANIAR
Sbjct: 180 GPAISRMAEFGDPTAYKLPRPMLHSKNLDFSFSGLKTAVLTVVKNQTTNICEQDKANIAR 239
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F+DAI++VLT KC+ ALK+TG+ +LV+ GGVGAN+QLR+ LN + ++ VFYP+ EF
Sbjct: 240 AFVDAIVEVLTAKCVTALKHTGLKRLVIAGGVGANQQLRESLNAAAAKKHFKVFYPELEF 299
Query: 301 CTDNGAMIAFAGAMRIE-NNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGAMR++ N ++ +Y FN+KP+W ++ I
Sbjct: 300 CTDNGAMIAFAGAMRLQINPDAAKKDYAFNVKPRWPLDSI 339
>sp|Q1LK37|GCP_RALME Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=gcp PE=3 SV=2
Length = 346
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/340 (55%), Positives = 260/340 (76%), Gaps = 3/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT L +H + SQ +H+EYGGVVPELA+R HI+ ++PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-AGLLAHALHSQIAMHREYGGVVPELASRDHIRRVLPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L ++ ID IAYT+GPGL G+LLVG+S+A ++ ++ P+IG++HLEGHLLSP
Sbjct: 60 QQVLDDAGRTRADIDAIAYTQGPGLAGALLVGASVANALGFALGVPMIGVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L++ FPF+ALLVSGGHTQL++V IG+Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLTSAPPPFPFVALLVSGGHTQLMEVKGIGDYKLLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GPE+S ++EFG+P ++ PRPML++ N +FSF+GLKT+VL + + ++ ++++AN+AR
Sbjct: 180 GPEVSRLAEFGNPGAFELPRPMLHSGNLDFSFAGLKTAVLTQTRKLS-NACEQDRANLAR 238
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F+DAI+DVL K AALK TG +LVV GGVGAN+QLR++LN + K+ VFYP F
Sbjct: 239 AFVDAIVDVLAAKSFAALKQTGDKRLVVAGGVGANRQLRERLNEMGKRRKVEVFYPDLAF 298
Query: 301 CTDNGAMIAFAGAMRIENNYK-SESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGAMR++ + + Y++ + P+W + I
Sbjct: 299 CTDNGAMIAFAGAMRLKAAPELARHGYDYGVTPRWDLADI 338
>sp|Q8XX97|GCP_RALSO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ralstonia solanacearum (strain GMI1000) GN=gcp PE=3
SV=1
Length = 347
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 261/343 (76%), Gaps = 5/343 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++G+ALYDT LR+H + SQ +H++YGGVVPELA+R HI+ +IPLL
Sbjct: 1 MLVLGIESSCDETGVALYDTD-AGLRAHALYSQIAMHRDYGGVVPELASRDHIRRVIPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+L + + ID IAYT+GPGL G+LLVG+S+A ++ ++ KP++G++HLEGHLLSP
Sbjct: 60 EDVLAEAGVGRADIDAIAYTKGPGLAGALLVGASVANALGFALGKPLVGVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V+++G Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLEADRPAFPFLALLVSGGHTQLMRVDAVGQYTLLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLD---SLKKEKAN 237
GP +S ++EFG+P ++ PRPML++ NF+FSF+GLKT+VL ++ + LD + ++ +A+
Sbjct: 180 GPAVSRLAEFGNPGAFELPRPMLHSGNFDFSFAGLKTAVLTQVRKLNLDGGEACEQPRAD 239
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+AR F+DAI+DVL K + A + G+ ++VV GGVGAN+QLR++LN + V+YP
Sbjct: 240 LARAFVDAIVDVLVAKTLRAAREHGLKRIVVAGGVGANRQLRERLNAEGGKRGLRVYYPD 299
Query: 298 KEFCTDNGAMIAFAGAMRIENN-YKSESNYEFNIKPQWKINKI 339
+FCTDNGAMIAFAGAMR++ + + +S Y + + P+W + I
Sbjct: 300 LQFCTDNGAMIAFAGAMRLQADPGQVQSGYGYGVTPRWDLEDI 342
>sp|Q474C0|GCP_CUPPJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197)
GN=gcp PE=3 SV=1
Length = 344
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/340 (55%), Positives = 256/340 (75%), Gaps = 3/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT L SH + SQ +H++YGGVVPELA+R HI+ ++PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-AGLLSHALHSQIAMHRDYGGVVPELASRDHIRRVLPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L + ID IA+T+GPGL G+LLVG+S+A ++ ++N P++G++HLEGHLLSP
Sbjct: 60 QQVLDEAGRSRADIDAIAFTQGPGLAGALLVGASVANALGFALNVPMVGVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L+ FPFIALLVSGGHTQL++V IG+Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLTREPPPFPFIALLVSGGHTQLMEVKGIGDYTLLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GPE+S ++EFG P + PRPML++ N +FSF+GLKT+VL + + ++ ++++AN+AR
Sbjct: 180 GPEVSRLAEFGTPGAFDLPRPMLHSGNLDFSFAGLKTAVLTQTRKLA-NTCEQDRANLAR 238
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F+DAI+DVL K AALK TG +LVV GGVGAN+QLR++LN L KQ V+YP F
Sbjct: 239 AFVDAIVDVLAAKSFAALKQTGHKRLVVAGGVGANRQLRERLNQLGKQRKIDVYYPDLAF 298
Query: 301 CTDNGAMIAFAGAMRIENNYK-SESNYEFNIKPQWKINKI 339
CTDNGAMIA AGAMR++ ++ +Y + + P+W + I
Sbjct: 299 CTDNGAMIALAGAMRLQAAPDLAQHSYGYGVTPRWDLADI 338
>sp|B2U928|GCP_RALPJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ralstonia pickettii (strain 12J) GN=gcp PE=3 SV=1
Length = 347
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 182/343 (53%), Positives = 260/343 (75%), Gaps = 5/343 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++G+ALYDTH LR+H + SQ +H+EYGGVVPELA+R HI+ +IPLL
Sbjct: 1 MLVLGIESSCDETGVALYDTH-SGLRAHALYSQIAMHREYGGVVPELASRDHIRRVIPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L + ID IAYT+GPGL G+LLVG+S+A ++A ++ KP++ ++HLEGHLLSP
Sbjct: 60 EEVLGKAGATRADIDAIAYTKGPGLAGALLVGASVANALAFALGKPLVAVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V+++G Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLEADRPEFPFLALLVSGGHTQLMRVDAVGQYTLLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL---DSLKKEKAN 237
GP +S ++EFG+P ++ PRPML++ NF+FSF+GLKT+VL ++ + L ++ + +A+
Sbjct: 180 GPAVSRLAEFGNPGVFDLPRPMLHSGNFDFSFAGLKTAVLTQVRKLNLTDSETCYQPRAD 239
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+AR F+DAI++VL K + A + G+ ++VV GGVGAN+QLR+ LN K+ V+YP
Sbjct: 240 LARAFVDAIVEVLVKKTLRAAREHGLKRIVVAGGVGANRQLREGLNAEGKKRGLRVYYPD 299
Query: 298 KEFCTDNGAMIAFAGAMRIENN-YKSESNYEFNIKPQWKINKI 339
+FCTDNGAMIAFAGAMR++ + + + Y + + P+W + I
Sbjct: 300 LQFCTDNGAMIAFAGAMRLQADPAQVQDGYGYGVTPRWDLEDI 342
>sp|B3R5H2|GCP_CUPTR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
GN=gcp PE=3 SV=1
Length = 344
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 260/340 (76%), Gaps = 3/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT L +H + SQ +H++YGGVVPELA+R HI+ ++PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTG-AGLLAHALHSQIAMHRDYGGVVPELASRDHIRRVLPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L ++ + ID IA+T+GPGL G+LLVG+S+A ++ ++N P++G++HLEGHLLSP
Sbjct: 60 EQVLADAGRTRQDIDAIAFTQGPGLAGALLVGASVANALGFALNVPMVGVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L+ FPF+ALLVSGGHTQL++V IG+Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLTREPPPFPFVALLVSGGHTQLMEVRGIGDYALLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GPE+S ++EFG P ++ PRPML++ N +FSF+GLKT+VL + + ++ ++++AN+AR
Sbjct: 180 GPEVSRLAEFGVPGAFELPRPMLHSGNLDFSFAGLKTAVLTQTRKLA-NTCEQDRANLAR 238
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F+DAI+DVL K +AAL+ TG +LVV GGVGAN+QLR++L+ L +Q V+YP F
Sbjct: 239 AFVDAIVDVLVAKSMAALRQTGHKRLVVAGGVGANRQLRERLDQLGRQRKLDVYYPDLAF 298
Query: 301 CTDNGAMIAFAGAMRIENNYK-SESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGAMR++ + + Y + + P+W + I
Sbjct: 299 CTDNGAMIAFAGAMRLQAAPELARREYGYGVTPRWDLADI 338
>sp|Q0K862|GCP_CUPNH Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=gcp PE=3 SV=1
Length = 344
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/340 (54%), Positives = 259/340 (76%), Gaps = 3/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT L +H + SQ +H++YGGVVPELA+R HI+ ++PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTG-AGLLAHALHSQIAMHRDYGGVVPELASRDHIRRVLPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L ++ + ID IA+T+GPGL G+LLVG+S+A ++ ++N P++G++HLEGHLLSP
Sbjct: 60 EQVLADAGRTRQDIDAIAFTQGPGLAGALLVGASVANALGFALNVPMVGVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L+ FPF+ALLVSGGHTQL++V IG+Y LLGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLTREPPPFPFVALLVSGGHTQLMEVRGIGDYTLLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GPE+S ++EFG P + PRPML++ N +FSF+GLKT+VL + + ++ ++++AN+AR
Sbjct: 180 GPEVSRLAEFGIPGAFALPRPMLHSGNLDFSFAGLKTAVLTQTRKLA-NTCEQDRANLAR 238
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F+DAI+DVL K +AALK TG +LVV GGVGAN+QLR++L+ + KQ V+YP F
Sbjct: 239 AFVDAIVDVLAAKSMAALKQTGHKRLVVAGGVGANRQLRERLDQMGKQRKIDVYYPDLAF 298
Query: 301 CTDNGAMIAFAGAMRIENNYK-SESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGAMR++ + + Y + + P+W + I
Sbjct: 299 CTDNGAMIAFAGAMRLQAAPELARHEYGYGVTPRWDLADI 338
>sp|B2JP66|GCP_BURP8 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=gcp PE=3 SV=1
Length = 341
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 253/340 (74%), Gaps = 2/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L+ S ID IAYT+GPGL G+LLVG+SIA S+A++ NKP IGI+HLEGHLLSP
Sbjct: 60 EEVLERSGAARGDIDAIAYTQGPGLAGALLVGASIANSLAMAWNKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVDEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GPE+S ++EFG P PRPML++ + +FSFSGLKT+VL +K + + ++ KA++AR
Sbjct: 180 GPEVSRLAEFGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTHVKKLGGNVCEQAKADLAR 239
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
GF+DA ++VL K +AALK T + +LVV GGVGAN+QLR+ L+ ++ + V YP
Sbjct: 240 GFVDAAVEVLAVKSLAALKKTKLKRLVVAGGVGANRQLREALSSAAQKRGFAVHYPDLSL 299
Query: 301 CTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGA+R++ ++ +Y F +KP+W + +
Sbjct: 300 CTDNGAMIALAGALRMQRWPAQATDDYAFTVKPRWDLGSL 339
>sp|Q13RW9|GCP_BURXL Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia xenovorans (strain LB400) GN=gcp PE=3
SV=1
Length = 342
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/341 (54%), Positives = 256/341 (75%), Gaps = 3/341 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++++ + ID IAYT+GPGL G+LLVG+S+A ++A++ +KP IGI+HLEGHLLSP
Sbjct: 60 EEVMERAGTAAGDIDAIAYTQGPGLAGALLVGASVANALAMAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVDEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSL-KKEKANIA 239
GPE+S ++EFG P PRPML++ + +FSFSGLKT+VL K + ++ ++ KA++A
Sbjct: 180 GPEVSRMAEFGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTHAKKLGGANICEQAKADLA 239
Query: 240 RGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKE 299
RGF+DA ++VL K +AALK TG+N+LVV GGVGAN+QLR+ L+ K+ N+ V YP
Sbjct: 240 RGFVDAAVEVLAAKSLAALKKTGLNRLVVAGGVGANRQLREALSAAAKKRNFYVHYPDLS 299
Query: 300 FCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGA+R++ +S +Y F +KP+W + +
Sbjct: 300 LCTDNGAMIALAGALRLQRWPDQSGKDYAFTVKPRWDLTSL 340
>sp|Q1GYU4|GCP_METFK Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=gcp PE=3 SV=1
Length = 339
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/340 (55%), Positives = 258/340 (75%), Gaps = 5/340 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M+ILGIESSCD++GLALYDT + L +H + SQ +H YGGVVPELA+R HI+ +PL
Sbjct: 1 MLILGIESSCDETGLALYDTE-RGLLAHALHSQIDMHAAYGGVVPELASRDHIRRTLPLT 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+L+ + L +D IAYT+GPGL G+LLVG+SIA S+A S++ P IG++HLEGHLL+P
Sbjct: 60 QHVLEQAGKSLADLDGIAYTQGPGLSGALLVGTSIAESLAFSLDLPTIGVHHLEGHLLAP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V++IG+Y LLG+TLDDAAG+ FDK AK+L L YPG
Sbjct: 120 LLEPDPPAFPFVALLVSGGHTQLMRVSAIGDYELLGDTLDDAAGEAFDKTAKLLGLSYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKK-EKANIA 239
GP +S ++ G P + PRPML + + NFSFSGLKT+VL ++ N D+L + +ANIA
Sbjct: 180 GPAVSRLANQGQPGACQLPRPMLNSGDLNFSFSGLKTAVLTLV-NQYGDALDETARANIA 238
Query: 240 RGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKE 299
F +A+ +VLT KC+AAL+NTG+N+L+V GGVGAN +LR++LN+ K+ Y V YP+ E
Sbjct: 239 YEFQEAVTEVLTKKCMAALRNTGLNQLIVSGGVGANARLRERLNMAAKRRQYQVHYPRLE 298
Query: 300 FCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
FCTDNGAMIAFAGAMR++ + + N+ F ++P+W + ++
Sbjct: 299 FCTDNGAMIAFAGAMRMQ--HAKQGNHSFTVRPRWDLAEL 336
>sp|Q47IP4|GCP_DECAR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Dechloromonas aromatica (strain RCB) GN=gcp PE=3 SV=2
Length = 344
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 255/340 (75%), Gaps = 3/340 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M+ILG+ESSCD++G+ALYD+ L SH + SQ +H EYGGVVPELA+R HI+ ++PLL
Sbjct: 1 MLILGVESSCDETGIALYDSE-AGLLSHALYSQVAMHAEYGGVVPELASRDHIRRVVPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+ L + L ++D +AYTRGPGL G+LLVG + A ++AL+I+KP I ++HLEGHLLSP
Sbjct: 60 REALGQAGKMLDEVDAVAYTRGPGLAGALLVGCAFAEALALAIDKPTIPVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
LS++ TFPF+ALLVSGGHTQL+KV +G Y LLGETLDDAAG+ FDK AK+L L YPG
Sbjct: 120 LLSSDPPTFPFVALLVSGGHTQLMKVTGVGEYELLGETLDDAAGEAFDKSAKLLGLPYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKE-KANIA 239
G +S ++E G P +++ PRPML++ + +FSFSGLKT+VL +++ D++ E KAN A
Sbjct: 180 GALLSKLAEQGTPGVHELPRPMLHSGDLSFSFSGLKTAVLTLVRE-HADAMSDEFKANAA 238
Query: 240 RGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKE 299
R F +AI++VL K + A+K TG+ +LVV GGVGANKQLR LN K+ + V+YP+ E
Sbjct: 239 RAFQEAIVEVLVKKSLKAMKQTGLKQLVVAGGVGANKQLRTTLNDEAKRKRFRVYYPELE 298
Query: 300 FCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
FCTDNGAMIA AG +R+++ S++ F ++P+W + ++
Sbjct: 299 FCTDNGAMIALAGCLRLQSGSPSKAAGSFAVQPRWPLMEM 338
>sp|Q62DT7|GCP_BURMA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia mallei (strain ATCC 23344) GN=gcp PE=3
SV=1
Length = 346
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 249/345 (72%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L S ID IA+T+GPGL G+LLVG+SIA ++A + +KP IGI+HLEGHLLSP
Sbjct: 60 EEVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V+ +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDS-----LKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K ++ L++ K
Sbjct: 180 GPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ ++ + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ +Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASL 344
>sp|Q3JKA5|GCP_BURP1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia pseudomallei (strain 1710b) GN=gcp PE=3
SV=2
Length = 346
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 248/345 (71%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L S ID IA+T+GPGL G+LLVG+SIA ++A + +KP IGI+HLEGHLLSP
Sbjct: 60 EEVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V+ +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDS-----LKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K ++ L++ K
Sbjct: 180 GPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A+ ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ ++ + V Y
Sbjct: 240 ADFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ +Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASL 344
>sp|A3P7W1|GCP_BURP0 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia pseudomallei (strain 1106a) GN=gcp PE=3
SV=2
Length = 346
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 248/345 (71%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L S ID IA+T+GPGL G+LLVG+SIA ++A + +KP IGI+HLEGHLLSP
Sbjct: 60 EEVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V+ +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDS-----LKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K ++ L++ K
Sbjct: 180 GPEVSRLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A+ ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ ++ + V Y
Sbjct: 240 ADFARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ +Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASL 344
>sp|Q63JF6|GCP_BURPS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia pseudomallei (strain K96243) GN=gcp PE=3
SV=1
Length = 346
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/345 (53%), Positives = 249/345 (72%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTE-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L S ID IA+T+GPGL G+LLVG+SIA ++A + +KP IGI+HLEGHLLSP
Sbjct: 60 EEVLAASGARRDDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V+ +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVSDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDS-----LKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K ++ L++ K
Sbjct: 180 GPEVSRLAEAGTPGAVVLPRPMLHSVDLDFSFSGLKTAVLTQMKKLEAAHAGGAVLERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ ++ + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKATRLKRLVVAGGVGANRQLRAALSAAAQKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ +Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASL 344
>sp|Q0BAL6|GCP_BURCM Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=gcp PE=3 SV=1
Length = 346
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 252/345 (73%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPFIALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDEPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI---KLD--SLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K KLD +L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLDGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|A4JLT6|GCP_BURVG Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=gcp PE=3 SV=1
Length = 346
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/345 (54%), Positives = 251/345 (72%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP IGI+HLEGHLLSP
Sbjct: 60 DEVMIQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPFIALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDAPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL-----DSLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K + D+L++ K
Sbjct: 180 GPEVSRLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLEGDALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANTDYAFTVKPRWDLASL 344
>sp|B1Z1G4|GCP_BURA4 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia ambifaria (strain MC40-6) GN=gcp PE=3
SV=1
Length = 346
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 252/345 (73%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPFIALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDEPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI---KLDS--LKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K KL+S L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLESEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|Q393P6|GCP_BURS3 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia sp. (strain 383) GN=gcp PE=3 SV=1
Length = 346
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 251/345 (72%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTRRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDQPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL-----DSLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K + ++L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLEGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|A0AYZ2|GCP_BURCH Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia cenocepacia (strain HI2424) GN=gcp PE=3
SV=1
Length = 346
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 252/345 (73%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H++YGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHRDYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTRRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI---KLD--SLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K KLD +L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLDGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|B1K3S7|GCP_BURCC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia cenocepacia (strain MC0-3) GN=gcp PE=3
SV=1
Length = 346
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 252/345 (73%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H++YGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHRDYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTRRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI---KLD--SLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K KLD +L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLDGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|Q1BLY9|GCP_BURCA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia cenocepacia (strain AU 1054) GN=gcp PE=3
SV=1
Length = 346
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 252/345 (73%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H++YGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHRDYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTRRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI---KLD--SLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K KLD +L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLDGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|Q2T7N3|GCP_BURTA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=gcp PE=3 SV=1
Length = 346
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/345 (53%), Positives = 246/345 (71%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H+EYGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTG-RGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++L + ID IA+T+GPGL G+LLVG+SIA ++A + +KP IGI+HLEGHLLSP
Sbjct: 60 EEVLAAGGARREDIDAIAFTQGPGLAGALLVGASIANALAFAWDKPTIGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL-----DSLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K ++ L + K
Sbjct: 180 GPEVSKLAEAGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKLEAAHASGAELDRAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTRLKRLVVAGGVGANRQLRAALSAAAGKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ +Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLARWPSQASRDYAFTVKPRWDLASL 344
>sp|A9ANA0|GCP_BURM1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=gcp PE=3 SV=1
Length = 346
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 250/346 (72%), Gaps = 9/346 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H++YGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHRDYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S + ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVIAKSGARREDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVAEPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL-----DSLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K + D+L + K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAQLSGDALARAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIENNYKSESN--YEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ + ++N Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLA-RWPEQANVDYAFTVKPRWDLASL 344
>sp|B4EN31|GCP_BURCJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Burkholderia cepacia (strain J2315 / LMG 16656)
GN=gcp PE=3 SV=1
Length = 346
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/345 (53%), Positives = 251/345 (72%), Gaps = 7/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++GLALYDT + L +H + SQ +H++YGGVVPELA+R HI+ +PLL
Sbjct: 1 MLVLGIESSCDETGLALYDTQ-RGLLAHALHSQIAMHRDYGGVVPELASRDHIRRALPLL 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++ S ID IA+T+GPGL G+LLVG+SIA ++AL+ NKP +GI+HLEGHLLSP
Sbjct: 60 EEVMAQSGTRRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L + FPF+ALLVSGGHTQL++V +G Y LGETLDDAAG+ FDK AK++ LGYPG
Sbjct: 120 LLVDAPPPFPFVALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKL-----DSLKKEK 235
GPE+S ++E G P PRPML++ + +FSFSGLKT+VL +K + ++L++ K
Sbjct: 180 GPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKFDGEALERAK 239
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
A++ARGF+DA +DVL K +AALK T + +LVV GGVGAN+QLR L+ + + V Y
Sbjct: 240 ADLARGFVDAAVDVLVAKSLAALKKTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHY 299
Query: 296 PKKEFCTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIA AGA+R+ ++ ++Y F +KP+W + +
Sbjct: 300 PDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASL 344
>sp|Q2Y7B6|GCP_NITMU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=gcp PE=3 SV=1
Length = 347
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 252/343 (73%), Gaps = 10/343 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIE+SCD++G+ALY T + L SH + SQ +H EYGGVVPELA+R HI+ ++PL+
Sbjct: 1 MLVLGIETSCDETGVALYHTQ-QGLLSHALYSQIEMHGEYGGVVPELASRDHIRRLLPLI 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
++ + + L+ +D IAYT+GPGL G+LLVG+S+A ++ ++ PV+GI+HLEGHLLSP
Sbjct: 60 RQIFAEAGVSLRDLDAIAYTQGPGLAGALLVGASVAAALGFALKVPVLGIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
LS+ + FPF+ALLVSGGHTQL++V +G Y LLGET+DDAAG+ FDK AK+L LGYPG
Sbjct: 120 LLSDPAPAFPFVALLVSGGHTQLMEVTGLGQYRLLGETVDDAAGEAFDKTAKLLGLGYPG 179
Query: 181 GPEIS-LISEF---GDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKA 236
GP +S L EF G ++ PRPML++ +FNFSFSGLKT+VL ++ K + + +
Sbjct: 180 GPALSRLADEFTRSGQSARFELPRPMLHSGDFNFSFSGLKTAVLTLVN--KHEMTPQIRG 237
Query: 237 NIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYP 296
IA+ F +A ++VLT K +AAL TG+ +LVV GGVGAN+QLR L+ TV+YP
Sbjct: 238 AIAQAFQEAAVEVLTEKSLAALAKTGLTQLVVAGGVGANRQLRSNLDRRAGTIGATVYYP 297
Query: 297 KKEFCTDNGAMIAFAGAMRIENNYKSESNY--EFNIKPQWKIN 337
K EFCTDNGAMIAFAGAMR+E+ +SES+ +F I +W +
Sbjct: 298 KLEFCTDNGAMIAFAGAMRLESG-ESESSRLGKFTINARWDLE 339
>sp|A1VM52|GCP_POLNA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Polaromonas naphthalenivorans (strain CJ2) GN=gcp
PE=3 SV=1
Length = 356
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/345 (50%), Positives = 247/345 (71%), Gaps = 8/345 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M++LGIESSCD++G+AL DT L +H + SQ +H+ YGGVVPELA+R HI+ ++
Sbjct: 1 MLVLGIESSCDETGVALVDTSASPTPCLLAHALYSQIAMHQPYGGVVPELASRDHIRRVL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL ++K++ L +D+IAYTRGPGL G+LLVG+ +ACS+A ++ KP +G++HLEGHL
Sbjct: 61 PLTQDVMKSAQHTLADVDVIAYTRGPGLAGALLVGAGVACSLAAALGKPAMGVHHLEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSPFLS + FPF+ALLVSGGHTQL++V+ +G+Y LLGET+DDAAG+ FDK AK++ +
Sbjct: 121 LSPFLSADPPEFPFVALLVSGGHTQLMRVDRVGSYELLGETIDDAAGEAFDKSAKLMGMP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP ++ ++ GD +K PRP+L++ N +FSF+GLKT+VL K + + L+ KA+
Sbjct: 181 YPGGPHLARLALGGDGAAFKLPRPLLHSGNLDFSFAGLKTAVLTQAKKLGTE-LESRKAD 239
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+A AI++VL K +AAL T + +LVV GGVGAN LR +LN +Q V YP+
Sbjct: 240 LAASTQAAIVEVLVKKTLAALSQTALKRLVVAGGVGANALLRSQLNAACQQRGIRVHYPE 299
Query: 298 KEFCTDNGAMIAFAGAMRIE----NNYKSESNYEFNIKPQWKINK 338
EFCTDNGAMIA A MR++ N +Y F++KP+W +++
Sbjct: 300 LEFCTDNGAMIAMAAGMRLQAGLVNLDALRGSYTFDVKPRWNLSE 344
>sp|Q7NUE3|GCP_CHRVO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=gcp PE=3 SV=1
Length = 341
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/344 (51%), Positives = 246/344 (71%), Gaps = 11/344 (3%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIESSCD++G+ALYDT + L +H + +Q +H EYGGVVPELA+R HI+ IPL
Sbjct: 1 MLVLGIESSCDETGVALYDTE-RGLLAHQLHTQMAMHAEYGGVVPELASRDHIRRAIPLT 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
L + +L +D IAYT+GPGL G+L+VG+S+A ++A +N PVI ++HLEGHLLSP
Sbjct: 60 EACLSEAGKKLADLDAIAYTQGPGLGGALMVGASMANALAFGLNIPVIPVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L++ FPF+ALLVSGGHTQL+ V +G+Y +LGET+DDAAG+ FDK AK+L L YPG
Sbjct: 120 LLADPKPEFPFLALLVSGGHTQLMAVRGVGDYEILGETVDDAAGEAFDKTAKLLGLPYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNI-----KLDSLKKEK 235
GP +S ++E G P+ + PRPML++ N + SFSGLKT+VL +++ +LD ++ +
Sbjct: 180 GPLLSRLAESGSPDRFTLPRPMLHSGNLDMSFSGLKTAVLTLVRQQESAQGELD--EQTR 237
Query: 236 ANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295
+I R F +AI++VL K +AA++ G+ +LVV GGVGANKQLR LN + + VFY
Sbjct: 238 MDICRAFQEAIVEVLVKKSLAAMRQAGMKRLVVAGGVGANKQLRAALNDAAARKRFDVFY 297
Query: 296 PKKEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
P CTDNGAMIAFAGAMR++ +E F IKP+W ++ +
Sbjct: 298 PPLALCTDNGAMIAFAGAMRLKF---AEPAGGFTIKPRWDLSSL 338
>sp|C5CT30|GCP_VARPS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Variovorax paradoxus (strain S110) GN=gcp PE=3 SV=1
Length = 352
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 250/343 (72%), Gaps = 5/343 (1%)
Query: 1 MIILGIESSCDDSGLALYDTH---IKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M++LGIESSCD++G+AL +TH + LRSH + SQ +H+ YGGVVPELA+R HI+ ++
Sbjct: 1 MLLLGIESSCDETGVALVETHGSALPQLRSHALHSQIAMHQAYGGVVPELASRDHIRRVL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL ++ + L +ID++AYTRGPGL G+LLVG+ +AC++ ++ KPV+G++HLEGHL
Sbjct: 61 PLTEAVMAEAGRSLAEIDVVAYTRGPGLAGALLVGAGVACALGAALGKPVLGVHHLEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSPFLS + FPF+ALLVSGGHTQL++V+ +G Y LLGET+DDAAG+ FDK AK++ L
Sbjct: 121 LSPFLSADPPEFPFVALLVSGGHTQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP ++ ++E G+P +K PRP+L++ + +FSF+GLKT+VL K + + L+ KA+
Sbjct: 181 YPGGPWLAKLAEAGNPAAFKLPRPLLHSGDLDFSFAGLKTAVLTQAKKLGAE-LEANKAD 239
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+A AI++VL K +AAL TG+ +LVV GGVGAN+ LR++LN + V YP+
Sbjct: 240 LAASTQAAIVEVLLKKSLAALGQTGLKRLVVAGGVGANRSLREQLNAACAKRGVRVHYPE 299
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESN-YEFNIKPQWKINKI 339
CTDNGAMIA A AMR+++ S Y F++KP+W + +
Sbjct: 300 LHLCTDNGAMIAMAAAMRLQSGLAEASERYAFDVKPRWPMASL 342
>sp|B4SHI9|GCP_STRM5 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcp
PE=3 SV=1
Length = 341
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 242/342 (70%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MRVLGIESSCDETGVAVYDTDLAGSAALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ID +AYT GPGL G+LLVG+ +A S+A ++ P +G++H+EGHL
Sbjct: 61 PLVRQTLAEAGLGVGDIDGVAYTAGPGLVGALLVGAGVARSLAWALEVPAVGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V++IG Y LLGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQAPFVALLVSGGHTQLVAVDAIGQYRLLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P +Y+F RPM+ +FSFSGLKT VL ++ D ++ +A+
Sbjct: 181 YPGGPQLARLAEQGTPGVYRFARPMIDRPGLDFSFSGLKTQVLMAWRDS--DQSEQTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L+ KC AL+ G N +VV GGVGANK+LR +L + ++ +P+
Sbjct: 239 IARGFEDAVVETLSIKCERALEAAGTNVIVVAGGVGANKRLRARLQQMAERLGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ S + ++ P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAGQHSPP--KVDVTPRWDMATL 338
>sp|C1DB12|GCP_LARHH Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Laribacter hongkongensis (strain HLHK9) GN=gcp PE=3
SV=1
Length = 345
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/342 (51%), Positives = 242/342 (70%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LG ESSCD++G+ALYDT + L +H + +Q +H EYGGVVPELA+R HI+ IIPL
Sbjct: 1 MLVLGFESSCDETGVALYDTE-RGLVAHALHTQMAMHAEYGGVVPELASRDHIRRIIPLT 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
L L +D IA+T+GPGL G+LLVG+S+A ++A ++ PVI ++HLEGHLLSP
Sbjct: 60 QACLAEGGKTLADLDAIAFTQGPGLGGALLVGASVANALAFGLDIPVIDVHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L++ + FPF+ALLVSGGHTQL+ V+ +G Y LGETLDDAAG+ FDK AK+L L YPG
Sbjct: 120 MLADPAPAFPFVALLVSGGHTQLMAVHGVGQYETLGETLDDAAGEAFDKTAKLLGLPYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSL---KKEKAN 237
GP +S ++E GDP + PRPML + + + SFSGLKT+VL + ++ D ++ +A+
Sbjct: 180 GPLLSRLAESGDPARFTLPRPMLNSADLDMSFSGLKTAVLTLKTRVEADLGPIDEQTRAD 239
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
I R F ++I++VL K + ALK TG+ +LVV GGVGAN+QLR L+ + VFYP
Sbjct: 240 ICRAFQESIVEVLVKKSLGALKRTGLKRLVVAGGVGANRQLRAALDAACARRRVEVFYPP 299
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGAMR++ + + S F+IKP+W ++ +
Sbjct: 300 LSLCTDNGAMIALAGAMRLKQAHAAGS---FSIKPRWDLSSL 338
>sp|Q8PFV1|GCP_XANAC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xanthomonas axonopodis pv. citri (strain 306) GN=gcp
PE=3 SV=1
Length = 352
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 240/342 (70%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKVLGIESSCDETGVAVYDTELSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ++D +AYT GPGL G+LLVG+ +A S+A +++ P IG++H+EGHL
Sbjct: 61 PLIRQTLGEAGLRIDELDGVAYTAGPGLVGALLVGAGVARSLAWALDVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V ++G+Y +LGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQAPFVALLVSGGHTQLVSVKALGSYQVLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P YKF RPM +FSFSGLKT VL ++ D +A+
Sbjct: 181 YPGGPQLAALAETGTPGRYKFARPMTDRPGLDFSFSGLKTQVLLAWRSS--DQSDTTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA++D L KC+ AL G + LVV GGVGANK+LR +L ++ V +P+
Sbjct: 239 IARGFEDAVVDTLAIKCLRALDAAGCDTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ +++ ++ P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAGEHADAA--VHVTPRWDMAAL 338
>sp|A1KAI4|GCP_AZOSB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Azoarcus sp. (strain BH72) GN=gcp PE=3 SV=1
Length = 343
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/339 (50%), Positives = 242/339 (71%), Gaps = 2/339 (0%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M +LGIE+SCD++G+A+YD ++ L H + SQ +H YGGVVPELA+R HI+ + LL
Sbjct: 1 MKVLGIETSCDETGVAIYDGSVRRLLGHCLHSQIDLHAAYGGVVPELASRDHIRRLPLLL 60
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+L + L + ID +AYT GPGL G+LL G+S A + AL+ P + I+HLEGHLLSP
Sbjct: 61 KQLFGETGLSRRDIDAVAYTAGPGLAGALLTGASFAEAFALAAGVPALPIHHLEGHLLSP 120
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L++++ FPF+ALLVSGGHTQL+ V +G Y LLGE+LDDAAG+ FDK AK+L LGYPG
Sbjct: 121 LLADDAPRFPFVALLVSGGHTQLMHVAGVGRYELLGESLDDAAGEAFDKTAKLLGLGYPG 180
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GP++S ++ G +K PRPML++ +F+FSFSGLKT+VLN + + D A++A
Sbjct: 181 GPQLSALAAQGCAGRFKLPRPMLHSGDFDFSFSGLKTAVLNRVSSD--DWEPGLAADLAA 238
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F +A+++VL K +AALK+TG++ LVV GGVGAN++LR++L+ L + Y V YP+
Sbjct: 239 DFQEAVVEVLCAKALAALKHTGLDTLVVAGGVGANRRLRERLDNLAARRRYRVCYPEPAL 298
Query: 301 CTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R+E + + ++P+W + ++
Sbjct: 299 CTDNGAMIAFAGALRLEAGERRAAAPAVRVRPRWPLVEL 337
>sp|Q3BNE2|GCP_XANC5 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)
GN=gcp PE=3 SV=1
Length = 353
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/339 (48%), Positives = 239/339 (70%), Gaps = 7/339 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKVLGIESSCDETGVAVYDTALSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ++D +AYT GPGL G+LLVG+ +A S+A +++ P IG++H+EGHL
Sbjct: 61 PLIRQTLGEAGLRIDELDGVAYTAGPGLVGALLVGAGVARSLAWALDVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V ++G+Y +LGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQAPFVALLVSGGHTQLVSVKALGSYEVLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P YKF RPM +FSFSGLKT VL ++ D +A+
Sbjct: 181 YPGGPQLAALAETGTPGRYKFARPMTDRPGLDFSFSGLKTQVLLAWRSS--DQSDTTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L KC+ AL G N LVV GGVGANK+LR +L ++ V +P+
Sbjct: 239 IARGFEDAVVETLAIKCLRALDAAGCNTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKI 336
CTDNGAMIAFAGA+R++ +++ ++ P+W +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAGEHADAA--VHVTPRWDM 335
>sp|A4SZK1|GCP_POLSQ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=gcp
PE=3 SV=1
Length = 357
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/353 (52%), Positives = 244/353 (69%), Gaps = 17/353 (4%)
Query: 1 MIILGIESSCDDSGLALYDT--------HIKNLRSHVICSQNLVHKEYGGVVPELAARTH 52
MI+LGIE+SCD++G+ALY+T + + + SQ +H++YGGVVPELA+R H
Sbjct: 1 MIVLGIETSCDETGVALYNTIPWEEGKPAFQGILGQGLHSQIAMHRDYGGVVPELASRDH 60
Query: 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINH 112
I+ ++PLL + L S L+L ID +A+T+GPGL G+LLVGS+ A S+A +N P IG++H
Sbjct: 61 IRRVLPLLDESLAQSGLKLSDIDAVAFTQGPGLAGALLVGSAFAKSLAQGLNLPSIGVHH 120
Query: 113 LEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAK 172
LEGHLLSP L + FPFIALLVSGGHTQL+KV+ IG Y LLGETLDDAAG+ FDK AK
Sbjct: 121 LEGHLLSPLLGQTAPQFPFIALLVSGGHTQLMKVSGIGQYKLLGETLDDAAGEAFDKTAK 180
Query: 173 MLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKN------I 226
+L L YPGG IS ++E G P I+ P+PML++ + +FSFSGLKT+VLN K +
Sbjct: 181 LLGLDYPGGAAISKLAEKGRPGIFDLPKPMLHSGDLDFSFSGLKTAVLNQTKKFTEKNIV 240
Query: 227 KLDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILK 286
D + + A++AR F+D+I+ VL K ALK TG LV+ GGVGAN QLR LN
Sbjct: 241 GADEIAQFHADLARSFVDSIVAVLVSKSEKALKQTGCKHLVLAGGVGANLQLRAALNEKA 300
Query: 287 KQYNYTVFYPKKEFCTDNGAMIAFAGAMRI--ENNYKSESNYEFNIKPQWKIN 337
+ + V YP E CTDNG MIAFAGA+R+ ENN S ++ F+IKP+W +
Sbjct: 301 SRNGFEVHYPPLELCTDNGVMIAFAGALRMLAENN-GSNTSGAFDIKPRWDLQ 352
>sp|A1TP41|GCP_ACIAC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Acidovorax citrulli (strain AAC00-1) GN=gcp PE=3 SV=1
Length = 348
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/343 (50%), Positives = 249/343 (72%), Gaps = 6/343 (1%)
Query: 2 IILGIESSCDDSGLALY----DTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
+ILGIESSCD++G+AL D + L +H + SQ +H+ YGGVVPELA+R HI+ ++
Sbjct: 6 LILGIESSCDETGVALVRAPADGSVPTLLAHALHSQIDMHQAYGGVVPELASRDHIRRVL 65
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL +L ++ L ++D++AYTRGPGL G+LLVG+ +AC++ S+++PV+G++HLEGHL
Sbjct: 66 PLTGTVLAEADCRLAEVDVVAYTRGPGLAGALLVGAGVACALGASLDRPVLGVHHLEGHL 125
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSPFLS + FPF+ALLVSGGHTQL++V+ +G Y LLGET+DDAAG+ FDK AK+L LG
Sbjct: 126 LSPFLSADPPEFPFVALLVSGGHTQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLLGLG 185
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP +S ++E GD +K PRP+L++ N +FSF+GLKT+VL K + D L KA+
Sbjct: 186 YPGGPALSRLAEQGDAAAFKLPRPLLHSGNLDFSFAGLKTAVLTQAKKLG-DELPARKAD 244
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+A AI+DVL K +AAL+ +G+ ++VV GGVGAN+ LR +L+ + V YP+
Sbjct: 245 LAASTQAAIVDVLVKKTLAALQASGLRRVVVAGGVGANRLLRAQLDAACARMGVRVHYPE 304
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESN-YEFNIKPQWKINKI 339
CTDNGAMIA A AMR++ ++ + Y F++KP+W ++ +
Sbjct: 305 LHLCTDNGAMIAMAAAMRLQAGREAPNREYAFDVKPRWPLDAL 347
>sp|B2FK06|GCP_STRMK Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Stenotrophomonas maltophilia (strain K279a) GN=gcp
PE=3 SV=1
Length = 341
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 165/342 (48%), Positives = 240/342 (70%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MRVLGIESSCDETGVAVYDTGLSGSAALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ID +AYT GPGL G+LLVG+ +A S+A ++ P +G++H+EGHL
Sbjct: 61 PLVRQTLAEAGLGVGDIDGVAYTAGPGLVGALLVGAGVARSLAWALEVPAVGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V++IG Y LLGETLDDAAG+ FDK AK++ L
Sbjct: 121 LAPLMEDDPPEAPFVALLVSGGHTQLVAVDAIGQYRLLGETLDDAAGEAFDKTAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P Y+F RPM +FSFSGLKT VL ++ D ++ +A+
Sbjct: 181 YPGGPQLARLAEQGTPGAYRFARPMTDRPGLDFSFSGLKTQVLMAWRDS--DQSEQTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L+ KC AL+ G N +VV GGVGANK+LR +L + ++ +P+
Sbjct: 239 IARGFEDAVVETLSIKCERALEAAGTNVIVVAGGVGANKRLRARLQQMAERLGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ S + ++ P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAGQYSPP--KVDVTPRWDMATL 338
>sp|Q0AJ91|GCP_NITEC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Nitrosomonas eutropha (strain C91) GN=gcp PE=3 SV=1
Length = 338
Score = 362 bits (929), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/341 (52%), Positives = 246/341 (72%), Gaps = 5/341 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIE+SCD++G+ALYDT + L H + SQ +H++YGGVVPELA+R HI+ ++PL+
Sbjct: 1 MLVLGIETSCDETGVALYDTR-RKLLGHALYSQVDMHRDYGGVVPELASRDHIRRVLPLV 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+++L+ +N L+ ID IAYT+GPGL G+LL G+SI+ ++A + N PV+ I+HLEGHLLSP
Sbjct: 60 TQVLEQTNTSLETIDAIAYTQGPGLAGALLTGASISNALAFARNIPVLNIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
LS+ + FPF+ALLVSGGHTQL+ V IG Y LLGET+DDAAG+ FDK AK+L L YPG
Sbjct: 120 LLSDPAPDFPFVALLVSGGHTQLMHVKGIGQYKLLGETVDDAAGEAFDKTAKLLGLDYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
G ++ ++ G P +K PRPML +++ NFSFSGLKT+ +I K ++ + +A+IA
Sbjct: 180 GKLLADLATQGQPGRFKLPRPMLNSDDLNFSFSGLKTAAALLINKQKANT--QTRADIAL 237
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F DA+ DVL K IAALK T + +LVV GGVGAN +LR+KL VF+P+ EF
Sbjct: 238 AFEDAVTDVLVKKSIAALKITRLQQLVVAGGVGANSRLRQKLRHHLVGTGIAVFFPELEF 297
Query: 301 CTDNGAMIAFAGAMRIE--NNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGA+R++ N S+ F IK +W + +
Sbjct: 298 CTDNGAMIALAGALRLQQLNEKPPGSDGSFTIKARWNLEDL 338
>sp|Q5QY46|GCP_IDILO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM
15497 / L2-TR) GN=gcp PE=3 SV=1
Length = 344
Score = 362 bits (928), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 233/339 (68%), Gaps = 5/339 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M +LGIE+SCD++G+A+YDT K L +H + SQ +H +YGGVVPELA+R H++ +PL+
Sbjct: 1 MRVLGIETSCDETGVAVYDTE-KGLLAHQLYSQVKLHADYGGVVPELASRDHVRKTLPLI 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
LK + + +++D IAYT GPGL G+LLVG+ I S+A N P +G++H+EGHLL+P
Sbjct: 60 KAALKEAGISHQQLDGIAYTMGPGLVGALLVGACIGRSLAFGWNLPAVGVHHMEGHLLAP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L N FPF+ALLVSGGHTQL++V IG+Y LLGE++DDAAG+ FDK AK++ L YPG
Sbjct: 120 MLEENQPEFPFVALLVSGGHTQLVQVKGIGDYHLLGESVDDAAGEAFDKTAKLMGLDYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GP ++ ++E G+ + + FPRPM NFSFSGLKTS N + DS ++ A+IAR
Sbjct: 180 GPRLAALAEQGNSDRFTFPRPMTDRPGLNFSFSGLKTSAANTLAAN--DSDEQTLADIAR 237
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F DA++D L KC ALK TG +LVV GGV ANK LR KL L ++ +FYP+ EF
Sbjct: 238 AFEDAVVDTLVIKCRRALKETGYKRLVVAGGVSANKHLRAKLEALLEKQKGQIFYPRTEF 297
Query: 301 CTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGA+R+E + P+W + +
Sbjct: 298 CTDNGAMIALAGALRLEAGEREP--LAVKTHPRWPMTDL 334
>sp|Q8P494|GCP_XANCP Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xanthomonas campestris pv. campestris (strain ATCC
33913 / NCPPB 528 / LMG 568) GN=gcp PE=3 SV=1
Length = 354
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 165/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKVLGIESSCDETGVAVYDTALSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLIRQTLDEAGLRIDELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V ++G Y +LGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQPPFVALLVSGGHTQLVSVKALGAYEVLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P YKF RPM +FSFSGLKT VL + D +A+
Sbjct: 181 YPGGPQLAALAETGTPGRYKFARPMTDRPGLDFSFSGLKTQVLLAWRGS--DQSDTTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L KC+ AL N LVV GGVGANK+LR +L ++ V +P+
Sbjct: 239 IARGFEDAVVETLAIKCLRALDTADCNTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R+E +++ + + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLEAGEHADAAVQ--VTPRWDMASL 338
>sp|B0RXI2|GCP_XANCB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xanthomonas campestris pv. campestris (strain B100)
GN=gcp PE=3 SV=1
Length = 354
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 165/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKVLGIESSCDETGVAVYDTALSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLIRQTLDEAGLRIDELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V ++G Y +LGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQPPFVALLVSGGHTQLVSVKALGAYEVLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P YKF RPM +FSFSGLKT VL + D +A+
Sbjct: 181 YPGGPQLAALAETGTPGRYKFARPMTDRPGLDFSFSGLKTQVLLAWRGS--DQSDTTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L KC+ AL N LVV GGVGANK+LR +L ++ V +P+
Sbjct: 239 IARGFEDAVVETLAIKCLRALDTADCNTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R+E +++ + + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLEAGEHADAAVQ--VTPRWDMASL 338
>sp|Q4UPU5|GCP_XANC8 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=gcp PE=3 SV=1
Length = 354
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 165/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M +LGIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKVLGIESSCDETGVAVYDTALSGVPALRAHAVYSQIALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PL+ + L + L + ++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLIRQTLDEAGLRIDELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
L+P + ++ PF+ALLVSGGHTQL+ V ++G Y +LGETLDDAAG+ FDK AKM+ L
Sbjct: 121 LAPLMEDDPPQPPFVALLVSGGHTQLVSVKALGAYEVLGETLDDAAGEAFDKTAKMMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P YKF RPM +FSFSGLKT VL + D +A+
Sbjct: 181 YPGGPQLAALAETGTPGRYKFARPMTDRPGLDFSFSGLKTQVLLAWRGS--DQSDTTRAD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
IARGF DA+++ L KC+ AL N LVV GGVGANK+LR +L ++ V +P+
Sbjct: 239 IARGFEDAVVETLAIKCLRALDTADCNTLVVAGGVGANKRLRARLQEAAQRRGGRVCFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R+E +++ + + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLEAGEHADAAVQ--VTPRWDMASL 338
>sp|B1XVZ2|GCP_POLNS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=gcp PE=3 SV=1
Length = 357
Score = 360 bits (925), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 182/352 (51%), Positives = 244/352 (69%), Gaps = 15/352 (4%)
Query: 1 MIILGIESSCDDSGLALYDT--------HIKNLRSHVICSQNLVHKEYGGVVPELAARTH 52
MI+LGIE+SCD++G+ALY+T + + + SQ +H++YGGVVPELA+R H
Sbjct: 1 MIVLGIETSCDETGVALYNTTPWGEGKPAFQGILGQGLHSQIAMHRDYGGVVPELASRDH 60
Query: 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINH 112
I+ ++PLL + L S+L+L ID +A+T+GPGL G+LLVGS+ A S+A +N P IG++H
Sbjct: 61 IRRVLPLLDQSLAQSSLKLTDIDAVAFTQGPGLAGALLVGSAFAKSLAQGLNLPSIGVHH 120
Query: 113 LEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAK 172
LEGHLLSP L + FPFIALLVSGGHTQL+KV+ IG+Y LLGETLDDAAG+ FDK AK
Sbjct: 121 LEGHLLSPLLGQTAPQFPFIALLVSGGHTQLMKVSGIGHYELLGETLDDAAGEAFDKTAK 180
Query: 173 MLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIK----- 227
+L L YPGG IS ++E G I+ P+PML++ + +FSFSGLKT+VLN +K +
Sbjct: 181 LLGLDYPGGAAISKLAEQGRSGIFDLPKPMLHSGDLDFSFSGLKTAVLNQVKKFEEKKIA 240
Query: 228 -LDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILK 286
+ + A++AR F++AI+ VL K ALK TG LV+ GGVGAN QLR LN
Sbjct: 241 ISSEIAQFHADLARSFVNAIVAVLVSKSEKALKQTGCKHLVLAGGVGANLQLRSALNEKA 300
Query: 287 KQYNYTVFYPKKEFCTDNGAMIAFAGAMR-IENNYKSESNYEFNIKPQWKIN 337
+ N+ V YP E CTDNG MIAFAGA+R + N S ++ F+IKP+W +
Sbjct: 301 TRNNFEVHYPPLELCTDNGVMIAFAGALRMLAKNNGSTTSGAFDIKPRWDLQ 352
>sp|Q82XN2|GCP_NITEU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=gcp PE=3 SV=1
Length = 337
Score = 360 bits (924), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/340 (51%), Positives = 245/340 (72%), Gaps = 4/340 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M++LGIE+SCD++G+ALYDT + L H + SQ +H+EYGGVVPELA+R HI+ I+PL+
Sbjct: 1 MLVLGIETSCDETGVALYDT-CQGLLGHTLYSQVDMHREYGGVVPELASRDHIRRILPLI 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+L + S+ L+ +D IA T+GPGL G+LL G+S + ++A + N PV+ I+HLEGHLLSP
Sbjct: 60 RQLFRQSDTSLESVDAIACTQGPGLAGALLTGASFSSALAFARNIPVLNIHHLEGHLLSP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
LS+ + FPF+ALLVSGGHTQL++V+ IG Y LLGET+DDAAG+ FDK AK+LDL YPG
Sbjct: 120 LLSDPAPDFPFVALLVSGGHTQLMRVDGIGQYRLLGETVDDAAGEAFDKTAKLLDLDYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
G ++ ++ G ++ PRPML +N+ NFSFSGLKT+ +I +++S + +A+IA
Sbjct: 180 GKLLAELATQGRAEQFRLPRPMLNSNDLNFSFSGLKTAAALLIGKHEMNS--QTRADIAF 237
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F DA+ DVL K + AL TG+ +LVV GGVGAN +LR+KL + TVF+P EF
Sbjct: 238 AFEDAVTDVLVKKSVTALNITGLQQLVVAGGVGANSRLRQKLLHHLSGTDITVFFPALEF 297
Query: 301 CTDNGAMIAFAGAMRIEN-NYKSESNYEFNIKPQWKINKI 339
CTDNGAMIA AGA+R++ + + + F +K +W + +
Sbjct: 298 CTDNGAMIALAGALRLQQLDERLRAGGSFTVKARWNLEDL 337
>sp|A1W9P4|GCP_ACISJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Acidovorax sp. (strain JS42) GN=gcp PE=3 SV=2
Length = 349
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/344 (49%), Positives = 247/344 (71%), Gaps = 6/344 (1%)
Query: 1 MIILGIESSCDDSGLALYDT----HIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTI 56
+ILGIESSCD++G+AL + L +H + SQ +H+ YGGVVPELA+R HI+ +
Sbjct: 3 QLILGIESSCDETGVALVRAGEGGAVPVLLAHALHSQIDMHQAYGGVVPELASRDHIRRV 62
Query: 57 IPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGH 116
+PL ++L+ S L+ +D++AYTRGPGL G+LLVG+ +AC++ +++KPV+G++HLEGH
Sbjct: 63 LPLTREVLRESGERLEDVDVVAYTRGPGLAGALLVGAGVACALGAALDKPVLGVHHLEGH 122
Query: 117 LLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDL 176
LLSPFLS++ FPF+ALLVSGGHTQL++V +G Y +LGET+DDAAG+ FDK AK++ L
Sbjct: 123 LLSPFLSSDPPEFPFVALLVSGGHTQLMRVEGVGRYEILGETIDDAAGEAFDKSAKLMGL 182
Query: 177 GYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKA 236
GYPGGP +S ++E G +K PRP+L++ + +FSF+GLKT+VL K + D L KA
Sbjct: 183 GYPGGPALSRLAEQGSATAFKLPRPLLHSGDLDFSFAGLKTAVLTQAKKLG-DELTARKA 241
Query: 237 NIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYP 296
++A AI++VL K +AAL+ TG+ ++VV GGVGAN+ LR +LN + V YP
Sbjct: 242 DLAASTEAAIVEVLVKKTLAALQKTGLQRVVVAGGVGANRHLRAQLNAACARAKVRVHYP 301
Query: 297 KKEFCTDNGAMIAFAGAMRIE-NNYKSESNYEFNIKPQWKINKI 339
+ CTDNGAMIA A AMR++ + +Y F++KP+W ++ I
Sbjct: 302 ELHLCTDNGAMIAMAAAMRLQAGQQQPNRDYAFDVKPRWPLDAI 345
>sp|Q87B17|GCP_XYLFT Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964)
GN=gcp PE=3 SV=1
Length = 348
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M I+GIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKIIGIESSCDETGVAVYDTALSGSAALRAHSVYSQVALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PLL + L + L ++++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLLRQTLAEAKLSVEELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSP L ++ PF+ALLVSGGHTQL+ V++IG+Y LLGETLDDAAG+ FDK+AK++ L
Sbjct: 121 LSPLLEDDPPEVPFVALLVSGGHTQLVAVDAIGDYRLLGETLDDAAGEAFDKVAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P + F RPM+ +FSFSGLKT VL +N D + +
Sbjct: 181 YPGGPQLAALAERGIPGRFCFTRPMVDRPGLDFSFSGLKTQVLLAWRNS--DQSDAIRVD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+ARGF DA++D L KC AL LVV GGVGANK LR +L + +Q +P+
Sbjct: 239 VARGFEDAVVDTLAIKCERALDTVACQTLVVAGGVGANKCLRARLQAMCRQRGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ +S+ + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAG--QQSDVAVRVTPRWDMAAL 338
>sp|B0U4B5|GCP_XYLFM Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xylella fastidiosa (strain M12) GN=gcp PE=3 SV=1
Length = 348
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M I+GIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKIIGIESSCDETGVAVYDTALSGSAALRAHSVYSQVALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PLL + L + L ++++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLLRQTLAEAKLSVEELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSP L ++ PF+ALLVSGGHTQL+ V++IG+Y LLGETLDDAAG+ FDK+AK++ L
Sbjct: 121 LSPLLEDDPPEVPFVALLVSGGHTQLVAVDAIGDYRLLGETLDDAAGEAFDKVAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P + F RPM+ +FSFSGLKT VL +N D + +
Sbjct: 181 YPGGPQLAALAERGIPGRFCFTRPMVDRPGLDFSFSGLKTQVLLAWRNS--DQSDAIRVD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+ARGF DA++D L KC AL LVV GGVGANK LR +L + +Q +P+
Sbjct: 239 VARGFEDAVVDTLAIKCERALDTVACQTLVVAGGVGANKCLRARLQAMCRQRGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ +S+ + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAG--QQSDVAVRVTPRWDMAAL 338
>sp|B2I7X4|GCP_XYLF2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xylella fastidiosa (strain M23) GN=gcp PE=3 SV=1
Length = 348
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M I+GIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKIIGIESSCDETGVAVYDTALSGSAALRAHSVYSQVALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PLL + L + L ++++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLLRQTLAEAKLSVEELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSP L ++ PF+ALLVSGGHTQL+ V++IG+Y LLGETLDDAAG+ FDK+AK++ L
Sbjct: 121 LSPLLEDDPPEVPFVALLVSGGHTQLVAVDAIGDYRLLGETLDDAAGEAFDKVAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P + F RPM+ +FSFSGLKT VL +N D + +
Sbjct: 181 YPGGPQLAALAERGIPGRFCFTRPMVDRPGLDFSFSGLKTQVLLAWRNS--DQSDAIRVD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+ARGF DA++D L KC AL LVV GGVGANK LR +L + +Q +P+
Sbjct: 239 VARGFEDAVVDTLAIKCERALDTVACQTLVVAGGVGANKCLRARLQAMCRQRGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ +S+ + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAG--QQSDVAVRVTPRWDMAAL 338
>sp|Q9PG67|GCP_XYLFA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Xylella fastidiosa (strain 9a5c) GN=gcp PE=3 SV=1
Length = 348
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 236/342 (69%), Gaps = 7/342 (2%)
Query: 1 MIILGIESSCDDSGLALYDTHIKN---LRSHVICSQNLVHKEYGGVVPELAARTHIQTII 57
M I+GIESSCD++G+A+YDT + LR+H + SQ +H EYGGVVPELA+R H++ ++
Sbjct: 1 MKIIGIESSCDETGVAVYDTALSGFAALRAHSVYSQVALHAEYGGVVPELASRDHVRKLL 60
Query: 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117
PLL + L + L ++++D +AYT GPGL G+LLVG+ +A ++A ++ P IG++H+EGHL
Sbjct: 61 PLLRQTLAEAKLSVEELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHHMEGHL 120
Query: 118 LSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLG 177
LSP L ++ PF+ALLVSGGHTQL+ V++IG+Y LLGETLDDAAG+ FDK+AK++ L
Sbjct: 121 LSPLLEDDPPEVPFVALLVSGGHTQLVAVDAIGDYRLLGETLDDAAGEAFDKVAKLMGLP 180
Query: 178 YPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237
YPGGP+++ ++E G P + F RPM+ +FSFSGLKT VL +N D + +
Sbjct: 181 YPGGPQLAALAEQGIPGRFCFTRPMVDRPGLDFSFSGLKTQVLLAWRNS--DQSDAIRVD 238
Query: 238 IARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297
+ARGF DA++D L KC AL LVV GGVGANK LR +L + +Q +P+
Sbjct: 239 VARGFEDAVVDTLAIKCERALDTVACQTLVVAGGVGANKCLRARLQAMCRQRGGRACFPR 298
Query: 298 KEFCTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAGA+R++ +S+ + P+W + +
Sbjct: 299 PALCTDNGAMIAFAGALRLQAG--QQSDIAVRVTPRWDMAAL 338
>sp|Q0HSD5|GCP_SHESR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Shewanella sp. (strain MR-7) GN=gcp PE=3 SV=1
Length = 338
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 168/339 (49%), Positives = 239/339 (70%), Gaps = 5/339 (1%)
Query: 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLL 60
M +LGIE+SCD++G+A+YD + L SH + SQ +H +YGGVVPELA+R H++ I+PL+
Sbjct: 1 MRVLGIETSCDETGIAVYDDKL-GLLSHALYSQVKLHADYGGVVPELASRDHVRKIVPLI 59
Query: 61 SKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSP 120
+ LKN+N E+ +D IAYT+GPGL G+LLVG+ + S+A + NKP IG++H+EGHLL+P
Sbjct: 60 RQALKNANTEIADLDGIAYTKGPGLIGALLVGACVGRSLAFAWNKPAIGVHHMEGHLLAP 119
Query: 121 FLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLDLGYPG 180
L +++ FPF+ALLVSGGH+ L+KV+ IG Y +LGE++DDAAG+ FDK AK++ L YPG
Sbjct: 120 MLEDDAPEFPFVALLVSGGHSMLVKVDGIGLYEVLGESVDDAAGEAFDKTAKLMGLDYPG 179
Query: 181 GPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240
GP ++ ++ G+P Y+FPRPM +FSFSGLKT N I D ++ +ANIAR
Sbjct: 180 GPRLAKLAAKGEPAGYQFPRPMTDRPGLDFSFSGLKTFTANTIAAEPDD--EQTRANIAR 237
Query: 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEF 300
F +A++D L KC ALK TG N+LV+ GGV AN +LR+ L + V+YP+ EF
Sbjct: 238 AFEEAVVDTLAIKCRRALKQTGYNRLVIAGGVSANTRLRETLAEMMTSIGGRVYYPRGEF 297
Query: 301 CTDNGAMIAFAGAMRIENNYKSESNYEFNIKPQWKINKI 339
CTDNGAMIAFAG R++ + + +P+W ++ +
Sbjct: 298 CTDNGAMIAFAGLQRLKAG--QQEDLAVKGQPRWPLDTL 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,403,631
Number of Sequences: 539616
Number of extensions: 5673387
Number of successful extensions: 16312
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 13298
Number of HSP's gapped (non-prelim): 805
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)