Query psy9394
Match_columns 339
No_of_seqs 192 out of 1491
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 18:00:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eno_A Putative O-sialoglycopr 100.0 2.8E-68 9.4E-73 501.2 36.2 320 1-339 6-325 (334)
2 2ivn_A O-sialoglycoprotein end 100.0 9.3E-63 3.2E-67 463.9 34.7 319 1-339 1-320 (330)
3 3en9_A Glycoprotease, O-sialog 100.0 1.9E-61 6.4E-66 483.4 35.0 319 1-339 6-324 (540)
4 3ven_A O-carbamoyltransferase 100.0 1.7E-47 5.7E-52 377.5 11.8 294 3-322 12-363 (576)
5 3vth_A Hydrogenase maturation 100.0 1.5E-37 5.2E-42 316.7 32.7 256 38-320 424-751 (761)
6 3ttc_A HYPF, transcriptional r 100.0 3.2E-38 1.1E-42 316.0 27.0 250 37-316 326-651 (657)
7 4g9i_A Hydrogenase maturation 100.0 2.3E-37 7.9E-42 316.9 20.5 254 38-315 422-758 (772)
8 4ehu_A Activator of 2-hydroxyi 100.0 1.4E-27 4.9E-32 218.7 28.3 270 1-334 1-274 (276)
9 3r6m_A YEAZ, resuscitation pro 99.9 5E-24 1.7E-28 186.7 11.8 124 1-145 2-125 (213)
10 2gel_A Putative GRAM negative 99.9 5.5E-23 1.9E-27 183.2 12.8 123 2-145 2-124 (231)
11 2a6a_A Hypothetical protein TM 99.9 6.6E-22 2.3E-26 174.2 12.3 120 2-145 13-132 (218)
12 1hux_A Activator of (R)-2-hydr 99.8 2.5E-18 8.7E-23 156.8 22.7 249 1-315 3-255 (270)
13 2ews_A Pantothenate kinase; PA 99.8 1.5E-17 5E-22 152.0 19.3 240 1-298 20-273 (287)
14 2i7n_A Pantothenate kinase 1; 99.3 4.5E-11 1.5E-15 111.9 16.0 227 58-313 86-357 (360)
15 3h1q_A Ethanolamine utilizatio 98.4 0.00017 5.8E-09 64.6 23.4 240 2-313 29-271 (272)
16 3qbx_A Anhydro-N-acetylmuramic 97.9 0.0019 6.4E-08 60.4 21.6 237 56-323 70-344 (371)
17 2qm1_A Glucokinase; alpha-beta 97.9 0.00094 3.2E-08 61.3 18.8 126 2-139 7-145 (326)
18 2gup_A ROK family protein; sug 97.9 0.0065 2.2E-07 54.8 23.6 114 1-139 4-129 (292)
19 2aa4_A Mannac kinase, putative 97.7 0.009 3.1E-07 53.7 21.4 120 1-139 1-132 (289)
20 3cqy_A Anhydro-N-acetylmuramic 97.6 0.0074 2.5E-07 56.4 19.1 235 57-323 75-350 (370)
21 2hoe_A N-acetylglucosamine kin 97.5 0.026 9E-07 53.0 22.4 123 2-137 88-221 (380)
22 2ch5_A NAGK protein; transfera 97.5 0.065 2.2E-06 49.3 30.0 108 1-119 6-117 (347)
23 4htl_A Beta-glucoside kinase; 97.4 0.072 2.5E-06 48.1 23.4 118 1-139 4-134 (297)
24 4db3_A Glcnac kinase, N-acetyl 97.2 0.048 1.6E-06 50.1 20.3 104 1-121 24-138 (327)
25 3vov_A Glucokinase, hexokinase 97.2 0.046 1.6E-06 49.6 19.4 120 1-137 1-133 (302)
26 1z05_A Transcriptional regulat 97.1 0.17 5.7E-06 48.3 23.9 123 2-137 109-243 (429)
27 1z6r_A MLC protein; transcript 97.1 0.03 1E-06 52.9 18.5 125 2-139 86-223 (406)
28 1saz_A Probable butyrate kinas 97.1 0.11 3.6E-06 48.9 21.6 102 2-114 3-131 (381)
29 3djc_A Type III pantothenate k 97.0 0.064 2.2E-06 47.9 18.7 62 2-80 3-64 (266)
30 3r8e_A Hypothetical sugar kina 96.9 0.23 7.8E-06 45.3 21.4 122 2-139 20-155 (321)
31 2yhw_A Bifunctional UDP-N-acet 96.8 0.18 6E-06 46.4 20.3 123 1-137 30-166 (343)
32 1zbs_A Hypothetical protein PG 96.7 0.3 1E-05 43.8 22.0 102 3-120 2-105 (291)
33 3g25_A Glycerol kinase; IDP007 96.6 0.017 5.8E-07 56.4 12.3 85 233-324 373-459 (501)
34 3h3n_X Glycerol kinase; ATP-bi 96.6 0.02 6.8E-07 56.0 12.5 84 233-323 372-457 (506)
35 3ezw_A Glycerol kinase; glycer 96.5 0.022 7.5E-07 56.0 12.4 85 233-324 371-457 (526)
36 2p3r_A Glycerol kinase; glycer 96.5 0.023 7.9E-07 55.7 12.4 84 233-323 370-455 (510)
37 2w40_A Glycerol kinase, putati 96.5 0.019 6.6E-07 56.0 11.7 84 233-323 375-461 (503)
38 2d4w_A Glycerol kinase; alpha 96.5 0.021 7.2E-07 55.8 11.9 84 233-323 372-457 (504)
39 3i8b_A Xylulose kinase; strain 96.4 0.023 8E-07 55.7 11.7 83 234-324 395-479 (515)
40 2dpn_A Glycerol kinase; thermu 96.3 0.022 7.4E-07 55.6 11.0 82 233-321 367-450 (495)
41 3vgl_A Glucokinase; ROK family 96.3 0.62 2.1E-05 42.3 23.8 119 2-139 3-133 (321)
42 2zf5_O Glycerol kinase; hypert 96.3 0.02 7E-07 55.8 10.6 84 233-323 364-447 (497)
43 2itm_A Xylulose kinase, xylulo 96.2 0.021 7.3E-07 55.4 10.5 84 233-323 356-441 (484)
44 4e1j_A Glycerol kinase; struct 96.2 0.031 1.1E-06 54.9 11.4 84 233-323 392-479 (520)
45 3hz6_A Xylulokinase; xylulose, 96.1 0.044 1.5E-06 53.7 11.9 83 233-323 374-457 (511)
46 3ifr_A Carbohydrate kinase, FG 95.9 0.046 1.6E-06 53.5 11.2 84 233-323 370-454 (508)
47 3ll3_A Gluconate kinase; xylul 95.9 0.048 1.7E-06 53.3 11.2 84 233-323 363-447 (504)
48 3htv_A D-allose kinase, alloki 95.8 1.1 3.7E-05 40.5 23.1 120 2-137 8-141 (310)
49 2h3g_X Biosynthetic protein; p 95.7 1.1 3.6E-05 39.9 20.1 62 3-80 2-63 (268)
50 3l0q_A Xylulose kinase; xlylul 95.5 0.1 3.5E-06 51.6 11.9 82 234-323 410-496 (554)
51 3ezw_A Glycerol kinase; glycer 95.4 0.04 1.4E-06 54.1 8.5 76 2-80 5-80 (526)
52 2uyt_A Rhamnulokinase; rhamnos 95.3 0.16 5.4E-06 49.3 12.2 79 232-318 361-441 (489)
53 3jvp_A Ribulokinase; PSI-II, N 95.1 0.15 5E-06 50.7 11.5 79 233-319 409-490 (572)
54 3epq_A Putative fructokinase; 94.9 2.1 7.2E-05 38.5 18.7 113 1-137 3-132 (302)
55 2e2o_A Hexokinase; acetate and 94.8 2.1 7E-05 38.2 28.8 114 1-137 2-115 (299)
56 2p3r_A Glycerol kinase; glycer 94.4 0.16 5.4E-06 49.7 9.6 78 1-81 3-80 (510)
57 4bc3_A Xylulose kinase; transf 94.4 0.14 4.7E-06 50.5 9.2 79 234-320 405-485 (538)
58 2ap1_A Putative regulator prot 94.3 2.9 0.0001 37.7 20.6 104 1-121 24-138 (327)
59 3g25_A Glycerol kinase; IDP007 94.3 0.18 6.1E-06 49.1 9.7 76 2-80 7-82 (501)
60 3ifr_A Carbohydrate kinase, FG 94.1 0.16 5.6E-06 49.5 9.0 76 2-80 8-83 (508)
61 3h3n_X Glycerol kinase; ATP-bi 93.8 0.22 7.7E-06 48.5 9.4 76 2-80 6-81 (506)
62 2dpn_A Glycerol kinase; thermu 93.8 0.25 8.5E-06 48.0 9.7 77 1-80 2-78 (495)
63 3l0q_A Xylulose kinase; xlylul 93.8 0.15 5.2E-06 50.3 8.3 77 2-81 6-82 (554)
64 2zf5_O Glycerol kinase; hypert 93.7 0.22 7.5E-06 48.4 9.1 76 2-80 4-79 (497)
65 4e1j_A Glycerol kinase; struct 93.5 0.29 1E-05 47.9 9.7 76 2-80 27-102 (520)
66 2d4w_A Glycerol kinase; alpha 93.5 0.29 1E-05 47.6 9.5 76 2-80 3-78 (504)
67 3hz6_A Xylulokinase; xylulose, 93.4 0.25 8.5E-06 48.2 9.0 76 2-81 6-81 (511)
68 1zc6_A Probable N-acetylglucos 93.2 1.2 4.1E-05 40.0 12.7 103 2-120 12-118 (305)
69 1hjr_A Holliday junction resol 93.1 0.48 1.6E-05 38.7 8.8 20 1-20 1-20 (158)
70 4ep4_A Crossover junction endo 93.0 0.31 1E-05 40.2 7.5 21 1-21 1-21 (166)
71 3jvp_A Ribulokinase; PSI-II, N 92.8 0.3 1E-05 48.3 8.7 78 2-81 6-94 (572)
72 1iv0_A Hypothetical protein; r 92.8 0.42 1.4E-05 35.8 7.4 87 1-113 1-94 (98)
73 1vhx_A Putative holliday junct 92.8 0.24 8.1E-06 40.2 6.5 90 1-112 3-98 (150)
74 2w40_A Glycerol kinase, putati 92.6 0.35 1.2E-05 47.0 8.7 76 2-80 5-82 (503)
75 3i33_A Heat shock-related 70 k 91.7 0.4 1.4E-05 44.9 7.7 53 262-319 351-403 (404)
76 4bc3_A Xylulose kinase; transf 91.6 0.38 1.3E-05 47.2 7.6 78 2-81 11-98 (538)
77 3bex_A Type III pantothenate k 91.4 6.8 0.00023 34.2 18.2 41 234-274 182-222 (249)
78 3qfu_A 78 kDa glucose-regulate 91.2 0.51 1.7E-05 43.9 7.8 49 263-316 344-392 (394)
79 4b9q_A Chaperone protein DNAK; 91.1 0.68 2.3E-05 46.1 9.0 68 250-323 316-388 (605)
80 3ll3_A Gluconate kinase; xylul 90.9 0.96 3.3E-05 43.9 9.7 74 2-81 5-78 (504)
81 2v7y_A Chaperone protein DNAK; 90.1 1.2 3.9E-05 43.4 9.4 53 262-320 302-354 (509)
82 1dkg_D Molecular chaperone DNA 89.9 0.57 1.9E-05 43.5 6.8 60 250-315 316-380 (383)
83 4gni_A Putative heat shock pro 89.7 1.8 6E-05 40.5 10.2 68 249-317 326-401 (409)
84 3i8b_A Xylulose kinase; strain 89.1 0.83 2.8E-05 44.6 7.6 66 2-81 6-72 (515)
85 3mcp_A Glucokinase; structural 88.9 14 0.00049 34.1 19.6 100 2-121 10-126 (366)
86 2itm_A Xylulose kinase, xylulo 88.9 1.9 6.5E-05 41.5 9.9 73 3-80 2-74 (484)
87 1jce_A ROD shape-determining p 87.5 0.94 3.2E-05 41.3 6.5 46 264-315 279-324 (344)
88 1bdg_A Hexokinase; phosphotran 86.9 22 0.00074 33.9 22.6 75 237-315 365-445 (451)
89 3d2f_A Heat shock protein homo 85.6 2 6.7E-05 43.4 8.1 52 263-320 335-386 (675)
90 3h6e_A Carbohydrate kinase, FG 84.6 0.93 3.2E-05 43.8 5.0 70 236-315 362-434 (482)
91 1yuw_A Heat shock cognate 71 k 83.5 2.3 7.9E-05 41.8 7.4 65 251-320 314-383 (554)
92 3h6e_A Carbohydrate kinase, FG 81.9 3.3 0.00011 39.9 7.7 69 2-80 7-75 (482)
93 2zgy_A Plasmid segregation pro 81.6 3.9 0.00013 36.8 7.7 44 262-313 272-318 (320)
94 1woq_A Inorganic polyphosphate 81.6 25 0.00087 30.4 13.7 108 1-121 12-132 (267)
95 2w36_A Endonuclease V; hypoxan 81.5 9.4 0.00032 32.8 9.5 97 2-113 38-140 (225)
96 2kho_A Heat shock protein 70; 79.4 1.9 6.6E-05 42.8 5.2 53 262-320 333-385 (605)
97 1nu0_A Hypothetical protein YQ 78.3 6.5 0.00022 31.1 7.0 90 2-115 4-99 (138)
98 2q2r_A Glucokinase 1, putative 78.3 11 0.00037 34.7 9.7 28 1-29 29-60 (373)
99 4ijn_A Acetate kinase, acetoki 75.9 2.6 8.8E-05 39.5 4.5 68 1-79 23-92 (398)
100 3goc_A Endonuclease V; alpha-b 75.5 22 0.00077 30.7 10.0 95 2-111 41-142 (237)
101 2uyt_A Rhamnulokinase; rhamnos 74.3 6.7 0.00023 37.6 7.3 26 2-28 5-30 (489)
102 2yhx_A Hexokinase B; transfera 74.3 61 0.0021 30.8 22.9 126 2-139 62-212 (457)
103 3ga2_A Endonuclease V; alpha-b 74.2 17 0.00058 31.6 9.0 95 2-111 41-144 (246)
104 3r9p_A ACKA; ssgcid, seattle s 72.2 4.7 0.00016 37.7 5.3 70 1-79 12-83 (391)
105 4h0o_A Acetate kinase; askha ( 70.9 8.5 0.00029 36.0 6.7 51 240-290 303-355 (404)
106 4ijn_A Acetate kinase, acetoki 68.3 16 0.00056 34.1 8.1 51 240-290 300-352 (398)
107 1g99_A Acetate kinase; alpha/b 68.3 23 0.00078 33.3 9.1 72 243-318 302-398 (408)
108 4a2a_A Cell division protein F 66.8 13 0.00045 34.9 7.4 52 234-286 290-352 (419)
109 1zxo_A Conserved hypothetical 65.6 5.7 0.0002 35.2 4.4 101 2-120 1-103 (291)
110 3r9p_A ACKA; ssgcid, seattle s 65.4 19 0.00064 33.6 7.8 49 242-290 293-343 (391)
111 2e1z_A Propionate kinase; TDCD 65.3 23 0.00078 33.3 8.4 70 243-316 310-406 (415)
112 3khy_A Propionate kinase; csgi 64.8 7.7 0.00026 36.1 5.1 50 242-291 292-343 (384)
113 2fxu_A Alpha-actin-1, actin, a 62.6 13 0.00045 34.1 6.4 50 263-315 294-348 (375)
114 2d0o_A DIOL dehydratase-reacti 62.5 20 0.00068 35.1 7.6 68 1-79 2-73 (610)
115 2iir_A Acetate kinase; transfe 60.3 36 0.0012 31.8 8.8 33 1-33 1-33 (403)
116 2ych_A Competence protein PILM 59.0 22 0.00074 32.4 7.2 31 262-295 306-336 (377)
117 1zxo_A Conserved hypothetical 58.6 3 0.0001 37.1 1.1 45 262-314 232-276 (291)
118 2w6k_A COBE; biosynthetic prot 58.6 25 0.00086 27.9 6.5 51 54-111 25-75 (145)
119 1sz2_A Glucokinase, glucose ki 57.9 18 0.00062 32.5 6.4 96 2-122 15-121 (332)
120 3zyy_X Iron-sulfur cluster bin 53.4 40 0.0014 33.5 8.3 77 2-81 207-297 (631)
121 4h0p_A Acetate kinase; askha ( 48.9 29 0.001 32.8 6.1 52 239-290 322-381 (438)
122 2iir_A Acetate kinase; transfe 48.2 29 0.00099 32.5 6.0 26 262-287 322-348 (403)
123 4apw_A ALP12; actin-like prote 48.0 70 0.0024 28.7 8.6 30 263-297 279-308 (329)
124 3il3_A 3-oxoacyl-[acyl-carrier 48.0 41 0.0014 30.1 7.0 45 53-106 223-267 (323)
125 1sz2_A Glucokinase, glucose ki 47.7 81 0.0028 28.1 9.0 65 247-315 249-325 (332)
126 4dfe_A 3-oxoacyl-[acyl-carrier 47.4 35 0.0012 30.7 6.4 29 54-84 234-262 (333)
127 1cza_N Hexokinase type I; stru 47.0 35 0.0012 35.6 7.1 57 2-70 79-144 (917)
128 1nbw_A Glycerol dehydratase re 45.4 47 0.0016 32.6 7.1 66 1-76 2-69 (607)
129 3h78_A PQS biosynthetic enzyme 45.3 36 0.0012 31.1 6.2 31 53-85 253-283 (359)
130 2e1z_A Propionate kinase; TDCD 44.2 32 0.0011 32.3 5.6 77 1-79 18-98 (415)
131 3lma_A Stage V sporulation pro 44.2 60 0.0021 29.7 7.4 48 56-111 59-107 (347)
132 4e1l_A Acetoacetyl-COA thiolas 43.9 32 0.0011 31.8 5.7 28 54-81 31-58 (395)
133 4dd5_A Acetyl-COA acetyltransf 43.6 31 0.0011 31.9 5.6 28 54-81 33-60 (396)
134 1k8k_A ARP3, actin-like protei 42.5 32 0.0011 31.9 5.5 25 264-288 317-341 (418)
135 1woq_A Inorganic polyphosphate 42.4 38 0.0013 29.2 5.7 56 255-318 207-263 (267)
136 3sk3_A Acetate kinase, acetoki 42.2 20 0.00068 33.7 3.9 49 239-287 314-365 (415)
137 4efi_A 3-oxoacyl-(acyl-carrier 41.7 40 0.0014 30.7 5.9 29 54-84 244-272 (354)
138 3bzc_A TEX; helix-turn-helix, 41.5 2.5E+02 0.0084 28.7 12.1 96 2-120 330-429 (785)
139 4ewp_A 3-oxoacyl-[acyl-carrier 40.9 28 0.00096 31.4 4.8 44 54-106 249-292 (350)
140 3lma_A Stage V sporulation pro 40.9 53 0.0018 30.0 6.5 46 56-107 209-254 (347)
141 1nbw_A Glycerol dehydratase re 40.3 58 0.002 32.0 6.9 49 264-314 552-604 (607)
142 3gwa_A 3-oxoacyl-(acyl-carrier 39.1 42 0.0014 30.6 5.7 31 53-85 265-295 (365)
143 3ss6_A Acetyl-COA acetyltransf 38.5 35 0.0012 31.5 5.0 28 54-81 31-58 (394)
144 2f9w_A Pantothenate kinase; CO 38.2 2E+02 0.0069 25.0 21.5 42 233-274 202-244 (271)
145 3s21_A 3-oxoacyl-[ACP] synthas 37.9 45 0.0016 30.0 5.7 29 54-84 246-274 (345)
146 1mzj_A Beta-ketoacylsynthase I 37.6 56 0.0019 29.2 6.2 41 54-99 231-271 (339)
147 3psf_A Transcription elongatio 36.3 2.6E+02 0.0091 29.4 11.6 99 2-120 520-630 (1030)
148 3h78_A PQS biosynthetic enzyme 35.5 58 0.002 29.7 6.0 27 55-81 77-103 (359)
149 4dfe_A 3-oxoacyl-[acyl-carrier 34.1 39 0.0013 30.3 4.5 28 54-81 67-94 (333)
150 2d0o_A DIOL dehydratase-reacti 34.1 67 0.0023 31.5 6.2 52 264-315 550-603 (610)
151 3o8m_A Hexokinase; rnaseh-like 33.9 3.2E+02 0.011 26.0 12.1 64 2-70 81-144 (485)
152 2x3e_A 3-oxoacyl-[acyl-carrier 33.7 46 0.0016 29.7 4.9 41 54-99 224-264 (331)
153 3led_A 3-oxoacyl-acyl carrier 33.5 72 0.0025 29.5 6.3 41 54-99 291-331 (392)
154 1ytl_A Acetyl-COA decarboxylas 32.9 53 0.0018 26.7 4.7 30 263-294 36-65 (174)
155 1zc6_A Probable N-acetylglucos 32.8 34 0.0012 30.2 3.8 44 239-283 228-273 (305)
156 3h1q_A Ethanolamine utilizatio 31.7 1.6E+02 0.0056 24.9 8.1 23 3-27 141-163 (272)
157 2ych_A Competence protein PILM 30.7 2.9E+02 0.0099 24.6 10.0 25 2-28 192-216 (377)
158 3eef_A N-carbamoylsarcosine am 30.5 82 0.0028 25.4 5.6 38 259-298 106-143 (182)
159 3cet_A Conserved archaeal prot 30.5 52 0.0018 29.9 4.5 48 233-283 246-293 (334)
160 1nf9_A Phenazine biosynthesis 30.1 81 0.0028 26.0 5.6 38 259-298 138-175 (207)
161 4efi_A 3-oxoacyl-(acyl-carrier 30.1 49 0.0017 30.1 4.5 26 56-81 70-95 (354)
162 3goa_A 3-ketoacyl-COA thiolase 29.9 67 0.0023 29.5 5.5 28 54-81 29-57 (387)
163 3psi_A Transcription elongatio 29.8 3.9E+02 0.013 28.8 11.7 29 2-31 517-550 (1219)
164 3gwa_A 3-oxoacyl-(acyl-carrier 28.7 54 0.0019 29.9 4.6 72 249-323 267-343 (365)
165 3js6_A Uncharacterized PARM pr 28.5 87 0.003 28.4 5.9 24 1-27 4-27 (355)
166 4a2a_A Cell division protein F 28.5 2.8E+02 0.0096 25.6 9.6 24 2-27 207-230 (419)
167 3mcw_A Putative hydrolase; iso 28.0 92 0.0032 25.6 5.5 36 260-297 110-145 (198)
168 1j2r_A Hypothetical isochorism 27.9 94 0.0032 25.4 5.6 38 259-298 128-165 (199)
169 4h17_A Hydrolase, isochorismat 27.7 95 0.0033 25.5 5.5 36 260-297 120-155 (197)
170 2a67_A Isochorismatase family 27.6 1.2E+02 0.004 24.1 5.9 37 260-298 98-134 (167)
171 3tg2_A Vibriobactin-specific i 27.5 93 0.0032 26.2 5.5 38 259-298 134-171 (223)
172 3il3_A 3-oxoacyl-[acyl-carrier 27.5 60 0.002 29.0 4.5 28 54-81 60-87 (323)
173 4ewp_A 3-oxoacyl-[acyl-carrier 27.3 39 0.0013 30.4 3.3 30 56-85 66-96 (350)
174 3s21_A 3-oxoacyl-[ACP] synthas 27.2 66 0.0023 28.9 4.8 33 54-86 70-103 (345)
175 3hu5_A Isochorismatase family 27.1 99 0.0034 25.5 5.6 38 259-298 122-159 (204)
176 1im5_A 180AA long hypothetical 27.0 1E+02 0.0035 24.7 5.6 38 259-298 116-153 (180)
177 3lqy_A Putative isochorismatas 26.8 99 0.0034 25.1 5.5 37 259-297 109-145 (190)
178 3hb7_A Isochorismatase hydrola 26.7 1E+02 0.0035 25.4 5.6 38 259-298 116-153 (204)
179 1k8k_B ARP2, actin-like protei 26.5 48 0.0017 30.5 3.8 25 264-288 299-323 (394)
180 1u6e_A 3-oxoacyl-[acyl-carrier 26.5 77 0.0026 28.1 5.1 41 54-99 232-272 (335)
181 3s3l_A CERJ; acyltransferase, 26.5 86 0.0029 28.4 5.5 28 54-81 56-83 (357)
182 1u6e_A 3-oxoacyl-[acyl-carrier 26.5 77 0.0026 28.1 5.1 29 54-82 63-91 (335)
183 1hnj_A Beta-ketoacyl-acyl carr 26.3 59 0.002 28.6 4.2 26 55-80 219-244 (317)
184 1ted_A PKS18; thiolase fold, s 26.0 77 0.0026 29.1 5.1 27 53-79 286-312 (393)
185 1zow_A 3-oxoacyl-[acyl-carrier 25.7 66 0.0022 28.2 4.4 41 54-99 212-252 (313)
186 3il6_A 3-oxoacyl-[acyl-carrier 25.6 69 0.0023 28.5 4.6 57 262-321 239-295 (321)
187 2fsj_A Hypothetical protein TA 25.3 34 0.0012 31.0 2.5 17 1-17 21-37 (346)
188 3euo_A Type III pentaketide sy 24.9 99 0.0034 28.3 5.6 28 57-84 86-113 (379)
189 1cza_N Hexokinase type I; stru 24.8 1E+02 0.0035 32.1 6.2 67 2-80 527-601 (917)
190 3irv_A Cysteine hydrolase; str 24.7 1.1E+02 0.0038 25.8 5.6 38 259-298 135-172 (233)
191 1yac_A Ycacgp, YCAC gene produ 24.7 1.2E+02 0.0042 25.1 5.7 39 258-298 100-138 (208)
192 3i33_A Heat shock-related 70 k 24.5 36 0.0012 31.2 2.5 21 1-21 23-43 (404)
193 3txy_A Isochorismatase family 24.3 1.2E+02 0.0041 24.9 5.6 38 259-298 122-159 (199)
194 1zow_A 3-oxoacyl-[acyl-carrier 24.2 99 0.0034 27.0 5.3 29 54-82 53-81 (313)
195 3oqp_A Putative isochorismatas 23.8 1.1E+02 0.0037 25.5 5.2 37 259-297 105-141 (211)
196 2ebd_A 3-oxoacyl-[acyl-carrier 23.7 93 0.0032 27.1 5.0 29 54-82 52-80 (309)
197 3s3l_A CERJ; acyltransferase, 23.0 54 0.0018 29.8 3.3 26 54-79 238-263 (357)
198 3kl2_A Putative isochorismatas 23.0 1.3E+02 0.0043 25.4 5.5 37 260-298 148-184 (226)
199 1ub7_A 3-oxoacyl-[acyl-carrier 23.0 61 0.0021 28.6 3.7 27 54-80 220-246 (322)
200 3a9l_A Poly-gamma-glutamate hy 22.9 63 0.0022 27.4 3.4 36 265-302 111-146 (216)
201 2ebd_A 3-oxoacyl-[acyl-carrier 22.8 50 0.0017 29.0 3.0 26 55-80 211-236 (309)
202 2fq1_A Isochorismatase; ENTB, 22.8 1.2E+02 0.0041 26.4 5.6 39 258-298 140-178 (287)
203 3cet_A Conserved archaeal prot 22.4 1.5E+02 0.0052 26.8 6.1 23 2-25 1-23 (334)
204 3by5_A Cobalamin biosynthesis 22.4 2E+02 0.007 22.8 6.3 48 54-111 24-71 (155)
205 3d2f_A Heat shock protein homo 22.2 44 0.0015 33.5 2.7 21 1-21 2-22 (675)
206 3e1h_A PKSIIINC, putative unch 22.0 1.2E+02 0.004 28.8 5.6 28 57-84 115-142 (465)
207 1u0m_A Putative polyketide syn 21.7 88 0.003 28.5 4.6 26 54-80 253-278 (382)
208 2p0y_A Hypothetical protein LP 21.6 47 0.0016 30.3 2.5 34 261-297 9-42 (341)
209 1tqy_B Actinorhodin polyketide 21.4 68 0.0023 29.7 3.8 25 56-80 281-305 (415)
210 4fo0_A Actin-related protein 8 21.4 1.2E+02 0.004 29.4 5.7 73 241-318 479-566 (593)
211 3gbc_A Pyrazinamidase/nicotina 21.3 1.5E+02 0.0053 23.9 5.6 37 259-297 121-157 (186)
212 3ov2_A Curcumin synthase; type 21.0 1.3E+02 0.0044 27.7 5.6 26 56-81 106-131 (393)
213 3eb9_A 6-phosphogluconolactona 20.9 2E+02 0.0069 24.8 6.5 37 246-282 20-56 (266)
214 1ub7_A 3-oxoacyl-[acyl-carrier 20.8 98 0.0033 27.2 4.6 29 54-82 52-80 (322)
215 3fst_A 5,10-methylenetetrahydr 20.8 1.8E+02 0.0063 25.8 6.3 53 54-115 39-91 (304)
216 1cxq_A Avian sarcoma virus int 20.7 2.8E+02 0.0095 21.1 6.9 44 260-307 64-109 (162)
217 4gni_A Putative heat shock pro 20.7 1E+02 0.0035 28.2 4.9 48 53-106 324-371 (409)
218 3ot4_A Putative isochorismatas 20.6 1.6E+02 0.0054 25.0 5.7 38 259-298 155-192 (236)
219 1hnj_A Beta-ketoacyl-acyl carr 20.5 1.3E+02 0.0046 26.2 5.4 32 54-85 53-85 (317)
No 1
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.8e-68 Score=501.25 Aligned_cols=320 Identities=29% Similarity=0.513 Sum_probs=292.8
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+|||||||++++++||++++ +++++++.+ ++.+|+|..|+.+.++|.+.+.+++++||+++|++++|||.|+|+
T Consensus 6 M~iLgIdts~~~~svAl~~~~--~i~~~~~~~---~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav~ 80 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIIDES--RILAMESSM---YRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFS 80 (334)
T ss_dssp CEEEEEECSSSEEEEEEEESS--CCCEEEEEE---CCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred ceEEEEECCCcCeEEEEEECC--EEEEEEEEe---eccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 899999999999999999988 688865432 466899999999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceEEeeeccC
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLD 160 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~~ 160 (339)
.|||+||++|+|+.++|+|+..+++|+++|+||++|++++++.+++. +| +++++|||++.++.+++ +++++++++.+
T Consensus 81 ~gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~~s~~~-~p-l~L~vsGg~t~l~~~~~-~~~~~lg~t~d 157 (334)
T 3eno_A 81 MGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRVTGAI-DP-VMLYVSGGNTQVIAHVN-GRYRVLGETLD 157 (334)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHHHHTCS-SC-EEEEESSSCEEEEEECS-SBEEEEEEBSS
T ss_pred cCCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHhcCCCC-CC-EEEEEECCCcEEEEEeC-CEEEEeccCCC
Confidence 99999999999999999999999999999999999999999988873 56 89999999999988864 89999999999
Q ss_pred CcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHH
Q psy9394 161 DAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240 (339)
Q Consensus 161 ~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa 240 (339)
+|+||+||++|++||+.||||+++|++|.++++ .+++|+++ .+++|+|+++++++.+.+.+. .+++|||+
T Consensus 158 ~S~G~~fD~vA~~LGl~y~g~~~le~lA~~g~~-~~~~~~~~---~~~~~sfsgl~~~v~~~l~~g------~~~~diAa 227 (334)
T 3eno_A 158 IGIGNMIDKFAREAGIPFPGGPEIEKLAMKGTK-LLDLPYSV---KGMDTAFSGILTAALQYLKTG------QAIEDISY 227 (334)
T ss_dssp CCHHHHHHHHHTTTTCCSCHHHHHHTTGGGCCS-CCCCCCCE---ETTEECCHHHHHHHHHHHHTT------CCHHHHHH
T ss_pred ccHHHHHHHHHHHcCCCCCCHHHHHHHHhcCCC-CCCCceec---cCceEchHHHHHHHHHHHHcC------CCHHHHHH
Confidence 999999999999999999999999999999876 44455443 245899999999888887653 57899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 241 ~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
+||+++++.++++++++.++++.++||++||||+|+.++++|.+++...|+++|+||..||||||+||||+++.+++.|.
T Consensus 228 sfq~~l~~~l~~~~~~a~~~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~ 307 (334)
T 3eno_A 228 SIQETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred CCCCCcccccccCCCCCCC
Q psy9394 321 KSESNYEFNIKPQWKINKI 339 (339)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~ 339 (339)
+.+. .++++.|+|+++++
T Consensus 308 ~~~~-~~~~~~~~~~~~~~ 325 (334)
T 3eno_A 308 RMSV-EETAVNPRFRIDEV 325 (334)
T ss_dssp CCCG-GGCCCCTTCCGGGS
T ss_pred CCCc-ccCccCCCCChhhc
Confidence 8773 48999999999875
No 2
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=100.00 E-value=9.3e-63 Score=463.88 Aligned_cols=319 Identities=32% Similarity=0.559 Sum_probs=287.7
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|++||||||++++++||++++ ++++.+..++ +.+++|..|+.+.++|.+.+.++++++|+++|++++|||.|+++
T Consensus 1 M~iLgIdts~~~~~val~~~g--~i~~~~~~~~---~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~ 75 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSED--KVLANVFDTL---TTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFS 75 (330)
T ss_dssp CCEEEEECSSSEEEEEEECSS--CEEEEEEEEC---CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEE
T ss_pred CEEEEEEccCCCeEEEEEECC--EEEEEEEEEe---ecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEE
Confidence 899999999999999999988 6887654332 46788999999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceEEeeeccC
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLD 160 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~~ 160 (339)
.|||+||++|+|+.++|+|+..+++|+++|+||+||++++++ +++. +| +++++|||+++++.++ .++++.++.+.+
T Consensus 76 ~GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~-~~~~-~~-~~l~v~GG~t~~i~~~-~~~~~~lg~t~d 151 (330)
T 2ivn_A 76 QGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FGVK-DP-VGLYVSGGNTQVLALE-GGRYRVFGETLD 151 (330)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG-GTCC-SC-EEEEECSSCEEEEEEE-TTEEEEEEEBSS
T ss_pred CCCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh-cCCC-CC-eEEEEcCCCceEEEEc-CCeEEEEEeecC
Confidence 999999999999999999999999999999999999999999 8763 56 7899999999999886 689999999999
Q ss_pred CcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHH
Q psy9394 161 DAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240 (339)
Q Consensus 161 ~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa 240 (339)
.|+||+||++|++||+.+++++++|++|.++++ .+.+|.++. +|+|+|+++++++.+.+.+. ..+++|||+
T Consensus 152 ds~Gr~fD~vA~~LGl~~~~~~~le~lA~~g~~-~~~~p~~i~---~~~fsfs~l~~~v~~~~~~g-----~~~~~diAa 222 (330)
T 2ivn_A 152 IGIGNAIDVFARELGLGFPGGPKVEKLAEKGEK-YIELPYAVK---GMDLSFSGLLTEAIRKYRSG-----KYRVEDLAY 222 (330)
T ss_dssp SCHHHHHHHHHHHHTCCSCHHHHHHHHHHTCCS-CCCCCCCEE---TTEECCHHHHHHHHHHHHHT-----CSCHHHHHH
T ss_pred chhHHHHHHHHHHhCCCCCcHHHHHHHhhcCCC-cCCCCcccC---CCeEehHHHHHHHHHHHHcC-----CCCHHHHHH
Confidence 999999999999999999999999999998875 344565542 46899999998888777642 146899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 241 ~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
+||+++++.+.++++++.++++.++|||+||||+|+.++++|.+++++.|+++|+||..||||||+||||+++.+++.|.
T Consensus 223 ~fq~~l~~~l~~~~~~~~~~~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~~ 302 (330)
T 2ivn_A 223 SFQETAFAALVEVTERAVAHTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGI 302 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999998778999999988899999999999999998887
Q ss_pred CCCCCc-ccccccCCCCCCC
Q psy9394 321 KSESNY-EFNIKPQWKINKI 339 (339)
Q Consensus 321 ~~~~~~-~~~~~~~~~~~~~ 339 (339)
+.+ + ++++.|+|+++++
T Consensus 303 ~~~--~~~~~~~p~~~~~~~ 320 (330)
T 2ivn_A 303 SFR--LEETIVKQKFRTDEV 320 (330)
T ss_dssp CCC--GGGGSCCTTCCGGGS
T ss_pred CCC--cccCccCCCCCccce
Confidence 766 5 7999999999864
No 3
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=100.00 E-value=1.9e-61 Score=483.39 Aligned_cols=319 Identities=31% Similarity=0.528 Sum_probs=292.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+|||||||++++++||++++ +++++..+. ..+.+|||.+|+.++++|.+.+.++++++|++ ++++|||.|||+
T Consensus 6 m~iL~i~ts~~~~~~al~~~~-~~~~~~~~~---~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~ 79 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSD-GEVLFNKTI---MYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFS 79 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETT-SCEEEEEEE---ECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEE
T ss_pred ceEEEEEcCccceEEEEEECC-CeEEEEEEE---eecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEe
Confidence 799999999999999999987 678887643 35789999999999999999999999999999 889999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceEEeeeccC
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLD 160 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~~ 160 (339)
.|||++|++|+|+.+||+||..+++|+++|+||+||++++++++++ .+| +++++||||++++.+.+ +++++++.+.+
T Consensus 80 ~gPG~~~~l~vg~~~ak~la~~~~~p~~~v~h~~aH~~~~~~~~~~-~~p-~~l~vsGg~t~~~~~~~-~~~~~lg~t~d 156 (540)
T 3en9_A 80 QGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEA-EDP-LTLYVSGGNTQVIAYVS-KKYRVFGETLD 156 (540)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHHHHHSSC-SSC-EEEEECSSCEEEEEEET-TEEEEEEEBSS
T ss_pred cCCCchhhHHHHHHHHHHHHHHhCCCeeEeccHHHHHHHHHHhcCC-CCC-cEEEEcCCCcEEEEEeC-CceEEEeeccc
Confidence 9999999999999999999999999999999999999999999886 367 99999999999998875 79999999999
Q ss_pred CcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHH
Q psy9394 161 DAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIAR 240 (339)
Q Consensus 161 ~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa 240 (339)
+|+|++||++|++||++||||+++|.+|.+|+. .+++|++. .+++|+|+++++++.+.+++. .+++|||+
T Consensus 157 ~s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~~-~~~~p~~~---~~~~~sfsgl~~~~~~~~~~~------~~~~~ia~ 226 (540)
T 3en9_A 157 IAVGNCLDQFARYVNLPHPGGPYIEELARKGKK-LVDLPYTV---KGMDIAFSGLLTAAMRAYDAG------ERLEDICY 226 (540)
T ss_dssp SCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCCC-CCCCCCCE---ETTEECCHHHHHHHHHHHHTT------CCHHHHHH
T ss_pred hHhHHHHHHHHHHcCCCCCCHHHHHHHHHcCCc-cCcCCCCC---CCcceecHHHHHHHHHHHHcC------CCHHHHHH
Confidence 999999999999999999999999999999873 45556553 356899999999998887643 57899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 241 GFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 241 ~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
+||+++++.++++++++.++++.++||++||||+|+.|+++|.+++.+.|+++|+||+.+|+|||+|+|++++..++.|.
T Consensus 227 ~fq~~~~~~l~~~~~~a~~~~~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~~~~~~~~g~ 306 (540)
T 3en9_A 227 SLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGR 306 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999899999999988999999999999999999998
Q ss_pred CCCCCcccccccCCCCCCC
Q psy9394 321 KSESNYEFNIKPQWKINKI 339 (339)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~ 339 (339)
+++. .+..+.|+|+++++
T Consensus 307 ~s~l-~~~~v~pr~~~dev 324 (540)
T 3en9_A 307 WMSL-DETKIIPNYRTDMV 324 (540)
T ss_dssp CCCG-GGCCCCTTCCSTTS
T ss_pred CCcc-cccccccccccccc
Confidence 8874 58999999998864
No 4
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=100.00 E-value=1.7e-47 Score=377.53 Aligned_cols=294 Identities=16% Similarity=0.152 Sum_probs=223.2
Q ss_pred EEEEecCCCceeEEEEECCCCceeE---EEEeeecccccccCCccchHHHHHHHHH-H-HHHHHHHHHhCCCCCCCcCEE
Q psy9394 3 ILGIESSCDDSGLALYDTHIKNLRS---HVICSQNLVHKEYGGVVPELAARTHIQT-I-IPLLSKLLKNSNLELKKIDII 77 (339)
Q Consensus 3 iLgidts~~~~~~al~~~~~~~i~~---~~~~~~~~~~~~~~G~~~~~~~~~~~~~-l-~~~i~~~l~~~~i~~~did~i 77 (339)
.|||+...||.++||++|| +|++ +||++|+| |... + ..+|++||+++|++++|||.|
T Consensus 12 ~~g~~~~~HDsaAaLv~DG--~ivaA~eEERftR~K----------------h~~~~fP~~AI~~cL~~AGi~~~DID~V 73 (576)
T 3ven_A 12 LNGWPRDFHDASAALLVDG--RIAAFAEEERLTRKK----------------HGYNTAPVQAAAFCLAQAGLTVDDLDAV 73 (576)
T ss_dssp EECCSSSCCCCEEEEEETT--EEEEEEEHHHHHCCT----------------TCTTSCCHHHHHHHHHHHTCCGGGCSEE
T ss_pred hccccccCCCceEEEEECC--EEEEEEEEEEeeeec----------------ccCCCCCHHHHHHHHHHcCCCHHHCcEE
Confidence 4678888999999999999 7886 46888765 3222 2 257999999999999999999
Q ss_pred EEeCC-CCCCchh-------HHHHHH----HHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCC---eeE
Q psy9394 78 AYTRG-PGLPGSL-------LVGSSI----ACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGG---HTQ 142 (339)
Q Consensus 78 a~~~g-PG~~t~l-------r~g~~~----ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg---~~~ 142 (339)
|++.+ |+....+ |..... ++.++...+.|++.|+||.+||+|+++.|+| ++++++++||+ ++.
T Consensus 74 a~~~~~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v~HHlaHAaSAf~~Spf--e~aaVLvvDG~Ge~~T~ 151 (576)
T 3ven_A 74 AFGWDLPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFVQHHLAHAASAYYFSGE--DRGAVLIVDGQGEEECV 151 (576)
T ss_dssp EESSCHHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEECCHHHHHHHHHHTTSSC--SEEEEEEECSCSSSEEE
T ss_pred EEECCCccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEecCHHHHHHHHhhhcCCC--CceEEEEEeCCCCCceE
Confidence 99999 8643221 211111 2233333467999999999999999999998 48999999997 677
Q ss_pred EEEecCCcceEEeeec-cCCcchhhhHHHHhHcCCCCCcHHHHHhccccCCCC-cccCCCccccCCCeee----------
Q psy9394 143 LIKVNSIGNYFLLGET-LDDAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPN-IYKFPRPMLYTNNFNF---------- 210 (339)
Q Consensus 143 ~~~~~~~~~~~~~~~~-~~~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~-~~~~~~~l~~~~~~~~---------- 210 (339)
++...+.++++++++. .++|+|.+|+++|++|||.+++|+++|+||+||+|. .+ ++..+...+...+
T Consensus 152 ~v~~~~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~~~gE~KVMGLApYG~p~~~~-~~~l~~~dg~f~~~~~~~~~~~~ 230 (576)
T 3ven_A 152 TLAHAEGGKITVLDTVPGAWSLGFFYEHVSEYTGLGGDNPGKLMGLAAHGTTVDET-LSAFAFDSDGYRLNLIDPQARDP 230 (576)
T ss_dssp EEEEEETTEEEEEEEEEGGGCHHHHHHHHHHHTTSCTTCHHHHHHHHTTSCCSCTT-TTTEEEETTEEEETTSCTTCCCT
T ss_pred EEEEeeCCEEEEEEEeccCChHHHHHHHHHHHcCCCCCCccceeEEcCCCCCchhh-hHhhccCCCceeeeccccccccc
Confidence 7776667899999885 789999999999999999999999999999999984 33 3321211111122
Q ss_pred ----ecchHHHH----HHHH-----------HHh-hc-----cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q psy9394 211 ----SFSGLKTS----VLNV-----------IKN-IK-----LDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINK 265 (339)
Q Consensus 211 ----~~~~l~~~----~~~~-----------~~~-~~-----~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~ 265 (339)
+|+++... .... +.. .+ +++..+.+.|||++||+++++.++++++++.+++++++
T Consensus 231 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~R~~~~~~~~~~~~~~~dIAasfQ~~l~~~L~~~~~~a~~~tg~~~ 310 (576)
T 3ven_A 231 EDWDEYSVTERAWFAHLERIYRLPPNEFVRRYDPAKGRVVRDTRRDPYEYRDLAATAQAALERAVFGLADSVLARTGERT 310 (576)
T ss_dssp TSSSSHHHHHHHHHHHHHHHSSSCCCCEEEEEETTTTEEEEEESSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred cccccccccccccccchhcccccchHHHHHHhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 33322110 0111 000 00 11223458999999999999999999999999999999
Q ss_pred EEEEcchhhhHHHHHHHHHHHHhCCc-EEEccCCCCCChhHHHHHHHHHHHHHhcCCC
Q psy9394 266 LVVVGGVGANKQLRKKLNILKKQYNY-TVFYPKKEFCTDNGAMIAFAGAMRIENNYKS 322 (339)
Q Consensus 266 v~laGGVa~N~~l~~~l~~~l~~~~~-~v~~~~~~~~~D~G~aiG~a~~~~~~~~~~~ 322 (339)
|||+||||+|+.||++|.+. .++ ++|+|| +|||||+||||+++..++.|...
T Consensus 311 l~LaGGVa~N~~L~~~l~~~---~~~~~v~vpp--~~~D~G~aiGqA~~a~~~~g~~~ 363 (576)
T 3ven_A 311 LFVAGGVGLNATMNGKLLTR---STVDKMFVPP--VASDIGVSLGAAAAVAVELGDRI 363 (576)
T ss_dssp EEEESGGGGCHHHHHHHHTS---TTCSEEECCT--TCSGGGHHHHHHHHHHHHTTCCC
T ss_pred EEecchHHHHHHHHHHHHHh---cCCCeEEeCC--CCCchHHHHHHHHHHHHHcCCCC
Confidence 99999999999999998764 356 899997 79999999999999988888654
No 5
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=100.00 E-value=1.5e-37 Score=316.70 Aligned_cols=256 Identities=18% Similarity=0.217 Sum_probs=204.0
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHh
Q psy9394 38 KEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117 (339)
Q Consensus 38 ~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa 117 (339)
++|+||+.+..+.++++.....+..+++ + +++.|++|.||+|++ ..++..++.|++.|+||+||+
T Consensus 424 s~hiGdl~~~~~~~~~~~~~~~~~~l~~---~---~p~~i~~D~HP~y~s---------t~~a~~~~~p~~~VQHHhAH~ 488 (761)
T 3vth_A 424 SHHIGDLDNEKAFNYYIEQIERYKKLFR---V---DPEVVAHDMHKGYLS---------TQYAKSLDLPKIEVQHHHAHI 488 (761)
T ss_dssp CCCCBCCCSHHHHHHHHHHHHHHHHHTT---C---CCSEEEEESCTTSHH---------HHHHHHSSSCEEEECHHHHHH
T ss_pred ecCccCCCCHHHHHHHHHHHHHHHHHhC---C---CCCEEEEeCCCCchH---------HHHHHhcCCCeEEecHHHHHH
Confidence 4699999999998888887777777776 6 679999999999974 345666789999999999999
Q ss_pred hhccccCCCCCCcEEEEEEeCC---------eeEEEEecCCcceEE----------------------------------
Q psy9394 118 LSPFLSNNSLTFPFIALLVSGG---------HTQLIKVNSIGNYFL---------------------------------- 154 (339)
Q Consensus 118 ~s~~~~s~~~~~~~~~l~~dGg---------~~~~~~~~~~~~~~~---------------------------------- 154 (339)
+|+++++++ ..|++++++||. ..+++..+.. +++.
T Consensus 489 as~mae~~~-~~~vlg~a~DGtGyG~dg~iWGGE~l~~~~~-~~~r~~~l~~~~lpGgd~a~~~p~r~a~~~l~~~~~~~ 566 (761)
T 3vth_A 489 ASCMAEHNL-DEKVIGIAYDGTGYGTDGNVWGAEILVCDLK-SFERIAHLKYKPLPGNELAIKKIYRTALGFIFDNISFY 566 (761)
T ss_dssp HHHHHHTTC-CSCEEEEEEEEEEECTTSSEEEEEEEEECSS-CEEEEEEECCEEEESTTHHHHCHHHHHHHHHGGGGGGG
T ss_pred HHHHHhcCC-CCceEEEEEeCCCcCCCCCeeeeEEEEEeCC-ceEEEeccccCCCCChhHHHHHHHHHHHHHHhhhhhhh
Confidence 999999987 369999999972 1344443321 1110
Q ss_pred ----------------------eeeccCCcchhhhHHHHhHcCC----CCCcHHH--HHhccccCCCCcccCCCccccCC
Q psy9394 155 ----------------------LGETLDDAAGDTFDKIAKMLDL----GYPGGPE--ISLISEFGDPNIYKFPRPMLYTN 206 (339)
Q Consensus 155 ----------------------~~~~~~~s~G~~~d~va~~LG~----~~~gg~~--le~lA~~g~~~~~~~~~~l~~~~ 206 (339)
++.+.++|+||+||++|++||+ +||||++ +|.+|..++. .+ |+++. .+
T Consensus 567 ~~~~~~~~~~~~~~l~~~~~~~~n~p~tSS~GRLFDavAalLGl~~~~~YEGqaA~~LEalA~~~~~-~~--p~~i~-~~ 642 (761)
T 3vth_A 567 KNFVEQVDSRELDIILKQIDRKINTAYVSSMGRFFDAVAALIGVRKEVLFEGQAAMELESLMAESEE-YY--EYEIL-KE 642 (761)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHTSSEEEECCHHHHHHHHHHHTTSCSSCSSTTHHHHHHHHTCCCCCC-CC--CCCCE-ES
T ss_pred hhhhhhCCHHHHHHHHHHHHcCCCCCCCCcchhhHHHHHHHcCCCCCCccccchHHHHHHHHhcCCC-CC--Cceec-CC
Confidence 1235679999999999999999 6899986 5899976543 33 44432 12
Q ss_pred C-eeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHH
Q psy9394 207 N-FNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNIL 285 (339)
Q Consensus 207 ~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~ 285 (339)
+ .+++++++..++.+.+.. ..+++|||++||+++++.++++++++.+++++++|+|+||||+|+.|+++|.++
T Consensus 643 ~~~~ld~~~l~~~~~~~l~~------g~~~~dIAasFq~ala~~L~~~~~~a~~~~g~~~VvLsGGVa~N~~Lr~~L~~~ 716 (761)
T 3vth_A 643 DRYVIDPELILRQIYEDYMK------GFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSFQNRYLLRRLIEK 716 (761)
T ss_dssp SSEEECHHHHHHHHHHHHHH------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGSHHHHHHHHHH
T ss_pred CcceecHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHHHHHHHHHHHH
Confidence 2 257777774444433332 257899999999999999999999999999999999999999999999999999
Q ss_pred HHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 286 KKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 286 l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
+++.|+++++|+..||||||+|+||+.+...+.+.
T Consensus 717 l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~~ 751 (761)
T 3vth_A 717 LSLSGFEVYSNSKVPCNDGGISLGQAVIANKILEG 751 (761)
T ss_dssp HHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHTS
T ss_pred HHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988655544
No 6
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=100.00 E-value=3.2e-38 Score=315.98 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=201.7
Q ss_pred ccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHH
Q psy9394 37 HKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGH 116 (339)
Q Consensus 37 ~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aH 116 (339)
-++|+||+.+..+.++++.....+..+++ + +++.|++|.||+|++ ..++...++|++.||||+||
T Consensus 326 ~SqhiGdl~~~~~~~~~~~~~~~~~~l~~---~---~p~~i~~D~HP~y~s---------t~~a~~~~~~~~~vQHHhAH 390 (657)
T 3ttc_A 326 LSQHLGDLSDDGIQTQWREALRLMQNIYN---F---TPQYVVHDAHPGYVS---------CQWASEMNLPTQTVLHHHAH 390 (657)
T ss_dssp ECCCCCCTTSTTHHHHHHHHHHHHHHHTT---C---CCSEEEEESCTTCHH---------HHHHTTSCSCEEEECHHHHH
T ss_pred EccCccCCCCHHHHHHHHHHHHHHHHHhC---C---CCCEEEEcCCCCchH---------HHHHHHcCCCeEEeeHHHHH
Confidence 35799999999999888887777777776 6 679999999999974 23666678999999999999
Q ss_pred hhhccccCCCC--CCcEEEEEEeCC---------eeEEEEecCCcceEE-------------------------------
Q psy9394 117 LLSPFLSNNSL--TFPFIALLVSGG---------HTQLIKVNSIGNYFL------------------------------- 154 (339)
Q Consensus 117 a~s~~~~s~~~--~~~~~~l~~dGg---------~~~~~~~~~~~~~~~------------------------------- 154 (339)
++|++.+++.. ..|++++++||- ..+++..+.. .++.
T Consensus 391 ~~a~~ae~~~~~~~~~vlg~~~DG~G~G~Dg~iWGGE~l~~~~~-~~~R~~hl~~~~lpGGd~a~~~p~R~a~~~l~~~~ 469 (657)
T 3ttc_A 391 AAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYR-ECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFV 469 (657)
T ss_dssp HHHHHHHTTCCTTCCCEEEEEEEEEEECGGGCEEEEEEEEECSS-CEEEEEESCCEECTTGGGGGTCTHHHHHHHHHHHC
T ss_pred HHHHHHhcCCccCCCCEEEEEEeCCccCCCCCeeeeEEEEEECC-ccEEEeecccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999998862 369999999972 1344443310 1100
Q ss_pred ---------------------------eeeccCCcchhhhHHHHhHcCCC-----CCcHHH--HHhccccCCCCcccCCC
Q psy9394 155 ---------------------------LGETLDDAAGDTFDKIAKMLDLG-----YPGGPE--ISLISEFGDPNIYKFPR 200 (339)
Q Consensus 155 ---------------------------~~~~~~~s~G~~~d~va~~LG~~-----~~gg~~--le~lA~~g~~~~~~~~~ 200 (339)
++.+.++|+||+||++|++||+. ||||++ +|.+|..+++..+++|+
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~tSS~GRLFDavAalLGl~~~~~~YEGqaA~~LEalA~~~~~~~~~lp~ 549 (657)
T 3ttc_A 470 PEWQNYPETASVAAANWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTM 549 (657)
T ss_dssp TTGGGSGGGHHHHHSCTHHHHHHHHTTSSCCEEEEHHHHHHHHHHHHTCSCSSCSSTTHHHHHHHHHHHTCCCCCCCCCC
T ss_pred cccccchhhhhcCHHHHHHHHHHHHcCCCCcccCccchHHHHHHHHcCCCCccCccCchhHHHHHHHHhhCCCccCCcee
Confidence 12356899999999999999995 899986 58999777654455555
Q ss_pred ccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHH
Q psy9394 201 PMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRK 280 (339)
Q Consensus 201 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~ 280 (339)
++. +.+++|+++ +..+++. ..++++||++||+++++.++++++++.+++++++|+|+||||+|+.|++
T Consensus 550 ~i~---~~~ld~s~l---~~~ll~~------g~~~~dIAasFh~ala~~L~~~~~ra~~~~g~~~VvLsGGV~~N~~Lre 617 (657)
T 3ttc_A 550 PRV---DNQLDLATF---WQQWLNW------QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRA 617 (657)
T ss_dssp CEE---TTEECHHHH---HHHHHTC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESGGGGCHHHHH
T ss_pred ecc---CCcccHHHH---HHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHHHHHHH
Confidence 542 235777666 5555543 3689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHH
Q psy9394 281 KLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRI 316 (339)
Q Consensus 281 ~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~ 316 (339)
+|.++++ |+++++|+..||||||+|+||+.+...
T Consensus 618 ~L~~~l~--g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 618 RLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHTT--TSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHhC--CCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 9999885 899999999999999999999998743
No 7
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.3e-37 Score=316.89 Aligned_cols=254 Identities=17% Similarity=0.259 Sum_probs=195.6
Q ss_pred cccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHh
Q psy9394 38 KEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHL 117 (339)
Q Consensus 38 ~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa 117 (339)
++|+||+.+..+.++++.....+..+++ ++ ..+.|++|.||+|.++ .+||+++..+++|++.|+||+||+
T Consensus 422 s~hiGdl~~~~~~~~~~~~~~~~~~l~~---~~--p~~~i~~D~HP~y~st-----~~Ak~lA~~~~iPli~VqHH~AHa 491 (772)
T 4g9i_A 422 SQYIGNTGKVEVLEFMREAIAHFRKILR---VK--NLDLIIADLHPAYNTT-----KLAMEMANELDVELLQVQHHYAHI 491 (772)
T ss_dssp CSCCCCSCSHHHHHHHHHHHHHHHTTSC---SS--CSSCEEEESCTTCHHH-----HHHHHHHTTTTCCCCEECSHHHHT
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHhhC---CC--CCCEEEEeCCCCcHHH-----HHHHHHHHhcCCCeeeehHHHHHH
Confidence 4799999999888777776656655544 53 2378999999999864 579999999999999999999999
Q ss_pred hhccccCCCCCCcEEEEEEeCCe---------eEEEEecCCcceEE----------------------------------
Q psy9394 118 LSPFLSNNSLTFPFIALLVSGGH---------TQLIKVNSIGNYFL---------------------------------- 154 (339)
Q Consensus 118 ~s~~~~s~~~~~~~~~l~~dGg~---------~~~~~~~~~~~~~~---------------------------------- 154 (339)
+++++++++ .+++++++||.. .+++..+. .+++.
T Consensus 492 aS~~~esg~--~~~l~LalDGsG~G~dgtiWgGE~L~~d~-~~~eRlg~l~~l~l~ggDaA~~~p~r~a~~ll~~~~G~~ 568 (772)
T 4g9i_A 492 ASVMAEKNL--DSVIGIALDGVGYGTDGNTWGGEVLYLGY-EDVERLAHIDYYPLPGGDLASYYPLRALMGILSKVYSID 568 (772)
T ss_dssp HHHHHHTTC--CCCEEEECCSSEEETTTEEEESEEEECCS-SSCEECCCBCCEEESSHHHHHHSTHHHHHHHHTTTSCHH
T ss_pred HHHHHhcCC--CCeEEEEEEEeCCCCCCeEeeeEEEEecC-cceEEeeeeeecCcccchhhhhhHHHHHHHHHhhcCCch
Confidence 999999997 478999999832 12222211 11110
Q ss_pred ----------------------------------eeeccCCcchhhhHHHHhHcCC----CCCcHHHH--HhccccCCCC
Q psy9394 155 ----------------------------------LGETLDDAAGDTFDKIAKMLDL----GYPGGPEI--SLISEFGDPN 194 (339)
Q Consensus 155 ----------------------------------~~~~~~~s~G~~~d~va~~LG~----~~~gg~~l--e~lA~~g~~~ 194 (339)
++.+.++|+||+||+++.+||+ +|||+++| |.+|..+..
T Consensus 569 ~i~~~~k~~~~a~~~~~~~~~~e~~~l~~~l~~gin~p~tSS~GRlFDavAallGl~~~~sYEGqaAm~LE~la~~~~~- 647 (772)
T 4g9i_A 569 ELEGVINRCCPKAVESLKYGKVEFNVVLNQLAKGINTAYASSTGRVLDAIAVLLNVAYRRHYEGEPAMKLESFAFKGKN- 647 (772)
T ss_dssp HHHHHHTTSCCGGGTTSSSCSHHHHHTHHHHHTTSSCEEEEEHHHHHHHHHHSSSSCCSCCSSSCHHHHHHHHHHTCCS-
T ss_pred HHHHHHHhcChhhccCcccchHHHHHHHHHHhcCCCCccccccchhhHHHHHHcCCcccccccchhhHHHHHhhhhccc-
Confidence 0113457999999999999999 58898876 677765543
Q ss_pred cccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhh
Q psy9394 195 IYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGA 274 (339)
Q Consensus 195 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~ 274 (339)
...++.++. +..+++.++ +..+++.. ...++.|||++||.++++.++++++++.+++|+++||||||||+
T Consensus 648 ~~~~~~~~~---~~~id~~~l---~~~~~~~l----~~~~~~dIAasfQ~al~~~L~~~~~~a~~~tg~~~VvLSGGVa~ 717 (772)
T 4g9i_A 648 DLKFEVPVE---GELIRVEEL---FQSILEAI----EGASPADIAYSAHLALARAFAHTAVERAREFGVKNVALSGGVAY 717 (772)
T ss_dssp CCCCCCCCB---TTBBCHHHH---HHHHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCCCEESSTTC
T ss_pred ccCCCcCcc---ccccchHHH---HHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEEchHHH
Confidence 222333321 223454444 33333322 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHH
Q psy9394 275 NKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMR 315 (339)
Q Consensus 275 N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~ 315 (339)
|+.|++++.+.+++.|+++|+|+..||||+|+|+|||.+..
T Consensus 718 N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~ 758 (772)
T 4g9i_A 718 NELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGG 758 (772)
T ss_dssp CHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999989999999999998763
No 8
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.96 E-value=1.4e-27 Score=218.65 Aligned_cols=270 Identities=16% Similarity=0.201 Sum_probs=197.4
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|++||||.++..+++|+++++ ++|++....++ |..|+.+. ..++++++++++...+++.++++
T Consensus 1 M~~lGID~GsT~tk~av~d~~-~~il~~~~~~~--------g~~~e~a~--------~vl~~~~~~a~~~~~~~~~~a~t 63 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNG-EDIVASETISS--------GTGTTGPS--------RVLEKLYGKTGLAREDIKKVVVT 63 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETT-TEEEEEEEESC--------CTTSSHHH--------HHHHHHHHHHCCCGGGEEEEEEE
T ss_pred CeEEEEEcCccEEEEEEEECC-CeEEEEEEecC--------CCCHHHHH--------HHHHHHHHHCCCcchhccccccC
Confidence 999999999889999999998 77887654322 44454322 36788899999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceE--Eeeec
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYF--LLGET 158 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~--~~~~~ 158 (339)
.+|+. ....|++.|+|..||++++.+..+. ...++.+.|+++.++.+...+.++ .++..
T Consensus 64 ~~~~~----------------a~~~~~~~Vne~~aha~a~~~~~~~---~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~ 124 (276)
T 4ehu_A 64 GYGRM----------------NYSDADKQISELSCHARGVNFIIPE---TRTIIDIGGQDAKVLKLDNNGRLLNFLMNDK 124 (276)
T ss_dssp STTGG----------------GCCSCSEECCHHHHHHHHHHHHSTT---CCEEEEECSSCEEEEEECTTSCEEEEEEECS
T ss_pred chHHH----------------HhhCCCcccchHHHHHHHHHHhCCC---CCeEEEEcCCCceEEEEEecCceEEEEeCCC
Confidence 88763 2457889999999999999887652 345666677788877776666655 45778
Q ss_pred cCCcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHH
Q psy9394 159 LDDAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANI 238 (339)
Q Consensus 159 ~~~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~di 238 (339)
++.+.|+|+|+++++||++|++++.++..|.. +.++. +.| ++| .++.+...+.+. .+++||
T Consensus 125 ~~~g~G~f~d~~a~~l~~~~~~~~~~~~~a~~--------~~~i~--~~~-~~f--~~s~~~~~~~~~------~~~~di 185 (276)
T 4ehu_A 125 CAAGTGRFLDVMAKIIEVDVSELGSISMNSQN--------EVSIS--STC-TVF--AESEVISHLSEN------AKIEDI 185 (276)
T ss_dssp CSTTSHHHHHHHHHHHTCCGGGHHHHHTTCSS--------CCCCC--CCS-HHH--HHHHHHHHHHTT------CCHHHH
T ss_pred cCcchhhHHHHHHHHhccChhhhHHHHhcCCC--------CCCcC--Ccc-chh--hhhHHHHhhhcc------ccHHHH
Confidence 89999999999999999999987777544422 22332 122 233 366677766654 678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHH--HH
Q psy9394 239 ARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAM--RI 316 (339)
Q Consensus 239 Aa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~--~~ 316 (339)
++++|+++.+.+..++.+ ....++|+|+|||+.|..+++.+.+.+ +.++++|+ .|.++|+ +|+|.+. .+
T Consensus 186 ~a~~~~~v~~~l~~~~~~---~~~~~~vvl~GGva~n~~lr~~l~~~~---g~~~~~p~--~p~~~~A-~GAAl~A~~~~ 256 (276)
T 4ehu_A 186 VAGIHTSVAKRVSSLVKR---IGVQRNVVMVGGVARNSGIVRAMAREI---NTEIIVPD--IPQLTGA-LGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHHHHH---HCCCSSEEEESGGGGCHHHHHHHHHHH---TSCEECCS--SGGGHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh---cccCCeEEEecCccchHHHHHHHHHHH---CCCeeeCC--CcchHHH-HHHHHHHHHHH
Confidence 999999999998776544 457899999999999999999998876 77899998 5777664 6766554 34
Q ss_pred HhcCCCCCCcccccccCC
Q psy9394 317 ENNYKSESNYEFNIKPQW 334 (339)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~ 334 (339)
+...+...+.++..+|++
T Consensus 257 ~~~~~~~~~~~~~~~~~~ 274 (276)
T 4ehu_A 257 KESQKEVKNISAWSHPQF 274 (276)
T ss_dssp HHHHHTSCCCCC------
T ss_pred hhccchhhcccccccccc
Confidence 433333323566666654
No 9
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=99.90 E-value=5e-24 Score=186.67 Aligned_cols=124 Identities=23% Similarity=0.437 Sum_probs=106.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+||+||||++++++||++++ +++++.... .++|++.+.++++++|+++|++++|||.|+|+
T Consensus 2 M~iLaIdTS~~~~svAl~~~~--~~~~~~~~~----------------~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~ 63 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVND--QVISRSEVA----------------PRDHTKKVLPMVDEVLKEAGLTLQDLDALAFG 63 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSS--CEEEEEEEC----------------CSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEE
T ss_pred CEEEEEEccCcceEEEEEECC--EEEEEEEec----------------hHHHHHHHHHHHHHHHHHcCCCHHHccEEEEe
Confidence 899999999999999999988 687754221 25799999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEE
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIK 145 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~ 145 (339)
.|||+|||+|+|+.+||+|+..+++|+++|+|+++|+..+....+ ...++.++|.+..++|.
T Consensus 64 ~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~~~~~~---~~~v~~~~DARr~evY~ 125 (213)
T 3r6m_A 64 RGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHG---ATDVAVAIDARMSEVYW 125 (213)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHC---CSEEEEEECCSTTCEEE
T ss_pred cCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhhhhcCC---CcEEEEEEECCCCCeee
Confidence 999999999999999999999999999999999999998765432 13466778987655553
No 10
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=99.89 E-value=5.5e-23 Score=183.19 Aligned_cols=123 Identities=25% Similarity=0.444 Sum_probs=105.9
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+||+||||++++++||++++ +++++.+.. .++|++.+.++|+++|+++|++++|||.|+|+.
T Consensus 2 ~iL~idTs~~~~sval~~~~--~~~~~~~~~----------------~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 2 RILAIDTATEACSVALWNNG--TINAHFELC----------------PREHTQRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp EEEEEECSSSEEEEEEEETT--EEEEEEEEC----------------CSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred eEEEEECCCcCeEEEEEECC--EEEEEEhhh----------------hHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 68999999999999999988 677644322 257899999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEE
Q psy9394 82 GPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIK 145 (339)
Q Consensus 82 gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~ 145 (339)
|||+|||+|+|+.++|+|+..+++|+++|+||.+|+++++..++ ...+++++|++..++|.
T Consensus 64 GPGsftglRig~~~ak~la~~~~~Pl~~V~~l~a~a~~~~~~~~---~~~v~~~~DArrgevY~ 124 (231)
T 2gel_A 64 GPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTG---ATRVLAAIDARMGEVYW 124 (231)
T ss_dssp CSSCHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHHHHHHHHHC---CSEEEEEEEETTTEEEE
T ss_pred CCChhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHHHHHhhccC---CceEEEEEECCCCcEEE
Confidence 99999999999999999999999999999999999998876543 23466677887555554
No 11
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=99.87 E-value=6.6e-22 Score=174.17 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=102.8
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+||+||||+.++++||++++ +++ +.. .. ..++|++.+.++++++|+++|++++|||.|+|+.
T Consensus 13 ~iLaidTS~~~~sval~~~~--~~l-~~~-~~--------------~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~ 74 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRKGE--DLF-EIS-YT--------------GEKKHAEILPVVVKKLLDELDLKVKDLDVVGVGI 74 (218)
T ss_dssp CEEEEEECSSSEEEEEEETT--EEE-EEE-EE--------------SCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred eEEEEEcCCcCeEEEEEECC--EEE-EEE-ec--------------chHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 58999999999999999988 677 322 11 1368999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEE
Q psy9394 82 GPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIK 145 (339)
Q Consensus 82 gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~ 145 (339)
|||+|||+|||+.+||+|+..+++|+++|+|+++|++.... . ..++.++|.+..++|.
T Consensus 75 GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~l~a~a~~~~~--~----~~v~~~iDARr~eVY~ 132 (218)
T 2a6a_A 75 GPGGLTGLRVGIATVVGLVSPYDIPVAPLNSFEMTAKSCPA--D----GVVLVARRARKGYHYC 132 (218)
T ss_dssp CSSCHHHHHHHHHHHHHHHGGGTCCEEEECHHHHHHHTCSS--C----EEEEEEEECSTTEEEE
T ss_pred CCCchHhHHHHHHHHHHHHHHcCCCEEEeCcHHHHHhhccc--C----CcEEEEEECCCCcEEE
Confidence 99999999999999999999999999999999999987642 1 2356677987665554
No 12
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.81 E-value=2.5e-18 Score=156.76 Aligned_cols=249 Identities=14% Similarity=0.199 Sum_probs=172.1
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|++||||.++..++++|++++ +++++.... +..|+ |. +.+...++++.+ .+++..++..|+++
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~-g~i~~~~~~-------~~~~~-~~-------~~~~~~l~~l~~-~~~~~~~i~~i~~T 65 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDG-KEIVAKSLV-------AVGTG-TS-------GPARSISEVLEN-AHMKKEDMAFTLAT 65 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TEEEEEEEE-------ECCSS-CC-------HHHHHHHHHHHH-HTCCGGGCSEEEEE
T ss_pred cEEEEEEeccceEEEEEEeCC-CCEEEEEEe-------cCCCC-HH-------HHHHHHHHHHHH-cCCChhHEEEEEEe
Confidence 689999999999999999986 578875422 12232 22 223345555544 35666788888876
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceE--Eeeec
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYF--LLGET 158 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~--~~~~~ 158 (339)
|.|... +.. ...| .++|..||+.++.+..+. .. .++.+.|++++++.+++ +.+. .++..
T Consensus 66 -G~g~~~-----------~~~-~~~~--~v~Ei~ah~~ga~~~~~~--~~-~vidiGGqd~k~i~~~~-g~v~~~~mn~~ 126 (270)
T 1hux_A 66 -GYGRNS-----------LEG-IADK--QMSELSCHAMGASFIWPN--VH-TVIDIGGQDVKVIHVEN-GTMTNFQMNDK 126 (270)
T ss_dssp -STTTTT-----------TTT-TCSE--EECHHHHHHHHHHHHCTT--CC-EEEEEETTEEEEEEEET-TEEEEEEEESS
T ss_pred -Cccccc-----------hhh-cCCC--CcccHHHHHHHHHHhCCC--CC-EEEEECCCceEEEEEeC-Cceeeeccccc
Confidence 444210 111 2333 589999999887776552 23 45666788999999954 5432 35667
Q ss_pred cCCcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCe-eeecchHHHHHHHHHHhhccccccccHHH
Q psy9394 159 LDDAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNF-NFSFSGLKTSVLNVIKNIKLDSLKKEKAN 237 (339)
Q Consensus 159 ~~~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~d 237 (339)
|+.+.|+|+|.++..||++++ .++.+|..++ .|+++. ..| +| .++++..++.+. .+++|
T Consensus 127 ca~GtG~~le~~a~~lg~~~~---el~~la~~~~-----~p~~~~--~~c~vf----a~s~v~~l~~~g------~~~~d 186 (270)
T 1hux_A 127 CAAGTGRFLDVMANILEVKVS---DLAELGAKST-----KRVAIS--STCTVF----AESEVISQLSKG------TDKID 186 (270)
T ss_dssp CCTTSHHHHHHHHHHHTCCTT---THHHHHTTCC-----SCCCCC--CCSHHH----HHHHHHHHHHTT------CCHHH
T ss_pred cchhhHHHHHHHHHHhCCCHH---HHHHHHhhCC-----CCCCcc--cccchh----HhHHHHHHhhCC------CCHHH
Confidence 888899999999999999886 5666775543 234432 234 33 377777777654 67899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHH
Q psy9394 238 IARGFLDAIIDVLTFKCIAALKNTG-INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMR 315 (339)
Q Consensus 238 iAa~~q~~l~~~l~~~~~~~~~~~~-~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~ 315 (339)
|++++++.++..+.++++ ..+ .++|+++||++.|..+++.+.+.+ +.++++|+. .....++|+|.+..
T Consensus 187 i~~av~e~Va~~i~~~~~----~~~~~~~i~~~GG~a~n~~~~~~~~~~l---g~~v~~p~~---~~~~~AlGAAl~A~ 255 (270)
T 1hux_A 187 IIAGIHRSVASRVIGLAN----RVGIVKDVVMTGGVAQNYGVRGALEEGL---GVEIKTSPL---AQYNGALGAALYAY 255 (270)
T ss_dssp HHHHHHHHHHHHHHHHHH----TTCCCSSEEEESGGGGCHHHHHHHHHHH---CSCEECCGG---GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh----cCCCCCeEEEeCccccCHHHHHHHHHHH---CCCeEeCCC---cchHhHHHHHHHHH
Confidence 999999999999866654 335 378999999999999999999887 677888752 23345677777664
No 13
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=99.77 E-value=1.5e-17 Score=151.98 Aligned_cols=240 Identities=15% Similarity=0.153 Sum_probs=166.6
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+.+|||.++..+++++++++ ++++.. +.+ +. +...++.+ + .++++.|++|
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~~--~i~~~~-~~~-----------------~~---~~~~l~~l-~-----~~~~~~i~~T 70 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQDN--QRTFKT-ELT-----------------KN---IDQVVEWL-N-----QQQIEKLCLT 70 (287)
T ss_dssp -CEEEEEECSSEEEEEEECSS--CEEEEE-EEG-----------------GG---HHHHHHHH-H-----TSCCSEEEEE
T ss_pred CeEEEEEEChhhEEEEEEcCC--EEEEEE-ech-----------------HH---HHHHHHHh-c-----ccCceEEEEE
Confidence 467999999999999999877 687652 221 11 11222222 2 3478888877
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCC---CCCcEEEEEEeCCeeEEEEecCCcceEEeee
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNS---LTFPFIALLVSGGHTQLIKVNSIGNYFLLGE 157 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~---~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~ 157 (339)
|.| +..++...+.|+..++++.||+.++.+..+. .-+|.+++-+.|+++ ++.+++ ++++.++.
T Consensus 71 -G~G-----------~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~-~~f~r~~g 136 (287)
T 2ews_A 71 -GGN-----------AGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDG-QSQRRVGG 136 (287)
T ss_dssp -STT-----------HHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECS-SCEEEEEE
T ss_pred -Chh-----------HHhHhHhhCCCcceeehhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcC-CceEEcCc
Confidence 555 2344455678999999999999998875431 013776666667777 888874 57887766
Q ss_pred ccCCcchhhhHHHHhHcCC-CCCcHHHHHhccccCCCCccc------CC---CccccCCCeeeecchHHHHHHHHHHhhc
Q psy9394 158 TLDDAAGDTFDKIAKMLDL-GYPGGPEISLISEFGDPNIYK------FP---RPMLYTNNFNFSFSGLKTSVLNVIKNIK 227 (339)
Q Consensus 158 ~~~~s~G~~~d~va~~LG~-~~~gg~~le~lA~~g~~~~~~------~~---~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 227 (339)
.+ .+.|+|+|.++.+|+. +++ +|..||..++....+ ++ .++.....|. .|... ..+++
T Consensus 137 ~a-aGgGtFl~l~a~ll~~~~~~---el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as-~Fgk~----~~l~~--- 204 (287)
T 2ews_A 137 IG-TGGGMIQGLGYLLSQITDYK---QLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAA-NFGHV----LHHLD--- 204 (287)
T ss_dssp ES-CSHHHHHHHHHHHHCCCCHH---HHHHHHTTCCCTTTCEETTTC-------CCTTSEEE-TTTTG----GGCTT---
T ss_pred cc-cchhhHHHHHHHHhCCCCHH---HHHHHHHcCCccccccchhhhcCCCCCCcCcchhhH-HHHHH----HHHHh---
Confidence 55 4569999999999995 766 566678777642111 01 0111111231 23221 12222
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc-hhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 228 LDSLKKEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGG-VGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 228 ~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGG-Va~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
...+++|||+++++++.+.+..++....++.++++|+|+|| ++.|..+++.+.+.+...+.++++|+.
T Consensus 205 ---~g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~ 273 (287)
T 2ews_A 205 ---ADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVEN 273 (287)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTT
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCC
Confidence 24789999999999999999999998888899999999999 999999999999887666789998873
No 14
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=99.30 E-value=4.5e-11 Score=111.87 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=132.7
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCC------------
Q psy9394 58 PLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNN------------ 125 (339)
Q Consensus 58 ~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~------------ 125 (339)
..++++ ++.++. .+.+.|++| |-|.+- +...+....++++..++++.||+..+.+..+
T Consensus 86 ~~l~~~-~~~~~~-~~~~~i~aT-GgGa~k-------~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~ 155 (360)
T 2i7n_A 86 RFIQMG-SEKNFS-SLHTTLCAT-GGGAFK-------FEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYF 155 (360)
T ss_dssp HHHHHC--------------CEE-STTTTG-------GGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEE
T ss_pred HHHHHH-HHcCCC-ccCcEEEEE-CCcHHH-------HHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEe
Confidence 344433 333443 344666666 556541 1122223456677788999999988665331
Q ss_pred ---------------C-CCCcEEEEEEeCCeeEEEEecCCcceEEeeeccCCcchhhhHHHHhHcC-CCCCcHHHHHhcc
Q psy9394 126 ---------------S-LTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAGDTFDKIAKMLD-LGYPGGPEISLIS 188 (339)
Q Consensus 126 ---------------~-~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~~~s~G~~~d~va~~LG-~~~~gg~~le~lA 188 (339)
+ ..+|++++-+.+| ++++.+++.++++.++. +....|.|++-++.++| .+++ +|..||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~PyllVnIGsG-vSiikv~~~~~f~rvgG-~siGGGTflGL~~lLtg~~~~d---El~~lA 230 (360)
T 2i7n_A 156 ENPTNPELCQKKPYCLDNPYPMLLVNMGSG-VSILAVYSKDNYKRVTG-TSLGGGTFLGLCCLLTGCETFE---EALEMA 230 (360)
T ss_dssp ESTTCTTTCEEEEECCSSCCSEEEEEESSS-EEEEEEEETTEEEEEEE-ESCSHHHHHHHHHHHHCCCSHH---HHHHHH
T ss_pred ccccccccccccccccccCCceEEEEeCCC-cEEEEEcCCCCEEEecc-ccCccHhHHHHHHHHhCCCCHH---HHHHHH
Confidence 0 0146666555555 58888887678887754 45788999999886666 4565 566788
Q ss_pred ccCCCCccc----------CC-CccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q psy9394 189 EFGDPNIYK----------FP-RPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAA 257 (339)
Q Consensus 189 ~~g~~~~~~----------~~-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~ 257 (339)
..|+....+ ++ ..+.....+ -+|..+ ....++ ...+++|||++++.++++.+..++.-.
T Consensus 231 ~~Gd~~~vDllV~DIYg~~y~~~gL~~~~~A-SsFGk~----~~~~~~-----~~~~~eDIa~gll~sVa~~I~~lA~l~ 300 (360)
T 2i7n_A 231 AKGDSTNVDKLVKDIYGGDYERFGLQGSAVA-SSFGNM----MSKEKR-----DSISKEDLARATLVTITNNIGSIARMC 300 (360)
T ss_dssp HHCCGGGTSEEHHHHHSSCBGGGTBCTTSEE-ETTTTT----TSHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCCcccceeeecccCcccccCCCcccee-ehhhhH----hhHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777752110 11 011111112 133333 111111 236899999999999999999998877
Q ss_pred HHHhCCCeEEEEcc-hhhhHHHHHHHHHHHH---hCCcEEEccCC-CCCChhHHHHHHHHH
Q psy9394 258 LKNTGINKLVVVGG-VGANKQLRKKLNILKK---QYNYTVFYPKK-EFCTDNGAMIAFAGA 313 (339)
Q Consensus 258 ~~~~~~~~v~laGG-Va~N~~l~~~l~~~l~---~~~~~v~~~~~-~~~~D~G~aiG~a~~ 313 (339)
.+++++++|+|+|| ++.|..+.+.|.+.+. ..+.++++|+. .++ -|+|++..
T Consensus 301 A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~----GAlGAaL~ 357 (360)
T 2i7n_A 301 ALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF----GAVGALLE 357 (360)
T ss_dssp HHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH----HHHHHHHH
T ss_pred HHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH----HHHHHHHH
Confidence 88889999999999 9999999999998873 12457777763 232 24555544
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.36 E-value=0.00017 Score=64.61 Aligned_cols=240 Identities=13% Similarity=0.068 Sum_probs=126.4
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHH-HHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQT-IIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~-l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++|||.+++.+.+++++++ ++++.........+. .|...+ ...... +..+++.+....+. ++..++++
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~-~~~l~~~~~~~~~l~---~g~i~d---~~~~~~~l~~~~~~~~~~~~~---~~~~~v~t 98 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQE-GIPVAGALKWASVVK---DGLVVD---YIGAIQIVRELKAKVERLLGS---ELFQAATA 98 (272)
T ss_dssp CEEEEECCSSEEEEEEECTT-CCEEEEEEEECCCCB---TTBCTT---HHHHHHHHHHHHHHHHHHSSS---CCCEEEEE
T ss_pred EEEEEEcccceEEEEEECCC-CcEEEEEeecccccC---CCEEEc---HHHHHHHHHHHHHHHHHhcCC---ccCeEEEE
Confidence 57899999999999988765 567664322111111 122211 122222 23344555555555 44444444
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEE-eecchhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceEEeeecc
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVI-GINHLEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETL 159 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~-~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~ 159 (339)
-|..++.-+ ..+.+......+.++. -+..-.|++.+... ...+++.+.|+.+++..+.+ +.+. ....+
T Consensus 99 -vp~~~~~~~--~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~------~~~~viDiGggst~~~~~~~-g~~~-~~~~~ 167 (272)
T 3h1q_A 99 -IPPGTVGRN--AEACGHVVAGAGLELVTLVDEPVAAARALGI------NDGIVVDIGGGTTGIAVIEK-GKIT-ATFDE 167 (272)
T ss_dssp -CCSCC---C--TTHHHHHHHHTTCEEEEEECHHHHHHHHHTC------SSEEEEEECSSCEEEEEEET-TEEE-EECCB
T ss_pred -cCCCCCHHH--HHHHHHHHHHcCCeeeecccHHHHHHHHHcC------CCEEEEEECCCcEEEEEEEC-CEEE-EEecC
Confidence 454443211 1123444556677754 34555565554322 13355555577787777654 3333 33444
Q ss_pred CCcchhhhHHHHhHcCCCCCcHHHHHhccccCCCCcccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHH
Q psy9394 160 DDAAGDTFDKIAKMLDLGYPGGPEISLISEFGDPNIYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIA 239 (339)
Q Consensus 160 ~~s~G~~~d~va~~LG~~~~gg~~le~lA~~g~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diA 239 (339)
+.+..++-+.++..++.+++ ..+.+-.. ++. . ....++.
T Consensus 168 ~~Gg~~~~~~l~~~l~~~~~---~ae~~k~~-------------------~~~---~----------------~~~~~~~ 206 (272)
T 3h1q_A 168 PTGGTHLSLVLAGSYKIPFE---EAETIKKD-------------------FSR---H----------------REIMRVV 206 (272)
T ss_dssp SCCHHHHHHHHHHHHTCCHH---HHHHHHHS-------------------STT---H----------------HHHHHHH
T ss_pred CCcHHHHHHHHHHHhCCCHH---HHHHHHHh-------------------cCC---H----------------HHHHHHH
Confidence 55556666667776654422 11111000 000 0 1122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHH
Q psy9394 240 RGFLDAIIDVLTFKCIAALKNTG-INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGA 313 (339)
Q Consensus 240 a~~q~~l~~~l~~~~~~~~~~~~-~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~ 313 (339)
..+. +.+.+.+.+..++.+ +++|+|+||.+.+..+.+.+.+.+ +.++..|+ ..+-..++|++.+
T Consensus 207 ~~~~----~~i~~~i~~~l~~~~~~~~ivL~GG~a~~~~l~~~l~~~l---~~~v~~~~---~p~~a~a~Gaal~ 271 (272)
T 3h1q_A 207 RPVI----EKMALIVKEVIKNYDQTLPVYVVGGTAYLTGFSEEFSRFL---GKEVQVPI---HPLLVTPLGIALF 271 (272)
T ss_dssp HHHH----HHHHHHHHHHTTTSCSSCCEEEESGGGGSTTHHHHHHHHH---SSCCBCCS---SGGGHHHHHHHTT
T ss_pred HHHH----HHHHHHHHHHHHhcCCCCEEEEECCccchhhHHHHHHHHh---CCCccccC---ChHHHHHHHHHhc
Confidence 2222 233444455555666 789999999999999999999887 56666654 3456777887753
No 16
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=97.94 E-value=0.0019 Score=60.37 Aligned_cols=237 Identities=15% Similarity=0.156 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeC----C-CCC-CchhHHHHH--H-------------HHHHHH-hcCCCEEeecch
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYTR----G-PGL-PGSLLVGSS--I-------------ACSIAL-SINKPVIGINHL 113 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~~----g-PG~-~t~lr~g~~--~-------------ak~la~-~~~~p~~~v~h~ 113 (339)
.-+++..++++.++++++||.|++-. | |.. +| +.+|-. . .+.++. ..+.|++++-|.
T Consensus 70 ~a~av~~~l~~~~~~~~~Id~IGsHGQTv~H~P~~~~T-lQiGd~~~iA~~Tgi~vV~DFR~~DvAaGGQGAPLvP~~h~ 148 (371)
T 3qbx_A 70 AAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFT-VQIGNPALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQ 148 (371)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCEEEEEEGGGTEE-EEECCHHHHHHHHSSCEEECCSHHHHHTTSCCCCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCCccCccCCCCCCe-eecCCHHHHHHHHCcCEEeeChHHHHhccCCCCCcchHHHH
Confidence 33678899999999999999998732 1 421 11 122211 0 112221 236677665553
Q ss_pred hHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCCcceEEeeeccCCcch-hhhHHHHh-HcCCCCCcHHHHHhccccC
Q psy9394 114 EGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSIGNYFLLGETLDDAAG-DTFDKIAK-MLDLGYPGGPEISLISEFG 191 (339)
Q Consensus 114 ~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~~~~~~~~~~~~~s~G-~~~d~va~-~LG~~~~gg~~le~lA~~g 191 (339)
... .++ .++ .+++=-||.+-+-.+...+.+.- +|+.-| .+.|...+ ..|.+|+...+ +|+.|
T Consensus 149 ~lf------~~~--~~~-r~~lNIGGIaNiT~l~~~~~v~a----fDtGPgN~liD~~~~~~~~~~yD~dG~---~A~~G 212 (371)
T 3qbx_A 149 ALF------GDD--DTS-RAVLNIGGFSNVSLLSPGKPVRG----FDCGPGNVLMDAWIHHQRGEHFDRDGA---WAASG 212 (371)
T ss_dssp HHH------C------C-EEEEEESSEEEEEEECTTSCCEE----EEEEESSHHHHHHHHHHHCCSSCGGGH---HHHTS
T ss_pred HHh------CCC--CCc-eEEEecCCceEEEEeCCCCCEEE----EecCccHHHHHHHHHHHhCCCcccCcc---hhcCC
Confidence 221 111 134 33333455555555544333322 233333 36776665 66777763223 45555
Q ss_pred CCC-----------cccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9394 192 DPN-----------IYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAALKN 260 (339)
Q Consensus 192 ~~~-----------~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~~~ 260 (339)
+.. ++..|.| ++.+.-.|... .+...+++. ...+++|+.+.+-+..+..|++.++++..
T Consensus 213 ~v~~~lL~~ll~~pyf~~~pP-KStGRE~F~~~----~l~~~l~~~----~~ls~~Dv~ATLt~~TA~sIa~~~~~~~~- 282 (371)
T 3qbx_A 213 QVNHALLASLLADEFFAARGP-KSTGRERFNLP----WLQEHLARH----PALPAADIQATLLELSARSISESLLDAQP- 282 (371)
T ss_dssp CCCHHHHHHHHTSHHHHCCSS-CCCCTTTSSHH----HHHHHC---------CCHHHHHHHHHHHHHHHHHHHHHHHCT-
T ss_pred CcCHHHHHHHhcCchhcCCCC-CccCHHHhCHH----HHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 431 1222322 11111134311 123333221 13578999999988888888887766542
Q ss_pred hCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC-CCCCh--hHHHHHHHHHHHHHhcCCCC
Q psy9394 261 TGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK-EFCTD--NGAMIAFAGAMRIENNYKSE 323 (339)
Q Consensus 261 ~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~-~~~~D--~G~aiG~a~~~~~~~~~~~~ 323 (339)
..+.|+++||-+.|..|.++|.+++. +..|..... -...| .++++|+.+++.+ .|.+.+
T Consensus 283 -~~~~v~vcGGGa~N~~Lm~~L~~~l~--~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l-~g~p~~ 344 (371)
T 3qbx_A 283 -DCEEVLVCGGGAFNTALMKRLAMLMP--EARVASTDEYGIPPAWMEGMAFAWLAHRFL-ERLPGN 344 (371)
T ss_dssp -TCCEEEEESGGGGCHHHHHHHHHHCT--TSEEEEGGGGTCCTTTHHHHHHHHHHHHHH-TTCCCS
T ss_pred -CCceEEEECCccCcHHHHHHHHHhCC--CCEEeCHHHcCCChhHHHHHHHHHHHHHHH-cCCCCC
Confidence 35789999999999999999998763 456665553 23455 7888888888764 444554
No 17
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=97.89 E-value=0.00094 Score=61.33 Aligned_cols=126 Identities=14% Similarity=0.123 Sum_probs=78.2
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.+.+.+.+++++.+ ++++...+.... .+. ......+.+...++.++++.+++..++..|+++.
T Consensus 7 ~~lgiDiggt~~~~~l~d~~-g~il~~~~~~~~----~~~------~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~ 75 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTD-GVVQQKWSIETN----ILE------DGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT 75 (326)
T ss_dssp EEEEEEECSSEEEEEEEETT-CCEEEEEEEECC----CTT------TTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEECCC-CCEEEEEEEcCC----CCC------CHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec
Confidence 68999999999999999976 678876543221 000 0123456677788999998888777888887763
Q ss_pred CCCCC---chh-H-------HHH-HHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEeCC
Q psy9394 82 GPGLP---GSL-L-------VGS-SIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVSGG 139 (339)
Q Consensus 82 gPG~~---t~l-r-------~g~-~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~dGg 139 (339)
||.. ++. + .+. .+.+.+...+++|++-.+.-.+.+++-+... ......++.+.+.-|
T Consensus 76 -pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG 145 (326)
T 2qm1_A 76 -PGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTG 145 (326)
T ss_dssp -SSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred -ccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 5542 110 0 112 3456667777899887777777666543221 111235566665533
No 18
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.86 E-value=0.0065 Score=54.79 Aligned_cols=114 Identities=19% Similarity=0.192 Sum_probs=69.1
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+.+.+++++.+ ++++.+.+... + ...+.+...+..++++ .++..|+++
T Consensus 4 m~~lgidiggt~i~~~l~d~~-g~il~~~~~~~-----------~-----~~~~~~~~~i~~~i~~-----~~i~gigi~ 61 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPD-GKILDKTSIST-----------P-----ENLEDLLAWLDQRLSE-----QDYSGIAMS 61 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTT-CCEEEEEEECC-----------C-----SSHHHHHHHHHHHHTT-----SCCSEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCC-CCEEEEEEEeC-----------C-----CCHHHHHHHHHHHHHh-----CCCcEEEEE
Confidence 789999999999999999876 67876543321 0 0123345566666664 477888775
Q ss_pred CCCCCC---ch-------h--HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCC
Q psy9394 81 RGPGLP---GS-------L--LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGG 139 (339)
Q Consensus 81 ~gPG~~---t~-------l--r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg 139 (339)
. ||.. ++ + .-+..+.+.+ ...++|++-.+...+.+++-+. .......++.+.++-|
T Consensus 62 ~-pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~-~~~~~~~~v~l~~GtG 129 (292)
T 2gup_A 62 V-PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL-AHPELENAACVVIGTG 129 (292)
T ss_dssp E-SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH-HCTTCSSEEEEEESSS
T ss_pred e-cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH-hcCCCCeEEEEEECCc
Confidence 3 4432 11 1 1123345667 7789998877777776666443 1111235666666533
No 19
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.68 E-value=0.009 Score=53.74 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=65.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+.+.+++++.+ ++++.+.+.... .. ...+.+...+...+++.- .+++.|+++
T Consensus 1 m~~lgidiggt~~~~~l~d~~-g~il~~~~~~~~----~~----------~~~~~~~~~i~~~i~~~~---~~~~~igi~ 62 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGAD-GQIRDRRELPTP----AS----------QTPEALRDALSALVSPLQ---AHAQRVAIA 62 (289)
T ss_dssp CCEEEEEECSSEEEEEEECTT-CCEEEEEEEECC----SS----------CCHHHHHHHHHHHHTTTG---GGCSEEEEE
T ss_pred CeEEEEEeCCCEEEEEEECCC-CCEEEEEEecCC----CC----------CCHHHHHHHHHHHHHHHH---hhCCEEEEE
Confidence 889999999999999999865 578876543210 00 001223334444444321 134566665
Q ss_pred CCCCCCc---h-------h--HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEeCC
Q psy9394 81 RGPGLPG---S-------L--LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVSGG 139 (339)
Q Consensus 81 ~gPG~~t---~-------l--r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~dGg 139 (339)
. ||... + + ..+..+.+.+...+++|++-.+...+.+++-+......+..++.+.+.-|
T Consensus 63 ~-pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtG 132 (289)
T 2aa4_A 63 S-TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTG 132 (289)
T ss_dssp E-SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSS
T ss_pred e-ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCCCCCceEEEEEeCcc
Confidence 3 44321 1 1 11223456677778899887777777766643322111115555555433
No 20
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=97.55 E-value=0.0074 Score=56.35 Aligned_cols=235 Identities=16% Similarity=0.180 Sum_probs=132.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeC----C-C-C--CCchhHHHHH--H-------------HHHHHH-hcCCCEEeecc
Q psy9394 57 IPLLSKLLKNSNLELKKIDIIAYTR----G-P-G--LPGSLLVGSS--I-------------ACSIAL-SINKPVIGINH 112 (339)
Q Consensus 57 ~~~i~~~l~~~~i~~~did~ia~~~----g-P-G--~~t~lr~g~~--~-------------ak~la~-~~~~p~~~v~h 112 (339)
-+++..+++++++++++||.|++-. | | + .+| +-+|-. . .+.++. ..+.|++++-|
T Consensus 75 a~av~~~l~~~~~~~~~i~~IGsHGQTv~H~P~~~~~~T-lQiGd~~~iA~~tgi~vV~DFR~~DvAaGGQGAPLvP~fh 153 (370)
T 3cqy_A 75 ALAVNNLLAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFT-LQIGDPNTIATETGIDVIADFRRKDIALGGQGAPLVPAFH 153 (370)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEEEEEEEEEEETTSSSCEE-EEESCHHHHHHHHSSCEEECCHHHHHHTTSCCCCCHHHHH
T ss_pred HHHHHHHHHHcCCCcccccEEEeCCcccccCCCCCCCce-EecCCHHHHHHHHCcCEEeeChhhHhhCCCCCCCchHHHH
Confidence 3688899999999999999999642 2 5 2 133 222211 0 122222 24678776665
Q ss_pred hhHHhhhccccCCCCCCcEEEEEEeCCeeEEEEecCC-cceEEeeeccCCcch-hhhHHHHhH-cCCCCCcHHHHHhccc
Q psy9394 113 LEGHLLSPFLSNNSLTFPFIALLVSGGHTQLIKVNSI-GNYFLLGETLDDAAG-DTFDKIAKM-LDLGYPGGPEISLISE 189 (339)
Q Consensus 113 ~~aHa~s~~~~s~~~~~~~~~l~~dGg~~~~~~~~~~-~~~~~~~~~~~~s~G-~~~d~va~~-LG~~~~gg~~le~lA~ 189 (339)
... +.++ ..+ .+++=-||.+-+-.+... +.+.- +|+.-| .+.|...+. .|.+|+...+ +|+
T Consensus 154 ~~l------f~~~--~~~-r~~lNIGGIaNiT~l~~~~~~v~~----fDtGPgN~LiD~~~~~~~~~~yD~~G~---~A~ 217 (370)
T 3cqy_A 154 QQT------FAQV--GKK-RVILNIGGIANITYLPGNSEEVLG----FDTGPGNTLIDAWVQQVKNESYDKNGA---WAA 217 (370)
T ss_dssp HHH------HCCT--TCC-EEEEEESSEEEEEEECSSSSCCEE----EEEEESSHHHHHHHHHHHCCSSCGGGH---HHH
T ss_pred HHH------hCCC--CCC-eEEEEccceEEEEEEcCCCCCeEE----EeCCchhHHHHHHHHHHHCcCCCCCCH---hhc
Confidence 433 1122 123 333434665555555432 23221 233333 467766655 5777863222 344
Q ss_pred cCCCC-----------cccCCCccccCCCeeeecchHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9394 190 FGDPN-----------IYKFPRPMLYTNNFNFSFSGLKTSVLNVIKNIKLDSLKKEKANIARGFLDAIIDVLTFKCIAAL 258 (339)
Q Consensus 190 ~g~~~-----------~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~diAa~~q~~l~~~l~~~~~~~~ 258 (339)
.|+.. ++..|.| ++.+.-.|.. ..+...++.. ...+.+|+.+.+-+..+..|++.++++.
T Consensus 218 ~G~v~~~lL~~ll~~pyf~~~pP-KStGRE~F~~----~~l~~~l~~~----~~l~~~Dv~ATLt~~TA~sIa~~~~~~~ 288 (370)
T 3cqy_A 218 SGKTDPQLLAQLLSHPYFSLAYP-KSTGRELFNQ----AWLEQQLSAF----NQLNEEDIQSTLLDLTCHSIAQDILKLA 288 (370)
T ss_dssp HSCCCHHHHHHHHTCGGGGSCSS-CCCCSSSSSH----HHHHHHTTTC----TTSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHhcCccccCCCC-CccChhhcCH----HHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44321 2333323 1111113431 1123333221 1235889999999988888888887652
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC-CCCCh--hHHHHHHHHHHHHHhcCCCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK-EFCTD--NGAMIAFAGAMRIENNYKSE 323 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~-~~~~D--~G~aiG~a~~~~~~~~~~~~ 323 (339)
+.+.|+++||=+.|..|.++|.+++. +..|.-... -...| .++++|+.+++.+ .|.+.+
T Consensus 289 ---~~~~v~vcGGGa~N~~Lm~~L~~~l~--~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~l-~g~p~n 350 (370)
T 3cqy_A 289 ---QEGELFVCGGGAFNAELMQRLAALLP--GYRIDTTSALGVDPKWAEGIAFAWLAMRYQ-LGLPAN 350 (370)
T ss_dssp ---SSEEEEEESGGGGCHHHHHHHHHHCT--TEEEEEGGGGTCCTTTHHHHHHHHHHHHHH-TTCCCC
T ss_pred ---CCCEEEEECCCcCCHHHHHHHHHhCC--CCeeeeHHHhCCChhHHHHHHHHHHHHHHH-cCCCCC
Confidence 45689999999999999999998763 345543332 23455 7888998888865 455555
No 21
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.48 E-value=0.026 Score=52.98 Aligned_cols=123 Identities=15% Similarity=0.122 Sum_probs=76.2
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+++|||.+.+.+.+++++.+ ++++...+.... . . .......+.+...++.++++.+.+..++..|+++
T Consensus 88 ~~lGIDiGgt~i~~~l~d~~-G~vl~~~~~~~~-----~----~-~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~- 155 (380)
T 2hoe_A 88 YVLGIEVTRDEIAACLIDAS-MNILAHEAHPLP-----S----Q-SDREETLNVMYRIIDRAKDMMEKLGSKLSALTVA- 155 (380)
T ss_dssp EEEEEEECSSEEEEEEEETT-CCEEEEEEEECC-----S----S-CCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE-
T ss_pred eEEEEEECCCEEEEEEECCC-CCEEEEEEEccC-----C----C-CCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEE-
Confidence 68999999999999999976 678876543210 0 0 0123345666778888888777766788888775
Q ss_pred CCCCCc---hh--------HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEe
Q psy9394 82 GPGLPG---SL--------LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVS 137 (339)
Q Consensus 82 gPG~~t---~l--------r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~d 137 (339)
-||... +. .-++.+.+.+...+++|++-.+--.+-+++-....... ..++.+.+.
T Consensus 156 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~-~~~v~l~~G 221 (380)
T 2hoe_A 156 APGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKRD-DSFAWILTG 221 (380)
T ss_dssp ESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTCC-SCEEEEEES
T ss_pred eeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCCC-CcEEEEEeC
Confidence 244321 10 01123455677778899887777777666543321111 355655554
No 22
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.47 E-value=0.065 Score=49.32 Aligned_cols=108 Identities=8% Similarity=0.082 Sum_probs=72.5
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCC-CcCEEEE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELK-KIDIIAY 79 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~-did~ia~ 79 (339)
|++||||.+.+.+.+++++.+ ++++.+.+.... . ..+.......+.+...+++++++.++++. ++..|++
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~-g~i~~~~~~~~~-------~-~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi 76 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSED-GKILAEADGLST-------N-HWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGL 76 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETT-SCEEEEEEECCC-------C-HHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEE
T ss_pred eEEEEEEcCccceEEEEEeCC-CCEEEEEeCCCC-------C-cccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEE
Confidence 479999999999999999976 678876543110 0 00001233456677788888888888766 7888888
Q ss_pred eCCCCCCchhHHHHHHHHHHHHhcC---CCEEeecchhHHhhh
Q psy9394 80 TRGPGLPGSLLVGSSIACSIALSIN---KPVIGINHLEGHLLS 119 (339)
Q Consensus 80 ~~gPG~~t~lr~g~~~ak~la~~~~---~p~~~v~h~~aHa~s 119 (339)
+ -||.... .....+.+.+...++ .|++-.+--.+.+++
T Consensus 77 ~-~pG~vd~-~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 77 S-LSGGDQE-DAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp E-ETTTTCH-HHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred e-ccCCCch-HHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 6 4776532 123345566777775 898877777777766
No 23
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.38 E-value=0.072 Score=48.13 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=67.6
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+.+.+++++.+ ++++...+... +.. ..+.+...+...+++ ..++..|+++
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~-----------~~~----~~~~~~~~i~~~~~~----~~~i~gigi~ 63 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPH-GEIILTKSAEI-----------SGS----DGDQILAEMKVFLAE----NTDVTGIAVS 63 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-----------STT----CHHHHHHHHHHHHHT----CTTCCEEEEE
T ss_pred cEEEEEEeCCCeEEEEEECCC-CCEEEEEEecC-----------CCC----CHHHHHHHHHHHHhh----cCCeeEEEEe
Confidence 889999999999999999876 67887654321 000 012344444555553 2367788765
Q ss_pred CCCCCCc----------hh--HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEeCC
Q psy9394 81 RGPGLPG----------SL--LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVSGG 139 (339)
Q Consensus 81 ~gPG~~t----------~l--r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~dGg 139 (339)
. ||... .+ .-++.+.+.+...+++|++-.+--.|.+++-+... ......++.+.+.-|
T Consensus 64 ~-pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 134 (297)
T 4htl_A 64 A-PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG 134 (297)
T ss_dssp E-SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred c-CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc
Confidence 3 33221 01 11223456677778999877777666666543321 111235566665533
No 24
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.21 E-value=0.048 Score=50.10 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=62.4
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+.+.+++++.+ ++++...+... +........+.+...+++++++.+ .+..|+++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~ 87 (327)
T 4db3_A 24 AMYYGFDVGGTKIEFGAFNEK-LERVATERVPT-----------PTDDYPLLLETIAGLVAKYDQEFA----CEGKIGLG 87 (327)
T ss_dssp CCEEEEEECSSEEEEEEECTT-CCEEEEEEEEC-----------CTTCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred cEEEEEEECCCEEEEEEEeCC-CcEEEEEEecC-----------CCCCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 457999999999999999876 67887654321 110112334445566666666543 35666654
Q ss_pred CCCCCCc---h--------hHHHHHHHHHHHHhcCCCEEeecchhHHhhhcc
Q psy9394 81 RGPGLPG---S--------LLVGSSIACSIALSINKPVIGINHLEGHLLSPF 121 (339)
Q Consensus 81 ~gPG~~t---~--------lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~ 121 (339)
. ||... + ...+..+.+.|...+++|++-.+--.+-+++-.
T Consensus 88 ~-pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~ 138 (327)
T 4db3_A 88 L-PGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEA 138 (327)
T ss_dssp E-SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHH
T ss_pred e-eccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHH
Confidence 2 33321 1 001223456677778899877777777666644
No 25
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.16 E-value=0.046 Score=49.62 Aligned_cols=120 Identities=15% Similarity=0.185 Sum_probs=68.4
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+.+.+++++.+ + ++...+... +......-.+.+...+++++++. ..++..|+++
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~-~-~l~~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~ 64 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGK-R-LLSKVVVPT-----------PKEGGERVAEALAEAAERAEREA---GVRGEAIGLG 64 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSS-S-BSCCEEEEC-----------CSSCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEE
T ss_pred CEEEEEEEcCCEEEEEEEeCC-C-cEEEEEEcC-----------CCCChHHHHHHHHHHHHHHHhhc---cCCceEEEEE
Confidence 899999999999999999987 4 554333221 11011233444556677766654 2467777765
Q ss_pred CCCCCCc---h-------h--HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEe
Q psy9394 81 RGPGLPG---S-------L--LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVS 137 (339)
Q Consensus 81 ~gPG~~t---~-------l--r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~d 137 (339)
. ||... + + .-++.+.+.+...+++|++-.+--.+-+++-+... ......++.+.+.
T Consensus 65 ~-pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 133 (302)
T 3vov_A 65 T-PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEESSLYLTVS 133 (302)
T ss_dssp E-SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEES
T ss_pred e-cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCCCCCCEEEEEEC
Confidence 3 44321 1 0 11122456677778899887777767666544321 1112355555554
No 26
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.14 E-value=0.17 Score=48.25 Aligned_cols=123 Identities=13% Similarity=0.096 Sum_probs=77.4
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
.++|||.+.+.+.+++++.+ ++++...+... +. . ......+.+...++.++++.+++..++..|+++
T Consensus 109 ~~lGIDiGgt~i~~~l~d~~-G~il~~~~~~~-----~~----~--~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~- 175 (429)
T 1z05_A 109 QFLSMRLGRGYLTIALHELG-GEVLIDTKIDI-----HE----I--DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAIT- 175 (429)
T ss_dssp EEEEEEEETTEEEEEEEETT-SCEEEEEEEEC-----CC----C--BHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEE-
T ss_pred EEEEEEECCCEEEEEEECCC-CCEEEEEEEcC-----CC----C--CHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEe-
Confidence 57999999999999999976 67887654321 00 0 123445667788899999888877778777765
Q ss_pred CCCCC---ch-h-------HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEe
Q psy9394 82 GPGLP---GS-L-------LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVS 137 (339)
Q Consensus 82 gPG~~---t~-l-------r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~d 137 (339)
-||.. ++ + .-++.+.+.+...+++|++-.+--.+.+++-+... +.....++.+.+.
T Consensus 176 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~G 243 (429)
T 1z05_A 176 LPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIH 243 (429)
T ss_dssp ESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEES
T ss_pred ccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEEC
Confidence 24432 11 0 01123456677778999988787777766643321 1112355666554
No 27
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.12 E-value=0.03 Score=52.94 Aligned_cols=125 Identities=15% Similarity=0.153 Sum_probs=76.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+++|||.+.+.+.+++++.+ ++++...+... +..+ + ....+.+...++.++++.+++..++..|+++.
T Consensus 86 ~~lgiDiG~t~i~~~l~d~~-G~il~~~~~~~-----~~~~--~----~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~ 153 (406)
T 1z6r_A 86 HYLSLRISRGEIFLALRDLS-SKLVVEESQEL-----ALKD--D----LPLLDRIISHIDQFFIRHQKKLERLTSIAITL 153 (406)
T ss_dssp EEEEEEEETTEEEEEEEETT-CCEEEEEEEEC-----CSSC--S----SCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEE
T ss_pred EEEEEEEcCCEEEEEEEcCC-CCEEEEEEecC-----CCCC--H----HHHHHHHHHHHHHHHHhcCCCcCceeEEEEEe
Confidence 68999999999999999976 67887654321 0000 1 12345667788888888887767888887652
Q ss_pred CCCCCc---h-------h--HHHHHHHHHHHHhcCCCEEeecchhHHhhhcccc-CCCCCCcEEEEEEeCC
Q psy9394 82 GPGLPG---S-------L--LVGSSIACSIALSINKPVIGINHLEGHLLSPFLS-NNSLTFPFIALLVSGG 139 (339)
Q Consensus 82 gPG~~t---~-------l--r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~-s~~~~~~~~~l~~dGg 139 (339)
||... + + ..++.+.+.+...+++|++-.+--.+.+++-+.. .......++.+.+.-|
T Consensus 154 -pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG 223 (406)
T 1z6r_A 154 -PGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHN 223 (406)
T ss_dssp -SSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred -ecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc
Confidence 33210 1 1 1122345566777889988777777766654322 1111235566655433
No 28
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=97.08 E-value=0.11 Score=48.91 Aligned_cols=102 Identities=13% Similarity=0.227 Sum_probs=61.6
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeeccccc--ccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHK--EYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAY 79 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~--~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~ 79 (339)
++||||.+...++++|++.+ +++...++.... .. .+... ....+.....+.+++++.++...++..| +
T Consensus 3 ~vlgidiGgt~ik~al~d~~--~il~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i 72 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE--RMVKMQNFSHSP-DELGRFQKI------LDQLEFREKIARQFVEETGYSLSSFSAF-V 72 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT--EEEEEEEEECCH-HHHHTCSSG------GGGHHHHHHHHHHHHHTTTCCGGGCSEE-E
T ss_pred eEEEEECCccceeEEEEecc--hheeeeecccCc-ccccchhhH------HHHHHHHHHHHHHHHHHcCCCccCceEE-E
Confidence 69999999999999999977 687765432200 00 00000 0111222567778888888777788888 5
Q ss_pred eCCCCCC---ch----------------------hHHHHHHHHHHHHhcCCCEEeecchh
Q psy9394 80 TRGPGLP---GS----------------------LLVGSSIACSIALSINKPVIGINHLE 114 (339)
Q Consensus 80 ~~gPG~~---t~----------------------lr~g~~~ak~la~~~~~p~~~v~h~~ 114 (339)
+. ||.. +| ...+...++.+...+++|++-.+.-.
T Consensus 73 ~~-pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan 131 (381)
T 1saz_A 73 SR-GGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVV 131 (381)
T ss_dssp EE-CCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTT
T ss_pred ec-CCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCc
Confidence 42 2221 11 11245566677778899987666554
No 29
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=97.04 E-value=0.064 Score=47.92 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=45.8
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++|+||.++..++.++++++ +++...++... .+....+...+..+++..++++++++.|+++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~--~l~~~~r~~T~---------------~~t~de~~~~l~~ll~~~~~~~~~I~~iiIS 64 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGD--EIKLRFRHTSK---------------VSTSDELGIFLKSVLRENNCSPETIRKIAIC 64 (266)
T ss_dssp CEEEEEECSSEEEEEEEETT--EEEEEEEEECS---------------CCCHHHHHHHHHHHHHTTTCCGGGCCEEEEE
T ss_pred eEEEEEECCCeEEEEEEECC--EEEEEEEecCC---------------CCCHHHHHHHHHHHHHHcCCChhhceEEEEe
Confidence 68999999999999999988 68765544320 0112234556788889999988899988765
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.86 E-value=0.23 Score=45.26 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=69.8
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.+...+.+++++.+ ++++...+..... ........+.+...++++++ +..++..|+++.
T Consensus 20 ~~lgidiggt~i~~~l~d~~-g~il~~~~~~~~~----------~~~~~~~~~~i~~~i~~~~~----~~~~i~gigi~~ 84 (321)
T 3r8e_A 20 MILGIDVGGTSVKFGLVTPE-GEIQNATRFMTAD----------WVNGIGFVESMKLEIGNFLK----QYPIVKGVGIGW 84 (321)
T ss_dssp CEEEEECCSSEEEEEEECTT-CCEEEEEEEEHHH----------HHTTTCHHHHHHHHHHHHHH----HCTTCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEcCC-CcEEEEEEEeCCC----------CCCHHHHHHHHHHHHHHHHh----ccCCeeEEEEEe
Confidence 47999999999999999876 6788765432100 00001123445556666665 234788887753
Q ss_pred CCCCCc---h-------h--HHHHHHHHHHHHhc-CCCEEeecchhHHhhhcccc-CCCCCCcEEEEEEeCC
Q psy9394 82 GPGLPG---S-------L--LVGSSIACSIALSI-NKPVIGINHLEGHLLSPFLS-NNSLTFPFIALLVSGG 139 (339)
Q Consensus 82 gPG~~t---~-------l--r~g~~~ak~la~~~-~~p~~~v~h~~aHa~s~~~~-s~~~~~~~~~l~~dGg 139 (339)
||... + + .-++.+.+.+...+ ++|++-.+--.+-+++-... .......++.+.+.-|
T Consensus 85 -pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG 155 (321)
T 3r8e_A 85 -PGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENKRMQTFILLALGTG 155 (321)
T ss_dssp -SSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred -cccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 44321 1 0 11233456677788 99998777777766654332 1111235566665533
No 31
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=96.80 E-value=0.18 Score=46.42 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=71.0
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++||||.+...+.+++++.+ ++++...+... +. ......+.+...++.++++.+....++..|+++
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~-----------~~-~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~ 96 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMK-GEIVKKYTQFN-----------PK-TYEERINLILQMCVEAAAEAVKLNCRILGVGIS 96 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETT-SCEEEEEEEEC-----------CS-SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCC-CcEEEEEEEcC-----------CC-CHHHHHHHHHHHHHHHHHhcccccCceEEEEEe
Confidence 368999999999999999976 67887543321 00 012334556677777777655444567777664
Q ss_pred CCCCCC---ch-------h---HHHHHHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEe
Q psy9394 81 RGPGLP---GS-------L---LVGSSIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVS 137 (339)
Q Consensus 81 ~gPG~~---t~-------l---r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~d 137 (339)
-||.. ++ + ..++.+.+.+...+++|++-.+--.+-+++-+... ......++.+.+.
T Consensus 97 -~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~G 166 (343)
T 2yhw_A 97 -TGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITG 166 (343)
T ss_dssp -ESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEES
T ss_pred -cccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEEC
Confidence 23421 01 0 00112345566677899887777777666543321 1111355555554
No 32
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.74 E-value=0.3 Score=43.79 Aligned_cols=102 Identities=8% Similarity=0.023 Sum_probs=57.9
Q ss_pred EEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeCC
Q psy9394 3 ILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTRG 82 (339)
Q Consensus 3 iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~g 82 (339)
++|||.+...+.++|++ + ++++...+..... +. ........+.+...+++.+ +.+..++..|+++ -
T Consensus 2 ~lgiDiGGT~~~~~l~d-~-g~il~~~~~~~~~---~~-----~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig-~ 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E-GKSLGRFQTSGIN---PF-----QQDRNEIDTALRSEVLPAI---GQKASSIRAVYFY-G 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T-TEEEEEEEEECCC---TT-----TSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEE-E
T ss_pred EEEEEeCccceEEEEEe-C-CeEEEEEECCCCC---cc-----cCCHHHHHHHHHHHHHHHh---CCCcccccEEEEE-C
Confidence 69999999999999999 5 5787765331100 00 0001122333334444433 3445678888775 3
Q ss_pred CCCCchhHHHHHHHHHHHHhcC--CCEEeecchhHHhhhc
Q psy9394 83 PGLPGSLLVGSSIACSIALSIN--KPVIGINHLEGHLLSP 120 (339)
Q Consensus 83 PG~~t~lr~g~~~ak~la~~~~--~p~~~v~h~~aHa~s~ 120 (339)
||.. .+.+..+.+.+....+ .|+.-.+.-.+.+++.
T Consensus 68 pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge 105 (291)
T 1zbs_A 68 AGCT--PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARAL 105 (291)
T ss_dssp TTCC--TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHH
T ss_pred CCCC--hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhh
Confidence 6654 1223344556666677 4876666666655554
No 33
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.61 E-value=0.017 Score=56.43 Aligned_cols=85 Identities=19% Similarity=0.150 Sum_probs=70.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|.++.. ..+.++|+
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~---g~pV~~~~~----~e~~alGa 445 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV---NTSVERPEI----QETTALGA 445 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESC----CCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh---CCceEecCC----CcchHHHH
Confidence 468999999999999999998888876555 579999999999999999998887 788888762 23678899
Q ss_pred HHHHHHHhcCCCCC
Q psy9394 311 AGAMRIENNYKSES 324 (339)
Q Consensus 311 a~~~~~~~~~~~~~ 324 (339)
|.....-.|...+.
T Consensus 446 A~la~~a~G~~~~~ 459 (501)
T 3g25_A 446 AFLAGLAVGFWESK 459 (501)
T ss_dssp HHHHHHHTTSSSCT
T ss_pred HHHHHHHhCccCCH
Confidence 98888888876653
No 34
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.56 E-value=0.02 Score=56.04 Aligned_cols=84 Identities=18% Similarity=0.109 Sum_probs=69.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++|+
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGa 444 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL---DIDVQRAA----NLETTALGA 444 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHH---TSEEEECS----SSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHHHHHHHh---CCeEEecC----CCcchhHHH
Confidence 468999999999999999998888876555 579999999999999999998887 78888875 223678899
Q ss_pred HHHHHHHhcCCCC
Q psy9394 311 AGAMRIENNYKSE 323 (339)
Q Consensus 311 a~~~~~~~~~~~~ 323 (339)
|....+-.|...+
T Consensus 445 A~lA~~a~G~~~~ 457 (506)
T 3h3n_X 445 AYLAGLAVGFWKD 457 (506)
T ss_dssp HHHHHHHTTSSCS
T ss_pred HHHHHHHhCccCC
Confidence 8888877777654
No 35
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.50 E-value=0.022 Score=56.03 Aligned_cols=85 Identities=19% Similarity=0.112 Sum_probs=71.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++|+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~Qi~ADvl---g~pV~~~~----~~E~~alGA 443 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPE----VREVTALGA 443 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEES----CCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHHHHHHHHH---CCEEEeCC----CCchHHHHH
Confidence 468999999999999999888888877665 579999999999999999998887 78998886 234678999
Q ss_pred HHHHHHHhcCCCCC
Q psy9394 311 AGAMRIENNYKSES 324 (339)
Q Consensus 311 a~~~~~~~~~~~~~ 324 (339)
|....+-.|...+.
T Consensus 444 A~lA~~a~G~~~~~ 457 (526)
T 3ezw_A 444 AYLAGLAVGFWQNL 457 (526)
T ss_dssp HHHHHHHTTSSSCG
T ss_pred HHHHHHHhCCCCCH
Confidence 99998888887663
No 36
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.48 E-value=0.023 Score=55.67 Aligned_cols=84 Identities=19% Similarity=0.115 Sum_probs=69.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|.++.. ..+.++|+
T Consensus 370 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~----~e~~alGa 442 (510)
T 2p3r_A 370 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPEV----REVTALGA 442 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESC----CCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh---CCceEecCC----CCcHHHHH
Confidence 468999999999999999998888876655 579999999999999999988887 788888762 23678899
Q ss_pred HHHHHHHhcCCCC
Q psy9394 311 AGAMRIENNYKSE 323 (339)
Q Consensus 311 a~~~~~~~~~~~~ 323 (339)
|....+-.|...+
T Consensus 443 A~lA~~a~G~~~~ 455 (510)
T 2p3r_A 443 AYLAGLAVGFWQN 455 (510)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHhCccCC
Confidence 9888888887655
No 37
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=96.47 E-value=0.019 Score=56.05 Aligned_cols=84 Identities=19% Similarity=0.153 Sum_probs=68.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--C-CeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--I-NKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIA 309 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~-~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG 309 (339)
..+.++++++.+.++-.+.+.++.+.+..| + +.|.++||.+.|..+++.+.+.+ +.+|.++.. ..+.++|
T Consensus 375 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~a~s~~~~Q~~Adv~---g~pV~~~~~----~e~~alG 447 (503)
T 2w40_A 375 TERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDII---NTKIEVSKY----KEVTSLG 447 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCccccCHHHHHHHHHHH---CCeEEecCC----CcchHHH
Confidence 358999999999999999999988876555 4 67999999999999999998887 778887752 2267889
Q ss_pred HHHHHHHHhcCCCC
Q psy9394 310 FAGAMRIENNYKSE 323 (339)
Q Consensus 310 ~a~~~~~~~~~~~~ 323 (339)
+|....+-.|...+
T Consensus 448 aA~la~~~~G~~~~ 461 (503)
T 2w40_A 448 AAVLAGLEVKIWDS 461 (503)
T ss_dssp HHHHHHHHTTCSSC
T ss_pred HHHHHHHHhCccCC
Confidence 88888777776544
No 38
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.46 E-value=0.021 Score=55.83 Aligned_cols=84 Identities=24% Similarity=0.156 Sum_probs=68.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|.++.. ..+.++|+
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~----~e~~alGa 444 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQL---GVDVVRPKV----AETTALGA 444 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCcccCHHHHHHHHHHh---CCeEEeCCC----CcchHHHH
Confidence 468999999999999999999988876555 578999999999999999998887 788887752 33678898
Q ss_pred HHHHHHHhcCCCC
Q psy9394 311 AGAMRIENNYKSE 323 (339)
Q Consensus 311 a~~~~~~~~~~~~ 323 (339)
|....+-.|...+
T Consensus 445 A~lA~~~~G~~~~ 457 (504)
T 2d4w_A 445 AYAAGIAVGFWKG 457 (504)
T ss_dssp HHHHHHHHTSSCS
T ss_pred HHHHHhhcCccCC
Confidence 8888777776544
No 39
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.39 E-value=0.023 Score=55.72 Aligned_cols=83 Identities=18% Similarity=0.226 Sum_probs=67.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHH
Q psy9394 234 EKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFA 311 (339)
Q Consensus 234 ~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a 311 (339)
.+.++++++.+.++-.+.+.++.+.+ .| ++.|.++||.+.|..+++.+.+.+ |.+|.++.. ..+.++|+|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~~----~e~~alGAA 466 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLELIRS-LGASITRILLIGGGAKSEAIRTLAPSIL---GMDVTRPAT----DEYVAIGAA 466 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEECC----CCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEECchhcCHHHHHHHHHHh---CCceEecCC----cccHHHHHH
Confidence 68899999999999988888877654 54 468999999999999999998887 778888762 236789999
Q ss_pred HHHHHHhcCCCCC
Q psy9394 312 GAMRIENNYKSES 324 (339)
Q Consensus 312 ~~~~~~~~~~~~~ 324 (339)
.....-.|...++
T Consensus 467 ~lA~~a~G~~~~~ 479 (515)
T 3i8b_A 467 RQAAWVLSGETEP 479 (515)
T ss_dssp HHHHHHHHCCSSC
T ss_pred HHHHHHcCCCCCh
Confidence 9888878876553
No 40
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.32 E-value=0.022 Score=55.59 Aligned_cols=82 Identities=18% Similarity=0.181 Sum_probs=66.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+..+ ++.|.++||.+.|..+++.+.+.+ +.+|.++.. ..+.++|+
T Consensus 367 ~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~---g~pV~~~~~----~e~~alGa 439 (495)
T 2dpn_A 367 TSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL---GVPVAVPEV----TETTALGA 439 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh---CCeeEecCC----cccHHHHH
Confidence 468999999999999999999888866544 468999999999999999998887 778887752 23678888
Q ss_pred HHHHHHHhcCC
Q psy9394 311 AGAMRIENNYK 321 (339)
Q Consensus 311 a~~~~~~~~~~ 321 (339)
|....+-.|..
T Consensus 440 A~la~~a~G~~ 450 (495)
T 2dpn_A 440 ALMAGVGAGAL 450 (495)
T ss_dssp HHHHHHHHTSC
T ss_pred HHHHHhhcCcC
Confidence 88877776754
No 41
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.30 E-value=0.62 Score=42.32 Aligned_cols=119 Identities=10% Similarity=0.158 Sum_probs=68.2
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.+.+.+.+++++.+ ++++...+... +. ......+.+...+++++++ .++..|+++.
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~-G~i~~~~~~~~-----~~-------~~~~~~~~i~~~i~~~~~~-----~~i~gigi~~ 64 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEE-GRILSTFKVAT-----PP-------TAEGIVDAICAAVAGASEG-----HDVEAVGIGA 64 (321)
T ss_dssp EEEEEEECSSEEEEEEECTT-CCBCCCEEEEC-----CS-------SHHHHHHHHHHHHHHHHTT-----CCEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEECCC-CCEEEEEEeeC-----CC-------CHHHHHHHHHHHHHHHHhh-----cCceEEEEec
Confidence 58999999999999999876 67876543321 00 1123344455666666543 2677777652
Q ss_pred CCCCCc---h-hH-------HHHHHHHHHHHhcCCCEEeecchhHHhhhccccC-CCCCCcEEEEEEeCC
Q psy9394 82 GPGLPG---S-LL-------VGSSIACSIALSINKPVIGINHLEGHLLSPFLSN-NSLTFPFIALLVSGG 139 (339)
Q Consensus 82 gPG~~t---~-lr-------~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s-~~~~~~~~~l~~dGg 139 (339)
||... + ++ .+..+.+.+...+++|++-.+--.+-+++-+... ......++.+.+.-|
T Consensus 65 -pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 133 (321)
T 3vgl_A 65 -AGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTG 133 (321)
T ss_dssp -SSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred -cccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc
Confidence 44321 1 00 1122355677778999887777777666543321 111235566655533
No 42
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.28 E-value=0.02 Score=55.81 Aligned_cols=84 Identities=23% Similarity=0.175 Sum_probs=66.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAG 312 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~ 312 (339)
..+.++++++.+.++-.+.+.++.+.+...++.|.++||.+.|..+++.+.+.+ |.+|.+++. ..+.++|+|.
T Consensus 364 ~~~~~l~rAvlEgia~~~~~~l~~l~~~~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~----~e~~alGaA~ 436 (497)
T 2zf5_O 364 TGREHLARATLEAIAYLTRDVVDEMEKLVQIKELRVDGGATANDFLMQFQADIL---NRKVIRPVV----KETTALGAAY 436 (497)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC----SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEeCccccCHHHHHHHHhhc---CCeEEEcCC----CcchHHHHHH
Confidence 468899999999999888888887654324578999999999999999998887 788888762 2368889988
Q ss_pred HHHHHhcCCCC
Q psy9394 313 AMRIENNYKSE 323 (339)
Q Consensus 313 ~~~~~~~~~~~ 323 (339)
...+-.|...+
T Consensus 437 lA~~~~g~~~~ 447 (497)
T 2zf5_O 437 LAGLAVDYWAD 447 (497)
T ss_dssp HHHHHTTSSCC
T ss_pred HHHHHhCccCC
Confidence 88777776543
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.24 E-value=0.021 Score=55.43 Aligned_cols=84 Identities=18% Similarity=0.201 Sum_probs=66.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~ 310 (339)
..+.++++++.+.++-.+.+.++.+.+ .+ ++.|.++||.+.|..+++.+.+.+ |.+|.+++ ..+.+.++|+
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~~l~~-~g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~---~~e~~~alGA 428 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMDVVHA-CGIKPQSVTLIGGGARSEYWRQMLADIS---GQQLDYRT---GGDVGPALGA 428 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCSCEEEESGGGCCHHHHHHHHHHH---CCCEEEES---CTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcceEEEEeccccCHHHHHHHHHHh---CCeEEeCC---CCCcccHHHH
Confidence 358899999999999988888887754 34 578999999999999999998887 78888886 2333477888
Q ss_pred HHHHHHHhcCCCC
Q psy9394 311 AGAMRIENNYKSE 323 (339)
Q Consensus 311 a~~~~~~~~~~~~ 323 (339)
|....+-.|...+
T Consensus 429 A~lA~~~~g~~~~ 441 (484)
T 2itm_A 429 ARLAQIAANPEKS 441 (484)
T ss_dssp HHHHHHHHCTTSC
T ss_pred HHHHHHHcCCcCC
Confidence 8877776675443
No 44
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.19 E-value=0.031 Score=54.87 Aligned_cols=84 Identities=20% Similarity=0.065 Sum_probs=67.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH---h-CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKN---T-GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMI 308 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~---~-~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~ai 308 (339)
..+.++++++.+.++-.+.+.++.+.+. . .++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++
T Consensus 392 ~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~----~~e~~al 464 (520)
T 4e1j_A 392 TGPAEFARAALEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGMVASDWTMQRLSDLL---DAPVDRPV----ILETTAL 464 (520)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEESGGGGCHHHHHHHHHHH---TSCEEEES----CCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcceEEEeCccccCHHHHHHHHHHh---CCeEEecC----CCccHHH
Confidence 4688999999999998888888877654 2 3678999999999999999998887 78888875 2236788
Q ss_pred HHHHHHHHHhcCCCC
Q psy9394 309 AFAGAMRIENNYKSE 323 (339)
Q Consensus 309 G~a~~~~~~~~~~~~ 323 (339)
|+|.+...-.|...+
T Consensus 465 GAA~lA~~a~G~~~~ 479 (520)
T 4e1j_A 465 GVAWLAGSRAGVWPN 479 (520)
T ss_dssp HHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHcCCcCC
Confidence 998888887787655
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.08 E-value=0.044 Score=53.66 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=67.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEE-EccCCCCCChhHHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTV-FYPKKEFCTDNGAMIAFA 311 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v-~~~~~~~~~D~G~aiG~a 311 (339)
..+.++++++.+.++-.+.+.++.+.+.. ++.|.++||.+.|..+++.+.+.+ |.+| .++. ...+.++|+|
T Consensus 374 ~~~~~l~RAvlEgia~~~~~~~~~l~~g~-~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~----~~e~~alGaA 445 (511)
T 3hz6_A 374 TTRAQILLAVLEGAALSLRWCAELLGMEK-VGLLKVVGGGARSEAWLRMIADNL---NVSLLVKPD----AHLHPLRGLA 445 (511)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTGGG-CCEEEEESGGGGCHHHHHHHHHHH---TCEEEECCC----GGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhcCHHHHHHHHHHH---CCeeEEecC----CCCchHHHHH
Confidence 35889999999999988888888776522 789999999999999999998887 7888 7765 3557788998
Q ss_pred HHHHHHhcCCCC
Q psy9394 312 GAMRIENNYKSE 323 (339)
Q Consensus 312 ~~~~~~~~~~~~ 323 (339)
....+-.|...+
T Consensus 446 ~lA~~a~G~~~~ 457 (511)
T 3hz6_A 446 ALAAVELEWSHS 457 (511)
T ss_dssp HHHHHHTTSCSC
T ss_pred HHHHHHhCCcCC
Confidence 888777776654
No 46
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.93 E-value=0.046 Score=53.47 Aligned_cols=84 Identities=10% Similarity=0.042 Sum_probs=68.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKN-TGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFA 311 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~-~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a 311 (339)
..+.++++++.+.++-.+.+.++.+.+. ..++.|.++||.+.|..+++.+.+.+ |.+|.+++ ...+.++|+|
T Consensus 370 ~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 442 (508)
T 3ifr_A 370 HTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVL---QRPVQLLA----NPLGSAVGAA 442 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEEE----CCSTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCHHHHHHHHHHh---CCeEEecC----CCCchHHHHH
Confidence 3588999999999998888888877643 12468999999999999999998887 78888886 2336789999
Q ss_pred HHHHHHhcCCCC
Q psy9394 312 GAMRIENNYKSE 323 (339)
Q Consensus 312 ~~~~~~~~~~~~ 323 (339)
....+-.|...+
T Consensus 443 ~lA~~a~G~~~~ 454 (508)
T 3ifr_A 443 WVAAIGGGDDLG 454 (508)
T ss_dssp HHHHHHTCSSCC
T ss_pred HHHHHHhCCCCC
Confidence 998888887655
No 47
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.89 E-value=0.048 Score=53.26 Aligned_cols=84 Identities=19% Similarity=0.157 Sum_probs=68.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNT-GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFA 311 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~-~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a 311 (339)
..+.++++++.+.++-.+.+.++.+.+.. .++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++|+|
T Consensus 363 ~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 435 (504)
T 3ll3_A 363 HQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF---NVPIVTMK----EQQSGTLAAM 435 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH---TSCEEEES----CSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh---CCeEEecC----CCCchhHHHH
Confidence 35889999999999988888888775432 3579999999999999999998887 78888875 2337789999
Q ss_pred HHHHHHhcCCCC
Q psy9394 312 GAMRIENNYKSE 323 (339)
Q Consensus 312 ~~~~~~~~~~~~ 323 (339)
....+-.|...+
T Consensus 436 ~lA~~a~G~~~~ 447 (504)
T 3ll3_A 436 FLARQALGLNQD 447 (504)
T ss_dssp HHHHHHTTSCCS
T ss_pred HHHHHHcCccCC
Confidence 998888887665
No 48
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=95.76 E-value=1.1 Score=40.55 Aligned_cols=120 Identities=14% Similarity=0.111 Sum_probs=65.0
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+++|||.+.+.+.+++++.+ ++++...+... ++.....-.+.+...+++++++.+. ++..|+++.
T Consensus 8 ~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~~---~i~gigi~~ 72 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTAE-GETLHCEKKRT-----------AEVIAPGLVSGIGEMIDEQLRRFNA---RCHGLVMGF 72 (310)
T ss_dssp EEEEEEECSSEEEEEEEETT-SCEEEEEEEEH-----------HHHHTTCHHHHHHHHHHHHHHHHTE---EEEEEEEEE
T ss_pred EEEEEEeCCCEEEEEEECCC-CCEEEEEEecC-----------ccccHHHHHHHHHHHHHHHHHhcCC---CeeEEEEec
Confidence 68999999999999999977 67887543321 0000011223344556666655443 456666542
Q ss_pred CCCCCc---h-------h--HH--HHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEe
Q psy9394 82 GPGLPG---S-------L--LV--GSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVS 137 (339)
Q Consensus 82 gPG~~t---~-------l--r~--g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~d 137 (339)
||... + + +- +..+.+.|...+++|++-.+.-.+-+++...........++.+.+.
T Consensus 73 -pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~G 141 (310)
T 3htv_A 73 -PALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLG 141 (310)
T ss_dssp -SSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEES
T ss_pred -cccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhhcccCCceEEEEEec
Confidence 44321 1 1 11 1234567777889998766655554432222222112345555554
No 49
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.70 E-value=1.1 Score=39.94 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=44.7
Q ss_pred EEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 3 ILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 3 iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+|.||.++..++.++++++ +++...+++... .+....+...+..+++..++++.+++.|+++
T Consensus 2 lL~IDIGNT~ik~gl~~~~--~l~~~~r~~T~~--------------~~t~de~~~~l~~ll~~~~~~~~~i~~iiIS 63 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG--ELRQHWRMETDR--------------HKTEDEYGMLVKQLLEHEGLSFEDVKGIIVS 63 (268)
T ss_dssp EEEEEECSSEEEEEEEETT--EEEEEEEEECCT--------------TCCHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred EEEEEECcCcEEEEEEECC--EEEEEEEecCCC--------------cCCHHHHHHHHHHHHHHcCCCcccCcEEEEE
Confidence 6899999999999999987 687655443210 1112334557788888889988889877664
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.50 E-value=0.1 Score=51.57 Aligned_cols=82 Identities=10% Similarity=0.099 Sum_probs=65.1
Q ss_pred cHHHH---HHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHH
Q psy9394 234 EKANI---ARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMI 308 (339)
Q Consensus 234 ~~~di---Aa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~ai 308 (339)
.+.++ .+++.+.++-.+.+.++.+.+ .| ++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++
T Consensus 410 ~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~~~~i~~~GG~aks~~~~Qi~ADv~---g~pV~~~~----~~e~~al 481 (554)
T 3l0q_A 410 TPEDMALRYLATIQALALGTRHIIETMNQ-NGYNIDTMMASGGGTKNPIFVQEHANAT---GCAMLLPE----ESEAMLL 481 (554)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCCEEEEESGGGGCHHHHHHHHHHH---CCEEEEES----CSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccCHHHHHHHHHhh---CCeEEecC----CCcchHH
Confidence 57888 568888888777777776654 44 568999999999999999998887 78998886 2347789
Q ss_pred HHHHHHHHHhcCCCC
Q psy9394 309 AFAGAMRIENNYKSE 323 (339)
Q Consensus 309 G~a~~~~~~~~~~~~ 323 (339)
|+|....+-.|...+
T Consensus 482 GAA~lA~~a~G~~~~ 496 (554)
T 3l0q_A 482 GSAMMGTVAAGVFES 496 (554)
T ss_dssp HHHHHHHHHTTSSSS
T ss_pred HHHHHHHHHcCCcCC
Confidence 999888887777655
No 51
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.40 E-value=0.04 Score=54.11 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=55.7
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.+|..+.++|++.+ +++++..... .+.+.|..|.... ....-++.+...++++++++++++.+|.+|+++
T Consensus 5 YvlgID~GTss~Ka~l~d~~-G~~va~~~~~-~~~~~p~~G~~Eq-dp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis 80 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHD-ANIISVSQRE-FEQIYPKPGWVEH-DPMEIWATQSSTLVEVLAKADISSDQIAAIGIT 80 (526)
T ss_dssp EEEEEEECSSEEEEEEECTT-CCEEEEEEEE-CCCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEEccccceeeeEEcCC-CCEEEEEEEe-cCcccCCCCcEEE-CHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEe
Confidence 58999999999999999987 7888764322 1223344454322 223456677788999999999999999999876
No 52
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.26 E-value=0.16 Score=49.28 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=62.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHH
Q psy9394 232 KKEKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIA 309 (339)
Q Consensus 232 ~~~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG 309 (339)
...+.++++++.+.++-.+.+.++.+.+..| ++.|.++||.+.|..+++.+.+.+ |.+|..++ ..+.++|
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~-----~e~~alG 432 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADAC---GIRVIAGP-----VEASTLG 432 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEECC-----TTHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHH---CCeeecCC-----ccHhHHH
Confidence 3568999999999999999999988876454 579999999999999999998887 78887654 2457788
Q ss_pred HHHHHHHHh
Q psy9394 310 FAGAMRIEN 318 (339)
Q Consensus 310 ~a~~~~~~~ 318 (339)
+++..++-.
T Consensus 433 aa~~A~~a~ 441 (489)
T 2uyt_A 433 NIGIQLMTL 441 (489)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 866555443
No 53
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.06 E-value=0.15 Score=50.65 Aligned_cols=79 Identities=16% Similarity=0.136 Sum_probs=65.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEcchh-hhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTGI--NKLVVVGGVG-ANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIA 309 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~--~~v~laGGVa-~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG 309 (339)
..+.++++++.+.++-.+.+.++.+.+ .|. +.|.++||.+ .|..+++.+.+.+ |.+|.++. ...+.++|
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~ks~~~~Qi~ADv~---g~pV~~~~----~~e~~alG 480 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDAFHG-RGVEVHELYACGGLPQKNHLLMQIFADVT---NREIKVAA----SKQTPALG 480 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEEESSHHHHCHHHHHHHHHHH---TSCEEEBC----CSSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcCEEEEEcCchhhCHHHHHHHHHHH---CCeeEecC----CCccHHHH
Confidence 357899999999999888888877654 554 5899999999 9999999998887 78888876 24467889
Q ss_pred HHHHHHHHhc
Q psy9394 310 FAGAMRIENN 319 (339)
Q Consensus 310 ~a~~~~~~~~ 319 (339)
+|....+-.|
T Consensus 481 aA~lA~~a~G 490 (572)
T 3jvp_A 481 AAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9888887777
No 54
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=94.86 E-value=2.1 Score=38.50 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=65.3
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|+++|||.+.+...+++++.+ ++++...++.. ++ .+.+...+...+++ .++..|+++
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~t-----------~~------~~~~l~~i~~~~~~-----~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRED-GTIIDRIEFPT-----------XM------PDETIEXVIQYFSQ-----FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-----------CC------HHHHHHHHHHHHTT-----SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEECC-CcEEEEEEecC-----------CC------hHHHHHHHHHHhcc-----CCceEEEEE
Confidence 678999999999999999876 67887654321 10 12233333344442 267788765
Q ss_pred CCCCCCc--------h-h-------HHHHHHHHHHHHhcCCCEEeecchhHHhhhcccc-CCCCCCcEEEEEEe
Q psy9394 81 RGPGLPG--------S-L-------LVGSSIACSIALSINKPVIGINHLEGHLLSPFLS-NNSLTFPFIALLVS 137 (339)
Q Consensus 81 ~gPG~~t--------~-l-------r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~-s~~~~~~~~~l~~d 137 (339)
. ||... | + .-++.+.+.|...+++|++-.+.-.|.+++-+.. .......++.+.+.
T Consensus 60 ~-pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~G 132 (302)
T 3epq_A 60 S-FGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIG 132 (302)
T ss_dssp E-CSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEES
T ss_pred e-ceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCCCCCcEEEEEEC
Confidence 3 33221 1 0 1123345677778899988777777766654332 11112355666554
No 55
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=94.82 E-value=2.1 Score=38.18 Aligned_cols=114 Identities=19% Similarity=0.215 Sum_probs=64.0
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
|++||||.+.+.+.+++++.+ ++++...+... ... .+.......+.+...++.++++. +..|+++
T Consensus 2 M~~lgiDiGgt~~~~~l~d~~-g~i~~~~~~~~-------~~~-~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~ 66 (299)
T 2e2o_A 2 MIIVGVDAGGTKTKAVAYDCE-GNFIGEGSSGP-------GNY-HNVGLTRAIENIKEAVKIAAKGE------ADVVGMG 66 (299)
T ss_dssp CCEEEEEECSSCEEEEEECTT-SCEEEEEEESC-------CCH-HHHCHHHHHHHHHHHHHHHHTSC------CSEEEEE
T ss_pred eEEEEEEeCCCcEEEEEEcCC-CCEEEEEeCCC-------CCc-ccCCHHHHHHHHHHHHHHHHhcC------CCEEEEE
Confidence 469999999999999999876 67887543321 000 00011233444556666665532 5667665
Q ss_pred CCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhHHhhhccccCCCCCCcEEEEEEe
Q psy9394 81 RGPGLPGSLLVGSSIACSIALSINKPVIGINHLEGHLLSPFLSNNSLTFPFIALLVS 137 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~d 137 (339)
. ||. ..-+.-..+.+.+.. ++.|++-.+-..+.+++.... .+.+.+.+.
T Consensus 67 ~-~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~~~-----~~~v~l~~G 115 (299)
T 2e2o_A 67 V-AGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAETLG-----EPGVVVIAG 115 (299)
T ss_dssp E-TTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHHTT-----SCEEEEEES
T ss_pred c-CCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhccCC-----CCeEEEEec
Confidence 2 443 211111344556666 778887767666666554321 355555543
No 56
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.39 E-value=0.16 Score=49.67 Aligned_cols=78 Identities=17% Similarity=0.112 Sum_probs=54.7
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++||||.++..+.++|++.+ +++++...... +...+..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 3 ~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis 79 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDHD-ANIISVSQREF-EQIYPKPGWVEH-DPMEIWATQSSTLVEVLAKADISSDQIAAIGIT 79 (510)
T ss_dssp CEEEEEEECSSEEEEEEECTT-CCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred cEEEEEEcCCcceEEEEECCC-CCEEEEEEEec-ccccCCCCcEEE-CHHHHHHHHHHHHHHHHHHcCCChhheEEEEEe
Confidence 368999999999999999987 68887643322 112222233221 123456667788899999999988899999876
Q ss_pred C
Q psy9394 81 R 81 (339)
Q Consensus 81 ~ 81 (339)
.
T Consensus 80 ~ 80 (510)
T 2p3r_A 80 N 80 (510)
T ss_dssp E
T ss_pred C
Confidence 3
No 57
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.36 E-value=0.14 Score=50.45 Aligned_cols=79 Identities=14% Similarity=0.057 Sum_probs=61.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHH
Q psy9394 234 EKANIARGFLDAIIDVLTFKCIAALKNTG--INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFA 311 (339)
Q Consensus 234 ~~~diAa~~q~~l~~~l~~~~~~~~~~~~--~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a 311 (339)
.+.++++++.+.++-.+.+.++.+.+ .+ ++.|.++||.+.|..+++.+.+.+ |.+|.++. ...+.++|+|
T Consensus 405 ~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~----~~e~~alGaA 476 (538)
T 4bc3_A 405 PGDVEVRALIEGQFMAKRIHAEGLGY-RVMSKTKILATGGASHNREILQVLADVF---DAPVYVID----TANSACVGSA 476 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTC-CCCTTCCEEEEEGGGGCHHHHHHHHHHH---TSCEEECC----CTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCeEEEEcchhcCHHHHHHHHHHh---CCceEecC----CCCchHHHHH
Confidence 56899999998888887777665432 33 368999999999999999998887 78888875 2346778888
Q ss_pred HHHHHHhcC
Q psy9394 312 GAMRIENNY 320 (339)
Q Consensus 312 ~~~~~~~~~ 320 (339)
....+-.|.
T Consensus 477 ~lA~~a~G~ 485 (538)
T 4bc3_A 477 YRAFHGLAG 485 (538)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhCc
Confidence 877666654
No 58
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.31 E-value=2.9 Score=37.73 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=60.6
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++||||.+.+.+.+++++.+ ++++.+.+... +. . ......+.+...+++++.+.+ ++..|+++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~-g~il~~~~~~~-----~~----~--~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDST-RRLQWEKRVPT-----PH----T--SYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETT-CCEEEEEEEEC-----CC----S--CHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCC-CCEEEEEEecC-----CC----C--CHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 468999999999999999976 67887654321 00 0 012234445556666655432 46666654
Q ss_pred CCCCCC---ch-h-------HHHHHHHHHHHHhcCCCEEeecchhHHhhhcc
Q psy9394 81 RGPGLP---GS-L-------LVGSSIACSIALSINKPVIGINHLEGHLLSPF 121 (339)
Q Consensus 81 ~gPG~~---t~-l-------r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~ 121 (339)
. ||.. ++ + ..+..+.+.+...+++|++-.+--.+.+++-+
T Consensus 88 ~-pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~ 138 (327)
T 2ap1_A 88 I-PGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEA 138 (327)
T ss_dssp E-SSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHH
T ss_pred e-eeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHH
Confidence 2 3322 11 0 01122345666677899887777777666543
No 59
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.25 E-value=0.18 Score=49.15 Aligned_cols=76 Identities=14% Similarity=0.211 Sum_probs=53.6
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..+.++|++.+ +++++...... +.+.+..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 7 ~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis 82 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK-GEIAGVAQREF-KQYFPQSGWVEH-DANEIWTSVLAVMTEVINENDVRADQIAGIGIT 82 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEE
T ss_pred EEEEEEeCccceEEEEEcCC-CCEEEEEEeec-ccccCCCCcEEE-CHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEE
Confidence 68999999999999999987 68887643322 111222232221 123456667788899999999988899999886
No 60
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.08 E-value=0.16 Score=49.53 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=53.8
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..++++|++.+ +++++...... ....+..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 8 ~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis 83 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLP-DTVVAVASRPT-TLSSPHPGWAEE-DPAQWWDNARAVLAELKTTAGESDWRPGGICVT 83 (508)
T ss_dssp EEEEEEECSSEEEEEEEETT-TEEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEE
T ss_pred EEEEEEecCcceEEEEECCC-CCEEEEEEEec-ceecCCCCceEE-CHHHHHHHHHHHHHHHHHhcCCChhheEEEEEE
Confidence 68999999999999999987 78887643321 122222333222 123456667788899998888888899999886
No 61
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=93.81 E-value=0.22 Score=48.49 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=53.3
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..+.++|++.+ +++++...... ..+.+..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 6 ~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis 81 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN-GKKIGSSQKEF-PQYFPKSGWVEH-NANEIWNSVQSVIAGAFIESGIRPEAIAGIGIT 81 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEEcCCCceEEEEECCC-CCEEEEEEEec-CccCCCCCcEEE-CHHHHHHHHHHHHHHHHHHcCCChhheEEEEee
Confidence 68999999999999999987 68887643321 111122232221 123456667788889999888888899999886
No 62
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=93.81 E-value=0.25 Score=47.99 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=52.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++||||.++..++++|++.+ ++++....... +.+.+..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~-g~i~~~~~~~~-~~~~p~~g~~e~-d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis 78 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE-GRPVAVAKREF-RQLYPKPGWVEH-DPLEIWETTLWAAREVLRRAGAEAGEVLALGIT 78 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CEECSSTTCCEE-CHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred cEEEEEeeCCcceEEEEECCC-CCEEEEEEEee-ceecCCCCcEee-CHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 148999999999999999877 67887654322 111122232221 123456667788889999888888889999886
No 63
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=93.80 E-value=0.15 Score=50.29 Aligned_cols=77 Identities=6% Similarity=0.199 Sum_probs=54.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.++..+.++|++.+ +++++...... +.+.+..|.... ....-.+.+...++++++++++++.+|..|+++.
T Consensus 6 ~~lgIDiGtts~ka~l~d~~-G~il~~~~~~~-~~~~p~~g~~eq-dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 82 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ-GRMVGQASREI-TMFKPKADFVEQ-SSENIWQAVCNAVRDAVNQADINPIQVKGLGFDA 82 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT-SCEEEEEEEEC-CCEEEETTEEEE-CHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred EEEEEEECcccEEEEEECCC-CCEEEEEEEec-ccccCCCCcccc-CHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEcC
Confidence 68999999999999999977 78887643221 112222232221 2244566777888999998898888999998864
No 64
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=93.67 E-value=0.22 Score=48.39 Aligned_cols=76 Identities=13% Similarity=0.208 Sum_probs=52.7
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..+.++|++.+ ++++....... +.+.+..|.... ....-.+.+...+++++++.++++.+|..|+++
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~-g~~~~~~~~~~-~~~~p~~g~~e~-d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis 79 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE-SNIHGIGQYEF-PQHYPRPGWVEH-NPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVT 79 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT-CCEEEEEEEEC-CCBCCSTTCCEE-CHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEecCCchhEEEEECCC-CCEEEEEEecc-ceecCCCCcEEE-CHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 68999999999999999876 67887654322 111222232221 123456667788888888888888889999886
No 65
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=93.50 E-value=0.29 Score=47.87 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=53.0
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..+.++|++.+ +++++...... ....|..|.... ....-.+.+...++++++++++++.+|..|+++
T Consensus 27 ~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis 102 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN-QKIAGVGQKEF-KQHFPKSGWVEH-DPEEIWQTVVSTVKEAIEKSGITANDIAAIGIT 102 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEE
T ss_pred eEEEEEeCCcceEEEEECCC-CCEEEEEEEec-ccccCCCCcEEE-CHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 68999999999999999977 67887643221 111122232221 123456667788999999999888899999876
No 66
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.46 E-value=0.29 Score=47.63 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=53.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..+.++|++.+ ++++....... +.+.+..|.... ....-.+.+...+++++++.++++.+|..|+++
T Consensus 3 ~~lgiDiGtts~k~~l~d~~-G~i~~~~~~~~-~~~~p~~g~~e~-d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis 78 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS-GEIYSTGQLEH-DQIFPRAGWVEH-NPEQIWNNVREVVGLALTRGNLTHEDIAAVGIT 78 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred EEEEEecCCcceEEEEECCC-CCEEEEEEEec-ceecCCCCceeE-CHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEe
Confidence 68999999999999999977 67887654322 222222233221 123456667788889999888877889999876
No 67
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=93.43 E-value=0.25 Score=48.24 Aligned_cols=76 Identities=14% Similarity=0.151 Sum_probs=53.6
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.++..+.++|++.+ +++++...... +.+.+..|.... ....-.+.+...+++++ ++++++.+|..|+++.
T Consensus 6 ~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~ 81 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD-GGLHFQRSIAL-ETYGDGNGPVEQ-DAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSG 81 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CCBSTTSSCCEE-CHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEE
T ss_pred EEEEEEeCCCceEEEEECCC-CCEEEEEEeec-ceecCCCCCEEE-CHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEec
Confidence 78999999999999999977 68887653322 223333343322 22345666777888888 7888888999999873
No 68
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=93.24 E-value=1.2 Score=39.99 Aligned_cols=103 Identities=9% Similarity=0.049 Sum_probs=64.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCc--CEEEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKI--DIIAY 79 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~di--d~ia~ 79 (339)
++||||.+...+.+++++.+ ++++.+.+..... +........+.+...+++++++.++++.++ ..|++
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~-G~il~~~~~~~~~---------~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igi 81 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASD-GTPLAMAEGGASA---------LSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGL 81 (305)
T ss_dssp EEEEEEECSSCEEEEEEETT-CCEEEEEEESCCC---------GGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEE
T ss_pred EEEEEEcCccceEEEEEcCC-CCEEEEEeCCCCC---------cccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEE
Confidence 58999999999999999966 5788754321100 000123345667788899999888877777 56665
Q ss_pred eCCCCCCchhHHHHHHHHHHHHhc--CCCEEeecchhHHhhhc
Q psy9394 80 TRGPGLPGSLLVGSSIACSIALSI--NKPVIGINHLEGHLLSP 120 (339)
Q Consensus 80 ~~gPG~~t~lr~g~~~ak~la~~~--~~p~~~v~h~~aHa~s~ 120 (339)
+ -||....-+ +. .+...+ +.|+.-.+.-.+-+++.
T Consensus 82 g-~pG~v~~~~-~~----~l~~~~~~~~pv~v~NDa~aaa~ge 118 (305)
T 1zc6_A 82 G-LSGVHNRQW-AG----EFESQAPGFARLSLATDGYTTLLGA 118 (305)
T ss_dssp E-ESCCCTTSH-HH----HHHHTCCCCSEEEEECHHHHHHHHH
T ss_pred E-ecCCCchHH-HH----HHHHhCCCCceEEEECCHHHHHHhh
Confidence 4 255442111 11 144445 57887667666655543
No 69
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=93.07 E-value=0.48 Score=38.72 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=18.6
Q ss_pred CEEEEEecCCCceeEEEEEC
Q psy9394 1 MIILGIESSCDDSGLALYDT 20 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~ 20 (339)
|+|||||-++..+..++++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~~ 20 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQ 20 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEEe
Confidence 89999999999999999974
No 70
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=92.98 E-value=0.31 Score=40.22 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=19.6
Q ss_pred CEEEEEecCCCceeEEEEECC
Q psy9394 1 MIILGIESSCDDSGLALYDTH 21 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~ 21 (339)
|+|||||-++..+..++++.+
T Consensus 1 MrILGIDPGl~~tG~gvi~~~ 21 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVE 21 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEEC
T ss_pred CEEEEEccccCceEEEEEEec
Confidence 999999999999999999865
No 71
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=92.81 E-value=0.3 Score=48.34 Aligned_cols=78 Identities=8% Similarity=0.065 Sum_probs=50.6
Q ss_pred EEEEEecCCCceeEEEEEC-CCCceeEEEEeeecc----ccccc------CCccchHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9394 2 IILGIESSCDDSGLALYDT-HIKNLRSHVICSQNL----VHKEY------GGVVPELAARTHIQTIIPLLSKLLKNSNLE 70 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~-~~~~i~~~~~~~~~~----~~~~~------~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~ 70 (339)
++||||.++..+.++|++. + ++++++....... .+.|. .|.... ....-.+.+...++.++++++++
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~-G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eq-dp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSN-GQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQ-HPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTT-CCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEE-CHHHHHHHHTTHHHHHHHC---C
T ss_pred EEEEEecCCcceEEEEEECCC-CeEEEEEEeccCCccccccCCccccCCCCCcEEE-CHHHHHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999996 6 6888865432210 11121 232111 12234566777899999999998
Q ss_pred CCCcCEEEEeC
Q psy9394 71 LKKIDIIAYTR 81 (339)
Q Consensus 71 ~~did~ia~~~ 81 (339)
+.+|..|+++.
T Consensus 84 ~~~I~~Igis~ 94 (572)
T 3jvp_A 84 ADDVIGIGVDF 94 (572)
T ss_dssp CSCEEEEEEEE
T ss_pred hhHEEEEEEec
Confidence 88999998864
No 72
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=92.80 E-value=0.42 Score=35.75 Aligned_cols=87 Identities=8% Similarity=-0.015 Sum_probs=53.2
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEE--EEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSH--VICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIA 78 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia 78 (339)
|.+||||-+...+++|+.+.. + .++. +.+.+ +..+.....+.+++++. +++.|+
T Consensus 1 mriLglD~G~kriGvAvsd~~-~-~~A~pl~ti~~-----------------~~~~~~~~~l~~li~e~-----~v~~iV 56 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG-V-PLASGRGYLVR-----------------KTLEEDVEALLDFVRRE-----GLGKLV 56 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC-C-SSCCCEEEEEC-----------------CCHHHHHHHHHHHHHHH-----TCCEEE
T ss_pred CcEEEEEeCCCEEEEEEEeCC-C-CeeeeeEEEEc-----------------cCcHHHHHHHHHHHHHc-----CCCEEE
Confidence 889999999999999999876 3 4442 22211 01122334555555542 578888
Q ss_pred EeCCC----CCCc-hhHHHHHHHHHHHHhcCCCEEeecch
Q psy9394 79 YTRGP----GLPG-SLLVGSSIACSIALSINKPVIGINHL 113 (339)
Q Consensus 79 ~~~gP----G~~t-~lr~g~~~ak~la~~~~~p~~~v~h~ 113 (339)
++. | |..+ ..+....|++.|... ++|++.+++.
T Consensus 57 vGl-P~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DER 94 (98)
T 1iv0_A 57 VGL-PLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDER 94 (98)
T ss_dssp EEC-CCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCS
T ss_pred Eee-ccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCC
Confidence 862 2 2211 123334577777776 8888877653
No 73
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=92.77 E-value=0.24 Score=40.16 Aligned_cols=90 Identities=22% Similarity=0.166 Sum_probs=51.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeE-EEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRS-HVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAY 79 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~ 79 (339)
|.+||||-++..+++|+.+.. +.+.. ...+...+ ...+.....+.+++++. +++.|++
T Consensus 3 mriLGiDpG~~riGvAv~d~~-g~~a~p~~~I~~~~---------------~r~~~~~~~l~~li~~~-----~~~~ivV 61 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM-GWTAQGIETIKINE---------------AEGDYGLSRLSELIKDY-----TIDKIVL 61 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT-SSSEEEEEEEECBG---------------GGTBCCHHHHHHHHTTS-----EEEEEEE
T ss_pred CEEEEEEccCCEEEEEEEECC-CCEEeeEEEEEcCC---------------cchHHHHHHHHHHHHHc-----CCCEEEE
Confidence 789999999999999999976 44433 22221100 00122334556665542 6788988
Q ss_pred eCCCCC---CchhHHH--HHHHHHHHHhcCCCEEeecc
Q psy9394 80 TRGPGL---PGSLLVG--SSIACSIALSINKPVIGINH 112 (339)
Q Consensus 80 ~~gPG~---~t~lr~g--~~~ak~la~~~~~p~~~v~h 112 (339)
.. |=. -++.+.+ ..|++.+....++|++.|++
T Consensus 62 Gl-P~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDE 98 (150)
T 1vhx_A 62 GF-PKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDE 98 (150)
T ss_dssp EC-CCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECC
T ss_pred ee-eecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecC
Confidence 71 311 1233332 34566666556888888444
No 74
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=92.63 E-value=0.35 Score=47.00 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=50.4
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhC--CCCCCCcCEEEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNS--NLELKKIDIIAY 79 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~--~i~~~did~ia~ 79 (339)
++||||.++..++++|++.+ ++++....... +...+..|.... ....-.+.+...++++++++ ++++.+|..|++
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~-g~i~~~~~~~~-~~~~~~~g~~e~-d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igi 81 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE-LNIVHSNNLNH-EQKCLKPGWYEH-DPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGI 81 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT-CCEEEEEEEEC-CCBCCSTTCCEE-CHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEE
T ss_pred EEEEEEeCCcceEEEEECCC-CCEEEEEEEee-eeecCCCCcEEE-CHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEE
Confidence 58999999999999999987 67887654322 111122232221 12344566677888888776 676678888887
Q ss_pred e
Q psy9394 80 T 80 (339)
Q Consensus 80 ~ 80 (339)
+
T Consensus 82 s 82 (503)
T 2w40_A 82 T 82 (503)
T ss_dssp E
T ss_pred c
Confidence 6
No 75
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=91.73 E-value=0.4 Score=44.90 Aligned_cols=53 Identities=19% Similarity=0.137 Sum_probs=39.9
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhc
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENN 319 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~ 319 (339)
.++.|+|+||.+....+.+.|.+.+. +.++..++ --|.+++.|++.+..+..|
T Consensus 351 ~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 351 QIQEIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp GCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCSS---CTTTHHHHHHHHHHHHHC-
T ss_pred hCCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHHHHHHhcC
Confidence 35789999999999999999998762 33444443 3467899999988876654
No 76
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=91.55 E-value=0.38 Score=47.22 Aligned_cols=78 Identities=13% Similarity=0.077 Sum_probs=48.7
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeeccccccc----CCccchH------HHHHHHHHHHHHHHHHHHhCCCCC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEY----GGVVPEL------AARTHIQTIIPLLSKLLKNSNLEL 71 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~----~G~~~~~------~~~~~~~~l~~~i~~~l~~~~i~~ 71 (339)
++||||.+|..++++|++.+ +++++...... +.+.|. .|..... ....-+......+.+.+.++++++
T Consensus 11 ~~lgID~GTts~Ka~l~d~~-G~vv~~~~~~~-~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~~~~~~~ 88 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAE-LNVFYEESVHF-DRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKASGFDF 88 (538)
T ss_dssp EEEEEEECSSEEEEEEEETT-CCEEEEEEEEH-HHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEEEEEcCcCEEEEEECCC-CCEEEEEEEec-CCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHHHcCCCh
Confidence 68999999999999999987 78988654322 111121 3432100 011122233344445667788888
Q ss_pred CCcCEEEEeC
Q psy9394 72 KKIDIIAYTR 81 (339)
Q Consensus 72 ~did~ia~~~ 81 (339)
.+|.+|+++.
T Consensus 89 ~~I~aIgis~ 98 (538)
T 4bc3_A 89 SQVLALSGAG 98 (538)
T ss_dssp GGEEEEEEEE
T ss_pred HHeEEEEecc
Confidence 8999999864
No 77
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=91.38 E-value=6.8 Score=34.17 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhh
Q psy9394 234 EKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGA 274 (339)
Q Consensus 234 ~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~ 274 (339)
..+-+.+++.......+-.+++++.++.....|+++||-+.
T Consensus 182 T~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~vi~TGG~a~ 222 (249)
T 3bex_A 182 TEENIRLGVVNGSVYALEGIIGRIKEVYGDLPVVLTGGQSK 222 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEESTTSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCChH
Confidence 45566666677777777777777777764458999999653
No 78
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=91.19 E-value=0.51 Score=43.88 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=37.5
Q ss_pred CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHH
Q psy9394 263 INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRI 316 (339)
Q Consensus 263 ~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~ 316 (339)
++.|+|+||.++...+.+.|.+.+. +.++..++ --|.+++.|++.+..+
T Consensus 344 i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 344 VDDIVLVGGSTRIPKVQQLLESYFD--GKKASKGI---NPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHHHHHH
T ss_pred CCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHHHHHh
Confidence 5799999999999999999998762 34444443 3456788998887654
No 79
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.07 E-value=0.68 Score=46.13 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhC-----CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcCCCC
Q psy9394 250 LTFKCIAALKNTG-----INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNYKSE 323 (339)
Q Consensus 250 l~~~~~~~~~~~~-----~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~~~~ 323 (339)
+...+++.++..+ ++.|+|+||.+....+.+.+.+.+ |.++..+ ..-|.+++.|++.+.....|...+
T Consensus 316 i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f---g~~~~~~---~nPdeaVA~GAai~a~~l~~~~~~ 388 (605)
T 4b9q_A 316 SIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKD---VNPDEAVAIGAAVQGGVLTGDVKD 388 (605)
T ss_dssp TTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH---TSCCCSS---SCTTTHHHHHHHHHHHHHHTSSCS
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh---ccCcCCC---cChhHHHHHhHHHHHHHhcCCCCc
Confidence 3444455555443 579999999999999999999987 4443333 235778999999998887776444
No 80
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=90.95 E-value=0.96 Score=43.95 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=50.2
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
++||||.++..++++|++.+ +++++...... +.+.+..|.... ....-.+.+...+++++++.+ .+|..|+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~-G~il~~~~~~~-~~~~p~~g~~e~-dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis~ 78 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN-GKAVASVSKGY-PLIQTKVGQAEE-DPKLIFDAVQEIIFDLTQKID---GKIAAISWSS 78 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHTCS---SEEEEEEEEE
T ss_pred EEEEEEecCCceEEEEEcCC-CCEEEEEEeec-ceecCCCCcEEE-CHHHHHHHHHHHHHHHHHhCC---CCeEEEEEEC
Confidence 58999999999999999987 78887654322 222233343322 123455667778888888765 5788888764
No 81
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=90.09 E-value=1.2 Score=43.41 Aligned_cols=53 Identities=15% Similarity=0.072 Sum_probs=41.3
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
.++.|+|+||.+....+.+.+.+.+ +.++..++ .-|.+++.|++.+.....|.
T Consensus 302 ~i~~VvLvGG~s~~p~v~~~l~~~f---~~~~~~~~---~p~~aVa~Gaa~~a~~l~~~ 354 (509)
T 2v7y_A 302 DIDKVILVGGSTRIPAVQEAIKREL---GKEPHKGV---NPDEVVAIGAAIQGGVIAGE 354 (509)
T ss_dssp GCSEEEEESGGGGCHHHHHHHHHHH---SSCCBCCS---CTTTHHHHHHHHHHHHHHTC
T ss_pred HCcEEEEECCcccChHHHHHHHHHh---CCCcCcCC---CchhhhHhhHHHHHHHhcCC
Confidence 3679999999999999999999987 33433332 34778999999888777664
No 82
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=89.89 E-value=0.57 Score=43.48 Aligned_cols=60 Identities=18% Similarity=0.102 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHh-----CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHH
Q psy9394 250 LTFKCIAALKNT-----GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMR 315 (339)
Q Consensus 250 l~~~~~~~~~~~-----~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~ 315 (339)
+.+.+.+..++. .++.|+|+||.++...+.+.+.+.+ +.++..++ .-|.+++.|++.+..
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~---~~~v~~~~---~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKDV---NPDEAVAIGAAVQGG 380 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH---SSCCBCSS---CTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh---CCCCCCCc---ChHHHHHHHHHHHHH
Confidence 334444444443 3579999999999999999999987 34444443 336788999887653
No 83
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=89.74 E-value=1.8 Score=40.55 Aligned_cols=68 Identities=10% Similarity=0.184 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhC-----CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEcc---CCCCCChhHHHHHHHHHHHHH
Q psy9394 249 VLTFKCIAALKNTG-----INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYP---KKEFCTDNGAMIAFAGAMRIE 317 (339)
Q Consensus 249 ~l~~~~~~~~~~~~-----~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~---~~~~~~D~G~aiG~a~~~~~~ 317 (339)
.+.+.+++..++.+ ++.|+|+||.+....+.+.+.+.+.. ...+.-| ....-.|..++.|++.+....
T Consensus 326 ~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~-~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 326 GFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPE-STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCT-TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCC-ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 34455555555543 57999999999999999999987631 1245444 223456788999998877543
No 84
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=89.13 E-value=0.83 Score=44.58 Aligned_cols=66 Identities=9% Similarity=0.094 Sum_probs=45.3
Q ss_pred EEEEEecCCCceeEEEEE-CCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYD-THIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..++++|++ ++ ++++++.... |.|... +..+.+...+..++++++. ..+|..|+++
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~-G~i~~~~~~~-------~~g~~e-----~d~~~~~~~i~~~l~~~~~-~~~I~~Igis 71 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAET-GELVRFGQAK-------HPNGTS-----VDPSYWWSAFQEAAEQAGG-LDDVSALAVG 71 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTT-CCEEEEEEEE-------CCSSSE-----ECTHHHHHHHHHHHHHTTC-STTEEEEEEE
T ss_pred EEEEEEeccccEEEEEEECCC-CeEEEEEEEe-------CCCCce-----ECHHHHHHHHHHHHHhcCC-ccCceEEEEe
Confidence 789999999999999999 66 6788765432 212111 1123344566777777776 5789999886
Q ss_pred C
Q psy9394 81 R 81 (339)
Q Consensus 81 ~ 81 (339)
.
T Consensus 72 ~ 72 (515)
T 3i8b_A 72 G 72 (515)
T ss_dssp E
T ss_pred C
Confidence 3
No 85
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=88.89 E-value=14 Score=34.06 Aligned_cols=100 Identities=11% Similarity=0.082 Sum_probs=59.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEE-EeeecccccccCCccchHHHHHHHHHHHHHHHH---HHHhCCCCCCCcCEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHV-ICSQNLVHKEYGGVVPELAARTHIQTIIPLLSK---LLKNSNLELKKIDII 77 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~---~l~~~~i~~~did~i 77 (339)
+++|||.+.+.+.+++++ + ++++.+. ++.. +. . ..+.+...+.. .+++. +. .++..|
T Consensus 10 ~~lgiDIGgt~i~~~l~d-~-G~il~~~~~~~~-----------~~---~-~~~~~l~~i~~~~~~i~~~-~~-~~i~gI 70 (366)
T 3mcp_A 10 IVMTLDAGGTNFVFSAIQ-G-GKEIADPVVLPA-----------CA---D-CLDKCLGNLVEGFKAIQAG-LP-EAPVAI 70 (366)
T ss_dssp EEEEEECSSSEEEEEEEE-T-TEECSCCEEEEC-----------CT---T-CHHHHHHHHHHHHHHHHTT-CS-SCCCEE
T ss_pred EEEEEEECcceEEEEEEE-C-CEEEEEEEEEEC-----------CC---C-CHHHHHHHHHHHHHHHHHH-hh-cCCeEE
Confidence 579999999999999999 6 5777644 3221 00 0 11223333333 44432 11 578888
Q ss_pred EEeCCCCCCc-------------hhHHHHHHHHHHHHhcCCCEEeecchhHHhhhcc
Q psy9394 78 AYTRGPGLPG-------------SLLVGSSIACSIALSINKPVIGINHLEGHLLSPF 121 (339)
Q Consensus 78 a~~~gPG~~t-------------~lr~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~ 121 (339)
+++. ||... +.+-++.+.+.|...+++|++-.+...|.|++-.
T Consensus 71 GIav-PG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~ 126 (366)
T 3mcp_A 71 SFAF-PGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEA 126 (366)
T ss_dssp EEEC-CSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHH
T ss_pred EEEe-cceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHH
Confidence 8763 44331 1110344556777788999887777777666543
No 86
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=88.86 E-value=1.9 Score=41.51 Aligned_cols=73 Identities=10% Similarity=0.082 Sum_probs=48.0
Q ss_pred EEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 3 ILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 3 iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+||||.++..+.++|++.+ ++++....... +.+.+..|.... ....-.+.+...+++++++.+ +.+|..|+++
T Consensus 2 ~lgiDiGtt~~k~~l~d~~-g~~l~~~~~~~-~~~~p~~g~~e~-d~~~~~~~i~~~i~~~~~~~~--~~~i~~Igis 74 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ-GEVVAAQTEKL-TVSRPHPLWSEQ-DPEQWWQATDRAMKALGDQHS--LQDVKALGIA 74 (484)
T ss_dssp EEEEEECSSEEEEEEECTT-SCEEEEEEEEC-CCBCSSTTCCEE-CHHHHHHHHHHHHHHHHHHSC--CTTCCEEEEE
T ss_pred EEEEEecCcccEEEEECCC-CCEEEEEEecc-ccccCCCCCEeE-CHHHHHHHHHHHHHHHHHhCC--ccceEEEEEc
Confidence 6999999999999999876 67887653322 222232233221 123455667777888877643 4689999886
No 87
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=87.51 E-value=0.94 Score=41.32 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=35.9
Q ss_pred CeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHH
Q psy9394 264 NKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMR 315 (339)
Q Consensus 264 ~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~ 315 (339)
++|+|+||.++...+.+.|.+.+ +.++.+++ .-|.+++.|++.+..
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~---~~~v~~~~---~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKET---GISVIRSE---EPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHH---SSCEEECS---STTTHHHHHHHHGGG
T ss_pred CcEEEECccccchHHHHHHHHHH---CCCccccC---ChHHHHHHHHHHHHh
Confidence 57999999999999999999987 45566654 235678888877664
No 88
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=86.89 E-value=22 Score=33.86 Aligned_cols=75 Identities=9% Similarity=0.040 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--eEEEEcchhhhH-HHHHHHHHHHHhC---CcEEEccCCCCCChhHHHHHH
Q psy9394 237 NIARGFLDAIIDVLTFKCIAALKNTGIN--KLVVVGGVGANK-QLRKKLNILKKQY---NYTVFYPKKEFCTDNGAMIAF 310 (339)
Q Consensus 237 diAa~~q~~l~~~l~~~~~~~~~~~~~~--~v~laGGVa~N~-~l~~~l~~~l~~~---~~~v~~~~~~~~~D~G~aiG~ 310 (339)
.+|..+.+..++.+...+..+..+.+.+ .|++.|||+.+. .+.+.+.+.+.+. ..++.+. +++| |..+|+
T Consensus 365 ~va~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~---l~~d-gs~iGA 440 (451)
T 1bdg_A 365 YACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR---LSED-GSGKGA 440 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE---ECTT-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE---ECCC-ccHHHH
Confidence 5777777777777777777777777777 677889997543 3555555555432 2234333 2455 555777
Q ss_pred HHHHH
Q psy9394 311 AGAMR 315 (339)
Q Consensus 311 a~~~~ 315 (339)
|.+.+
T Consensus 441 AllA~ 445 (451)
T 1bdg_A 441 AAIAA 445 (451)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 77653
No 89
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=85.58 E-value=2 Score=43.45 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=42.0
Q ss_pred CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 263 INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 263 ~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
+..|+|+||.+.-..+.+.+.+.+ |.++..+. --|.+++.|++.+.....+.
T Consensus 335 I~~VvLvGGssriP~v~~~l~~~f---g~~~~~~~---nPdeaVA~GAa~~a~~ls~~ 386 (675)
T 3d2f_A 335 VDFVEIIGGTTRIPTLKQSISEAF---GKPLSTTL---NQDEAIAKGAAFICAIHSPT 386 (675)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHH---TSCEECCS---CTTTHHHHHHHHHHHHTCSS
T ss_pred CcEEEEECCCccChHHHHHHHHhc---CCCccccC---CcchHHHHHHHHHHHHhCCC
Confidence 679999999999999999999887 45554443 34788999999988777664
No 90
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=84.55 E-value=0.93 Score=43.85 Aligned_cols=70 Identities=11% Similarity=0.059 Sum_probs=47.6
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHH-HHhCCcEEEccCCCCCChhHHHHHHHH
Q psy9394 236 ANIARGFLDA--IIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLNIL-KKQYNYTVFYPKKEFCTDNGAMIAFAG 312 (339)
Q Consensus 236 ~diAa~~q~~--l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~-l~~~~~~v~~~~~~~~~D~G~aiG~a~ 312 (339)
.++++++.+. ++-.+.+.++.+. ..+.|.++||.+.|..+++.+.+. + |.+|.++.. ..+.++|+|.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~---~~~~i~~~GG~a~s~~w~Qi~ADv~~---g~pV~~~~~----~e~~alGAA~ 431 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG---STGRILVEGRFAEADVFVRALASLRP---DCAVYTANA----HNDVSFGALR 431 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT---CCSEEEEESGGGGCHHHHHHHHHHST---TSEEEEESS----CCCTTGGGHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc---CCCeEEEeCCcccCHHHHHHHhhhcC---CCeEEEcCC----CchHHHHHHH
Confidence 4666666653 4444444444332 237899999999999999999887 7 788988862 2245567666
Q ss_pred HHH
Q psy9394 313 AMR 315 (339)
Q Consensus 313 ~~~ 315 (339)
...
T Consensus 432 lA~ 434 (482)
T 3h6e_A 432 LID 434 (482)
T ss_dssp HHC
T ss_pred HhC
Confidence 653
No 91
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=83.49 E-value=2.3 Score=41.76 Aligned_cols=65 Identities=18% Similarity=0.128 Sum_probs=45.8
Q ss_pred HHHHHHHHHHh-----CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 251 TFKCIAALKNT-----GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 251 ~~~~~~~~~~~-----~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
.+.+++..+.. .++.|+|+||.+....+.+.+.+.+. +.++..+. --|.+++.|++.+.....|.
T Consensus 314 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~--~~~v~~~~---np~~aVA~Gaa~~a~~l~~~ 383 (554)
T 1yuw_A 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILSGD 383 (554)
T ss_dssp THHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcC--CCccccCC---CchhHHHHHHHHHHHHhcCC
Confidence 33444444443 36799999999999999999988763 23333332 34678999999988777763
No 92
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=81.86 E-value=3.3 Score=39.91 Aligned_cols=69 Identities=13% Similarity=0.061 Sum_probs=41.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
++||||.++..++++|++++ ++++...+.... .+ +..|.... ..+.+...+..++++.- ..+|..|+++
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~-G~i~~~~~~~~~-~~-~~~g~~eq-----dp~~~~~~~~~~i~~~~--~~~I~aIgis 75 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD-GRMLDRQVRPSI-PL-EIDGIRRL-----DAPDTGRWLLDVLSRYA--DHPVTTIVPV 75 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT-SCEEEEEEEECC-CE-ESSSCEEC-----CHHHHHHHHHHHHHHTT--TSCCCEEEEE
T ss_pred eEEEEEcCCCCeEEEEEECC-CcEEEEEEecCC-cc-cCCCceeE-----CHHHHHHHHHHHHHHHH--hcCCCEEEEe
Confidence 68999999999999999977 788876543321 11 22232221 12233344444444432 2578898876
No 93
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=81.59 E-value=3.9 Score=36.84 Aligned_cols=44 Identities=11% Similarity=0.181 Sum_probs=27.4
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCc---EEEccCCCCCChhHHHHHHHHH
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNY---TVFYPKKEFCTDNGAMIAFAGA 313 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~---~v~~~~~~~~~D~G~aiG~a~~ 313 (339)
.+..|+|+||.+.- +.+.+.+.+ +. ++.+++. -+-+.++|++.+
T Consensus 272 ~~~~vvl~GGga~l--l~~~l~~~~---~~~~~~~~~~~~---P~~a~A~G~~~~ 318 (320)
T 2zgy_A 272 GYTHVMVIGGGAEL--ICDAVKKHT---QIRDERFFKTNN---SQYDLVNGMYLI 318 (320)
T ss_dssp CCCEEEEESTTHHH--HHHHHHHTS---CCCGGGEECCSC---GGGHHHHHHHHH
T ss_pred CCCeEEEECChHHH--HHHHHHHHh---CCCCCceeeCCC---cHHHHHHHHHHh
Confidence 46799999999974 666665543 33 3555542 245566676654
No 94
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=81.56 E-value=25 Score=30.37 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=60.6
Q ss_pred CEEEEEecCCCceeEEEEEC-CCCceeEEE-EeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEE
Q psy9394 1 MIILGIESSCDDSGLALYDT-HIKNLRSHV-ICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIA 78 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~-~~~~i~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia 78 (339)
|+++|||.+.+.+.+++++. + ++++.+. +... . .. .......+.+...++.++++.+. ...+..|+
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~-g~i~~~~~~~~~---~-~~------~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKK-GKLLGERFRVPT---P-QP------ATPESVAEAVALVVAELSARPEA-PAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTT-TEEEEEEEEEEC---C-SS------CCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEECCC-CeEEEEEEecCC---C-cc------CCHHHHHHHHHHHHHHHHHhccc-cCccceEE
Confidence 67899999999999999984 3 3666432 2211 0 00 00123345566677777664431 12334455
Q ss_pred EeCCCCCCc--------hh---HHHHHHHHHHHHhcCCCEEeecchhHHhhhcc
Q psy9394 79 YTRGPGLPG--------SL---LVGSSIACSIALSINKPVIGINHLEGHLLSPF 121 (339)
Q Consensus 79 ~~~gPG~~t--------~l---r~g~~~ak~la~~~~~p~~~v~h~~aHa~s~~ 121 (339)
++. ||... .+ ..+..+.+.+....++|++-.+--.|.+++-+
T Consensus 80 i~~-pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~ 132 (267)
T 1woq_A 80 VTF-PGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEA 132 (267)
T ss_dssp EEE-SSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHH
T ss_pred EEc-cceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHH
Confidence 431 33320 11 11233456677778999888787777766643
No 95
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=81.54 E-value=9.4 Score=32.81 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=52.5
Q ss_pred EEEEEecCCCc-----eeEEEEECCCCceeEEEEeeecccccccC-CccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcC
Q psy9394 2 IILGIESSCDD-----SGLALYDTHIKNLRSHVICSQNLVHKEYG-GVVPELAARTHIQTIIPLLSKLLKNSNLELKKID 75 (339)
Q Consensus 2 ~iLgidts~~~-----~~~al~~~~~~~i~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did 75 (339)
.|.|+|.|..+ +++++++-...+++... ....+..-||+ |.+ .++.++ .+-+++++... ++|
T Consensus 38 ~VaGvDvsy~~~~~a~aa~Vvl~~~~~~~v~~~-~~~~~~~~PYIPG~L-------aFRE~P-~~l~al~~L~~---~Pd 105 (225)
T 2w36_A 38 YVAGVALSFPGKEEGLAVIVVLEYPSFKILEVV-SERGEITFPYIPGLL-------AFREGP-LFLKAWEKLRT---KPD 105 (225)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEETTTTEEEEEE-EEEEECCSCCCTTCT-------HHHHHH-HHHHHHTTCCS---CCS
T ss_pred EEEEEEeeeeCCCcEEEEEEEEECCCCcEEEEE-EEEecccCCcccchH-------HHhhhH-HHHHHHHhcCC---CCC
Confidence 46799998752 23344553313565432 23344556776 433 234454 34455665544 789
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecch
Q psy9394 76 IIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHL 113 (339)
Q Consensus 76 ~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~ 113 (339)
.|.||. -|..=.-|.|+ |--+....++|.++|---
T Consensus 106 lllvDG-~Gi~HpR~~Gl--A~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 106 VVVFDG-QGLAHPRKLGI--ASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp EEEEES-CSSSSTTSCCH--HHHHHHHHTSCEEEEESS
T ss_pred EEEEeC-eEEEcCCCCCc--hhhhhhhhCCCEEEEEec
Confidence 999983 23321123333 444556678999887543
No 96
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=79.40 E-value=1.9 Score=42.84 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=40.8
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcC
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNY 320 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~ 320 (339)
.++.|+|+||.+....+.+.+.+.+ +.++..+ ..-|..++.|++.+.....|.
T Consensus 333 ~i~~VvLvGG~srip~v~~~l~~~f---g~~~~~~---~npd~aVA~GAa~~a~~l~~~ 385 (605)
T 2kho_A 333 DIDDVILVGGQTRMPMVQKKVAEFF---GKEPRKD---VNPDEAVAIGAAVQGGVLTGD 385 (605)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHH---SSCCBCS---SCTTTHHHHHHHHHHTTTTTS
T ss_pred hCceEEEECCcccChHHHHHHHHhc---CCCcCcC---CCcchHHHHHHHHHHHHhcCC
Confidence 3679999999999999999999887 3333333 234788999999888666654
No 97
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=78.30 E-value=6.5 Score=31.08 Aligned_cols=90 Identities=12% Similarity=-0.005 Sum_probs=53.3
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEE--EEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSH--VICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAY 79 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~ 79 (339)
.+||||-++..+++|+.+.. + .++. +.+.+.+ .......+.+++++- +++.|++
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~-~~A~pl~ti~~~~-----------------~~~~~~~l~~li~e~-----~v~~iVv 59 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-T-GTARPLPAIKAQD-----------------GTPDWNIIERLLKEW-----QPDEIIV 59 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-T-TEEEEEEEEEEET-----------------TEECHHHHHHHHHHH-----CCSEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-C-CEEeeEEEEEcCC-----------------cchHHHHHHHHHHHc-----CCCEEEE
Confidence 58999999999999999976 3 4443 2221100 001123344444432 6788888
Q ss_pred eC--C-CCCCc-hhHHHHHHHHHHHHhcCCCEEeecchhH
Q psy9394 80 TR--G-PGLPG-SLLVGSSIACSIALSINKPVIGINHLEG 115 (339)
Q Consensus 80 ~~--g-PG~~t-~lr~g~~~ak~la~~~~~p~~~v~h~~a 115 (339)
+. . -|..+ ..+....|++.|....++|+..+++...
T Consensus 60 GlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlT 99 (138)
T 1nu0_A 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLS 99 (138)
T ss_dssp EEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_pred ecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 61 1 13221 1333455778887777899888776543
No 98
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=78.26 E-value=11 Score=34.68 Aligned_cols=28 Identities=0% Similarity=-0.103 Sum_probs=23.1
Q ss_pred CEEEEEecCCCceeEEEEEC----CCCceeEEE
Q psy9394 1 MIILGIESSCDDSGLALYDT----HIKNLRSHV 29 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~----~~~~i~~~~ 29 (339)
|++||||.+.+.+.+++++. + ++++...
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~-g~il~~~ 60 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDS-VHACVTR 60 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGC-EEEEEEE
T ss_pred CeEEEEEEccccEEEEEEecccCCC-ccEEEEe
Confidence 57899999999999999986 5 5677654
No 99
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=75.87 E-value=2.6 Score=39.51 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=42.1
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCC--CCcCEEE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLEL--KKIDIIA 78 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~--~did~ia 78 (339)
|+||.|+.++.+++++|++.+..+++++...+++ |..+ ...|.+. ...+...|.+.++.. .++++|+
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~e~i-------g~~~---~~dh~~a-~~~il~~L~~~~~~~~~~~i~aVG 91 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPASGEFLADGIIEEI-------GSGA---VPDHDAA-LRAAFDELAAAGLHLEDLDLKAVG 91 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTTTCCEEEEEEECST-------TBTT---BCSHHHH-HHHHHHHHHHTTCCGGGSCEEEEE
T ss_pred ccEEEEeCCchhheEEEEECCCCceeeeeeeeec-------CCCC---ccCHHHH-HHHHHHHHHHcCCCccccceeEEe
Confidence 6899999999999999998651236665443332 2111 0124443 344555566777654 6788886
Q ss_pred E
Q psy9394 79 Y 79 (339)
Q Consensus 79 ~ 79 (339)
.
T Consensus 92 h 92 (398)
T 4ijn_A 92 H 92 (398)
T ss_dssp E
T ss_pred c
Confidence 4
No 100
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=75.47 E-value=22 Score=30.66 Aligned_cols=95 Identities=17% Similarity=0.251 Sum_probs=51.7
Q ss_pred EEEEEecCCCc------eeEEEEECCCCceeEEEEeeecccccccC-CccchHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Q psy9394 2 IILGIESSCDD------SGLALYDTHIKNLRSHVICSQNLVHKEYG-GVVPELAARTHIQTIIPLLSKLLKNSNLELKKI 74 (339)
Q Consensus 2 ~iLgidts~~~------~~~al~~~~~~~i~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~di 74 (339)
.|.|+|.+..+ +++++++-...+++... ....+..-||+ |.+- ++.++ .+-+++++... ++
T Consensus 41 ~VaGvDvsy~~~~~~~~Aa~Vvl~~~~l~~v~~~-~~~~~~~~PYIPG~La-------FRE~P-~ll~al~~L~~---~P 108 (237)
T 3goc_A 41 RVTGVDVAYDDERDVVVAAAVVLDAATLDVVAEA-TAVGEVSFPYVPGLLA-------FREIP-TVLAALDALPC---PP 108 (237)
T ss_dssp EEEEEEEEECSSSSEEEEEEEEEETTTCCEEEEE-EEEEECCSCCCTTCGG-------GGTHH-HHHHHHHTSSS---CC
T ss_pred EEEEEEEEeecCCceEEEEEEEEECCCCcEEEEE-EEeccccCCCCcchhh-------hhhHH-HHHHHHHhcCC---CC
Confidence 47899987631 33444553313565432 23334555776 4332 23344 34445665443 79
Q ss_pred CEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeec
Q psy9394 75 DIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGIN 111 (339)
Q Consensus 75 d~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (339)
|.|.||. -|..=--|.|+ |--+....++|.++|-
T Consensus 109 dlllvDG-~GiaHPRr~Gl--AsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 109 GLIVCDG-YGVAHPRRFGL--ASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SEEEEES-CSSCSTTSCCH--HHHHHHHHCSCEEEEE
T ss_pred CEEEEeC-ceeecCCCcch--hheeeeecCCCEEeee
Confidence 9999984 33332223333 4455666789998873
No 101
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=74.35 E-value=6.7 Score=37.59 Aligned_cols=26 Identities=12% Similarity=0.151 Sum_probs=21.7
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSH 28 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~ 28 (339)
++||||.++..++++|++.+ ++++..
T Consensus 5 ~~lgiDiGtts~k~~l~d~~-g~~~~~ 30 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYE-RECRSL 30 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEE-GGGTEE
T ss_pred eEEEEEecCCCceEEEEEec-CccceE
Confidence 58999999999999999865 566653
No 102
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=74.29 E-value=61 Score=30.80 Aligned_cols=126 Identities=10% Similarity=0.035 Sum_probs=65.6
Q ss_pred EEEEEecCCCceeEEEEECCCCce---eEEEEeeecccccc-cCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNL---RSHVICSQNLVHKE-YGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDII 77 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i---~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~i 77 (339)
.+||||.+...+.+++++.+ +++ +....+ ++..+ ..| ...+.+..+...+..++++.+.+..+.-.+
T Consensus 62 ~~laiDlGGTnirv~lV~~~-G~~~~~~~~~~~---~ip~~~~~~-----~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~l 132 (457)
T 2yhx_A 62 SFLAIVMGGGDLEVILISLA-GRQESSIXASRS---LAAAMSTTA-----IPSDLWGNXAXSNAAFSSXEFSSXAGSVPL 132 (457)
T ss_dssp EEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEE---CCTTTTSCS-----CTHHHHHHHHHHHHHHHHHHTSSCSSCEEE
T ss_pred eEEEEEeCCCeEEEEEEEeC-CCeeEEEeeEEE---EcCCccCCC-----CHHHHHHHHHHHHHHHHhhcccccccccce
Confidence 46999999999999999865 456 222211 11111 001 124556667777888777654432233233
Q ss_pred EEeC-CCCCCchhH------H--HH------HHHHHHHHhc---CCC---EEeecchhHHhhhccccCCCCCCcEEEEEE
Q psy9394 78 AYTR-GPGLPGSLL------V--GS------SIACSIALSI---NKP---VIGINHLEGHLLSPFLSNNSLTFPFIALLV 136 (339)
Q Consensus 78 a~~~-gPG~~t~lr------~--g~------~~ak~la~~~---~~p---~~~v~h~~aHa~s~~~~s~~~~~~~~~l~~ 136 (339)
+++. .|+.-+.+. - +. .+.+.|.... ++| +.-++--.+-+++..+... ...+++++
T Consensus 133 Gi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~---~~~iglil 209 (457)
T 2yhx_A 133 GFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDA---XIKMGIIF 209 (457)
T ss_dssp EEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCT---TEEEEEEE
T ss_pred eeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCC---ccEEEEEE
Confidence 4433 466521111 0 11 2223333333 578 5566666666666666432 35566666
Q ss_pred eCC
Q psy9394 137 SGG 139 (339)
Q Consensus 137 dGg 139 (339)
.=|
T Consensus 210 GTG 212 (457)
T 2yhx_A 210 GSG 212 (457)
T ss_dssp SSS
T ss_pred CcE
Confidence 533
No 103
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=74.24 E-value=17 Score=31.60 Aligned_cols=95 Identities=20% Similarity=0.295 Sum_probs=51.4
Q ss_pred EEEEEecCCCc--------eeEEEEECCCCceeEEEEeeecccccccC-CccchHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy9394 2 IILGIESSCDD--------SGLALYDTHIKNLRSHVICSQNLVHKEYG-GVVPELAARTHIQTIIPLLSKLLKNSNLELK 72 (339)
Q Consensus 2 ~iLgidts~~~--------~~~al~~~~~~~i~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~ 72 (339)
.|-|+|.|... +++++++-...+++.+. ....++.-||+ |.+- ++.++ .+-+++++...
T Consensus 41 ~VaGvDvsy~~~~~~~~~~aa~Vvl~~~~l~vv~~~-~~~~~~~~PYIPG~La-------FRE~P-~ll~al~~L~~--- 108 (246)
T 3ga2_A 41 TTAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKV-HSMGRISVPYVSGFLA-------FRELP-LIIEAAKKLET--- 108 (246)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEE-EEEEECCCCSSSSCGG-------GGTHH-HHHHHHHHCSS---
T ss_pred EEEEEEeeeecCCCCeEEEEEEEEEECCCCcEEEEE-EEEcccCCCCCCCchh-------hhhHH-HHHHHHHhcCC---
Confidence 47799998731 23444553313566433 23344555776 5443 23344 33344555443
Q ss_pred CcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeec
Q psy9394 73 KIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGIN 111 (339)
Q Consensus 73 did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (339)
++|.|.||. -|..=.-|.|+ |--+....++|.++|-
T Consensus 109 ~PdlllvDG-~GiaHPRr~Gl--AsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 109 EPDVFLFDG-NGYLHYNHMGV--ATHAAFFLGKPTIGIA 144 (246)
T ss_dssp CCSCEEEEB-CSSSSTTSCCH--HHHHHHHHTSCEEEEE
T ss_pred CCCEEEEcC-cEEecCCCcch--hheeeeecCCCEEeee
Confidence 789999984 34332223333 4455666788988873
No 104
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=72.23 E-value=4.7 Score=37.66 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=42.4
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCC--CCcCEEE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLEL--KKIDIIA 78 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~--~did~ia 78 (339)
|+||.|++++.+.+.+|++-...+++++-..+++... ..+ ...|.+.+ ..+-..|.+.++.. +++++|+
T Consensus 12 M~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~ig~~-----~~~---~~~h~~a~-~~il~~L~~~~~~~~~~~i~aVG 82 (391)
T 3r9p_A 12 RRVLVINSGSSSLKFQLVDPEFGVAASTGIVERIGEE-----SSP---VPDHDAAL-RRAFDMLAGDGVDLNTAGLVAVG 82 (391)
T ss_dssp CEEEEEEECSSCEEEEEEETTTTEEEEEEEECCTTCT-----TCS---CCSHHHHH-HHHHHHHHHTTCCTTTTTEEEEE
T ss_pred ceEEEEecCchhheeEEEecCCCceEEEEEEeecCCC-----ccC---ccCHHHHH-HHHHHHHHhcCCCCcccceeEEe
Confidence 8999999999999999998431356665544443111 011 12344443 34445566666544 6788886
Q ss_pred E
Q psy9394 79 Y 79 (339)
Q Consensus 79 ~ 79 (339)
.
T Consensus 83 h 83 (391)
T 3r9p_A 83 H 83 (391)
T ss_dssp E
T ss_pred c
Confidence 4
No 105
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=70.92 E-value=8.5 Score=36.00 Aligned_cols=51 Identities=22% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcchhhh-HHHHHHHHHHHHhCC
Q psy9394 240 RGFLDAIIDVLTFKCIAALKN-TGINKLVVVGGVGAN-KQLRKKLNILKKQYN 290 (339)
Q Consensus 240 a~~q~~l~~~l~~~~~~~~~~-~~~~~v~laGGVa~N-~~l~~~l~~~l~~~~ 290 (339)
.-+.+.+...+.+-+..+... .|++.|+|+||++-| ..+++++.+.++--|
T Consensus 303 ~lA~d~f~yri~k~IGa~aa~L~GvDaIVFTgGIGEns~~vR~~i~~~l~~lG 355 (404)
T 4h0o_A 303 QLAFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAICDKMKFLG 355 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHHHCHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccccCcHHHHHHHHhhhhhcC
Confidence 333444444444444333322 479999999999988 778888887765333
No 106
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=68.35 E-value=16 Score=34.07 Aligned_cols=51 Identities=18% Similarity=0.072 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcchhhhHH-HHHHHHHHHHhCC
Q psy9394 240 RGFLDAIIDVLTFKCIAALKNT-GINKLVVVGGVGANKQ-LRKKLNILKKQYN 290 (339)
Q Consensus 240 a~~q~~l~~~l~~~~~~~~~~~-~~~~v~laGGVa~N~~-l~~~l~~~l~~~~ 290 (339)
.-+.+.+...+.+-+..+.... +++.|+|+||++-|.. +++++.+.++--|
T Consensus 300 ~la~d~f~yriak~Iga~aa~LG~vDaIVfTGGIgEns~~vr~~I~~~l~~lG 352 (398)
T 4ijn_A 300 KLAYDVYIHRLRKYIGAYMAVLGRTDVISFTAGVGENVPPVRRDALAGLGGLG 352 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCccccccHHHHHHHHHHHhhcC
Confidence 3344444445554444444444 7899999999998866 8888887665334
No 107
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=68.30 E-value=23 Score=33.26 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCeEEEEcchh-hhHHHHHHHHHHHHhCCc-----------------------EEEccC
Q psy9394 243 LDAIIDVLTFKCIAALKNT-GINKLVVVGGVG-ANKQLRKKLNILKKQYNY-----------------------TVFYPK 297 (339)
Q Consensus 243 q~~l~~~l~~~~~~~~~~~-~~~~v~laGGVa-~N~~l~~~l~~~l~~~~~-----------------------~v~~~~ 297 (339)
.+.+..++.+-+..+.... +++.|+|+||++ -+..+++++.+.++--|+ ++++-
T Consensus 302 ~d~f~yri~k~IGa~~a~LggvDaiVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~Is~~~s~v~V~Vi- 380 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNKIRGQEIDISTPDAKVRVFVI- 380 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHHHHCHHHHHHHHTTCGGGTCCBCTTGGGCCSSCEECBCTTCSSEEEEC-
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEEECccccccCHHHHHHHHhhhhhhCccccHhhhhccCccceecCCCCCceEEEE-
Confidence 3334444444443333333 689999999999 667778888776654341 34444
Q ss_pred CCCCChhHHHHHHHHHHHHHh
Q psy9394 298 KEFCTDNGAMIAFAGAMRIEN 318 (339)
Q Consensus 298 ~~~~~D~G~aiG~a~~~~~~~ 318 (339)
++|.=.+|+.-+++.++.
T Consensus 381 ---Pt~Eel~IA~~~~~~l~~ 398 (408)
T 1g99_A 381 ---PTNEELAIARETKEIVET 398 (408)
T ss_dssp ---CCCHHHHHHHHHHHHHHC
T ss_pred ---CChHHHHHHHHHHHHHhC
Confidence 366689999888887653
No 108
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=66.83 E-value=13 Score=34.94 Aligned_cols=52 Identities=8% Similarity=0.069 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCeEEEEcchhhhHHHHHHHHHHH
Q psy9394 234 EKANIARGFLDAIIDVLTFKCIAALKNTG-----------INKLVVVGGVGANKQLRKKLNILK 286 (339)
Q Consensus 234 ~~~diAa~~q~~l~~~l~~~~~~~~~~~~-----------~~~v~laGGVa~N~~l~~~l~~~l 286 (339)
+..+++.-++..+++ +++.+++..+.++ ...|+|+||.++=..+.+.+.+.+
T Consensus 290 s~~~l~~ii~p~vee-i~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~ 352 (419)
T 4a2a_A 290 TAKKLSVIIHARLRE-IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF 352 (419)
T ss_dssp EHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH
Confidence 344444444444333 3344444454444 357999999999999999999987
No 109
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=65.63 E-value=5.7 Score=35.20 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=47.1
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+++|||.+...+.++|++ + ++++...+.... +....| + ....+.+...+++++ +..++..|+++
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~-g~il~~~~~~~~--~~~~~~--~----~~~~~~i~~~i~~~~-----~~~~i~~igig- 64 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-N-GAVIKRLGTKGI--NPFFQS--E----EEIQQKLTASLLPQL-----PEGKFNAVYFY- 64 (291)
T ss_dssp ---CEECCTTCEEEEEEC-S-SSEEEEEEECCC--CTTTSC--S----TTTTTTTTC------------------CEEE-
T ss_pred CEEEEEeccccEEEEEEc-C-CeEEEEEECCCC--CcccCC--H----HHHHHHHHHHHHHhc-----CcccccEEEEE-
Confidence 368999999999999999 5 578876443110 000000 0 011122333444433 22356777765
Q ss_pred CCCCCchhHHHHHHHHHHHHhcC--CCEEeecchhHHhhhc
Q psy9394 82 GPGLPGSLLVGSSIACSIALSIN--KPVIGINHLEGHLLSP 120 (339)
Q Consensus 82 gPG~~t~lr~g~~~ak~la~~~~--~p~~~v~h~~aHa~s~ 120 (339)
-||.. ...+..+.+.+...++ .|+.-.+.-.+-+++.
T Consensus 65 ~pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 65 GAGCT--PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp CTTCC--TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred cCCCC--HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 46653 1112244556666677 4877667766665554
No 110
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=65.41 E-value=19 Score=33.61 Aligned_cols=49 Identities=14% Similarity=0.088 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-CCCeEEEEcchhhh-HHHHHHHHHHHHhCC
Q psy9394 242 FLDAIIDVLTFKCIAALKNT-GINKLVVVGGVGAN-KQLRKKLNILKKQYN 290 (339)
Q Consensus 242 ~q~~l~~~l~~~~~~~~~~~-~~~~v~laGGVa~N-~~l~~~l~~~l~~~~ 290 (339)
+.+.+...+.+-+..+.... +++.|+|+||++-| ..+++++.+.++--|
T Consensus 293 A~d~f~yri~k~Iga~aa~Lg~vDaIVfTGGIgens~~vR~~i~~~l~~lG 343 (391)
T 3r9p_A 293 AYSVFTHRLRKYIGAYLAVLGHTDVISFTAGIGENDAAVRRDAVSGMEELG 343 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEECcccccCCHHHHHHHHHHHHhcC
Confidence 33444444444444433333 78999999999998 558888877665434
No 111
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=65.27 E-value=23 Score=33.33 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCeEEEEcchh-hhHHHHHHHHHHHHhCCc-------------------------EEEc
Q psy9394 243 LDAIIDVLTFKCIAALKNT-GINKLVVVGGVG-ANKQLRKKLNILKKQYNY-------------------------TVFY 295 (339)
Q Consensus 243 q~~l~~~l~~~~~~~~~~~-~~~~v~laGGVa-~N~~l~~~l~~~l~~~~~-------------------------~v~~ 295 (339)
.+.+...+.+-+..+.... +++.|+|+||++ -+..+++++.+.++--|+ +|++
T Consensus 310 ~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~~~Is~~~s~v~V~V 389 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAV 389 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTTGGGTCCBCHHHHHSCGGGCSEECBCTTCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhHhhcCccccHhHhcccccCCCceeeCCCCCceEEE
Confidence 3344444444444333333 589999999999 667788888877654442 3554
Q ss_pred cCCCCCChhHHHHHHHHHHHH
Q psy9394 296 PKKEFCTDNGAMIAFAGAMRI 316 (339)
Q Consensus 296 ~~~~~~~D~G~aiG~a~~~~~ 316 (339)
-| +|.=.+|+.-+++.+
T Consensus 390 iP----tnEEl~IA~~~~~ll 406 (415)
T 2e1z_A 390 IP----TNEEKMIALDAIHLG 406 (415)
T ss_dssp CC----CCHHHHHHHHHHHHT
T ss_pred EC----ChHHHHHHHHHHHHh
Confidence 43 666679998888864
No 112
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=64.75 E-value=7.7 Score=36.07 Aligned_cols=50 Identities=16% Similarity=0.282 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-hCCCeEEEEcchhhhHH-HHHHHHHHHHhCCc
Q psy9394 242 FLDAIIDVLTFKCIAALKN-TGINKLVVVGGVGANKQ-LRKKLNILKKQYNY 291 (339)
Q Consensus 242 ~q~~l~~~l~~~~~~~~~~-~~~~~v~laGGVa~N~~-l~~~l~~~l~~~~~ 291 (339)
+.+.+...+.+-+..+... .+++.|+|+||++-|.. +++++.+.++--|+
T Consensus 292 A~d~f~yri~k~IGa~aa~L~gvDaIVFTgGIgEns~~iR~~i~~~l~~lGi 343 (384)
T 3khy_A 292 AIEIFSHRVAKFVASYMIYFNKLDALVFTGGIGENAANIRKNIISKLANLGF 343 (384)
T ss_dssp HHHHHHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHCHHHHHHHHHHTGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEECCccccCcHHHHHHHHhhcccccE
Confidence 3344444444444433333 27899999999998855 88888887754444
No 113
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=62.59 E-value=13 Score=34.15 Aligned_cols=50 Identities=10% Similarity=0.092 Sum_probs=35.9
Q ss_pred CCeEEEEcchhhhHHHHHHHHHHHHhC-----CcEEEccCCCCCChhHHHHHHHHHHH
Q psy9394 263 INKLVVVGGVGANKQLRKKLNILKKQY-----NYTVFYPKKEFCTDNGAMIAFAGAMR 315 (339)
Q Consensus 263 ~~~v~laGGVa~N~~l~~~l~~~l~~~-----~~~v~~~~~~~~~D~G~aiG~a~~~~ 315 (339)
.++|+|+||.++=..+.++|.+.+... .++++.++. -+-++.+|.+.+..
T Consensus 294 ~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~---p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE---RKYSVWIGGSILAS 348 (375)
T ss_dssp HTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTT---TTSHHHHHHHHHHH
T ss_pred HhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCC---CCccEEcchHHhhC
Confidence 367999999999999999999888631 245655542 24567778776664
No 114
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=62.53 E-value=20 Score=35.14 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=45.5
Q ss_pred CEEEEEecCCCceeEEEE--ECCCCce--eEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCE
Q psy9394 1 MIILGIESSCDDSGLALY--DTHIKNL--RSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDI 76 (339)
Q Consensus 1 M~iLgidts~~~~~~al~--~~~~~~i--~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ 76 (339)
-+|.|||.++.++-+||- +++ +++ +++... +..|..-+ +++......+++++++++|++.+|++.
T Consensus 2 ~~i~gvdign~tte~~la~~~~~-~~~~f~~s~~~-------~ttg~kgt---~~n~~g~~~~l~~~~~~~~~~~~~~~l 70 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEA-GALTITHSALA-------ETTGIKGT---LRNVFGIQEALALVARGAGIAVSDISL 70 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTT-CCEEEEEEEEE-------ECCSSTTS---TTHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred cEEEEEecCCcchheeeeeecCC-CceEEeecccc-------ccCCccCc---HHHHHHHHHHHHHHHHHcCCChhhcee
Confidence 068999999888888875 442 333 333221 22343333 344566778999999999999999999
Q ss_pred EEE
Q psy9394 77 IAY 79 (339)
Q Consensus 77 ia~ 79 (339)
|-.
T Consensus 71 ir~ 73 (610)
T 2d0o_A 71 IRI 73 (610)
T ss_dssp EEE
T ss_pred eee
Confidence 643
No 115
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=60.30 E-value=36 Score=31.83 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=24.9
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeee
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQ 33 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~ 33 (339)
|+||.|+.++.+++++|++-..++.+++...++
T Consensus 1 M~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 1 MRVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp CEEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred CeEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 899999999999999999832025666554444
No 116
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=58.99 E-value=22 Score=32.42 Aligned_cols=31 Identities=13% Similarity=-0.030 Sum_probs=26.0
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEc
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFY 295 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~ 295 (339)
.++.|+|+||.++...+.+.+.+.+ +.++.+
T Consensus 306 ~~~~IvL~GG~s~~p~l~~~l~~~l---~~~v~~ 336 (377)
T 2ych_A 306 SPEVGYLLGGGSKLRGLASLLTDTL---GVNLEP 336 (377)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHH---TSEEEE
T ss_pred CcCEEEEECccccchhHHHHHHHHh---CCCeEe
Confidence 4689999999999999999999987 455444
No 117
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=58.65 E-value=3 Score=37.10 Aligned_cols=45 Identities=7% Similarity=-0.025 Sum_probs=29.0
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHH
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAM 314 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~ 314 (339)
+...|++.|||+.+ +.+.+.+.+++...++.. +.|+|+ +|++.+.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~-----~~~a~~-~GAa~la 276 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGK-----ILQSPM-EGLIQYH 276 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEE-----ECSCTH-HHHHTTS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEee-----cCCCHH-HHHHHHH
Confidence 56789999999988 777888877642223321 234444 6766543
No 118
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=58.56 E-value=25 Score=27.87 Aligned_cols=51 Identities=20% Similarity=0.250 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeec
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGIN 111 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (339)
+.+...++.+|+++|+.+.+|+.|+.-.-----.+ ...++..+++|+..++
T Consensus 25 ~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~g-------L~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 25 EHLRALLERTLGEHGRSLAELDALASIDGKRDEPG-------LRQLATLLERPVHFLA 75 (145)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHH-------HHHHHHHHTSCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHH-------HHHHHHHhCCCcEEeC
Confidence 55778999999999999999999985421111112 2567778899988775
No 119
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=57.85 E-value=18 Score=32.51 Aligned_cols=96 Identities=10% Similarity=0.044 Sum_probs=60.2
Q ss_pred EEEEEecCCCceeEEEEE-CCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSCDDSGLALYD-THIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+++|||.+.+.+.++|++ ++ ++++...++.. ...+.+...++.++++.+. ++..|+++
T Consensus 15 ~~lgiDiGGT~i~~~l~dl~~-g~i~~~~~~~~-----------------~~~~~~~~~i~~~~~~~~~---~i~gigi~ 73 (332)
T 1sz2_A 15 YALVGDVGGTNARLALCDIAS-GEISQAKTYSG-----------------LDYPSLEAVIRVYLEEHKV---EVKDGCIA 73 (332)
T ss_dssp EEEEEEEETTEEEEEEEETTT-CCEEEEEEEEG-----------------GGCSCHHHHHHHHHHHSCC---CCCEEEEE
T ss_pred EEEEEEechhheEEEEEECCC-CcEEEEEEecC-----------------CCcCCHHHHHHHHHHhcCC---CccEEEEE
Confidence 589999999999999998 44 46765433211 0012344566777776652 67777765
Q ss_pred CCCCCCc---------hhHHHHHHHHHHHHhcCCC-EEeecchhHHhhhccc
Q psy9394 81 RGPGLPG---------SLLVGSSIACSIALSINKP-VIGINHLEGHLLSPFL 122 (339)
Q Consensus 81 ~gPG~~t---------~lr~g~~~ak~la~~~~~p-~~~v~h~~aHa~s~~~ 122 (339)
. ||... +.+ +. .+.+...+++| ++-.+-..|.+++-..
T Consensus 74 ~-pG~vd~~~~~~~nl~w~--~~-~~~l~~~~~~p~V~v~NDanaaalgE~~ 121 (332)
T 1sz2_A 74 I-ACPITGDWVAMTNHTWA--FS-IAEMKKNLGFSHLEIINDFTAVSMAIPM 121 (332)
T ss_dssp E-SSCCCSSEECCSSSCCC--EE-HHHHHHHHTCSEEEEEEHHHHHHHHGGG
T ss_pred E-eCceeCCEEeeeCCCCc--CC-HHHHHHHhCCCcEEEEeCHhHHhccccc
Confidence 2 44331 111 12 24566778898 8888888887777543
No 120
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=53.44 E-value=40 Score=33.53 Aligned_cols=77 Identities=18% Similarity=0.128 Sum_probs=49.7
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEe-eecccccccCCccchHHHHHH--------H-----HHHHHHHHHHHHhC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVIC-SQNLVHKEYGGVVPELAARTH--------I-----QTIIPLLSKLLKNS 67 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~-~~~~~~~~~~G~~~~~~~~~~--------~-----~~l~~~i~~~l~~~ 67 (339)
+-++||.+|.+..+.|++-..+++++.... +. ...||.|+-+-..... . +.+..+++++.+++
T Consensus 207 ~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~Np---Q~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~ 283 (631)
T 3zyy_X 207 FGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNK---QAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEH 283 (631)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECG---GGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccceeEEEEECCCCCEEEeecccCC---CCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 348999999999999998432478875421 11 1257777655422211 1 12234666777788
Q ss_pred CCCCCCcCEEEEeC
Q psy9394 68 NLELKKIDIIAYTR 81 (339)
Q Consensus 68 ~i~~~did~ia~~~ 81 (339)
|+++++|..+++..
T Consensus 284 ~i~~~~I~~~~v~G 297 (631)
T 3zyy_X 284 GVEKKEIMAAVVAG 297 (631)
T ss_dssp TCCGGGEEEEEEEE
T ss_pred CCCHHHeeEEEEEc
Confidence 99999998888764
No 121
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=48.85 E-value=29 Score=32.76 Aligned_cols=52 Identities=23% Similarity=0.238 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------CCCeEEEEcchhhh-HHHHHHHHHHHHhCC
Q psy9394 239 ARGFLDAIIDVLTFKCIAALKNT-------GINKLVVVGGVGAN-KQLRKKLNILKKQYN 290 (339)
Q Consensus 239 Aa~~q~~l~~~l~~~~~~~~~~~-------~~~~v~laGGVa~N-~~l~~~l~~~l~~~~ 290 (339)
|.-+.+.+...+.+-+..+.... +++.|+|+||++-| ..+++++.+.++--|
T Consensus 322 A~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~l~~lg 381 (438)
T 4h0p_A 322 AKLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKKLAWLG 381 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHHTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHhHhhcC
Confidence 44445555555555555444443 58999999999855 667778877765333
No 122
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=48.25 E-value=29 Score=32.49 Aligned_cols=26 Identities=23% Similarity=0.455 Sum_probs=21.0
Q ss_pred CCCeEEEEcchh-hhHHHHHHHHHHHH
Q psy9394 262 GINKLVVVGGVG-ANKQLRKKLNILKK 287 (339)
Q Consensus 262 ~~~~v~laGGVa-~N~~l~~~l~~~l~ 287 (339)
+++.|+|+||++ -+..+++++.+.++
T Consensus 322 gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 322 GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 689999999999 66677777776554
No 123
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=48.03 E-value=70 Score=28.66 Aligned_cols=30 Identities=13% Similarity=0.380 Sum_probs=20.0
Q ss_pred CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 263 INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 263 ~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
.+.|+|+||.|+= +.+.+.+.+ +.++.+++
T Consensus 279 ~~~IvltGGGA~l--~~~~l~~~~---~~~v~v~~ 308 (329)
T 4apw_A 279 LDSLIFIGGTTQK--LKEQISKTY---PNNSIITN 308 (329)
T ss_dssp CSEEEEESTTHHH--HHHHHHHHS---TTCEECCS
T ss_pred ccEEEEECChHHH--HHHHHHHHc---CCCCEecC
Confidence 4699999999974 445555543 44566664
No 124
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=47.96 E-value=41 Score=30.13 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCC
Q psy9394 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKP 106 (339)
Q Consensus 53 ~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p 106 (339)
.+.+++.++++|+++|++++|||.++. |++. .|+- +.++..+++|
T Consensus 223 ~~~~~~~i~~~l~~~gl~~~did~~v~--Hq~~---~~i~----~~~~~~lgl~ 267 (323)
T 3il3_A 223 VRELSNVVEETLLANNLDKKDLDWLVP--HQAN---LRII----TATAKKLEMD 267 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCCEEEE--CCSC---HHHH----HHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE--cCCC---HHHH----HHHHHHcCcC
Confidence 345678899999999999999999975 5543 2433 3444455554
No 125
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=47.66 E-value=81 Score=28.06 Aligned_cols=65 Identities=12% Similarity=0.135 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhCCCe-EEEEcchhhh-HHHH--HHHHHHHHhC--------CcEEEccCCCCCChhHHHHHHHHHH
Q psy9394 247 IDVLTFKCIAALKNTGINK-LVVVGGVGAN-KQLR--KKLNILKKQY--------NYTVFYPKKEFCTDNGAMIAFAGAM 314 (339)
Q Consensus 247 ~~~l~~~~~~~~~~~~~~~-v~laGGVa~N-~~l~--~~l~~~l~~~--------~~~v~~~~~~~~~D~G~aiG~a~~~ 314 (339)
.+.+...+..+....+.+. |++.||++.+ ..+. ..+++.+.++ ..++.+. .+|.+..+|++.+.
T Consensus 249 ~~~Lg~~i~~l~~~l~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~a~l~GAa~l~ 324 (332)
T 1sz2_A 249 CVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLI----VHDNPGLLGSGAHL 324 (332)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEE----CCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEE----ECCchhHHHHHHHH
Confidence 3334444444444456766 9999999864 3322 2344444321 1233322 25666678887765
Q ss_pred H
Q psy9394 315 R 315 (339)
Q Consensus 315 ~ 315 (339)
+
T Consensus 325 ~ 325 (332)
T 1sz2_A 325 R 325 (332)
T ss_dssp H
T ss_pred H
Confidence 4
No 126
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=47.45 E-value=35 Score=30.66 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPG 84 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG 84 (339)
+.+++.++++|+++|++++|||.++. |++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~--Hq~ 262 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIP--HQA 262 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE--CCS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE--cCC
Confidence 55678899999999999999999975 555
No 127
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=47.03 E-value=35 Score=35.56 Aligned_cols=57 Identities=5% Similarity=0.169 Sum_probs=35.1
Q ss_pred EEEEEecCCCceeEEEEECCCCc----e-eEEEEeeecccccccCCccchH----HHHHHHHHHHHHHHHHHHhCCCC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKN----L-RSHVICSQNLVHKEYGGVVPEL----AARTHIQTIIPLLSKLLKNSNLE 70 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~----i-~~~~~~~~~~~~~~~~G~~~~~----~~~~~~~~l~~~i~~~l~~~~i~ 70 (339)
.+||||.+...+.+++++.+ ++ + +...++. .|.. .....+..+...++.++++.++.
T Consensus 79 ~~laiDlGGTnirv~lv~~~-G~~~~~i~~~~~~~~-----------ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~ 144 (917)
T 1cza_N 79 DFIALDLGGSSFRILRVQVN-HEKNQNVHMESEVYD-----------TPENIVHGSGSQLFDHVAECLGDFMEKRKIK 144 (917)
T ss_dssp EEEEEEESSSSEEEEEEEEE-EETTEEEEEEEEEEC-----------CCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT
T ss_pred eEEEEEeCCCeEEEEEEEec-CCCcceEEEEEEEEE-----------CCcccccCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999765 43 4 3222221 1210 12345566667777777766553
No 128
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=45.36 E-value=47 Score=32.60 Aligned_cols=66 Identities=17% Similarity=0.222 Sum_probs=43.9
Q ss_pred CEEEEEecCCCceeEEEEECCCC--ceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIK--NLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDI 76 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~--~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ 76 (339)
-+|.|||.++..+.+++-+-+++ ++++.... +..|..-. .........++++++++++...+|++.
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~-------~ttGiKGt---~~Ni~g~~~si~~a~~~a~~~~~d~~l 69 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIV-------ATTGMKGT---RDNIAGTLAALEQALAKTPWSMSDVSR 69 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEE-------ECCSSTTS---GGGHHHHHHHHHHHHTTSSCCGGGEEE
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecc-------cCCcccee---eeCHHHHHHHHHHHHHHhCCcccCceE
Confidence 07899999999999888653212 34554322 12233222 334566778999999999998888887
No 129
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=45.29 E-value=36 Score=31.12 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCC
Q psy9394 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGL 85 (339)
Q Consensus 53 ~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~ 85 (339)
.+.+++.++++|+++|++++|||.++. |++.
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~--Hq~n 283 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVIC--HQPN 283 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEE--CCSC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE--CCCC
Confidence 345668999999999999999999975 5553
No 130
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=44.23 E-value=32 Score=32.32 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=42.5
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeEEEEeeecccccc---cCCccc-hHHHHHHHHHHHHHHHHHHHhCCCCCCCcCE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKE---YGGVVP-ELAARTHIQTIIPLLSKLLKNSNLELKKIDI 76 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~---~~G~~~-~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ 76 (339)
|+||.|+.++.+++++|++...++++++...+++..... +.|.-. ......|...+. .+-..|++.++. ++|++
T Consensus 18 ~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ig~~~~~l~~~~~~~~~~~~~dh~~a~~-~il~~L~~~~~~-~~i~a 95 (415)
T 2e1z_A 18 PVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPINLAHSNYEDALK-AIAFELEKRDLT-DSVAL 95 (415)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEESTTSSSCEEEETTSCCEECCSCCHHHHHH-HHHHHHHTTTCG-GGEEE
T ss_pred CeEEEEECCchhheEEEEECCCCCEEEEEEEEecCCCcceEEECCccccccCCCCHHHHHH-HHHHHHHhcCCc-cceeE
Confidence 589999999999999999863125776655554321100 001000 000012333333 344455666765 68888
Q ss_pred EEE
Q psy9394 77 IAY 79 (339)
Q Consensus 77 ia~ 79 (339)
|+.
T Consensus 96 VgH 98 (415)
T 2e1z_A 96 IGH 98 (415)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 131
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=44.19 E-value=60 Score=29.68 Aligned_cols=48 Identities=17% Similarity=0.155 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeC-CCCCCchhHHHHHHHHHHHHhcCCCEEeec
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYTR-GPGLPGSLLVGSSIACSIALSINKPVIGIN 111 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~~-gPG~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (339)
...+.+.+|+++|++++|||.|.+.. -|...++ . .++..+++|.+.|+
T Consensus 59 a~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~A----~----~va~~LgipafdV~ 107 (347)
T 3lma_A 59 MEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTA----N----YVARHLKIPFLCLF 107 (347)
T ss_dssp HHHHHHHHHHTTTCCGGGCSEEEEEESSSSSTTH----H----HHHHHHCCCEEEBC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCchhHH----H----HHHHHhCCCEEEec
Confidence 45789999999999999999998753 3522222 1 22233377877663
No 132
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=43.91 E-value=32 Score=31.80 Aligned_cols=28 Identities=18% Similarity=0.169 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...++.++|+++|++++|||.|.+..
T Consensus 31 ~L~~~a~~~Al~~agi~~~~Id~v~~g~ 58 (395)
T 4e1l_A 31 QLGTIAVKEAISRVGLNLSEIDEVIIGN 58 (395)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 4455789999999999999999998754
No 133
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=43.57 E-value=31 Score=31.92 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...+++.+|+++|++++|||.|.+..
T Consensus 33 ~L~~~A~~~AL~~agl~~~dId~vi~g~ 60 (396)
T 4dd5_A 33 ELGVTAAKEAIKRANITPDMIDESLLGG 60 (396)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 4455789999999999999999998764
No 134
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=42.52 E-value=32 Score=31.92 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=20.8
Q ss_pred CeEEEEcchhhhHHHHHHHHHHHHh
Q psy9394 264 NKLVVVGGVGANKQLRKKLNILKKQ 288 (339)
Q Consensus 264 ~~v~laGGVa~N~~l~~~l~~~l~~ 288 (339)
.+|+|+||.++=..+.++|.+.+..
T Consensus 317 ~~IvL~GG~s~~pg~~~rl~~el~~ 341 (418)
T 1k8k_A 317 KNIVLSGGSTMFRDFGRRLQRDLKR 341 (418)
T ss_dssp HCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred hceEEeCCccccccHHHHHHHHHHH
Confidence 5799999999998888888776643
No 135
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=42.43 E-value=38 Score=29.23 Aligned_cols=56 Identities=9% Similarity=0.104 Sum_probs=32.1
Q ss_pred HHHHHHhCCCeEEEEcchhhhH-HHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHh
Q psy9394 255 IAALKNTGINKLVVVGGVGANK-QLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIEN 318 (339)
Q Consensus 255 ~~~~~~~~~~~v~laGGVa~N~-~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~ 318 (339)
..+..-.+.+.|++.||++.+. .+.+.+. ...++.+.+ .++.+..+|++.+...+.
T Consensus 207 ~~l~~~ldP~~IvlgG~i~~~~~~~~~~~~-----~~~~i~~s~---l~~~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 207 SHVEFLFSPELFIVGGGISKRADEYLPNLR-----LRTPIVPAV---LRNEAGIVGAAIEIALQH 263 (267)
T ss_dssp HHHHHHHCCSEEEEESGGGGGGGGTGGGCC-----CSSCEEECS---CSTTHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEeChhhcccHHHHHhhc-----cCceEEECC---cCCcHHHHHHHHHHHhcc
Confidence 3334445788999999998753 2222221 123444443 355566788887765443
No 136
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=42.18 E-value=20 Score=33.74 Aligned_cols=49 Identities=18% Similarity=0.144 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-C-CCeEEEEcchhhhHHHH-HHHHHHHH
Q psy9394 239 ARGFLDAIIDVLTFKCIAALKNT-G-INKLVVVGGVGANKQLR-KKLNILKK 287 (339)
Q Consensus 239 Aa~~q~~l~~~l~~~~~~~~~~~-~-~~~v~laGGVa~N~~l~-~~l~~~l~ 287 (339)
|.-+.+.+..++.+-+..+.... | ++.|+|+||++-|.... +++.+.|+
T Consensus 314 A~lA~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 314 AKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhhch
Confidence 44444555555555555554444 5 79999999999876655 55655443
No 137
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=41.66 E-value=40 Score=30.66 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPG 84 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG 84 (339)
+.+++.++++|+++|++++|||.++. |++
T Consensus 244 ~~~~~~i~~~l~~~gl~~~did~~v~--Hq~ 272 (354)
T 4efi_A 244 NAVPKLVSRTLDIAGRDKDSYDAFLF--HQA 272 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEE--CCC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe--CCC
Confidence 45678899999999999999999986 554
No 138
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=41.55 E-value=2.5e+02 Score=28.66 Aligned_cols=96 Identities=15% Similarity=0.235 Sum_probs=52.0
Q ss_pred EEEEEecCC-CceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 2 IILGIESSC-DDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 2 ~iLgidts~-~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
.+||+|-+. +-+++|+++.. |+++...++-. |.+ .+..+.....+..++++. .++.||++
T Consensus 330 ~vlg~dpg~r~g~k~a~vd~~-G~~l~~~~iy~---~~~----------~~~~~~~~~~l~~li~~~-----~~~~IaIG 390 (785)
T 3bzc_A 330 ATLGLDPGLRTGVKVAVVDAT-GKLLDTATVYP---HAP----------KNQWDQTLAVLAALCAKH-----QVELIAIG 390 (785)
T ss_dssp CEEEEECCSSSCEEEEEECTT-SCEEEEEEECC---SGG----------GCCHHHHHHHHHHHHHHH-----TCCEEEEE
T ss_pred eEEEECCCCcCceEEEEECCC-CCEEEEEEEec---CCc----------hhHHHHHHHHHHHHHHHc-----CCCEEEEC
Confidence 489999985 55778888876 78887544311 111 011122223344444432 67899998
Q ss_pred CCCCCCchhHHHHHHHHHHHHh---cCCCEEeecchhHHhhhc
Q psy9394 81 RGPGLPGSLLVGSSIACSIALS---INKPVIGINHLEGHLLSP 120 (339)
Q Consensus 81 ~gPG~~t~lr~g~~~ak~la~~---~~~p~~~v~h~~aHa~s~ 120 (339)
.|.. -|-...+...+-.. ..+|.+.++.--|-++++
T Consensus 391 ngta----sret~~~v~~l~~~~~~~~i~~v~v~e~gArvy~a 429 (785)
T 3bzc_A 391 NGTA----SRETDKLAGELIKKYPGMKLTKIMVSEAGASVYSA 429 (785)
T ss_dssp SSTT----HHHHHHHHHHHHHHCGGGCCEEEEECCHHHHHHHH
T ss_pred CCcc----CHHHHHHHHHHHHhcccCCCCEEEEcCCcCCHHHH
Confidence 7543 24333333333222 346666677666555543
No 139
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=40.94 E-value=28 Score=31.43 Aligned_cols=44 Identities=9% Similarity=0.123 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKP 106 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p 106 (339)
..+++.++++|+++|++++|||.++. |++. .|+ .+.++..+++|
T Consensus 249 ~~~~~~i~~~L~~~gl~~~did~~v~--Hq~~---~~i----~~~~~~~Lgl~ 292 (350)
T 4ewp_A 249 WSMAKVAREALDAAGVEPEDLAAFIP--HQAN---MRI----IDEFAKQLKLP 292 (350)
T ss_dssp HTHHHHHHHHHHHHTCCGGGEEEEEE--CCSC---HHH----HHHHHHHTTCC
T ss_pred HhhhHHHHHHHHhhcCChhHhceEEe--cCCC---HHH----HHHHHHHcCcC
Confidence 34667899999999999999999975 6654 233 33444455554
No 140
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=40.90 E-value=53 Score=30.03 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCE
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPV 107 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~ 107 (339)
....|.+.|+++|++++|+|.|+-. .+| ++|....+.+....+.|+
T Consensus 209 A~~ti~~~l~d~g~~~~d~D~ivtg-dL~-----q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 209 AADTIKQHLEDLGRTPDDYDLILTG-DLS-----GVGSPILKDLLKEEGINV 254 (347)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEE-SCH-----HHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhCCCHHHcCEEecC-ChH-----HHHHHHHHHHHHHcCCCh
Confidence 3356789999999999999999742 233 677777888888888876
No 141
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=40.33 E-value=58 Score=31.97 Aligned_cols=49 Identities=14% Similarity=0.058 Sum_probs=36.6
Q ss_pred CeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC----CCCChhHHHHHHHHHH
Q psy9394 264 NKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK----EFCTDNGAMIAFAGAM 314 (339)
Q Consensus 264 ~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~----~~~~D~G~aiG~a~~~ 314 (339)
..|+|+||.++=.-+.+...+.|...+..+-.|.. -|. ++.+.|.+.|.
T Consensus 552 ~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~~gP~--fAtAvGLlly~ 604 (607)
T 1nbw_A 552 AFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPR--NAVATGLLLAG 604 (607)
T ss_dssp CEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGTSCSC--CHHHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCch--HHHHHHHHHhh
Confidence 67999999999999999999999765666666543 233 34666776655
No 142
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=39.14 E-value=42 Score=30.65 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCC
Q psy9394 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGL 85 (339)
Q Consensus 53 ~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~ 85 (339)
.+.+++.++++|+++|++++|||.++. |++.
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~--Hq~n 295 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVL--HQAN 295 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEE--CCCC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE--cCCC
Confidence 345678899999999999999999985 5553
No 143
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=38.52 E-value=35 Score=31.55 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...++..+|+++|++++|||.|.+..
T Consensus 31 ~L~~~A~~~Al~~agl~~~~Id~v~~g~ 58 (394)
T 3ss6_A 31 ELAVPVLQEAVKRGGVEPHEVDEVILGH 58 (394)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEEE
Confidence 4455789999999999999999998754
No 144
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=38.22 E-value=2e+02 Score=25.04 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=32.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcchhh
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTG-INKLVVVGGVGA 274 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~-~~~v~laGGVa~ 274 (339)
...+-+.+++-....-.+-.+++++.++.+ ...|+++||-+.
T Consensus 202 nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~~~~~vi~TGG~a~ 244 (271)
T 2f9w_A 202 ATAEAVERGCLLMLRGFVREQYAMACELLGPDCEIFLTGGDAE 244 (271)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEESTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH
Confidence 456667777777888888888888888886 458999999653
No 145
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=37.87 E-value=45 Score=30.04 Aligned_cols=29 Identities=3% Similarity=-0.054 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPG 84 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG 84 (339)
+.+++.++.+|+++|++++|||.++. |++
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v~--Hq~ 274 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFVI--HQV 274 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEEE--CCS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe--CCC
Confidence 34567889999999999999999986 554
No 146
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=37.59 E-value=56 Score=29.20 Aligned_cols=41 Identities=10% Similarity=0.171 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSI 99 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~l 99 (339)
+.+..+++++|+++|++++|||.|... + ++.|+...+.+.+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H--~---~~~~~~d~i~~~l 271 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPH--Q---ANLRIIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC--C---SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC--C---CCHHHHHHHHHHh
Confidence 456678999999999999999999763 3 3456655555544
No 147
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=36.35 E-value=2.6e+02 Score=29.43 Aligned_cols=99 Identities=7% Similarity=0.042 Sum_probs=51.4
Q ss_pred EEEEEecCCC-----ceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCCCCCcCE
Q psy9394 2 IILGIESSCD-----DSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLELKKIDI 76 (339)
Q Consensus 2 ~iLgidts~~-----~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~~~did~ 76 (339)
.+||||.+.. -+.+|+++.. |+++...++-. | ++ +.....+.. ..+..++++. .++.
T Consensus 520 ~VlaldpG~~~~~~~g~k~a~vd~~-G~~l~~~~i~~---~-~~----~~~~~~~~~----~~l~~li~~~-----~~~~ 581 (1030)
T 3psf_A 520 KILSLTCGQGRFGADAIIAVYVNRK-GDFIRDYKIVD---N-PF----DKTNPEKFE----DTLDNIIQSC-----QPNA 581 (1030)
T ss_dssp CEEEEECTTCCTTTSCEEEEEECTT-SCEEEEEEECS---C-TT----CSSCCHHHH----HHHHHHHHHH-----CCSE
T ss_pred eEEEecCCCCCCCCCCeEEEEECCC-CCEEEEEEEcC---C-CC----ChhhHHHHH----HHHHHHHHHc-----CCcE
Confidence 5899999875 3678888877 78887654311 0 11 000001111 2333444432 6789
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHH-------hcCCCEEeecchhHHhhhc
Q psy9394 77 IAYTRGPGLPGSLLVGSSIACSIAL-------SINKPVIGINHLEGHLLSP 120 (339)
Q Consensus 77 ia~~~gPG~~t~lr~g~~~ak~la~-------~~~~p~~~v~h~~aHa~s~ 120 (339)
||++. ++-.+-+.-..+.+.+.. ..+++++-|+.--|-++|+
T Consensus 582 IaIGn--~s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYsa 630 (1030)
T 3psf_A 582 IGING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQN 630 (1030)
T ss_dssp EEECC--SSTHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHHT
T ss_pred EEECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHHh
Confidence 99974 322122221112222221 1347888888887777664
No 148
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=35.48 E-value=58 Score=29.66 Aligned_cols=27 Identities=15% Similarity=0.343 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 55 TIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 55 ~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
-...+++++|+++|++++|||.|++..
T Consensus 77 La~~Aa~~aL~~agl~~~dId~vi~~t 103 (359)
T 3h78_A 77 LMVPAARQAIEAAGLLPEDIDLLLVNT 103 (359)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEEEe
Confidence 345789999999999999999988753
No 149
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=34.12 E-value=39 Score=30.33 Aligned_cols=28 Identities=11% Similarity=0.256 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...+.+++|+++|++++|||.|.+..
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~~t 94 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIVAT 94 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3345789999999999999999987754
No 150
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=34.07 E-value=67 Score=31.48 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=36.8
Q ss_pred CeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCC--hhHHHHHHHHHHH
Q psy9394 264 NKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCT--DNGAMIAFAGAMR 315 (339)
Q Consensus 264 ~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~--D~G~aiG~a~~~~ 315 (339)
..|+|+||.++=.-+.+...+.|...+..+-.|...... -++.+.|.+.|..
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 679999999999999999999887546666655431111 1346667766653
No 151
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=33.90 E-value=3.2e+02 Score=26.05 Aligned_cols=64 Identities=8% Similarity=-0.006 Sum_probs=34.3
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEEEEeeecccccccCCccchHHHHHHHHHHHHHHHHHHHhCCCC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSHVICSQNLVHKEYGGVVPELAARTHIQTIIPLLSKLLKNSNLE 70 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~i~~~l~~~~i~ 70 (339)
.+|+||.+...+.+++++.+ ++--.+......++.. .+......+-+..+...|...+++.+.+
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~-g~~~~~~~~~~~~Ip~----~~~~~~~~~lfd~Ia~~i~~fl~~~~~~ 144 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLG-GNHDFDTTQNKYRLPD----HLRTGTSEQLWSFIAKCLKEFVDEWYPD 144 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEE-SSSCEEEEEEEEECCT----TGGGSBHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEEEecCCeEEEEEEEEC-CCCceEEEEEEEecCc----hhccCCHHHHHHHHHHHHHHHHHHhccc
Confidence 47999999999999999754 3211111100011110 0111113455666667777777776543
No 152
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=33.74 E-value=46 Score=29.67 Aligned_cols=41 Identities=5% Similarity=0.099 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSI 99 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~l 99 (339)
+.+...++++|+++|++++|||.|.. |+. +.|+...+.+.+
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~--H~~---~~~~~d~~~~~l 264 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVP--HQA---NTRILAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEE--CCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE--cCC---CHHHHHHHHHHc
Confidence 45667899999999999999999976 332 345555544444
No 153
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=33.49 E-value=72 Score=29.49 Aligned_cols=41 Identities=2% Similarity=0.063 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSI 99 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~l 99 (339)
..+++.++++|+++|++++|||.++. ||+. .|+-..+++.+
T Consensus 291 ~~~~~~i~~~L~~~gl~~~dId~~v~--Hqan---~~i~~~~~~~l 331 (392)
T 3led_A 291 PLVSEMIIEHAREIGIDPHGLKRMWL--HQAN---INMNEIIGRKV 331 (392)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE--CSSC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEE--cCCC---HHHHHHHHHHh
Confidence 34567899999999999999999885 6653 35544455543
No 154
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=32.94 E-value=53 Score=26.75 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=24.7
Q ss_pred CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEE
Q psy9394 263 INKLVVVGGVGANKQLRKKLNILKKQYNYTVF 294 (339)
Q Consensus 263 ~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~ 294 (339)
.++|+++|| ..+....+.+.+..+. ++.|.
T Consensus 36 kRPvIl~Gg-v~~~~A~~eL~~~ae~-~iPVv 65 (174)
T 1ytl_A 36 KRPLLIVGP-DMTDEMFERVKKFVEK-DITVV 65 (174)
T ss_dssp SSEEEEECS-CCCHHHHHHHHHHHTS-SSEEE
T ss_pred CCCEEEECC-CCCccHHHHHHHHHHc-CCCEE
Confidence 589999999 8878888888777666 88876
No 155
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=32.84 E-value=34 Score=30.19 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhh--HHHHHHHH
Q psy9394 239 ARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGAN--KQLRKKLN 283 (339)
Q Consensus 239 Aa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N--~~l~~~l~ 283 (339)
|..+-+...+.+...+..+... ....|+++||++.+ ..+.+.+.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~~-~p~~VvlgGgv~~~~~~~l~~~l~ 273 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDPQ-DELPVALCGGLGQALRDWLPPGFR 273 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CCSCEEEESHHHHHTGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCeEEEECCchHhHHHHHHHHHH
Confidence 4444444444455544444433 56789999999854 33444443
No 156
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=31.69 E-value=1.6e+02 Score=24.85 Aligned_cols=23 Identities=9% Similarity=0.260 Sum_probs=19.1
Q ss_pred EEEEecCCCceeEEEEECCCCceeE
Q psy9394 3 ILGIESSCDDSGLALYDTHIKNLRS 27 (339)
Q Consensus 3 iLgidts~~~~~~al~~~~~~~i~~ 27 (339)
.+.||.+..++.+++++++ .++.
T Consensus 141 ~~viDiGggst~~~~~~~g--~~~~ 163 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEKG--KITA 163 (272)
T ss_dssp EEEEEECSSCEEEEEEETT--EEEE
T ss_pred EEEEEECCCcEEEEEEECC--EEEE
Confidence 3679999999999999988 5664
No 157
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=30.70 E-value=2.9e+02 Score=24.60 Aligned_cols=25 Identities=12% Similarity=0.228 Sum_probs=20.5
Q ss_pred EEEEEecCCCceeEEEEECCCCceeEE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRSH 28 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~~ 28 (339)
.++.+|.+..++.++++.++ .+++.
T Consensus 192 ~~~vvDiGggttdi~i~~~g--~~~~~ 216 (377)
T 2ych_A 192 VFLVLDIGAESTSLVLLRGD--KPLAV 216 (377)
T ss_dssp EEEEEEECSSCEEEEEEETT--EEEEE
T ss_pred eEEEEEECCCcEEEEEEECC--EEEEE
Confidence 36889999999999999988 56653
No 158
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=30.47 E-value=82 Score=25.40 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=30.3
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|++++++..
T Consensus 106 ~~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 143 (182)
T 3eef_A 106 RANGIDTVVLIGLDADICVRHTAADA--LYRNYRIIVVED 143 (182)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhcCCCeEEEEEeccCHHHHHHHHHH--HHCCCEEEEehh
Confidence 34589999999999999999887643 357999887753
No 159
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.47 E-value=52 Score=29.94 Aligned_cols=48 Identities=17% Similarity=0.232 Sum_probs=37.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHH
Q psy9394 233 KEKANIARGFLDAIIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKLN 283 (339)
Q Consensus 233 ~~~~diAa~~q~~l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~ 283 (339)
....++|..+.+...+.|.+.+++..++.++++|+.+||- ..|...+.
T Consensus 246 ~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~~vv~aG~G---~~L~~~la 293 (334)
T 3cet_A 246 IDAENIAKNYYELWKELILENVENVAEKYGSKKVVITGLG---ENILKDAL 293 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESTT---HHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeCCc---HHHHHHHH
Confidence 3467888888888888888888888888888899999963 35555443
No 160
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=30.12 E-value=81 Score=26.03 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=29.6
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.+...+.. .+.|+++++...
T Consensus 138 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 175 (207)
T 1nf9_A 138 RAAGRDQLVLCGVYAHVGVLISTVDA--YSNDIQPFLVAD 175 (207)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHcCCCEEEEEeeecChHHHHHHHHH--HHCCCEEEEeCc
Confidence 35689999999999998998776543 357999887753
No 161
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=30.10 E-value=49 Score=30.05 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
...+.+++|+++|++++|||.|.+..
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t 95 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVS 95 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 44788999999999999999988754
No 162
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=29.91 E-value=67 Score=29.51 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhC-CCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNS-NLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~-~i~~~did~ia~~~ 81 (339)
+-...++..+|+++ |++++|||.|.+..
T Consensus 29 ~L~~~a~~~Al~~a~gi~~~~Id~v~~g~ 57 (387)
T 3goa_A 29 DLSAHLMRSLLARNPSLTAATLDDIYWGC 57 (387)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEEc
Confidence 34557889999999 99999999998754
No 163
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=29.76 E-value=3.9e+02 Score=28.79 Aligned_cols=29 Identities=7% Similarity=-0.025 Sum_probs=21.7
Q ss_pred EEEEEecCCC-----ceeEEEEECCCCceeEEEEe
Q psy9394 2 IILGIESSCD-----DSGLALYDTHIKNLRSHVIC 31 (339)
Q Consensus 2 ~iLgidts~~-----~~~~al~~~~~~~i~~~~~~ 31 (339)
.|||||-+.. -+.+|+++.. |+++...++
T Consensus 517 ~VlaldpG~r~~g~~g~k~a~vD~~-G~vl~~~~i 550 (1219)
T 3psi_A 517 KILSLTCGQGRFGADAIIAVYVNRK-GDFIRDYKI 550 (1219)
T ss_dssp CEEEEECTTCCTTTTCEEEEEECTT-SCEEEEEEE
T ss_pred eEEEecCCCCCCCCCceEEEEECCC-CCEEEEEEE
Confidence 5899999875 3677888877 788876543
No 164
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=28.71 E-value=54 Score=29.88 Aligned_cols=72 Identities=13% Similarity=-0.011 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhC-----CCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcCCCC
Q psy9394 249 VLTFKCIAALKNTG-----INKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNYKSE 323 (339)
Q Consensus 249 ~l~~~~~~~~~~~~-----~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~~~~ 323 (339)
.+.+.+++++++.| ++.+++--+ |..+.+.+.+.|.-..-+++..=..+-|=++.++=.++..+++.|...+
T Consensus 267 ~~~~~i~~~L~~~gl~~~did~~v~Hq~---n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~~~~g~~~~ 343 (365)
T 3gwa_A 267 EVPRAADRLLALAGEPRENIDCFVLHQA---NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETMRANGTLAR 343 (365)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECCC---CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC---CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHHHHcCCCCC
Confidence 33444455555555 456776554 7777888887773211123222123556667777777777778776443
No 165
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=28.55 E-value=87 Score=28.44 Aligned_cols=24 Identities=0% Similarity=-0.096 Sum_probs=17.2
Q ss_pred CEEEEEecCCCceeEEEEECCCCceeE
Q psy9394 1 MIILGIESSCDDSGLALYDTHIKNLRS 27 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~~~~i~~ 27 (339)
|.++|||.+...+++ ..++ +.+++
T Consensus 4 ~~iigiD~G~~~~K~--~~~~-~~~~f 27 (355)
T 3js6_A 4 VYVMALDFGNGFVKG--KIND-EKFVI 27 (355)
T ss_dssp EEEEEEEECSSEEEE--EETT-EEEEE
T ss_pred cEEEEEEcCCCcEEE--ecCC-eEEEe
Confidence 579999999999994 4444 33444
No 166
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=28.54 E-value=2.8e+02 Score=25.61 Aligned_cols=24 Identities=13% Similarity=0.104 Sum_probs=20.0
Q ss_pred EEEEEecCCCceeEEEEECCCCceeE
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNLRS 27 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i~~ 27 (339)
.++.+|.+..++.++++.++ .++.
T Consensus 207 gv~vvDiGggttdisi~~~g--~~~~ 230 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNG--VPIK 230 (419)
T ss_dssp CEEEEEECSSSEEEEEEETT--EEEE
T ss_pred CEEEEEECCCcEEEEEEECC--EEEE
Confidence 36789999999999999988 5654
No 167
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=28.04 E-value=92 Score=25.57 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=29.5
Q ss_pred HhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 260 NTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 260 ~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
+.|+++|+++|=..-.|.....+.. .+.|++++++.
T Consensus 110 ~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~v~vv~ 145 (198)
T 3mcw_A 110 ANGWLELVVAGVSTSNSVEATVRMA--GNLGFAVCLAE 145 (198)
T ss_dssp HHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEE
T ss_pred cCCCCeEEEEEcCcChHHHHHHHHH--HHCCCEEEEeC
Confidence 4589999999999999999987653 35799988775
No 168
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=27.86 E-value=94 Score=25.35 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=30.4
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++...
T Consensus 128 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 165 (199)
T 1j2r_A 128 RRRGIDTIVLCGISTNIGVESTARNA--WELGFNLVIAED 165 (199)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHCCCCEEEEEeeeccHHHHHHHHHH--HHCCCEEEEehh
Confidence 34589999999999999999887654 457999887753
No 169
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=27.72 E-value=95 Score=25.51 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=29.5
Q ss_pred HhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 260 NTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 260 ~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
+.|+++|+++|=..-.|.+...+.. .+.|++++++.
T Consensus 120 ~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~ 155 (197)
T 4h17_A 120 ELGHLDLIVCGFMSHSSVSTTVRRA--KDYGYRCTLVE 155 (197)
T ss_dssp HHTCSEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEE
T ss_pred hcCCCEEEEEeeCcCHHHHHHHHHH--HHCCCEEEEeC
Confidence 4589999999999999999887654 35799988775
No 170
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=27.61 E-value=1.2e+02 Score=24.08 Aligned_cols=37 Identities=14% Similarity=0.046 Sum_probs=29.9
Q ss_pred HhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 260 NTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 260 ~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
+.|+++|+++|=..-.|.+...+... +.|++++++..
T Consensus 98 ~~gi~~lvv~G~~T~~CV~~Ta~da~--~~Gy~v~v~~D 134 (167)
T 2a67_A 98 EQAVQTLEIAGVQTEFCVDTTIRMAH--GLGYTCLMTPK 134 (167)
T ss_dssp HTTCCEEEEEEECTTTHHHHHHHHHH--HHTCEEEECTT
T ss_pred HCCCCEEEEEecccChHHHHHHHHHH--HCCCEEEEech
Confidence 45899999999999999998876543 46999888864
No 171
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=27.52 E-value=93 Score=26.25 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=30.5
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++...
T Consensus 134 ~~~gi~~lii~G~~t~~CV~~Ta~da--~~~Gy~v~vv~D 171 (223)
T 3tg2_A 134 RETGRDQLIITGVYAHIGILSTALDA--FMFDIQPFVIGD 171 (223)
T ss_dssp HHHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhcCcCceEEeecccChHHHHHHHHH--HHCCCEEEEeCc
Confidence 35589999999999999999987654 357999887753
No 172
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=27.48 E-value=60 Score=29.02 Aligned_cols=28 Identities=7% Similarity=0.164 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...+++++|+++|++++|||.|++..
T Consensus 60 ~La~~Aa~~aL~~ag~~~~~Id~vi~~t 87 (323)
T 3il3_A 60 TMGFEAAKNAIEAAQINPQDIELIIVAT 87 (323)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3345789999999999999999988754
No 173
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=27.34 E-value=39 Score=30.42 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-CCCCC
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYT-RGPGL 85 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~-~gPG~ 85 (339)
...+.+++|+++|++++|||.|++. ..|.+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~ 96 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPH 96 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCC
Confidence 3478899999999999999988764 34543
No 174
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=27.21 E-value=66 Score=28.92 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC-CCCCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR-GPGLP 86 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~-gPG~~ 86 (339)
+-...+.+++|+++|++++|||.|.+.. .|.+.
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~ 103 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLINTSVSRDYL 103 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC
Confidence 3345788999999999999999998754 35544
No 175
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=27.12 E-value=99 Score=25.50 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=30.2
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|++++++..
T Consensus 122 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 159 (204)
T 3hu5_A 122 RRRGVDTLLVSGTQYPNCIRGTAVDA--FALDYDVVVVTD 159 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCeEEEeeeccchHHHHHHHHH--HHCCCEEEEehh
Confidence 35589999999999999999887643 357999887754
No 176
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=27.02 E-value=1e+02 Score=24.68 Aligned_cols=38 Identities=11% Similarity=0.278 Sum_probs=30.1
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++...
T Consensus 116 ~~~gi~~lvi~G~~t~~CV~~Ta~da--~~~Gy~v~vv~D 153 (180)
T 1im5_A 116 RGNGVKRVYICGVATEYCVRATALDA--LKHGFEVYLLRD 153 (180)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCEEEEEEeecCHHHHHHHHHH--HHCCCEEEEehh
Confidence 34589999999999999999886644 357999887753
No 177
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=26.82 E-value=99 Score=25.12 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=28.9
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
++.|+++|+++|=..-.|.....+.. .+.|++++++.
T Consensus 109 ~~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~v~vv~ 145 (190)
T 3lqy_A 109 DDAGIKKLVIVGAMTHMAIDAVTRAA--EDLGYECAVAH 145 (190)
T ss_dssp HHC-CCEEEEEEECTTTHHHHHHHHH--HHHTCEEEEEE
T ss_pred HhCCCCEEEEEecCcChHHHHHHHHH--HHCCCEEEEec
Confidence 34589999999999999999887654 34699988775
No 178
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=26.72 E-value=1e+02 Score=25.45 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=30.3
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++...
T Consensus 116 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 153 (204)
T 3hb7_A 116 KEEGIDTVVLTGVWTNVCVRSTATDA--LANAYKVITLSD 153 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHCCCCEEEEEeecccHHHHHHHHHH--HHCCCEEEEech
Confidence 34689999999999999999887643 457999887753
No 179
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=26.55 E-value=48 Score=30.51 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=21.7
Q ss_pred CeEEEEcchhhhHHHHHHHHHHHHh
Q psy9394 264 NKLVVVGGVGANKQLRKKLNILKKQ 288 (339)
Q Consensus 264 ~~v~laGGVa~N~~l~~~l~~~l~~ 288 (339)
.+|+|+||.++=..+.++|.+++..
T Consensus 299 ~nIvLtGG~s~~~G~~~rl~~el~~ 323 (394)
T 1k8k_B 299 KHIVLSGGSTMYPGLPSRLERELKQ 323 (394)
T ss_dssp TTCEEESGGGCSTTHHHHHHHHHHH
T ss_pred hCEEEeCcccccccHHHHHHHHHHH
Confidence 5799999999999888888888764
No 180
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=26.52 E-value=77 Score=28.09 Aligned_cols=41 Identities=5% Similarity=0.097 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSI 99 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~l 99 (339)
..+..+++++|+++|++++|||.|... + ++.++...+.+.+
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H--~---~~~~~~~~~~~~l 272 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPH--Q---ANSRINELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEC--C---SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC--C---CCHHHHHHHHHHc
Confidence 346678999999999999999999763 2 2345544444443
No 181
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=26.46 E-value=86 Score=28.43 Aligned_cols=28 Identities=4% Similarity=0.118 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
+-...+.+++|+++|++++|||.|++..
T Consensus 56 ~La~~Aa~~aL~~ag~~~~dId~vi~~t 83 (357)
T 3s3l_A 56 RMAARAARAALGRGDVDPADVSLVLHSS 83 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3345788999999999999999998764
No 182
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=26.45 E-value=77 Score=28.07 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRG 82 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~g 82 (339)
+-...+.+++|+++|++++|||.|.+...
T Consensus 63 ~la~~A~~~al~~ag~~~~~id~vi~~t~ 91 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIVTTN 91 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 44557889999999999999999987644
No 183
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=26.27 E-value=59 Score=28.64 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 55 TIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 55 ~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
.+..+++.+|+++|++++|||.|..-
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H 244 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPH 244 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 46678999999999999999999763
No 184
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=26.02 E-value=77 Score=29.07 Aligned_cols=27 Identities=22% Similarity=0.539 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEE
Q psy9394 53 IQTIIPLLSKLLKNSNLELKKIDIIAY 79 (339)
Q Consensus 53 ~~~l~~~i~~~l~~~~i~~~did~ia~ 79 (339)
.+.+...++.+|+++|++++|||.|+.
T Consensus 286 ~~~~~~~i~~aL~~agl~~~dId~~~~ 312 (393)
T 1ted_A 286 FSGVAPVVTEMLWDNGLQISDIDLWAI 312 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEE
Confidence 455778999999999999999999976
No 185
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=25.75 E-value=66 Score=28.23 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSI 99 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~l 99 (339)
+.+..+++.+|+++|++++|||.|... ++ +.++...+.+.+
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~~H-~~----~~~~~d~~~~~l 252 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFIPH-QA----NIRIMESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEC-CS----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc-CC----CHHHHHHHHHHh
Confidence 356678999999999999999998753 22 345544444433
No 186
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=25.63 E-value=69 Score=28.54 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=34.5
Q ss_pred CCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHHHHHHHHHHHHhcCC
Q psy9394 262 GINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAMIAFAGAMRIENNYK 321 (339)
Q Consensus 262 ~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~aiG~a~~~~~~~~~~ 321 (339)
.++.+++-=+ |..+.+.+.+.|.-..-+++..-..+-|=++.++-.++..+++.|..
T Consensus 239 did~~v~Hq~---~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~ 295 (321)
T 3il6_A 239 TVDYLLLHQA---NVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTL 295 (321)
T ss_dssp GCSEEEECCS---CHHHHHHHHHHHTCCGGGBCCCGGGTCBCGGGHHHHHHHHHHHTTSS
T ss_pred cCCEEEEcCC---CHHHHHHHHHHcCcCHHHhhhhHhhcccHHHHHHHHHHHHHHHhCCC
Confidence 5778877555 77778888877732111232221225566677777777777777753
No 187
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=25.31 E-value=34 Score=30.97 Aligned_cols=17 Identities=18% Similarity=0.493 Sum_probs=15.0
Q ss_pred CEEEEEecCCCceeEEE
Q psy9394 1 MIILGIESSCDDSGLAL 17 (339)
Q Consensus 1 M~iLgidts~~~~~~al 17 (339)
|+++|||.++..++++.
T Consensus 21 m~~igiDlG~~~tkv~~ 37 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIG 37 (346)
T ss_dssp CEEEEEEECSSEEEEEC
T ss_pred eEEEEEecCCcceeEEe
Confidence 78899999999998773
No 188
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=24.90 E-value=99 Score=28.30 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeCCCC
Q psy9394 57 IPLLSKLLKNSNLELKKIDIIAYTRGPG 84 (339)
Q Consensus 57 ~~~i~~~l~~~~i~~~did~ia~~~gPG 84 (339)
..+.+++|+++|++++|||.|++..-.+
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~ 113 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTD 113 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCC
Confidence 4688999999999999999998765433
No 189
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=24.78 E-value=1e+02 Score=32.09 Aligned_cols=67 Identities=12% Similarity=0.178 Sum_probs=39.9
Q ss_pred EEEEEecCCCceeEEEEECCCCc--eeEE--EEeeecccccccCCccchH----HHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9394 2 IILGIESSCDDSGLALYDTHIKN--LRSH--VICSQNLVHKEYGGVVPEL----AARTHIQTIIPLLSKLLKNSNLELKK 73 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~--i~~~--~~~~~~~~~~~~~G~~~~~----~~~~~~~~l~~~i~~~l~~~~i~~~d 73 (339)
.+|+||.+...+-+++++.+.++ ++.. ..+ + +|+. ...+.+..+...|..++++.+++..+
T Consensus 527 ~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~-~----------ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~ 595 (917)
T 1cza_N 527 DFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIY-A----------IPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPR 595 (917)
T ss_dssp EEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEE-C----------CCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred EEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEE-e----------cCcccccCCHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 57999999999999999752023 4421 111 1 1221 12445666667788888877765545
Q ss_pred cCEEEEe
Q psy9394 74 IDIIAYT 80 (339)
Q Consensus 74 id~ia~~ 80 (339)
+ .+.++
T Consensus 596 l-~lG~t 601 (917)
T 1cza_N 596 M-PLGFT 601 (917)
T ss_dssp C-EEEEE
T ss_pred e-eEEEE
Confidence 4 45544
No 190
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=24.74 E-value=1.1e+02 Score=25.83 Aligned_cols=38 Identities=13% Similarity=0.130 Sum_probs=30.3
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++...
T Consensus 135 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~D 172 (233)
T 3irv_A 135 RARDVDTIIVCGTVTNVCCETTIRDG--VHREYKVIALSD 172 (233)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCeEEEEeecccHHHHHHHHHH--HHCCCEEEEech
Confidence 35589999999999999999887654 357999887753
No 191
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=24.68 E-value=1.2e+02 Score=25.06 Aligned_cols=39 Identities=23% Similarity=0.280 Sum_probs=30.9
Q ss_pred HHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 258 LKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 258 ~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++..|+++|+++|=..-.|.....+.. .+.|++++++..
T Consensus 100 L~~~gi~~lvi~Gv~T~~CV~~Ta~dA--~~~Gy~V~vv~D 138 (208)
T 1yac_A 100 VKATGKKQLIIAGVVTEVCVAFPALSA--IEEGFDVFVVTD 138 (208)
T ss_dssp HHHTTCSEEEEEEBSCCCCCHHHHHHH--HHTTCEEEEETT
T ss_pred HHhcCCCEEEEEEeccchhHHHHHHHH--HHCCCEEEEECc
Confidence 345689999999999999998886654 357999888864
No 192
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=24.55 E-value=36 Score=31.22 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=18.8
Q ss_pred CEEEEEecCCCceeEEEEECC
Q psy9394 1 MIILGIESSCDDSGLALYDTH 21 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~ 21 (339)
|.++|||.++..+++|+.+++
T Consensus 23 ~~viGID~GTt~s~va~~~~g 43 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHG 43 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEcCCccEEEEEEECC
Confidence 578999999999999998866
No 193
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=24.32 E-value=1.2e+02 Score=24.86 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=30.2
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
+..|+++|+++|=..-.|.+...+.. .+.|+++++...
T Consensus 122 ~~~gi~~lvi~G~~t~~CV~~Ta~~a--~~~G~~v~v~~D 159 (199)
T 3txy_A 122 RRRGITDIVLTGIATNIGVESTAREA--YENNYNVVVVSD 159 (199)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HhCCCCEEEEEeeccCHHHHHHHHHH--HHCCCEEEEecH
Confidence 34589999999999999999887654 357999887753
No 194
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.17 E-value=99 Score=27.01 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRG 82 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~g 82 (339)
+-...+.+++|+++|++++|||.|.+...
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~~~~ 81 (313)
T 1zow_A 53 DLAYEASVKAIADAGIQPEDIDMIIVATA 81 (313)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 44557889999999999999999877543
No 195
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=23.83 E-value=1.1e+02 Score=25.51 Aligned_cols=37 Identities=16% Similarity=0.106 Sum_probs=29.8
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++..
T Consensus 105 ~~~gi~~lvi~G~~T~~CV~~Ta~dA--~~~Gy~V~vv~ 141 (211)
T 3oqp_A 105 AARQIDTLTVTGYMTHNCDASTINHA--VHSGLAVEFLH 141 (211)
T ss_dssp HTTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEE
T ss_pred HhCCCCEEEEEeeccCHHHHHHHHHH--HHCCCeEEEec
Confidence 35589999999999999999886654 35799988775
No 196
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=23.73 E-value=93 Score=27.11 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRG 82 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~g 82 (339)
+-...+.+++|+++|++++|||.|.+...
T Consensus 52 ~l~~~a~~~al~~ag~~~~~id~v~~~~~ 80 (309)
T 2ebd_A 52 YMATQAAKEALREANLSPEELDLIILATL 80 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 34457889999999999999999887643
No 197
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=23.03 E-value=54 Score=29.84 Aligned_cols=26 Identities=8% Similarity=0.213 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEE
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAY 79 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~ 79 (339)
+.+++.++++|+++|++++|||.+++
T Consensus 238 ~~~~~~i~~~L~~~gl~~~did~~v~ 263 (357)
T 3s3l_A 238 DLLVAAKTQALEDAGTAIEDIAHAVI 263 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 35678999999999999999999985
No 198
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=23.02 E-value=1.3e+02 Score=25.37 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=30.0
Q ss_pred HhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 260 NTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 260 ~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
..|+++|+++|=..-.|.+...+.. .+.|+++++...
T Consensus 148 ~~gi~~lii~G~~T~~CV~~Ta~da--~~~Gy~v~vv~D 184 (226)
T 3kl2_A 148 SKGVDTIVLGGFLTNCCVESTMRTG--YERGFRVITLTD 184 (226)
T ss_dssp HHTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred CCCCCcEEEeccCcchHHHHHHHHH--HHCCCEEEEech
Confidence 4589999999999999999887654 357999887753
No 199
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=22.99 E-value=61 Score=28.60 Aligned_cols=27 Identities=7% Similarity=0.132 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+.+..+++.+|+++|++++|||.|...
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 456678999999999999999999763
No 200
>3a9l_A Poly-gamma-glutamate hydrolase; zinc ION binding, open alpha/beta mixed core structure; 1.90A {Bacillus phage PHINIT1}
Probab=22.91 E-value=63 Score=27.40 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=27.3
Q ss_pred eEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCCCCCC
Q psy9394 265 KLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKKEFCT 302 (339)
Q Consensus 265 ~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~ 302 (339)
+.++.||- |..+.+.|.+.|...||++-..|...+|
T Consensus 111 ~~v~vGG~--d~~l~~~I~~~L~~~Gf~v~~~~~~l~G 146 (216)
T 3a9l_A 111 KNTLVGGL--NTELRNLIVSKLNSKGIAAEVATDRFTA 146 (216)
T ss_dssp CCEEEESS--CHHHHHHHHHHHHHTTCCCEECCSSCCC
T ss_pred cEEEECCC--CHHHHHHHHHHHHhCCeeeeeCCCCCCC
Confidence 56777875 8899999999999999976544433333
No 201
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=22.77 E-value=50 Score=28.95 Aligned_cols=26 Identities=4% Similarity=0.255 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 55 TIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 55 ~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
.+..+++.+|+++|++++|||.|...
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 45678999999999999999998763
No 202
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=22.75 E-value=1.2e+02 Score=26.41 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=30.2
Q ss_pred HHHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 258 LKNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 258 ~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
+++.|+++|+++|=..-.|.+...+.. .+.|+++++...
T Consensus 140 L~~~gi~~lvi~Gv~T~~CV~~Ta~dA--~~~Gy~V~vv~D 178 (287)
T 2fq1_A 140 LKESGRNQLIITGVYAHIGCMTTATDA--FMRDIKPFMVAD 178 (287)
T ss_dssp HHHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEEE
T ss_pred HHHCCCCEEEEEEeCcchHHHHHHHHH--HHCCCEEEEech
Confidence 345689999999999999999876644 357999887753
No 203
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.43 E-value=1.5e+02 Score=26.80 Aligned_cols=23 Identities=17% Similarity=0.387 Sum_probs=17.0
Q ss_pred EEEEEecCCCceeEEEEECCCCce
Q psy9394 2 IILGIESSCDDSGLALYDTHIKNL 25 (339)
Q Consensus 2 ~iLgidts~~~~~~al~~~~~~~i 25 (339)
+|+|+|.+.-.+++++.+++ |.+
T Consensus 1 ~iiG~DIGGAn~K~a~~~~~-g~~ 23 (334)
T 3cet_A 1 MILGIDIGGANTKITELHEN-GEF 23 (334)
T ss_dssp CEEEEEEC--CEEEEEECST-TCC
T ss_pred CeeEEEecccceeeeeecCC-Cce
Confidence 46899999999999998755 554
No 204
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=22.40 E-value=2e+02 Score=22.79 Aligned_cols=48 Identities=10% Similarity=0.060 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeec
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGIN 111 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~ 111 (339)
+.+...++.+|++.|+. |+.|+.-.-----.+ ...++..+++|+..++
T Consensus 24 ~~i~~ai~~aL~~~gl~---v~~lATid~K~dE~g-------L~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 24 DAIIAAVRAAERAFGVT---VDYLATAPLKADEAG-------LAEAAKGLSLSLEIVA 71 (155)
T ss_dssp HHHHHHHHHHHHHHTCC---CCEEEESSCCSCCHH-------HHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEchhhhCCCHH-------HHHHHHHhCCCeEEEC
Confidence 55778899999999995 888875321111112 3567888999998875
No 205
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=22.17 E-value=44 Score=33.47 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=18.7
Q ss_pred CEEEEEecCCCceeEEEEECC
Q psy9394 1 MIILGIESSCDDSGLALYDTH 21 (339)
Q Consensus 1 M~iLgidts~~~~~~al~~~~ 21 (339)
|.++|||.++..+++|+++++
T Consensus 2 m~~iGIDlGTtns~va~~~~g 22 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNR 22 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETT
T ss_pred CcEEEEEcCCCcEEEEEEECC
Confidence 568999999999999998866
No 206
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=21.96 E-value=1.2e+02 Score=28.82 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=23.2
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeCCCC
Q psy9394 57 IPLLSKLLKNSNLELKKIDIIAYTRGPG 84 (339)
Q Consensus 57 ~~~i~~~l~~~~i~~~did~ia~~~gPG 84 (339)
..+.+++|+++|++++|||.|++..-.+
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~ 142 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTD 142 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCC
Confidence 4688999999999999999998765433
No 207
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=21.70 E-value=88 Score=28.54 Aligned_cols=26 Identities=12% Similarity=0.118 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
+.+. .++.+|+++|++++|||.|...
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H 278 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVH 278 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEE
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEEC
Confidence 4566 8999999999999999999863
No 208
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=21.59 E-value=47 Score=30.34 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=22.3
Q ss_pred hCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 261 TGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 261 ~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
.+.+-|+|+||.++|..++. |.+. ...+..+++.
T Consensus 9 ~~~kIVvigGGtGl~~ll~g-Lk~~--~~~iTaIVtv 42 (341)
T 2p0y_A 9 QRPKIVVIGGGTGLPVVLNG-LRKQ--AVDITAVVTV 42 (341)
T ss_dssp -CCEEEEECCGGGHHHHHHH-HHHS--SSEEEEECC-
T ss_pred CCCeEEEECCcccHHHHHHH-HHhC--CCCeEEEEEC
Confidence 35678899999999999976 4332 1234556664
No 209
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=21.44 E-value=68 Score=29.72 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYT 80 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~ 80 (339)
...+++++|+++|++++|||+|-..
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~H 305 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFAD 305 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEe
Confidence 4568999999999999999999653
No 210
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=21.38 E-value=1.2e+02 Score=29.42 Aligned_cols=73 Identities=18% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHHHHHHH-----HHHHHHHHHHhCCCeEEEEcchhhhHHHHHHHHHHHHhC----------CcEEEccCCCCCChhH
Q psy9394 241 GFLDAIIDVL-----TFKCIAALKNTGINKLVVVGGVGANKQLRKKLNILKKQY----------NYTVFYPKKEFCTDNG 305 (339)
Q Consensus 241 ~~q~~l~~~l-----~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~----------~~~v~~~~~~~~~D~G 305 (339)
++++.+.+.| .++=+.+. .+|+|+||.++=..+.++|.++|... .++|+-||...----.
T Consensus 479 gL~~aI~~SI~~~~~~D~r~~L~-----~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~ 553 (593)
T 4fo0_A 479 GLDKAILHSIDCCSSDDTKKKMY-----SSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLI 553 (593)
T ss_dssp CHHHHHHHHHHTCSSHHHHHHHH-----HEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTH
T ss_pred CHHHHHHHHHHhCCcHHHHHHHh-----CCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCcee
Q ss_pred HHHHHHHHHHHHh
Q psy9394 306 AMIAFAGAMRIEN 318 (339)
Q Consensus 306 ~aiG~a~~~~~~~ 318 (339)
+=+|...+..+..
T Consensus 554 aW~GgSilasL~~ 566 (593)
T 4fo0_A 554 AWKGGAVLACLDT 566 (593)
T ss_dssp HHHHHHHHHHCGG
T ss_pred eehhhHHHhcCcc
No 211
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=21.25 E-value=1.5e+02 Score=23.91 Aligned_cols=37 Identities=11% Similarity=0.078 Sum_probs=29.7
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPK 297 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~ 297 (339)
++.|+++|+++|=..-.|.....+.. .+.|+++++..
T Consensus 121 ~~~gi~~lvv~G~~t~~CV~~Ta~da--~~~G~~v~v~~ 157 (186)
T 3gbc_A 121 RQRGVDEVDVVGIATDHCVRQTAEDA--VRNGLATRVLV 157 (186)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHH--HHTTCEEEEEE
T ss_pred HhcCCCEEEEEEecccHHHHHHHHHH--HHCCCeEEEEh
Confidence 34589999999999999999887654 35799988775
No 212
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=21.04 E-value=1.3e+02 Score=27.70 Aligned_cols=26 Identities=12% Similarity=0.079 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeC
Q psy9394 56 IIPLLSKLLKNSNLELKKIDIIAYTR 81 (339)
Q Consensus 56 l~~~i~~~l~~~~i~~~did~ia~~~ 81 (339)
...+.+++|+++|++++|||.|++..
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~vi~~t 131 (393)
T 3ov2_A 106 AKEAAEKAIKEWGRPKSEITHLVFCS 131 (393)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34688999999999999999988753
No 213
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=20.87 E-value=2e+02 Score=24.82 Aligned_cols=37 Identities=8% Similarity=-0.092 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcchhhhHHHHHHH
Q psy9394 246 IIDVLTFKCIAALKNTGINKLVVVGGVGANKQLRKKL 282 (339)
Q Consensus 246 l~~~l~~~~~~~~~~~~~~~v~laGGVa~N~~l~~~l 282 (339)
+++.+++.++...++.+.-.|+|+||-.-........
T Consensus 20 ~A~~i~~~i~~~i~~~~~~~l~LsgGstP~~ly~~L~ 56 (266)
T 3eb9_A 20 GCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLH 56 (266)
T ss_dssp HHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHH
Confidence 3445555555555566667999999976666555433
No 214
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.82 E-value=98 Score=27.22 Aligned_cols=29 Identities=14% Similarity=0.221 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRG 82 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~g 82 (339)
+-...+.+++|+++|+++++||.|.+...
T Consensus 52 ~la~~a~~~al~~ag~~~~~id~vi~~~~ 80 (322)
T 1ub7_A 52 DLAFKAVEDLLRRHPGALEGVDAVIVATN 80 (322)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 44557889999999999999998876543
No 215
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=20.75 E-value=1.8e+02 Score=25.77 Aligned_cols=53 Identities=23% Similarity=0.148 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCCEEeecchhH
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKPVIGINHLEG 115 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p~~~v~h~~a 115 (339)
+.+...++.+-. + ++|.|.||.|+|..|.-|. +.++..+....+++. +.|+.|
T Consensus 39 ~~l~~~~~~l~~---l---~p~fvsVT~gagg~~r~~t-~~~a~~i~~~~g~~~--v~Hltc 91 (304)
T 3fst_A 39 QTLWNSIDRLSS---L---KPKFVSVTYGANSGERDRT-HSIIKGIKDRTGLEA--APHLTC 91 (304)
T ss_dssp HHHHHHHHHHHT---T---CCSEEEECCCTTSSCHHHH-HHHHHHHHHHHCCCE--EEEEES
T ss_pred HHHHHHHHHHhc---C---CCCEEEEeeCCCCcchhHH-HHHHHHHHHHhCCCe--eEEeec
Confidence 445556666543 3 7899999999998765442 234555666677774 557766
No 216
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=20.75 E-value=2.8e+02 Score=21.11 Aligned_cols=44 Identities=14% Similarity=0.038 Sum_probs=23.5
Q ss_pred HhCCCeEEEE--cchhhhHHHHHHHHHHHHhCCcEEEccCCCCCChhHHH
Q psy9394 260 NTGINKLVVV--GGVGANKQLRKKLNILKKQYNYTVFYPKKEFCTDNGAM 307 (339)
Q Consensus 260 ~~~~~~v~la--GGVa~N~~l~~~l~~~l~~~~~~v~~~~~~~~~D~G~a 307 (339)
.+|...++.+ |..+.|..+...+.+ .|+.....++.-+.+||.+
T Consensus 64 ~~g~p~~i~sDnG~~f~s~~~~~~~~~----~gi~~~~~~p~~p~~ng~~ 109 (162)
T 1cxq_A 64 VLGRPKAIKTDNGSCFTSKSTREWLAR----WGIAHTTGIPGNSQGQAMV 109 (162)
T ss_dssp HHCCCSEEECCSCHHHHSHHHHHHHHH----HTCEEECCCCC----CHHH
T ss_pred HHCCCeEEEeCCchhhhhHHHHHHHHH----CCCeEeeCCCCCCccCCEE
Confidence 3455444433 557777776655443 3787666655567888875
No 217
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=20.68 E-value=1e+02 Score=28.15 Aligned_cols=48 Identities=10% Similarity=0.191 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeCCCCCCchhHHHHHHHHHHHHhcCCC
Q psy9394 53 IQTIIPLLSKLLKNSNLELKKIDIIAYTRGPGLPGSLLVGSSIACSIALSINKP 106 (339)
Q Consensus 53 ~~~l~~~i~~~l~~~~i~~~did~ia~~~gPG~~t~lr~g~~~ak~la~~~~~p 106 (339)
.+.+...++++|+++++++.+++.|..+.|-....+++ +.+...++.+
T Consensus 324 ~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~------~~l~~~f~~~ 371 (409)
T 4gni_A 324 FEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIA------ANFRYIFPES 371 (409)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHH------HHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHH------HHHHHHcCCc
Confidence 34566788899999999999999999887655443432 4445555554
No 218
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=20.63 E-value=1.6e+02 Score=25.02 Aligned_cols=38 Identities=11% Similarity=0.188 Sum_probs=29.9
Q ss_pred HHhCCCeEEEEcchhhhHHHHHHHHHHHHhCCcEEEccCC
Q psy9394 259 KNTGINKLVVVGGVGANKQLRKKLNILKKQYNYTVFYPKK 298 (339)
Q Consensus 259 ~~~~~~~v~laGGVa~N~~l~~~l~~~l~~~~~~v~~~~~ 298 (339)
++.|+++|+++|=..-.|.....+.. .+.|++++++..
T Consensus 155 ~~~gi~~lvi~G~~T~~CV~~Ta~da--~~~Gy~V~vv~D 192 (236)
T 3ot4_A 155 AQRGVQTLLVAGATTSGCVRASVVDA--MSAGFRPLVLSD 192 (236)
T ss_dssp HHTTCCEEEEEESCTTTHHHHHHHHH--HHHTCEEEEEEE
T ss_pred HHCCCCEEEEeCccCcHHHHHHHHHH--HHCCCEEEEech
Confidence 35589999999999999999887654 346999887753
No 219
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=20.54 E-value=1.3e+02 Score=26.23 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeCC-CCC
Q psy9394 54 QTIIPLLSKLLKNSNLELKKIDIIAYTRG-PGL 85 (339)
Q Consensus 54 ~~l~~~i~~~l~~~~i~~~did~ia~~~g-PG~ 85 (339)
+-...+..++|+++|+++++||.|.+... |.+
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~ 85 (317)
T 1hnj_A 53 TMGFEAATRAIEMAGIEKDQIGLIVVATTSATH 85 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC
Confidence 44557889999999999999999776543 443
Done!