Query psy9395
Match_columns 637
No_of_seqs 455 out of 3874
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 18:02:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ces_A MNMG, tRNA uridine 5-ca 100.0 2E-147 6E-152 1240.5 38.6 617 4-628 26-643 (651)
2 2zxi_A TRNA uridine 5-carboxym 100.0 2E-146 6E-151 1227.6 45.4 602 6-628 27-635 (637)
3 3cp8_A TRNA uridine 5-carboxym 100.0 3E-144 1E-148 1214.0 41.0 615 5-628 20-641 (641)
4 3g5s_A Methylenetetrahydrofola 100.0 7.7E-76 2.6E-80 614.2 25.4 359 7-461 2-402 (443)
5 3v76_A Flavoprotein; structura 100.0 9.2E-32 3.1E-36 292.1 18.1 341 5-392 26-417 (417)
6 2gqf_A Hypothetical protein HI 100.0 2.7E-29 9.1E-34 271.7 21.5 343 6-394 4-400 (401)
7 2i0z_A NAD(FAD)-utilizing dehy 99.9 1E-25 3.4E-30 247.2 20.5 353 6-397 26-444 (447)
8 2cul_A Glucose-inhibited divis 99.8 2.6E-19 9E-24 178.7 16.3 180 6-220 3-188 (232)
9 3nlc_A Uncharacterized protein 99.8 7.7E-19 2.6E-23 195.9 18.7 353 7-397 108-543 (549)
10 1y0p_A Fumarate reductase flav 99.7 1.6E-16 5.5E-21 179.3 20.4 152 6-160 126-318 (571)
11 1qo8_A Flavocytochrome C3 fuma 99.7 1.2E-15 4.1E-20 172.0 21.0 154 5-161 120-314 (566)
12 2bs2_A Quinol-fumarate reducta 99.7 1.4E-15 4.9E-20 173.5 21.3 185 1-195 1-249 (660)
13 4a5l_A Thioredoxin reductase; 99.7 1.2E-15 3.9E-20 158.2 16.5 122 3-160 1-122 (314)
14 4at0_A 3-ketosteroid-delta4-5a 99.6 5E-15 1.7E-19 164.9 20.2 154 4-160 39-265 (510)
15 4fk1_A Putative thioredoxin re 99.6 6.8E-15 2.3E-19 152.4 19.9 111 6-158 6-116 (304)
16 1chu_A Protein (L-aspartate ox 99.6 2.4E-15 8.2E-20 168.4 17.4 180 5-195 7-236 (540)
17 1d4d_A Flavocytochrome C fumar 99.6 4.1E-15 1.4E-19 167.8 18.4 153 6-161 126-319 (572)
18 4gcm_A TRXR, thioredoxin reduc 99.6 1.4E-14 4.8E-19 150.3 20.1 44 353-397 261-306 (312)
19 2wdq_A Succinate dehydrogenase 99.6 4E-15 1.4E-19 168.2 17.2 186 1-195 1-234 (588)
20 2h88_A Succinate dehydrogenase 99.6 8.1E-15 2.8E-19 166.2 18.9 179 6-195 18-245 (621)
21 1kf6_A Fumarate reductase flav 99.6 9.4E-15 3.2E-19 165.5 18.3 154 5-160 4-198 (602)
22 3gyx_A Adenylylsulfate reducta 99.5 2.2E-14 7.4E-19 163.7 14.6 152 6-160 22-234 (662)
23 1jnr_A Adenylylsulfate reducta 99.5 5.7E-13 1.9E-17 152.2 22.5 152 6-160 22-219 (643)
24 3fbs_A Oxidoreductase; structu 99.5 8.2E-13 2.8E-17 135.2 20.8 109 7-158 3-111 (297)
25 3f8d_A Thioredoxin reductase ( 99.5 6.9E-13 2.4E-17 137.3 19.3 111 6-159 15-125 (323)
26 2e5v_A L-aspartate oxidase; ar 99.5 3.5E-13 1.2E-17 148.4 16.2 146 8-160 1-177 (472)
27 2q7v_A Thioredoxin reductase; 99.4 1.6E-12 5.6E-17 135.4 18.1 115 5-159 7-123 (325)
28 3lzw_A Ferredoxin--NADP reduct 99.4 1.1E-12 3.9E-17 136.3 15.7 115 5-157 6-121 (332)
29 3cty_A Thioredoxin reductase; 99.4 1.2E-11 4.1E-16 128.4 23.3 113 4-159 14-126 (319)
30 2q0l_A TRXR, thioredoxin reduc 99.4 5.2E-12 1.8E-16 130.5 19.6 114 6-160 1-115 (311)
31 3dje_A Fructosyl amine: oxygen 99.4 2.5E-12 8.7E-17 139.8 17.5 159 1-160 1-222 (438)
32 4a9w_A Monooxygenase; baeyer-v 99.4 6.9E-12 2.4E-16 131.5 19.0 129 6-159 3-132 (357)
33 3itj_A Thioredoxin reductase 1 99.4 4.9E-12 1.7E-16 131.8 17.5 119 5-159 21-142 (338)
34 3dme_A Conserved exported prot 99.3 5.6E-12 1.9E-16 133.0 14.3 151 6-158 4-208 (369)
35 3r9u_A Thioredoxin reductase; 99.3 1.6E-11 5.4E-16 126.6 17.1 111 5-158 3-117 (315)
36 2ywl_A Thioredoxin reductase r 99.3 3.8E-11 1.3E-15 114.0 17.9 108 6-158 1-109 (180)
37 1vdc_A NTR, NADPH dependent th 99.3 1.1E-11 3.8E-16 129.3 15.3 118 6-160 8-125 (333)
38 3l8k_A Dihydrolipoyl dehydroge 99.3 6.5E-12 2.2E-16 138.0 13.8 136 6-158 4-143 (466)
39 1y56_B Sarcosine oxidase; dehy 99.3 1.4E-11 4.7E-16 131.2 15.2 152 3-158 2-204 (382)
40 4dgk_A Phytoene dehydrogenase; 99.3 1.8E-10 6.1E-15 127.3 22.5 55 103-158 222-277 (501)
41 4b1b_A TRXR, thioredoxin reduc 99.3 5.5E-11 1.9E-15 132.6 18.2 182 6-197 42-252 (542)
42 3cgv_A Geranylgeranyl reductas 99.3 8.8E-12 3E-16 133.1 10.0 148 6-158 4-161 (397)
43 3lad_A Dihydrolipoamide dehydr 99.3 2.6E-11 9E-16 133.5 13.6 144 5-159 2-154 (476)
44 3oz2_A Digeranylgeranylglycero 99.3 1.2E-11 4E-16 131.5 10.4 148 6-158 4-161 (397)
45 1fl2_A Alkyl hydroperoxide red 99.3 1.3E-10 4.6E-15 119.8 18.0 112 6-159 1-115 (310)
46 2x3n_A Probable FAD-dependent 99.2 1.7E-11 5.7E-16 131.6 11.2 148 4-158 4-165 (399)
47 3qfa_A Thioredoxin reductase 1 99.2 3.1E-11 1E-15 134.5 13.6 37 2-38 28-64 (519)
48 1ojt_A Surface protein; redox- 99.2 5.1E-11 1.7E-15 131.5 14.6 147 3-160 3-161 (482)
49 2gag_B Heterotetrameric sarcos 99.2 1.2E-10 4E-15 124.8 16.9 149 6-158 21-229 (405)
50 3nyc_A D-arginine dehydrogenas 99.2 4.3E-11 1.5E-15 127.0 13.2 149 5-158 8-208 (381)
51 1ryi_A Glycine oxidase; flavop 99.2 6E-11 2E-15 126.2 14.2 150 4-158 15-218 (382)
52 2oln_A NIKD protein; flavoprot 99.2 1.2E-10 4.2E-15 124.7 16.3 150 5-158 3-207 (397)
53 3dk9_A Grase, GR, glutathione 99.2 4.7E-11 1.6E-15 131.6 13.2 34 5-38 19-52 (478)
54 3o0h_A Glutathione reductase; 99.2 1.4E-10 4.8E-15 128.0 16.9 142 5-160 25-167 (484)
55 3dgz_A Thioredoxin reductase 2 99.2 7.9E-11 2.7E-15 130.2 14.5 34 5-38 5-38 (488)
56 3urh_A Dihydrolipoyl dehydroge 99.2 9.3E-11 3.2E-15 129.6 14.7 144 6-159 25-170 (491)
57 3e1t_A Halogenase; flavoprotei 99.2 7.8E-11 2.7E-15 131.0 13.9 149 1-158 1-171 (512)
58 3atr_A Conserved archaeal prot 99.2 1.9E-11 6.6E-16 133.7 8.7 145 5-158 5-161 (453)
59 2uzz_A N-methyl-L-tryptophan o 99.2 1.8E-10 6.3E-15 121.9 15.0 150 7-159 3-204 (372)
60 3nix_A Flavoprotein/dehydrogen 99.2 3.5E-10 1.2E-14 122.0 17.2 144 6-158 5-165 (421)
61 1hyu_A AHPF, alkyl hydroperoxi 99.2 4.7E-10 1.6E-14 124.9 18.7 113 5-159 211-326 (521)
62 1rp0_A ARA6, thiazole biosynth 99.2 2.4E-10 8.3E-15 117.1 15.0 136 6-158 39-190 (284)
63 3ps9_A TRNA 5-methylaminomethy 99.2 3.4E-10 1.2E-14 130.1 17.2 60 98-159 413-473 (676)
64 3rp8_A Flavoprotein monooxygen 99.2 5.9E-11 2E-15 127.7 9.8 143 5-158 22-180 (407)
65 3sx6_A Sulfide-quinone reducta 99.2 1.2E-10 4.1E-15 126.8 12.3 107 6-160 4-113 (437)
66 3i3l_A Alkylhalidase CMLS; fla 99.1 4.2E-10 1.4E-14 127.0 16.7 144 6-158 23-187 (591)
67 3jsk_A Cypbp37 protein; octame 99.1 3.6E-10 1.2E-14 118.2 14.5 136 6-158 79-250 (344)
68 4dna_A Probable glutathione re 99.1 1.4E-10 4.6E-15 127.4 11.9 141 6-160 5-146 (463)
69 3pvc_A TRNA 5-methylaminomethy 99.1 3.2E-10 1.1E-14 130.7 14.9 61 98-160 408-470 (689)
70 3da1_A Glycerol-3-phosphate de 99.1 3.4E-10 1.2E-14 127.2 14.5 60 98-158 166-231 (561)
71 1zk7_A HGII, reductase, mercur 99.1 4.3E-10 1.5E-14 123.4 15.0 34 5-38 3-36 (467)
72 2gf3_A MSOX, monomeric sarcosi 99.1 6.6E-10 2.3E-14 118.3 15.7 149 6-158 3-204 (389)
73 3ic9_A Dihydrolipoamide dehydr 99.1 2.6E-10 8.8E-15 126.2 12.9 33 6-38 8-40 (492)
74 3dgh_A TRXR-1, thioredoxin red 99.1 7.7E-10 2.6E-14 122.0 16.7 34 5-38 8-41 (483)
75 1pj5_A N,N-dimethylglycine oxi 99.1 5.2E-10 1.8E-14 131.6 15.9 151 5-158 3-206 (830)
76 2gjc_A Thiazole biosynthetic e 99.1 3.3E-10 1.1E-14 117.7 12.1 136 6-158 65-238 (326)
77 2xdo_A TETX2 protein; tetracyc 99.1 1.1E-09 3.7E-14 117.5 15.2 151 1-159 21-182 (398)
78 2gmh_A Electron transfer flavo 99.1 1.5E-10 5.2E-15 130.7 8.5 143 6-158 35-216 (584)
79 3axb_A Putative oxidoreductase 99.1 6.8E-10 2.3E-14 121.0 13.2 59 98-158 177-253 (448)
80 1xdi_A RV3303C-LPDA; reductase 99.1 5.8E-10 2E-14 123.6 12.7 33 7-39 3-38 (499)
81 3fmw_A Oxygenase; mithramycin, 99.0 8.7E-10 3E-14 124.0 13.2 144 6-158 49-206 (570)
82 3ihg_A RDME; flavoenzyme, anth 99.0 1.4E-09 4.9E-14 121.4 14.1 148 1-158 1-182 (535)
83 2aqj_A Tryptophan halogenase, 99.0 2.3E-09 8E-14 119.8 15.8 60 98-158 161-221 (538)
84 2e4g_A Tryptophan halogenase; 99.0 2.2E-09 7.4E-14 120.4 15.4 60 98-158 190-251 (550)
85 3alj_A 2-methyl-3-hydroxypyrid 99.0 1.9E-09 6.4E-14 114.9 13.9 139 6-158 11-159 (379)
86 2qa1_A PGAE, polyketide oxygen 99.0 2.6E-09 9E-14 118.3 15.4 147 4-158 9-164 (500)
87 2pyx_A Tryptophan halogenase; 99.0 3.3E-09 1.1E-13 118.3 15.9 61 98-158 171-232 (526)
88 3c96_A Flavin-containing monoo 99.0 2.6E-09 8.9E-14 115.0 14.6 142 6-158 4-168 (410)
89 2gv8_A Monooxygenase; FMO, FAD 99.0 2E-09 6.9E-14 117.4 13.9 145 1-159 1-177 (447)
90 2vou_A 2,6-dihydroxypyridine h 99.0 7.1E-10 2.4E-14 119.0 9.8 144 1-158 1-152 (397)
91 3vrd_B FCCB subunit, flavocyto 99.0 1.4E-09 4.7E-14 116.7 12.1 50 354-403 276-330 (401)
92 1k0i_A P-hydroxybenzoate hydro 99.0 5.1E-10 1.7E-14 119.7 8.5 147 7-159 3-163 (394)
93 2weu_A Tryptophan 5-halogenase 99.0 3.1E-09 1E-13 117.9 15.0 61 97-158 168-229 (511)
94 2qcu_A Aerobic glycerol-3-phos 99.0 1.7E-09 5.8E-14 119.8 12.9 59 98-158 145-209 (501)
95 2rgh_A Alpha-glycerophosphate 99.0 2.9E-09 1E-13 119.8 14.5 60 98-158 184-249 (571)
96 2r0c_A REBC; flavin adenine di 99.0 4.3E-09 1.5E-13 118.0 15.3 143 5-158 25-195 (549)
97 3klj_A NAD(FAD)-dependent dehy 99.0 5.8E-09 2E-13 111.6 15.5 106 6-158 9-115 (385)
98 3c4n_A Uncharacterized protein 99.0 1.3E-09 4.6E-14 117.3 10.4 58 98-158 168-235 (405)
99 2qa2_A CABE, polyketide oxygen 99.0 1.4E-09 4.7E-14 120.5 10.3 144 5-158 11-165 (499)
100 2zbw_A Thioredoxin reductase; 98.9 3.8E-09 1.3E-13 110.0 12.8 119 1-158 1-120 (335)
101 3ab1_A Ferredoxin--NADP reduct 98.9 3.4E-09 1.2E-13 111.8 12.1 117 5-158 13-130 (360)
102 3h8l_A NADH oxidase; membrane 98.9 1.7E-09 5.8E-14 116.5 8.1 49 353-401 289-340 (409)
103 3ka7_A Oxidoreductase; structu 98.9 4.5E-09 1.5E-13 113.4 11.2 54 103-158 197-251 (425)
104 2bry_A NEDD9 interacting prote 98.9 5.3E-09 1.8E-13 115.7 11.6 132 5-159 91-230 (497)
105 2dkh_A 3-hydroxybenzoate hydro 98.9 5.2E-09 1.8E-13 119.4 11.8 147 5-158 31-210 (639)
106 4eqs_A Coenzyme A disulfide re 98.9 6.7E-09 2.3E-13 113.0 12.1 32 8-39 2-35 (437)
107 2a87_A TRXR, TR, thioredoxin r 98.9 7.7E-09 2.6E-13 108.0 12.1 112 5-158 13-125 (335)
108 3d1c_A Flavin-containing putat 98.9 8E-09 2.7E-13 109.0 11.4 136 6-159 4-143 (369)
109 1yvv_A Amine oxidase, flavin-c 98.8 8E-09 2.8E-13 107.5 11.0 143 7-158 3-161 (336)
110 1trb_A Thioredoxin reductase; 98.8 1.1E-08 3.8E-13 105.6 11.2 111 6-158 5-115 (320)
111 1c0p_A D-amino acid oxidase; a 98.8 8.2E-09 2.8E-13 109.1 10.0 37 3-39 3-39 (363)
112 3gwf_A Cyclohexanone monooxyge 98.8 2.2E-08 7.5E-13 111.8 13.1 132 6-158 8-146 (540)
113 3uox_A Otemo; baeyer-villiger 98.8 2.7E-08 9.1E-13 111.3 13.8 133 5-158 8-146 (545)
114 2vdc_G Glutamate synthase [NAD 98.8 1.1E-08 3.8E-13 111.8 10.3 43 357-400 404-447 (456)
115 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 7.2E-09 2.5E-13 108.6 8.4 141 7-158 2-164 (342)
116 4ap3_A Steroid monooxygenase; 98.8 2.1E-08 7.3E-13 112.2 11.7 133 5-158 20-158 (549)
117 1w4x_A Phenylacetone monooxyge 98.8 4.5E-08 1.5E-12 109.5 14.2 135 5-159 15-154 (542)
118 3s5w_A L-ornithine 5-monooxyge 98.7 8.7E-08 3E-12 104.7 15.6 144 5-158 29-191 (463)
119 3nrn_A Uncharacterized protein 98.7 3.9E-08 1.3E-12 106.1 11.8 52 103-158 190-242 (421)
120 4hb9_A Similarities with proba 98.7 5.6E-08 1.9E-12 103.7 12.2 143 8-158 3-165 (412)
121 1v59_A Dihydrolipoamide dehydr 98.7 1.9E-08 6.6E-13 110.5 8.4 36 4-39 3-38 (478)
122 2xve_A Flavin-containing monoo 98.7 5E-08 1.7E-12 106.9 11.0 139 7-158 3-165 (464)
123 3k7m_X 6-hydroxy-L-nicotine ox 98.7 4.3E-08 1.5E-12 105.9 9.8 38 6-43 1-38 (431)
124 3g3e_A D-amino-acid oxidase; F 98.7 9E-09 3.1E-13 108.2 4.0 50 97-159 137-186 (351)
125 1gte_A Dihydropyrimidine dehyd 98.7 4.2E-08 1.4E-12 117.6 10.0 33 6-38 187-220 (1025)
126 3lxd_A FAD-dependent pyridine 98.6 6.5E-07 2.2E-11 96.4 17.7 56 102-158 194-250 (415)
127 1ebd_A E3BD, dihydrolipoamide 98.6 8.6E-08 2.9E-12 104.7 10.9 142 6-159 3-145 (455)
128 2r9z_A Glutathione amide reduc 98.6 8E-08 2.7E-12 105.3 10.5 34 5-38 3-36 (463)
129 2hqm_A GR, grase, glutathione 98.6 8.6E-08 2.9E-12 105.5 10.3 34 5-38 10-43 (479)
130 3qvp_A Glucose oxidase; oxidor 98.6 1.9E-07 6.5E-12 104.9 12.8 45 114-158 238-292 (583)
131 2a8x_A Dihydrolipoyl dehydroge 98.6 1.1E-07 3.9E-12 104.0 10.6 142 6-159 3-146 (464)
132 2qae_A Lipoamide, dihydrolipoy 98.6 1.6E-07 5.5E-12 102.9 11.6 144 6-158 2-147 (468)
133 1dxl_A Dihydrolipoamide dehydr 98.6 2E-07 6.8E-12 102.2 12.2 145 5-159 5-151 (470)
134 2wpf_A Trypanothione reductase 98.6 1E-07 3.6E-12 105.3 9.9 35 3-37 4-39 (495)
135 4gde_A UDP-galactopyranose mut 98.6 9.7E-08 3.3E-12 105.4 9.7 39 6-44 10-49 (513)
136 1ges_A Glutathione reductase; 98.6 9.6E-08 3.3E-12 104.2 9.3 34 5-38 3-36 (450)
137 1q1r_A Putidaredoxin reductase 98.6 8.4E-08 2.9E-12 104.1 8.6 111 1-159 1-114 (431)
138 1zmd_A Dihydrolipoyl dehydroge 98.6 1.1E-07 3.7E-12 104.4 9.3 140 6-158 6-151 (474)
139 3i6d_A Protoporphyrinogen oxid 98.6 1.1E-07 3.9E-12 103.5 9.3 38 6-43 5-48 (470)
140 1pn0_A Phenol 2-monooxygenase; 98.5 5.6E-07 1.9E-11 103.0 14.8 120 6-132 8-152 (665)
141 3kkj_A Amine oxidase, flavin-c 98.5 6.1E-08 2.1E-12 95.5 5.9 37 7-43 3-39 (336)
142 2eq6_A Pyruvate dehydrogenase 98.5 2.2E-07 7.5E-12 101.8 10.3 34 6-39 6-39 (464)
143 3p1w_A Rabgdi protein; GDI RAB 98.5 2.1E-07 7.2E-12 101.6 10.0 55 103-158 257-313 (475)
144 1fec_A Trypanothione reductase 98.5 2.6E-07 9E-12 101.9 10.7 31 6-36 3-34 (490)
145 1s3e_A Amine oxidase [flavin-c 98.5 3E-07 1E-11 102.1 10.4 39 5-43 3-41 (520)
146 3q9t_A Choline dehydrogenase a 98.5 8.3E-07 2.8E-11 99.6 13.7 36 5-40 5-41 (577)
147 3kd9_A Coenzyme A disulfide re 98.5 1.8E-07 6.1E-12 102.0 8.0 106 7-158 4-113 (449)
148 3oc4_A Oxidoreductase, pyridin 98.5 1.9E-07 6.4E-12 101.9 8.2 109 7-159 3-115 (452)
149 1mo9_A ORF3; nucleotide bindin 98.5 2.7E-07 9.3E-12 102.6 9.2 36 4-39 41-76 (523)
150 2yqu_A 2-oxoglutarate dehydrog 98.5 1.8E-07 6.1E-12 102.2 7.6 34 6-39 1-34 (455)
151 3iwa_A FAD-dependent pyridine 98.4 2.4E-07 8E-12 101.7 8.0 33 7-39 4-38 (472)
152 3nks_A Protoporphyrinogen oxid 98.4 2.4E-07 8.1E-12 101.4 8.0 53 104-158 236-289 (477)
153 3h28_A Sulfide-quinone reducta 98.4 1E-07 3.4E-12 103.4 4.6 50 353-402 276-338 (430)
154 2bc0_A NADH oxidase; flavoprot 98.4 1.9E-07 6.6E-12 103.0 6.8 108 7-159 36-149 (490)
155 3cgb_A Pyridine nucleotide-dis 98.4 2.5E-07 8.4E-12 101.8 7.6 111 6-159 36-152 (480)
156 1lvl_A Dihydrolipoamide dehydr 98.4 4.6E-07 1.6E-11 99.0 9.7 33 6-38 5-37 (458)
157 3t37_A Probable dehydrogenase; 98.4 1E-06 3.5E-11 97.8 12.3 51 108-158 216-270 (526)
158 1onf_A GR, grase, glutathione 98.4 2.8E-07 9.4E-12 102.0 7.6 32 7-38 3-34 (500)
159 2ivd_A PPO, PPOX, protoporphyr 98.4 2.7E-07 9.2E-12 101.1 7.1 41 4-44 14-54 (478)
160 3ics_A Coenzyme A-disulfide re 98.4 3E-07 1E-11 103.8 7.5 110 6-158 36-151 (588)
161 2x8g_A Thioredoxin glutathione 98.4 7.9E-07 2.7E-11 100.5 11.0 34 5-38 106-139 (598)
162 2cdu_A NADPH oxidase; flavoenz 98.4 3.2E-07 1.1E-11 100.0 7.1 111 7-159 1-117 (452)
163 1xhc_A NADH oxidase /nitrite r 98.4 3.6E-07 1.2E-11 96.9 7.2 31 7-38 9-39 (367)
164 3pl8_A Pyranose 2-oxidase; sub 98.4 1.1E-06 3.8E-11 99.7 11.3 36 5-40 45-80 (623)
165 2vvm_A Monoamine oxidase N; FA 98.4 1.1E-06 3.9E-11 96.6 11.2 55 103-158 256-311 (495)
166 3lov_A Protoporphyrinogen oxid 98.4 8.3E-07 2.8E-11 97.1 9.9 38 6-43 4-43 (475)
167 3hyw_A Sulfide-quinone reducta 98.4 1.6E-07 5.3E-12 101.9 3.9 103 8-158 4-108 (430)
168 1nhp_A NADH peroxidase; oxidor 98.3 4.4E-07 1.5E-11 98.8 7.0 109 7-159 1-115 (447)
169 3ntd_A FAD-dependent pyridine 98.3 3.6E-07 1.2E-11 102.5 6.3 33 7-39 2-36 (565)
170 3fg2_P Putative rubredoxin red 98.3 7.9E-07 2.7E-11 95.4 8.7 106 7-158 2-109 (404)
171 1y56_A Hypothetical protein PH 98.3 8.9E-07 3.1E-11 97.7 9.2 109 6-159 108-219 (493)
172 2gag_A Heterotetrameric sarcos 98.3 2.7E-06 9.1E-11 101.4 13.7 34 6-39 128-161 (965)
173 3c4a_A Probable tryptophan hyd 98.3 7E-08 2.4E-12 102.8 -0.3 136 8-159 2-143 (381)
174 2v3a_A Rubredoxin reductase; a 98.3 1E-06 3.4E-11 93.9 8.6 106 6-159 4-113 (384)
175 3ef6_A Toluene 1,2-dioxygenase 98.3 9E-07 3.1E-11 95.2 6.8 105 7-158 3-110 (410)
176 3fim_B ARYL-alcohol oxidase; A 98.2 1.5E-06 5.2E-11 97.2 8.8 34 6-39 2-36 (566)
177 2gqw_A Ferredoxin reductase; f 98.2 8E-07 2.7E-11 95.6 6.1 104 5-158 6-112 (408)
178 3fg2_P Putative rubredoxin red 98.2 9.1E-06 3.1E-10 87.1 13.5 97 7-158 143-240 (404)
179 2jbv_A Choline oxidase; alcoho 98.2 5.4E-06 1.8E-10 92.6 10.9 47 112-158 218-272 (546)
180 4gut_A Lysine-specific histone 98.2 1E-05 3.5E-10 93.8 13.4 38 6-43 336-373 (776)
181 3ihm_A Styrene monooxygenase A 98.2 1.3E-06 4.5E-11 94.6 5.6 33 7-39 23-55 (430)
182 1m6i_A Programmed cell death p 98.1 1.9E-06 6.6E-11 95.0 6.7 130 5-159 10-144 (493)
183 2v3a_A Rubredoxin reductase; a 98.1 1.4E-05 4.7E-10 85.0 13.1 96 7-158 146-242 (384)
184 2bcg_G Secretory pathway GDP d 98.1 2.1E-06 7.1E-11 93.7 6.4 54 103-158 243-299 (453)
185 3k30_A Histamine dehydrogenase 98.1 1.2E-06 4.2E-11 100.7 4.7 45 362-406 640-684 (690)
186 3fpz_A Thiazole biosynthetic e 98.1 9.4E-07 3.2E-11 91.9 3.4 39 6-44 65-105 (326)
187 2yqu_A 2-oxoglutarate dehydrog 98.1 1.7E-05 5.7E-10 86.4 13.0 95 7-158 168-263 (455)
188 1ges_A Glutathione reductase; 98.1 1.8E-05 6.3E-10 86.0 12.3 96 7-158 168-264 (450)
189 4b63_A L-ornithine N5 monooxyg 98.0 6E-05 2.1E-09 83.2 16.3 59 99-158 142-213 (501)
190 1q1r_A Putidaredoxin reductase 98.0 1.9E-05 6.6E-10 85.4 12.1 97 7-158 150-249 (431)
191 2b9w_A Putative aminooxidase; 98.0 5.1E-06 1.7E-10 89.4 6.8 43 1-43 1-44 (424)
192 1v0j_A UDP-galactopyranose mut 98.0 3.7E-06 1.3E-10 90.2 5.6 43 3-45 4-47 (399)
193 1nhp_A NADH peroxidase; oxidor 98.0 2.6E-05 9E-10 84.6 12.1 96 6-158 149-245 (447)
194 1n4w_A CHOD, cholesterol oxida 98.0 4.5E-05 1.5E-09 84.2 14.2 35 5-39 4-38 (504)
195 2r9z_A Glutathione amide reduc 98.0 4.5E-05 1.6E-09 83.3 14.0 95 7-158 167-263 (463)
196 2eq6_A Pyruvate dehydrogenase 98.0 5.2E-05 1.8E-09 82.8 14.2 95 7-158 170-270 (464)
197 1gpe_A Protein (glucose oxidas 98.0 2.6E-05 8.7E-10 87.9 12.0 35 5-39 23-58 (587)
198 1v59_A Dihydrolipoamide dehydr 98.0 5.4E-05 1.9E-09 82.9 13.9 96 7-158 184-286 (478)
199 4g6h_A Rotenone-insensitive NA 98.0 7.8E-06 2.7E-10 90.3 7.0 46 353-398 354-402 (502)
200 2cdu_A NADPH oxidase; flavoenz 98.0 5E-05 1.7E-09 82.5 13.3 96 7-158 150-246 (452)
201 1fec_A Trypanothione reductase 97.9 3.8E-05 1.3E-09 84.6 12.1 96 7-158 188-287 (490)
202 1ebd_A E3BD, dihydrolipoamide 97.9 7.4E-05 2.5E-09 81.3 14.1 95 7-158 171-269 (455)
203 2hqm_A GR, grase, glutathione 97.9 4.7E-05 1.6E-09 83.5 12.5 96 7-158 186-284 (479)
204 3ef6_A Toluene 1,2-dioxygenase 97.9 2E-05 6.7E-10 84.7 8.8 96 7-158 144-240 (410)
205 2wpf_A Trypanothione reductase 97.9 5E-05 1.7E-09 83.7 12.2 96 7-158 192-291 (495)
206 1onf_A GR, grase, glutathione 97.9 6.5E-05 2.2E-09 82.9 13.1 96 7-158 177-274 (500)
207 2gqw_A Ferredoxin reductase; f 97.9 5.9E-05 2E-09 80.9 12.3 92 7-158 146-238 (408)
208 1trb_A Thioredoxin reductase; 97.9 0.00011 3.6E-09 75.5 13.5 93 7-157 146-245 (320)
209 1mo9_A ORF3; nucleotide bindin 97.9 7.5E-05 2.6E-09 82.8 12.9 96 7-158 215-315 (523)
210 3iwa_A FAD-dependent pyridine 97.9 8.1E-05 2.8E-09 81.4 12.9 96 7-158 160-257 (472)
211 3oc4_A Oxidoreductase, pyridin 97.9 0.00012 3.9E-09 79.7 14.0 95 7-158 148-243 (452)
212 1ps9_A 2,4-dienoyl-COA reducta 97.9 1.4E-05 4.7E-10 91.6 6.9 34 6-39 373-406 (671)
213 2yg5_A Putrescine oxidase; oxi 97.8 7.8E-06 2.7E-10 88.7 4.2 42 1-44 1-42 (453)
214 1xdi_A RV3303C-LPDA; reductase 97.8 0.00011 3.7E-09 81.0 13.5 95 7-158 183-278 (499)
215 1zmd_A Dihydrolipoyl dehydroge 97.8 9.8E-05 3.4E-09 80.7 12.9 97 7-158 179-281 (474)
216 2bc0_A NADH oxidase; flavoprot 97.8 7.5E-05 2.6E-09 82.1 12.0 95 7-158 195-290 (490)
217 4dsg_A UDP-galactopyranose mut 97.8 1.6E-05 5.6E-10 87.3 6.1 46 1-46 4-50 (484)
218 4dna_A Probable glutathione re 97.8 9.8E-05 3.3E-09 80.5 12.3 95 7-158 171-267 (463)
219 1ojt_A Surface protein; redox- 97.8 9.6E-05 3.3E-09 81.1 12.1 95 7-158 186-285 (482)
220 3cgb_A Pyridine nucleotide-dis 97.8 0.00011 3.8E-09 80.5 12.4 94 7-158 187-281 (480)
221 3hdq_A UDP-galactopyranose mut 97.8 2.2E-05 7.4E-10 83.9 6.4 39 5-43 28-66 (397)
222 3o0h_A Glutathione reductase; 97.8 0.00012 4.2E-09 80.2 12.7 95 7-158 192-287 (484)
223 3itj_A Thioredoxin reductase 1 97.8 0.0001 3.6E-09 75.9 11.0 90 7-157 174-269 (338)
224 1zk7_A HGII, reductase, mercur 97.7 0.00021 7.2E-09 77.9 13.8 93 7-158 177-270 (467)
225 2qae_A Lipoamide, dihydrolipoy 97.7 0.00021 7.3E-09 77.9 13.8 95 7-158 175-275 (468)
226 1lvl_A Dihydrolipoamide dehydr 97.7 8.9E-05 3.1E-09 80.8 10.7 93 7-158 172-267 (458)
227 3ntd_A FAD-dependent pyridine 97.7 0.00021 7.2E-09 79.8 13.8 94 8-158 153-266 (565)
228 1i8t_A UDP-galactopyranose mut 97.7 2.2E-05 7.4E-10 83.1 5.2 39 6-44 1-39 (367)
229 2jae_A L-amino acid oxidase; o 97.7 2.8E-05 9.4E-10 85.3 6.2 40 4-43 9-48 (489)
230 2a8x_A Dihydrolipoyl dehydroge 97.7 0.00023 7.9E-09 77.5 13.5 95 7-158 172-270 (464)
231 1d5t_A Guanine nucleotide diss 97.7 3.2E-05 1.1E-09 83.7 6.4 42 3-44 3-44 (433)
232 1xhc_A NADH oxidase /nitrite r 97.7 0.00011 3.9E-09 77.5 10.4 89 7-158 144-233 (367)
233 1sez_A Protoporphyrinogen oxid 97.7 2.3E-05 7.9E-10 86.2 5.2 40 5-44 12-51 (504)
234 3ic9_A Dihydrolipoamide dehydr 97.7 0.00027 9.4E-09 77.7 13.8 94 7-158 175-273 (492)
235 1rsg_A FMS1 protein; FAD bindi 97.7 2.4E-05 8.2E-10 86.6 5.3 38 6-44 8-46 (516)
236 3s5w_A L-ornithine 5-monooxyge 97.7 0.00027 9.3E-09 76.7 13.5 140 7-158 228-376 (463)
237 1m6i_A Programmed cell death p 97.7 0.00022 7.7E-09 78.4 12.7 96 7-158 181-281 (493)
238 3urh_A Dihydrolipoyl dehydroge 97.7 0.00032 1.1E-08 77.0 13.7 95 7-158 199-299 (491)
239 3lad_A Dihydrolipoamide dehydr 97.7 0.00037 1.3E-08 76.2 14.0 95 7-158 181-279 (476)
240 3ab1_A Ferredoxin--NADP reduct 97.7 0.0002 6.9E-09 74.9 11.5 92 8-157 165-261 (360)
241 2zbw_A Thioredoxin reductase; 97.6 0.00033 1.1E-08 72.3 12.8 92 7-157 153-250 (335)
242 1dxl_A Dihydrolipoamide dehydr 97.6 0.00017 5.9E-09 78.6 11.0 95 7-158 178-278 (470)
243 2e1m_A L-glutamate oxidase; L- 97.6 4.8E-05 1.6E-09 80.6 6.2 39 5-43 43-82 (376)
244 1fl2_A Alkyl hydroperoxide red 97.6 0.00029 9.9E-09 71.9 11.7 90 7-157 145-240 (310)
245 3dk9_A Grase, GR, glutathione 97.6 0.00043 1.5E-08 75.6 13.8 96 7-158 188-292 (478)
246 2q0l_A TRXR, thioredoxin reduc 97.6 0.00043 1.5E-08 70.6 12.7 90 7-157 144-239 (311)
247 3ics_A Coenzyme A-disulfide re 97.6 0.00029 1E-08 79.2 12.3 93 7-158 188-281 (588)
248 4b1b_A TRXR, thioredoxin reduc 97.6 0.00045 1.5E-08 76.8 13.4 94 7-158 224-318 (542)
249 3dgh_A TRXR-1, thioredoxin red 97.5 0.00048 1.6E-08 75.4 12.4 95 7-158 188-288 (483)
250 3cty_A Thioredoxin reductase; 97.5 0.00035 1.2E-08 71.6 10.4 89 7-157 156-250 (319)
251 3r9u_A Thioredoxin reductase; 97.5 0.00055 1.9E-08 69.6 11.8 90 7-157 148-242 (315)
252 2q7v_A Thioredoxin reductase; 97.5 0.00065 2.2E-08 69.9 11.9 89 7-157 153-247 (325)
253 2iid_A L-amino-acid oxidase; f 97.4 9.6E-05 3.3E-09 81.2 5.5 39 5-43 32-70 (498)
254 3dgz_A Thioredoxin reductase 2 97.4 0.00097 3.3E-08 73.1 13.5 94 8-158 187-286 (488)
255 2bi7_A UDP-galactopyranose mut 97.4 0.00011 3.6E-09 78.3 5.4 38 7-44 4-41 (384)
256 3kd9_A Coenzyme A disulfide re 97.4 0.0006 2.1E-08 73.9 11.3 94 7-158 149-243 (449)
257 4eqs_A Coenzyme A disulfide re 97.4 0.00045 1.5E-08 74.7 10.0 91 7-158 148-239 (437)
258 3d1c_A Flavin-containing putat 97.4 0.00088 3E-08 70.0 11.8 101 8-158 168-271 (369)
259 1vdc_A NTR, NADPH dependent th 97.4 0.00081 2.8E-08 69.3 11.3 90 7-157 160-257 (333)
260 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00067 2.3E-08 75.1 10.8 90 7-157 356-451 (521)
261 3l8k_A Dihydrolipoyl dehydroge 97.3 0.0011 3.8E-08 72.2 12.4 93 7-158 173-271 (466)
262 1ju2_A HydroxynitrIle lyase; f 97.3 7.9E-05 2.7E-09 82.9 3.2 34 5-39 25-58 (536)
263 3f8d_A Thioredoxin reductase ( 97.3 0.00099 3.4E-08 67.9 10.5 89 7-157 155-249 (323)
264 1b37_A Protein (polyamine oxid 97.3 0.00023 7.8E-09 77.7 5.9 39 5-43 3-42 (472)
265 1kdg_A CDH, cellobiose dehydro 97.3 0.00017 5.9E-09 80.3 5.0 51 108-158 201-260 (546)
266 1o94_A Tmadh, trimethylamine d 97.2 0.00024 8.3E-09 82.0 5.8 34 6-39 389-422 (729)
267 3gwf_A Cyclohexanone monooxyge 97.2 0.0021 7.1E-08 71.5 12.8 33 7-39 179-211 (540)
268 3fbs_A Oxidoreductase; structu 97.2 0.00052 1.8E-08 69.2 7.1 83 7-157 142-224 (297)
269 4g6h_A Rotenone-insensitive NA 97.1 0.0015 5.2E-08 71.9 10.9 93 8-158 219-331 (502)
270 2x8g_A Thioredoxin glutathione 97.1 0.0032 1.1E-07 70.8 13.9 31 8-38 288-318 (598)
271 3k30_A Histamine dehydrogenase 97.1 0.00046 1.6E-08 79.1 6.6 93 8-158 525-623 (690)
272 3klj_A NAD(FAD)-dependent dehy 97.1 0.00035 1.2E-08 74.3 5.0 32 7-38 147-178 (385)
273 1vg0_A RAB proteins geranylger 97.0 0.00055 1.9E-08 77.1 6.4 38 3-40 5-42 (650)
274 2z3y_A Lysine-specific histone 97.0 0.0005 1.7E-08 78.5 5.9 38 6-43 107-144 (662)
275 3qfa_A Thioredoxin reductase 1 97.0 0.0058 2E-07 67.5 14.3 94 8-158 212-314 (519)
276 1lqt_A FPRA; NADP+ derivative, 97.0 0.00052 1.8E-08 74.7 5.6 44 354-397 342-387 (456)
277 3uox_A Otemo; baeyer-villiger 97.0 0.0035 1.2E-07 69.7 12.3 33 7-39 186-218 (545)
278 2a87_A TRXR, TR, thioredoxin r 97.0 0.0013 4.6E-08 67.9 8.2 89 7-157 156-250 (335)
279 3lzw_A Ferredoxin--NADP reduct 96.9 0.0039 1.3E-07 63.7 10.8 88 7-157 155-248 (332)
280 4a5l_A Thioredoxin reductase; 96.9 0.0045 1.5E-07 62.9 11.2 41 356-397 270-312 (314)
281 4ap3_A Steroid monooxygenase; 96.9 0.0028 9.6E-08 70.6 10.2 33 7-39 192-224 (549)
282 2xag_A Lysine-specific histone 96.9 0.00075 2.6E-08 78.8 5.7 38 6-43 278-315 (852)
283 1coy_A Cholesterol oxidase; ox 96.9 0.00075 2.6E-08 74.5 5.3 35 5-39 10-44 (507)
284 1cjc_A Protein (adrenodoxin re 96.8 0.00085 2.9E-08 73.1 4.8 45 354-398 350-396 (460)
285 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0039 1.3E-07 67.3 8.3 32 7-38 213-245 (447)
286 2xve_A Flavin-containing monoo 96.5 0.0048 1.6E-07 67.1 8.8 32 7-38 198-229 (464)
287 1gte_A Dihydropyrimidine dehyd 96.5 0.017 5.7E-07 69.2 13.7 31 8-38 334-365 (1025)
288 2gag_A Heterotetrameric sarcos 96.5 0.0053 1.8E-07 73.0 9.3 89 7-160 285-384 (965)
289 1cjc_A Protein (adrenodoxin re 96.3 0.014 4.9E-07 63.3 10.8 32 7-38 146-198 (460)
290 2vdc_G Glutamate synthase [NAD 96.3 0.0091 3.1E-07 64.8 9.0 32 7-38 265-297 (456)
291 1o94_A Tmadh, trimethylamine d 96.2 0.0046 1.6E-07 71.3 6.5 32 7-38 529-562 (729)
292 1lqt_A FPRA; NADP+ derivative, 96.2 0.0094 3.2E-07 64.7 8.5 32 7-38 148-200 (456)
293 4fk1_A Putative thioredoxin re 96.0 0.0057 2E-07 62.2 5.4 87 8-158 148-235 (304)
294 3ayj_A Pro-enzyme of L-phenyla 96.0 0.0023 8E-08 72.9 2.6 34 6-39 56-97 (721)
295 4gcm_A TRXR, thioredoxin reduc 96.0 0.071 2.4E-06 54.0 13.5 31 8-38 147-177 (312)
296 4a9w_A Monooxygenase; baeyer-v 96.0 0.0074 2.5E-07 62.1 6.1 31 7-38 164-194 (357)
297 1ps9_A 2,4-dienoyl-COA reducta 95.6 0.046 1.6E-06 62.3 11.4 28 7-34 495-522 (671)
298 4b63_A L-ornithine N5 monooxyg 94.9 0.33 1.1E-05 53.1 14.8 33 7-39 247-281 (501)
299 3llv_A Exopolyphosphatase-rela 94.8 0.03 1E-06 49.9 5.1 33 6-38 6-38 (141)
300 3h8l_A NADH oxidase; membrane 94.7 0.1 3.5E-06 55.2 9.9 49 104-158 220-269 (409)
301 1w4x_A Phenylacetone monooxyge 94.4 0.15 5.1E-06 56.4 10.7 33 7-39 187-219 (542)
302 3h28_A Sulfide-quinone reducta 94.2 0.043 1.5E-06 58.8 5.6 104 7-158 3-108 (430)
303 3sx6_A Sulfide-quinone reducta 93.1 0.19 6.7E-06 53.7 8.5 48 356-403 290-350 (437)
304 1lss_A TRK system potassium up 93.1 0.083 2.8E-06 46.4 4.6 32 7-38 5-36 (140)
305 2g1u_A Hypothetical protein TM 93.1 0.087 3E-06 47.7 4.9 33 7-39 20-52 (155)
306 2hmt_A YUAA protein; RCK, KTN, 92.9 0.088 3E-06 46.4 4.5 32 7-38 7-38 (144)
307 3ado_A Lambda-crystallin; L-gu 92.8 0.091 3.1E-06 54.0 5.0 38 1-38 1-38 (319)
308 3fwz_A Inner membrane protein 92.5 0.17 5.7E-06 45.0 5.8 32 7-38 8-39 (140)
309 3i83_A 2-dehydropantoate 2-red 92.4 0.093 3.2E-06 53.8 4.5 31 8-38 4-34 (320)
310 3hn2_A 2-dehydropantoate 2-red 92.2 0.097 3.3E-06 53.5 4.4 31 8-38 4-34 (312)
311 4e12_A Diketoreductase; oxidor 92.0 0.14 4.9E-06 51.4 5.2 32 7-38 5-36 (283)
312 1id1_A Putative potassium chan 92.0 0.18 6.1E-06 45.5 5.4 31 8-38 5-35 (153)
313 3ic5_A Putative saccharopine d 91.9 0.14 4.8E-06 43.3 4.4 32 7-38 6-38 (118)
314 3g17_A Similar to 2-dehydropan 91.6 0.11 3.6E-06 52.7 3.8 31 8-38 4-34 (294)
315 3hyw_A Sulfide-quinone reducta 91.2 0.13 4.6E-06 54.9 4.2 51 352-402 275-338 (430)
316 2dpo_A L-gulonate 3-dehydrogen 91.0 0.19 6.7E-06 51.5 5.0 32 7-38 7-38 (319)
317 1f0y_A HCDH, L-3-hydroxyacyl-C 90.8 0.22 7.6E-06 50.4 5.3 32 7-38 16-47 (302)
318 3kkj_A Amine oxidase, flavin-c 90.6 0.25 8.6E-06 47.2 5.3 43 357-400 289-331 (336)
319 3ego_A Probable 2-dehydropanto 90.4 0.2 6.7E-06 51.1 4.5 30 8-38 4-33 (307)
320 3ghy_A Ketopantoate reductase 90.4 0.25 8.7E-06 50.9 5.4 32 7-38 4-35 (335)
321 3gg2_A Sugar dehydrogenase, UD 90.2 0.21 7.1E-06 53.9 4.6 31 8-38 4-34 (450)
322 3c85_A Putative glutathione-re 90.1 0.21 7.3E-06 46.3 4.1 31 8-38 41-72 (183)
323 3tl2_A Malate dehydrogenase; c 89.9 0.31 1E-05 50.0 5.4 37 1-38 4-41 (315)
324 2ewd_A Lactate dehydrogenase,; 89.8 0.27 9.4E-06 50.3 4.9 32 7-38 5-37 (317)
325 1y6j_A L-lactate dehydrogenase 89.7 0.3 1E-05 50.1 5.1 38 1-38 1-41 (318)
326 1bg6_A N-(1-D-carboxylethyl)-L 89.6 0.28 9.6E-06 50.7 4.9 32 7-38 5-36 (359)
327 3mog_A Probable 3-hydroxybutyr 89.5 0.31 1.1E-05 53.0 5.3 37 1-38 1-37 (483)
328 2ew2_A 2-dehydropantoate 2-red 89.4 0.27 9.1E-06 49.7 4.5 31 8-38 5-35 (316)
329 2bcg_G Secretory pathway GDP d 89.4 0.61 2.1E-05 50.1 7.6 42 3-44 8-49 (453)
330 1pzg_A LDH, lactate dehydrogen 89.3 0.33 1.1E-05 50.1 5.1 32 7-38 10-42 (331)
331 3k96_A Glycerol-3-phosphate de 89.2 0.36 1.2E-05 50.4 5.4 32 7-38 30-61 (356)
332 3l4b_C TRKA K+ channel protien 89.0 0.33 1.1E-05 46.5 4.6 31 8-38 2-32 (218)
333 3qha_A Putative oxidoreductase 88.9 0.33 1.1E-05 49.1 4.7 33 7-39 16-48 (296)
334 3dfz_A SIRC, precorrin-2 dehyd 88.9 0.34 1.2E-05 46.9 4.6 32 7-38 32-63 (223)
335 3lxd_A FAD-dependent pyridine 88.8 0.36 1.2E-05 51.1 5.1 33 7-39 153-185 (415)
336 4dio_A NAD(P) transhydrogenase 88.7 0.36 1.2E-05 51.0 5.0 33 7-39 191-223 (405)
337 3g0o_A 3-hydroxyisobutyrate de 88.7 0.36 1.2E-05 48.9 4.9 38 1-38 1-39 (303)
338 4ffl_A PYLC; amino acid, biosy 88.7 0.44 1.5E-05 49.5 5.6 35 8-42 3-37 (363)
339 3l6d_A Putative oxidoreductase 88.2 0.54 1.9E-05 47.7 5.8 38 1-38 1-41 (306)
340 1t2d_A LDH-P, L-lactate dehydr 88.1 0.49 1.7E-05 48.6 5.4 32 7-38 5-37 (322)
341 2hjr_A Malate dehydrogenase; m 88.1 0.47 1.6E-05 48.8 5.3 32 7-38 15-47 (328)
342 1ks9_A KPA reductase;, 2-dehyd 88.0 0.47 1.6E-05 47.3 5.1 32 8-39 2-33 (291)
343 1lld_A L-lactate dehydrogenase 88.0 0.43 1.5E-05 48.6 4.9 32 7-38 8-41 (319)
344 2x5o_A UDP-N-acetylmuramoylala 87.8 0.37 1.3E-05 51.7 4.5 32 8-39 7-38 (439)
345 1d5t_A Guanine nucleotide diss 87.7 0.67 2.3E-05 49.5 6.4 54 103-158 235-289 (433)
346 1jw9_B Molybdopterin biosynthe 87.6 0.37 1.3E-05 47.5 4.0 32 7-38 32-64 (249)
347 2raf_A Putative dinucleotide-b 87.4 0.55 1.9E-05 44.8 5.0 33 7-39 20-52 (209)
348 1kyq_A Met8P, siroheme biosynt 87.2 0.32 1.1E-05 48.7 3.3 32 7-38 14-45 (274)
349 1ur5_A Malate dehydrogenase; o 87.0 0.49 1.7E-05 48.2 4.7 31 8-38 4-35 (309)
350 1zcj_A Peroxisomal bifunctiona 87.0 0.53 1.8E-05 50.9 5.1 31 8-38 39-69 (463)
351 1z82_A Glycerol-3-phosphate de 87.0 0.49 1.7E-05 48.6 4.7 32 7-38 15-46 (335)
352 3p2y_A Alanine dehydrogenase/p 86.9 0.42 1.4E-05 50.1 4.0 32 7-38 185-216 (381)
353 2y0c_A BCEC, UDP-glucose dehyd 86.7 0.52 1.8E-05 51.2 4.9 32 7-38 9-40 (478)
354 4a7p_A UDP-glucose dehydrogena 86.2 0.59 2E-05 50.2 4.9 35 6-40 8-42 (446)
355 3lk7_A UDP-N-acetylmuramoylala 86.1 0.56 1.9E-05 50.4 4.7 32 7-38 10-41 (451)
356 4huj_A Uncharacterized protein 86.0 0.47 1.6E-05 45.7 3.6 32 7-38 24-56 (220)
357 2v6b_A L-LDH, L-lactate dehydr 85.9 0.62 2.1E-05 47.3 4.7 31 8-38 2-34 (304)
358 1pjc_A Protein (L-alanine dehy 85.9 0.58 2E-05 48.8 4.6 32 7-38 168-199 (361)
359 3k6j_A Protein F01G10.3, confi 85.9 0.59 2E-05 50.3 4.7 32 7-38 55-86 (460)
360 2a9f_A Putative malic enzyme ( 85.9 0.53 1.8E-05 49.4 4.1 32 7-38 189-221 (398)
361 1kdg_A CDH, cellobiose dehydro 85.8 1 3.4E-05 49.6 6.7 35 5-39 6-40 (546)
362 3qsg_A NAD-binding phosphogluc 85.8 0.52 1.8E-05 48.0 4.1 33 6-38 24-57 (312)
363 1coy_A Cholesterol oxidase; ox 85.7 1 3.6E-05 49.1 6.7 48 111-158 235-292 (507)
364 1x13_A NAD(P) transhydrogenase 85.7 0.62 2.1E-05 49.4 4.7 32 7-38 173-204 (401)
365 1y56_A Hypothetical protein PH 85.6 0.46 1.6E-05 51.7 3.8 41 354-396 336-376 (493)
366 1ldn_A L-lactate dehydrogenase 85.5 0.69 2.4E-05 47.3 4.9 38 1-38 1-40 (316)
367 1evy_A Glycerol-3-phosphate de 85.5 0.38 1.3E-05 50.1 2.9 31 8-38 17-47 (366)
368 1l7d_A Nicotinamide nucleotide 85.5 0.72 2.5E-05 48.5 5.1 32 7-38 173-204 (384)
369 3c7a_A Octopine dehydrogenase; 85.4 0.4 1.4E-05 50.7 3.1 29 8-36 4-33 (404)
370 2q3e_A UDP-glucose 6-dehydroge 85.0 0.53 1.8E-05 51.0 3.9 32 7-38 6-39 (467)
371 3hwr_A 2-dehydropantoate 2-red 84.9 0.73 2.5E-05 47.0 4.7 31 7-38 20-50 (318)
372 3g79_A NDP-N-acetyl-D-galactos 84.8 0.67 2.3E-05 50.2 4.5 33 7-39 19-53 (478)
373 3doj_A AT3G25530, dehydrogenas 84.8 0.91 3.1E-05 46.1 5.3 34 6-39 21-54 (310)
374 1zej_A HBD-9, 3-hydroxyacyl-CO 84.8 0.73 2.5E-05 46.6 4.5 31 7-38 13-43 (293)
375 4ezb_A Uncharacterized conserv 84.8 0.67 2.3E-05 47.3 4.3 32 7-38 25-57 (317)
376 2uyy_A N-PAC protein; long-cha 84.7 1.1 3.8E-05 45.4 6.0 32 7-38 31-62 (316)
377 3vtf_A UDP-glucose 6-dehydroge 84.6 0.69 2.4E-05 49.5 4.4 33 6-38 21-53 (444)
378 1nyt_A Shikimate 5-dehydrogena 84.6 0.8 2.7E-05 45.6 4.7 32 7-38 120-151 (271)
379 3oj0_A Glutr, glutamyl-tRNA re 84.6 0.38 1.3E-05 42.8 2.0 32 7-38 22-53 (144)
380 3phh_A Shikimate dehydrogenase 84.5 0.94 3.2E-05 45.2 5.1 32 7-38 119-150 (269)
381 3gvi_A Malate dehydrogenase; N 84.5 0.98 3.4E-05 46.3 5.4 32 7-38 8-40 (324)
382 1vpd_A Tartronate semialdehyde 84.3 0.62 2.1E-05 46.8 3.8 31 8-38 7-37 (299)
383 2qyt_A 2-dehydropantoate 2-red 83.9 0.58 2E-05 47.3 3.4 31 7-37 9-45 (317)
384 3gt0_A Pyrroline-5-carboxylate 83.8 1.2 3.9E-05 43.6 5.4 31 8-38 4-38 (247)
385 2eez_A Alanine dehydrogenase; 83.7 0.83 2.8E-05 47.7 4.6 32 7-38 167-198 (369)
386 3d0o_A L-LDH 1, L-lactate dehy 83.7 0.82 2.8E-05 46.7 4.4 32 7-38 7-40 (317)
387 2cul_A Glucose-inhibited divis 83.7 0.89 3E-05 43.9 4.5 38 358-396 193-231 (232)
388 1vl6_A Malate oxidoreductase; 83.6 0.76 2.6E-05 48.1 4.1 33 6-38 192-225 (388)
389 1yj8_A Glycerol-3-phosphate de 83.6 0.72 2.5E-05 48.2 4.0 31 8-38 23-60 (375)
390 3fi9_A Malate dehydrogenase; s 83.3 1.3 4.4E-05 45.8 5.7 32 7-38 9-43 (343)
391 3cky_A 2-hydroxymethyl glutara 83.1 0.86 2.9E-05 45.8 4.2 32 7-38 5-36 (301)
392 1guz_A Malate dehydrogenase; o 83.0 1.1 3.7E-05 45.7 4.9 31 8-38 2-34 (310)
393 3p7m_A Malate dehydrogenase; p 83.0 1.3 4.4E-05 45.4 5.5 32 7-38 6-38 (321)
394 1mv8_A GMD, GDP-mannose 6-dehy 82.9 0.78 2.7E-05 49.1 4.0 31 8-38 2-32 (436)
395 3dtt_A NADP oxidoreductase; st 82.6 1.1 3.8E-05 43.7 4.7 32 7-38 20-51 (245)
396 2vhw_A Alanine dehydrogenase; 82.5 0.99 3.4E-05 47.3 4.6 32 7-38 169-200 (377)
397 3c24_A Putative oxidoreductase 82.4 1.1 3.7E-05 44.8 4.7 32 7-38 12-44 (286)
398 4dll_A 2-hydroxy-3-oxopropiona 82.3 1 3.5E-05 46.0 4.5 32 7-38 32-63 (320)
399 1txg_A Glycerol-3-phosphate de 82.2 0.87 3E-05 46.4 3.9 30 8-37 2-31 (335)
400 3pef_A 6-phosphogluconate dehy 82.1 1.2 3.9E-05 44.6 4.7 32 8-39 3-34 (287)
401 3pid_A UDP-glucose 6-dehydroge 82.1 1.1 3.7E-05 47.9 4.7 31 7-38 37-67 (432)
402 3pqe_A L-LDH, L-lactate dehydr 82.1 1.1 3.8E-05 46.0 4.6 32 7-38 6-39 (326)
403 3rui_A Ubiquitin-like modifier 82.1 1.1 3.9E-05 46.0 4.7 32 7-38 35-67 (340)
404 2h78_A Hibadh, 3-hydroxyisobut 81.9 1 3.4E-05 45.4 4.2 32 7-38 4-35 (302)
405 1hyh_A L-hicdh, L-2-hydroxyiso 81.9 0.97 3.3E-05 45.9 4.1 31 8-38 3-35 (309)
406 2vns_A Metalloreductase steap3 81.8 1.4 4.7E-05 42.1 5.0 32 7-38 29-60 (215)
407 3pdu_A 3-hydroxyisobutyrate de 81.7 0.93 3.2E-05 45.4 3.8 32 8-39 3-34 (287)
408 1a5z_A L-lactate dehydrogenase 81.4 1 3.4E-05 46.1 4.0 31 8-38 2-34 (319)
409 1zud_1 Adenylyltransferase THI 81.4 1 3.6E-05 44.3 4.0 32 7-38 29-61 (251)
410 2p4q_A 6-phosphogluconate dehy 81.4 1.5 5E-05 47.9 5.5 33 7-39 11-43 (497)
411 2egg_A AROE, shikimate 5-dehyd 81.2 1.2 4.2E-05 44.9 4.6 32 7-38 142-174 (297)
412 4e21_A 6-phosphogluconate dehy 81.0 1.3 4.6E-05 46.0 4.9 32 7-38 23-54 (358)
413 2zyd_A 6-phosphogluconate dehy 81.0 1.3 4.4E-05 48.1 4.9 32 7-38 16-47 (480)
414 3h8v_A Ubiquitin-like modifier 80.9 1.1 3.8E-05 45.2 4.0 32 7-38 37-69 (292)
415 1p77_A Shikimate 5-dehydrogena 80.9 0.95 3.3E-05 45.1 3.6 32 7-38 120-151 (272)
416 1dlj_A UDP-glucose dehydrogena 80.8 1.1 3.8E-05 47.4 4.2 30 8-38 2-31 (402)
417 1ez4_A Lactate dehydrogenase; 80.4 1.3 4.5E-05 45.3 4.5 36 3-38 2-39 (318)
418 2wtb_A MFP2, fatty acid multif 80.4 1.3 4.3E-05 50.7 4.8 31 8-38 314-344 (725)
419 2i6t_A Ubiquitin-conjugating e 80.3 1.2 4.2E-05 45.2 4.2 32 7-38 15-48 (303)
420 3ius_A Uncharacterized conserv 80.3 1.2 4.2E-05 44.0 4.2 31 8-38 7-37 (286)
421 3eag_A UDP-N-acetylmuramate:L- 80.2 1.4 4.7E-05 45.1 4.6 32 7-38 5-37 (326)
422 3l9w_A Glutathione-regulated p 80.2 1.4 4.9E-05 46.7 4.9 33 7-39 5-37 (413)
423 1jay_A Coenzyme F420H2:NADP+ o 80.1 1.4 4.9E-05 41.5 4.4 31 8-38 2-33 (212)
424 3ktd_A Prephenate dehydrogenas 80.1 1.8 6E-05 44.8 5.3 32 7-38 9-40 (341)
425 2rcy_A Pyrroline carboxylate r 80.0 1.5 5.3E-05 42.8 4.8 34 7-40 5-42 (262)
426 3d1l_A Putative NADP oxidoredu 80.0 1.4 4.9E-05 43.3 4.5 32 7-38 11-43 (266)
427 3gpi_A NAD-dependent epimerase 79.8 2 7E-05 42.4 5.6 32 8-39 5-36 (286)
428 1vg0_A RAB proteins geranylger 79.7 3.4 0.00012 46.4 7.8 55 102-156 378-434 (650)
429 2f1k_A Prephenate dehydrogenas 79.5 1.6 5.4E-05 43.2 4.7 31 8-38 2-32 (279)
430 2pv7_A T-protein [includes: ch 79.5 1.9 6.5E-05 43.4 5.3 31 8-38 23-54 (298)
431 3u62_A Shikimate dehydrogenase 79.1 1.8 6.1E-05 42.7 4.8 31 8-38 110-141 (253)
432 3jyo_A Quinate/shikimate dehyd 78.9 1.7 5.9E-05 43.6 4.7 32 7-38 128-160 (283)
433 4g65_A TRK system potassium up 78.9 0.93 3.2E-05 48.9 2.9 33 7-39 4-36 (461)
434 3ojo_A CAP5O; rossmann fold, c 78.7 1.3 4.6E-05 47.2 4.0 32 7-38 12-43 (431)
435 3ond_A Adenosylhomocysteinase; 78.6 1.7 5.6E-05 47.0 4.7 32 7-38 266-297 (488)
436 3tnl_A Shikimate dehydrogenase 78.6 1.7 5.8E-05 44.4 4.6 32 7-38 155-187 (315)
437 1wdk_A Fatty oxidation complex 78.5 1.6 5.3E-05 49.9 4.8 31 8-38 316-346 (715)
438 3don_A Shikimate dehydrogenase 78.3 1.6 5.4E-05 43.7 4.2 33 7-39 118-151 (277)
439 1yqg_A Pyrroline-5-carboxylate 78.3 1.5 5.1E-05 43.0 4.0 31 8-38 2-33 (263)
440 2g5c_A Prephenate dehydrogenas 78.3 1.9 6.7E-05 42.7 4.9 31 8-38 3-35 (281)
441 2izz_A Pyrroline-5-carboxylate 78.1 1.9 6.4E-05 44.0 4.8 32 7-38 23-58 (322)
442 4gwg_A 6-phosphogluconate dehy 78.1 2 6.8E-05 46.6 5.2 33 7-39 5-37 (484)
443 1oju_A MDH, malate dehydrogena 78.0 1.5 5.2E-05 44.3 4.0 31 8-38 2-34 (294)
444 2rir_A Dipicolinate synthase, 78.0 1.8 6.1E-05 43.7 4.6 32 7-38 158-189 (300)
445 2iz1_A 6-phosphogluconate dehy 77.9 2.1 7E-05 46.4 5.3 32 7-38 6-37 (474)
446 1pgj_A 6PGDH, 6-PGDH, 6-phosph 77.9 1.9 6.5E-05 46.7 5.0 31 8-38 3-33 (478)
447 2o3j_A UDP-glucose 6-dehydroge 77.9 1.4 4.6E-05 47.9 3.8 32 7-38 10-43 (481)
448 1pjq_A CYSG, siroheme synthase 77.9 1.6 5.4E-05 47.0 4.3 32 7-38 13-44 (457)
449 3tri_A Pyrroline-5-carboxylate 77.5 2.4 8.4E-05 42.2 5.4 32 7-38 4-38 (280)
450 3zwc_A Peroxisomal bifunctiona 77.4 1.7 5.7E-05 49.8 4.6 31 8-38 318-348 (742)
451 1nvt_A Shikimate 5'-dehydrogen 77.4 1.6 5.6E-05 43.7 4.1 31 7-38 129-159 (287)
452 3ggo_A Prephenate dehydrogenas 77.4 2.5 8.6E-05 43.0 5.5 32 7-38 34-67 (314)
453 4aj2_A L-lactate dehydrogenase 77.3 2 6.8E-05 44.2 4.7 32 7-38 20-53 (331)
454 1x0v_A GPD-C, GPDH-C, glycerol 77.2 1.1 3.9E-05 46.0 2.9 31 8-38 10-47 (354)
455 3dhn_A NAD-dependent epimerase 77.2 2.1 7.2E-05 40.5 4.6 33 7-39 5-38 (227)
456 4gsl_A Ubiquitin-like modifier 77.2 1.9 6.4E-05 47.8 4.7 32 7-38 327-359 (615)
457 2cvz_A Dehydrogenase, 3-hydrox 77.2 1.7 5.8E-05 43.2 4.1 30 8-38 3-32 (289)
458 3d4o_A Dipicolinate synthase s 77.1 2 6.8E-05 43.2 4.6 32 7-38 156-187 (293)
459 3vh1_A Ubiquitin-like modifier 77.0 1.8 6.3E-05 47.8 4.6 32 7-38 328-360 (598)
460 3h5n_A MCCB protein; ubiquitin 77.0 1.6 5.3E-05 45.4 3.9 32 7-38 119-151 (353)
461 3d3w_A L-xylulose reductase; u 76.9 2.8 9.5E-05 40.3 5.5 38 1-38 1-40 (244)
462 3ldh_A Lactate dehydrogenase; 76.9 1.7 5.8E-05 44.6 4.0 32 7-38 22-55 (330)
463 1y8q_A Ubiquitin-like 1 activa 76.8 1.7 6E-05 44.9 4.2 32 7-38 37-69 (346)
464 2pgd_A 6-phosphogluconate dehy 76.7 2.2 7.4E-05 46.3 5.0 32 7-38 3-34 (482)
465 2hk9_A Shikimate dehydrogenase 76.6 1.8 6.1E-05 43.1 4.0 32 7-38 130-161 (275)
466 3pwz_A Shikimate dehydrogenase 76.3 2.3 7.9E-05 42.4 4.7 32 7-38 121-153 (272)
467 2gf2_A Hibadh, 3-hydroxyisobut 76.1 2 6.9E-05 42.9 4.3 31 8-38 2-32 (296)
468 2ahr_A Putative pyrroline carb 76.1 2.2 7.5E-05 41.7 4.5 32 7-38 4-35 (259)
469 2d5c_A AROE, shikimate 5-dehyd 75.6 2.6 9E-05 41.5 4.9 31 8-38 118-148 (263)
470 3t4e_A Quinate/shikimate dehyd 75.6 2.3 7.9E-05 43.3 4.6 32 7-38 149-181 (312)
471 2pbz_A Hypothetical protein; N 75.4 2.1 7.3E-05 43.7 4.3 29 9-38 5-33 (320)
472 2qrj_A Saccharopine dehydrogen 75.4 2.3 8E-05 44.6 4.6 32 7-38 215-250 (394)
473 3nep_X Malate dehydrogenase; h 75.2 2.2 7.4E-05 43.5 4.3 31 8-38 2-34 (314)
474 3fbt_A Chorismate mutase and s 75.0 2 6.9E-05 43.1 3.9 32 7-38 123-155 (282)
475 1tt5_B Ubiquitin-activating en 74.9 2.5 8.7E-05 45.1 4.9 32 7-38 41-73 (434)
476 3fpz_A Thiazole biosynthetic e 74.9 0.94 3.2E-05 46.1 1.5 41 355-396 276-324 (326)
477 3orq_A N5-carboxyaminoimidazol 74.8 4.1 0.00014 42.4 6.4 34 7-40 13-46 (377)
478 3q2o_A Phosphoribosylaminoimid 74.8 3.2 0.00011 43.4 5.6 33 7-39 15-47 (389)
479 3b1f_A Putative prephenate deh 74.7 2.2 7.6E-05 42.5 4.2 32 7-38 7-40 (290)
480 1npy_A Hypothetical shikimate 74.7 2.3 7.9E-05 42.3 4.3 32 7-38 120-152 (271)
481 3o8q_A Shikimate 5-dehydrogena 74.7 2.4 8.4E-05 42.4 4.5 32 7-38 127-159 (281)
482 2aef_A Calcium-gated potassium 74.6 1.4 4.9E-05 42.4 2.7 31 7-38 10-40 (234)
483 4e4t_A Phosphoribosylaminoimid 74.2 3.5 0.00012 43.7 5.8 32 7-38 36-67 (419)
484 1leh_A Leucine dehydrogenase; 74.1 2.7 9.2E-05 43.8 4.7 32 7-38 174-205 (364)
485 3vku_A L-LDH, L-lactate dehydr 73.9 2.2 7.6E-05 43.7 4.0 32 7-38 10-43 (326)
486 2d4a_B Malate dehydrogenase; a 73.3 2.5 8.7E-05 42.8 4.2 30 9-38 2-32 (308)
487 1yb4_A Tartronic semialdehyde 73.3 2 6.7E-05 42.9 3.4 31 8-39 5-35 (295)
488 1lu9_A Methylene tetrahydromet 73.0 2.9 0.0001 41.7 4.6 32 7-38 120-152 (287)
489 3ce6_A Adenosylhomocysteinase; 73.0 2.8 9.7E-05 45.4 4.7 32 7-38 275-306 (494)
490 1i36_A Conserved hypothetical 72.9 2.5 8.6E-05 41.4 4.0 30 8-37 2-31 (264)
491 1np3_A Ketol-acid reductoisome 72.9 3.4 0.00012 42.4 5.2 31 8-38 18-48 (338)
492 4gx0_A TRKA domain protein; me 72.8 3.4 0.00012 45.6 5.4 36 7-42 349-384 (565)
493 3oig_A Enoyl-[acyl-carrier-pro 72.7 3.8 0.00013 40.0 5.3 38 1-38 1-42 (266)
494 1gpj_A Glutamyl-tRNA reductase 72.7 2.4 8.3E-05 44.7 4.1 32 7-38 168-200 (404)
495 3r6d_A NAD-dependent epimerase 72.6 3.8 0.00013 38.7 5.1 32 8-39 7-40 (221)
496 3dfu_A Uncharacterized protein 72.6 1.1 3.8E-05 43.6 1.3 32 7-38 7-38 (232)
497 3k5i_A Phosphoribosyl-aminoimi 72.6 3.6 0.00012 43.3 5.4 33 7-40 25-57 (403)
498 2dvm_A Malic enzyme, 439AA lon 72.1 2.8 9.7E-05 44.7 4.4 30 7-36 187-219 (439)
499 2e1m_C L-glutamate oxidase; L- 71.6 1.9 6.5E-05 40.1 2.6 37 363-399 117-155 (181)
500 3gvp_A Adenosylhomocysteinase 71.0 3.5 0.00012 43.8 4.7 32 7-38 221-252 (435)
No 1
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=100.00 E-value=1.7e-147 Score=1240.49 Aligned_cols=617 Identities=62% Similarity=1.022 Sum_probs=485.5
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
+..|||||||||+||++||++||+.|++|+|||++...+|.+.||++.+|.+.++++++++.+++.+..+.+..++++..
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 35699999999999999999999999999999997557889999999999999999999999999888888999999999
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccCCce
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKI 163 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~~~~ 163 (637)
++..++|+++.++.++|+..+...+.+.+++++|+++++++|+++..+++++++|.+.+|..+.|+.||+|||+|++++.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCcc
Confidence 99889999888888999999999999999876799999899999988888899999988989999999999999999999
Q ss_pred eecccccCCCCccccchHHHHHHHHhcCccceecccCCCCcccccccccchhhcccCCCCCCceeeecCCCcCCCccccc
Q psy9395 164 HIGLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSC 243 (637)
Q Consensus 164 ~ig~~~~~~g~~g~~~~~~l~~~l~~~G~~~~~~~~g~~p~~~~~si~~~~~~~~~~d~~~~~~fs~~~~~~~~~~~~sc 243 (637)
++|...++.|+.|+..+..++..|.++|+++.++++|+||+++.++||+++++.+++| ..+.+|||++.......+++|
T Consensus 186 i~G~~~~~~griGg~~a~eLA~~L~~lG~~v~~~~tgtpprid~~sId~~~~~~q~~d-~~~~~fsf~~~~~~~~~q~~c 264 (651)
T 3ces_A 186 HIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGD-NPMPVFSFMGNASQHPQQVPC 264 (651)
T ss_dssp ECC-------------CCHHHHHHHTTTCCEEEECCEECCEEEGGGSCGGGSEEECCC-SSCCCSSTTCCGGGSCCCCCE
T ss_pred ccCcccCCCCCccchhhhHHHHHHHhcCCeEEEecCCCCCcccccccChHHheeeccC-CCCCCCccCCCCCCcccceec
Confidence 9999888888999888889999999999999999999999999999999999999999 788889998652104579999
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccHHHHhhccCCCcccccccccCCCCCcceecCcccCCCCHHHHH
Q psy9395 244 FITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQI 323 (637)
Q Consensus 244 ~~t~t~~~~~~ii~~~~~~~~~~~g~~~~~G~r~~psie~~~~~f~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~ 323 (637)
++++|+.++|++++.+++.+++|.|.+.+.|||||||||+++.+|+++..|++||||||++++++|++|+|++||+++|.
T Consensus 265 ~~t~t~~~~~~ii~~~~~~~~~~~g~i~~~Gprycpsie~k~~rf~~k~~~~i~lepeg~~~~~~y~~G~st~lp~~~q~ 344 (651)
T 3ces_A 265 YITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQM 344 (651)
T ss_dssp EEEECCHHHHHHHHHTGGGC---------------CCHHHHHHHSCSSSCCEEEEEESCTTCCEEEEETCCCCSCHHHHH
T ss_pred ceeCccHHHHHHHHhcccccCcccccccccCCcccccccccccccCCCccceeEeccccccCCeeeecCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred HHHHhccCCcceEEeccccccccceeCccccCccccccCCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9395 324 ELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWI 403 (637)
Q Consensus 324 ~~~~~i~gle~a~v~~~G~~~e~~~v~~~~l~~tlesk~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~~~~~ 403 (637)
+++++|||||||+|+||||+||||||||++|++|||+|.+|||||||||||++||+||||||++||+|||++++|++|++
T Consensus 345 ~~~~~ipGle~a~i~r~Gy~ieyd~i~p~~L~~tle~k~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~~~~~~~~~ 424 (651)
T 3ces_A 345 QIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWA 424 (651)
T ss_dssp HHHHTSTTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhhCCCccceEEEeccceeccCccchhhcCccccccCCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhhHHHHhhhcCCCCccccccchHHHhhhcccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q psy9395 404 PGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQRLKD 483 (637)
Q Consensus 404 ~~r~~~~ig~l~~~l~~~~~~epyrm~tsr~e~rl~~r~dn~~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 483 (637)
++|++||||||||||+||||+||||||||||||||+||+||||.||||+|+++|||+++||+.|++|++.+++++++|++
T Consensus 425 ~~r~~ayiG~liddl~t~g~~epyrm~tsrae~rl~lr~dnad~rl~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~l~~ 504 (651)
T 3ces_A 425 PARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKS 504 (651)
T ss_dssp CCTTTCHHHHHHHHHHHHSSCCCGGGHHHHHTTCSTTCGGGHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CChhhhhhhhHHHHHHHhcccchHHhhhhHHHHHHHhcccchhhhchHhHhHhCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCccccccccccccccccCcccCHHhhhcCCCCChhhHhcccccCCCCCccccCCc-HHHHHHHHHHhhcHHHHHHH
Q psy9395 484 TWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTSLKGINGKNLYNTEIYQ-EDIKKQLKIQLQYEGYILRQ 562 (637)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ll~r~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~veie~kY~gYi~rq 562 (637)
++++|.+.++..+.....+++....|++|||+||+|+|++|.++.|.... ++ +++.++|||++||+|||+||
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~y~~y~~~~ 577 (651)
T 3ces_A 505 TWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPA-------LTDEQAAEQVEIQVKYEGYIARQ 577 (651)
T ss_dssp CEECTTSTTHHHHHTTSSSCCSSCEEHHHHHTSTTCCHHHHTTSTTTCCC-------CSCHHHHHHHHHHHHTTC-----
T ss_pred CccCchHHHHHHHHHhcCCcccccCCHHHHhCCCCCCHHHHHhhcCCccC-------CCHHHHHHHHHHHhhHHHHHHHH
Confidence 99998766665665555566777889999999999999999998775222 67 89999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCcCccHHHHHHhhccCCCCHHHhhcCCCCCHHHHHHHHHHHhc
Q psy9395 563 INEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKS 628 (637)
Q Consensus 563 ~~~i~~~~~~e~~~iP~d~dY~~i~~LS~E~~ekL~~~rP~tlgqAsrI~GvtPa~i~~L~~~l~~ 628 (637)
+++|++++++|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||+.|++||++
T Consensus 578 ~~~~~~~~~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 643 (651)
T 3ces_A 578 QDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKK 643 (651)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHHHHHhhcCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999986
No 2
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=100.00 E-value=1.8e-146 Score=1227.59 Aligned_cols=602 Identities=50% Similarity=0.809 Sum_probs=557.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
.|||||||||+||++||++||+.|++|+|||++.+.+|.+.||++.||.+.++++++++.+++.+..+.+..+++|+.++
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 59999999999999999999999999999999755788899999999999999999999999988888999999999999
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccCCceee
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHI 165 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~~~~~i 165 (637)
..++|+++.++.++|+..+...+.+.+++++|+++++++|+++..+++++++|.+.+|..+.|+.||+|||+++++..++
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 88899988888899999999999999988779999999999998888889999999998999999999999999999999
Q ss_pred cccccCCCCccccchHHHHHHHHhcCccceecccCCCCcccccccccchhhcccCCCCCCceeeecCCCc------CCCc
Q psy9395 166 GLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNIN------LHPK 239 (637)
Q Consensus 166 g~~~~~~g~~g~~~~~~l~~~l~~~G~~~~~~~~g~~p~~~~~si~~~~~~~~~~d~~~~~~fs~~~~~~------~~~~ 239 (637)
|...++.|+.|+.++..++..|.++|+++.++++|+||++++++|||++++.+++| ..+.+|||++... ....
T Consensus 187 G~~~~~~Gr~G~~~A~~la~~L~~lG~~v~~l~tgtppRi~~~sId~~~~~~q~~d-~~~~~fs~~~~~~~~~~~~~~~~ 265 (637)
T 2zxi_A 187 GDKMIPGGRLGEPRSEGLSDFYRRFDFPLIRFKTGTPARLDKRTIDFSALEVAPGD-DPPPKFSFWTEPVGSYWFPKGKE 265 (637)
T ss_dssp TTEEEECSBTTBCCBCTHHHHHHHTTCCCEEEEEEECCEEEGGGCCCTTSEEECCC-SSCBCSCSSSSSTTCSBCCTTCC
T ss_pred cceecCCCCCCchhHHHHHHHHHhcCCceEEecCCcCceecccccCHHHhccccCC-CCCCCccccCCCcccccccCccc
Confidence 99999999999888999999999999999999999999999999999999999999 8888999987631 0357
Q ss_pred ccccccccccccccccccccccccccccccccccCCCCcccHHHHhhccCCCcccccccccCCCCCcceecCcccCCCCH
Q psy9395 240 QLSCFITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPF 319 (637)
Q Consensus 240 ~~sc~~t~t~~~~~~ii~~~~~~~~~~~g~~~~~G~r~~psie~~~~~f~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~ 319 (637)
+++|++++|+.++|++++.+++.+++|.|.+.+.|||||||||+++.+|+++..|++|||||+++++++|++|+|++||+
T Consensus 266 ql~c~~t~t~~~~~~ii~~~l~~~~~~~g~i~~~Gprycpsie~k~~rf~dk~~h~i~lepEg~~~~~~y~~G~stslp~ 345 (637)
T 2zxi_A 266 QVNCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKIVKFPDKERHQIFLEPEGLDTIEIYPNGLSTSLPE 345 (637)
T ss_dssp CCCEEEEECCHHHHHHHHHTC---------------CCCCSHHHHHHHCTTCSCCEEEEEECCSSCCEEEEETCCCCSCH
T ss_pred ceeccccCccHHHHHHHHhcchhccccCccccccCCccCcchhhhhcccCCcccceeeeccccccCceeeecCCCCcCCH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHhccCCcceEEeccccccccceeCccccCccccccCCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCC
Q psy9395 320 EAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDR 399 (637)
Q Consensus 320 ~~q~~~~~~i~gle~a~v~~~G~~~e~~~v~~~~l~~tlesk~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~ 399 (637)
++|.+++++|||||||+|+|+||+||||||||++|++|||+|.+||||||||||||+||+||+|||++||+|||++++|+
T Consensus 346 ~~Q~~~~~~ipGle~a~~~r~Gy~ieyd~i~p~~l~~tLe~k~~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa~~~~~~ 425 (637)
T 2zxi_A 346 EVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFGK 425 (637)
T ss_dssp HHHHHHHTTSTTCTTCCEEECCEEEEEEECCGGGBCTTSBBSSSBTEEECGGGGTBCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhCcCcccceEeccccccccceEchhhcCccccccCCCCEEEeeecCCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccchhhhhHHHHhhhcCCCCccccccchHHHhhhcccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Q psy9395 400 DPWIPGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQ 479 (637)
Q Consensus 400 ~~~~~~r~~~~ig~l~~~l~~~~~~epyrm~tsr~e~rl~~r~dn~~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 479 (637)
+|++|+|+++||||||||||||||+||||||||||||||+||+||||.||||+|+++|||+++||+.|++|++.++++++
T Consensus 426 ~~~~~~r~~ayig~liddl~t~g~~epyrm~tsrae~rl~lr~dnad~rl~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 505 (637)
T 2zxi_A 426 EPIYLRRDESYIGVMIDDLTTKGVTEPYRLFTSRSEYRLYIRQDNAILRLAKLGRELGLLSEEQYKLVKELEREIEKWKE 505 (637)
T ss_dssp CCCCCCTTTCHHHHHHHHHHHHCCSSCBCGGGCCCTTTTTSCSTTHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhheehhhHHHHHhhcCCCchhhhcccHHHHHHHhccCChhhhhHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeCCccccccccccccccccCcccCHHhhhcCCCCChhhHhc-ccccCCCCCccccCCcHHHHHHHHHHhhcHHH
Q psy9395 480 RLKDTWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTS-LKGINGKNLYNTEIYQEDIKKQLKIQLQYEGY 558 (637)
Q Consensus 480 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ll~r~~v~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~veie~kY~gY 558 (637)
+|++++++|. . .. + ....|++|||+ |+|+|++|.+ +.|. .. +++++.++|||++||+||
T Consensus 506 ~l~~~~~~~~-~--------~~-~-~~~~~~~~~l~-~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~y~~y 565 (637)
T 2zxi_A 506 FYKSERVSVA-V--------GG-D-TRSYSVATLMT-MNYTLDDVKEKFGYE-VP-------QHPYVKEEVEIQLKYEPY 565 (637)
T ss_dssp HHTTCEEEEE-E--------TT-E-EEEEEHHHHTT-TTCCHHHHHHHHCCC-CC-------SSHHHHHHHHHHHHHHHH
T ss_pred HHhccCccCC-C--------CC-C-CCcCCHHHHhC-CCCCHHHHHHhhCCc-cC-------CCHHHHHHHHHHhHHHHH
Confidence 9999999876 1 11 2 44679999999 9999999998 6565 22 689999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCcCccHHHHHHhhccCCCCHHHhhcCCCCCHHHHHHHHHHHhc
Q psy9395 559 ILRQINEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKS 628 (637)
Q Consensus 559 i~rq~~~i~~~~~~e~~~iP~d~dY~~i~~LS~E~~ekL~~~rP~tlgqAsrI~GvtPa~i~~L~~~l~~ 628 (637)
|+||+++|++++++|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||+.|++||++
T Consensus 566 ~~~~~~~~~~~~~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 635 (637)
T 2zxi_A 566 IERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPITVGQASRIDGITPAAITALLVYLGK 635 (637)
T ss_dssp HHHHHHHTHHHHHHHTCBCCTTCCGGGCTTCCHHHHHHHHHHCCSBHHHHTTSTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhhCCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 3
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=100.00 E-value=3e-144 Score=1213.96 Aligned_cols=615 Identities=45% Similarity=0.733 Sum_probs=567.6
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.+|||+|||||+||++||++||+.|.+|+|+|++.+.+|.+.|+++.+|++..+++++++.+++.+..+.+..+++|..+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 35999999999999999999999999999999975568889999999999999999999999998888889999999999
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccCCcee
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIH 164 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~~~~~ 164 (637)
+..++|+++.++.++|+..+...+.+.+++++|+++++++|+++..+++++.+|.+.+|..+.|+.||+|||+|+++.++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~ 179 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIH 179 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCccce
Confidence 98888988888889999999999999998878999998899999888889999999889899999999999999999999
Q ss_pred ecccccCCCCc-cccchHHHHHHHHhcCccceecccCCCCcccccccccchhhcccCCCCCCceeeecCCCcCCCccccc
Q psy9395 165 IGLKSYSAGRF-GDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSC 243 (637)
Q Consensus 165 ig~~~~~~g~~-g~~~~~~l~~~l~~~G~~~~~~~~g~~p~~~~~si~~~~~~~~~~d~~~~~~fs~~~~~~~~~~~~sc 243 (637)
+|...++.|+. |+.++..++..|..+|+++.++++|+||+++++++|++.++.+++| ..+.+|+|++...+...+++|
T Consensus 180 ~G~~~~~~g~~vG~~~a~~la~~L~~~G~kv~~l~tGtpprv~~~sid~~~~e~~~gd-~~~~~fsf~~~~~p~~~~~~C 258 (641)
T 3cp8_A 180 IGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGD-VDPVPFSFSSTSVANRNLVSC 258 (641)
T ss_dssp ETTEEEECSSSTTSCCBCSHHHHHHHTTCCEEEEEEEECCEEEGGGSCTTTSEEECCC-SSCCCSSSSCCCCGGGCCCCE
T ss_pred eeeeeeccccccCCchhhhhHHHHHhCCceEEeecCCCCcccCcccCChhhhhccccc-ccccccccccCCCCccccccc
Confidence 99988888888 8888899999999999999999999999999999999999999999 777789998653113568999
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccHHHHhhccCCCcccccccccCCCCCcceecCcccCCCCHHHHH
Q psy9395 244 FITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQI 323 (637)
Q Consensus 244 ~~t~t~~~~~~ii~~~~~~~~~~~g~~~~~G~r~~psie~~~~~f~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~ 323 (637)
++|+|++++|+||.++++.+++|.+.++|+||||||+||+++++|.++..|++|||||+++++++|++|+||+||+++|.
T Consensus 259 ~~T~T~~~~h~II~~~~~~~p~~~g~isG~G~RycPsIedki~rf~d~~~~~~~lepe~~~~~~~~~~g~st~l~~~~q~ 338 (641)
T 3cp8_A 259 YLTKTTEKTHDILRTGFDRSPLFTGKVQGVGPRYCPSIEDKISRFPDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDIQI 338 (641)
T ss_dssp EEEECCHHHHHHHHTTTTTCTTCCC---------CCCSHHHHHHCCSCSCCEEEEEESSTTCCEEEEETCCCCSCHHHHH
T ss_pred ccccCchhhhhHHhcCccccCCCCCcccCcCCccCcchhhhheeccCCCcceEEEecCCCCCCceecCCccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCcceEEeccccccccceeCccccCccccccCCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9395 324 ELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWI 403 (637)
Q Consensus 324 ~~~~~i~gle~a~v~~~G~~~e~~~v~~~~l~~tlesk~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~~~~~ 403 (637)
+++++|||||+|+|++|||++|||||+|++|++|||+|.+||||||||++|++|||||||||++||+||+++++|++|++
T Consensus 339 ~~~~~i~gle~a~~~~~G~~~~y~~i~p~~l~~tle~k~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~~~~~~~~~ 418 (641)
T 3cp8_A 339 AGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKILGKELIV 418 (641)
T ss_dssp HHHTTSTTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHhcCcchhhceEecceeeecceEECHHHcCCcccccCcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhhhhHHHHhhhcCCCCccccccchHHHhhhcccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q psy9395 404 PGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKELQRLKD 483 (637)
Q Consensus 404 ~~r~~~~ig~l~~~l~~~~~~epyrm~tsr~e~rl~~r~dn~~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 483 (637)
++|+++|||||||||||+|++||||||||||||||+||+||||.||||+|+++|||+++||+.|++|++.+++++++|++
T Consensus 419 ~~r~~~y~g~l~~~l~~~g~~epyrm~tsrae~rl~lr~dna~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~l~~ 498 (641)
T 3cp8_A 419 LGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKT 498 (641)
T ss_dssp CCTTTCHHHHHHHHHHHCCCSSCBCTTTCCCSCCGGGCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhHHHHHHHHHHhcCccchhhhccchHhhhhhhcccCcccCCCccccccCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeCCccccccccccccccccCcccCHHhhhcCCCCChhhHhcccccC----CCCCccccCC--cHHHHHHHHHHhhcHH
Q psy9395 484 TWINPSILNTGESERVLGKRIKHEYSLSNLLTWPNVNYNTLTSLKGIN----GKNLYNTEIY--QEDIKKQLKIQLQYEG 557 (637)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ll~r~~v~~~~l~~~~~~~----~~~~~~~~~~--~~~~~~~veie~kY~g 557 (637)
++++|..| +..+.....+++....|++|||+||+|+|++|.++.|.. .. + ++++++||||++||+|
T Consensus 499 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~y~~ 570 (641)
T 3cp8_A 499 AKVTPAEI-NTLLMNKGLQELKTPARALSLIKRPGISLQDILEHSLSVRSAAEE-------LCNDPRVAEQVQIEIKYEG 570 (641)
T ss_dssp CCCCHHHH-HHHHHHHTCCCCCSCCCCHHHHSSSSCCHHHHHTTCHHHHHHCCH-------HHHCHHHHHHHHHHHHTHH
T ss_pred CccChHHH-HHHHHhhcCCccccccCHHHHhCCCCCCHHHHHhhCccccccccc-------cCCCHHHHHHHHHHhhHHH
Confidence 99998844 445554455567778899999999999999999976642 12 4 6899999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCcCccHHHHHHhhccCCCCHHHhhcCCCCCHHHHHHHHHHHhc
Q psy9395 558 YILRQINEVEKNKINENLKLPHNLDYMKIQSLSIEARQKLNKYKPETIGQASRISGVTPAALTLLLIYLKS 628 (637)
Q Consensus 558 Yi~rq~~~i~~~~~~e~~~iP~d~dY~~i~~LS~E~~ekL~~~rP~tlgqAsrI~GvtPa~i~~L~~~l~~ 628 (637)
||+||+++|++++++|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||+.|++||++
T Consensus 571 y~~~~~~~~~~~~~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 641 (641)
T 3cp8_A 571 YIKREQLVADRIARLDSLHIPDNFNYDSLNSLSSEGREKLLKHRPATIGQASRILGVSPSDVSILMIRLGR 641 (641)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSSSCTTCCSSCCTTHHHHHHHHCCSSHHHHTTSTTSCHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHhhcCCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999973
No 4
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=100.00 E-value=7.7e-76 Score=614.23 Aligned_cols=359 Identities=28% Similarity=0.371 Sum_probs=313.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC---------CCCCcccccCCCCcc----chhhHHHHHHHhccHHHHH
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI---------DTIGQMSCNPSIGGI----GKSHLVKEIDAMGGIMAIA 73 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~---------~~~G~~~cn~s~gg~----~~~~l~~el~~~gg~~~~~ 73 (637)
+||+|||||+||++||++||++|++|+|+|+++ +.++++.||+|+||. +++++++|++++++.+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~~ 81 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEA 81 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhhh
Confidence 699999999999999999999999999999764 567889999999998 8899999999999999999
Q ss_pred HhhcCCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEE
Q psy9395 74 TDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVIL 153 (637)
Q Consensus 74 ~~~~gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIl 153 (637)
+|..++ |+.+. .++|+..|...+++.+++++++++.+.+|++|. ++.|||
T Consensus 82 aD~~~i----------pAg~a--l~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~------------------~~~vIi 131 (443)
T 3g5s_A 82 ADLARV----------PAGGA--LAVDREEFSGYITERLTGHPLLEVVREEVREIP------------------PGITVL 131 (443)
T ss_dssp HHHSEE----------CCTTE--EEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC------------------SSSEEE
T ss_pred hhhcCC----------CCCcc--ccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc------------------CCCEEE
Confidence 999888 66433 469999999999999999999999999998874 357999
Q ss_pred ecccccCCceeecccccCCCCccccchHHHHHHHHhc-CccceecccCCCCcccccccccchhhcccCCCCCCceeeecC
Q psy9395 154 TTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKEL-QLSHGRLKTGTPPRIDKRTIDFSKMEEQIGDFDPVPVFSVLG 232 (637)
Q Consensus 154 AtG~~~~~~~~ig~~~~~~g~~g~~~~~~l~~~l~~~-G~~~~~~~~g~~p~~~~~si~~~~~~~~~~d~~~~~~fs~~~ 232 (637)
|||++ ++..|+.+|+++ |.+..+|++|+|||++++||||++++.|+++ .. .
T Consensus 132 atG~~--------------------~s~~Ls~~L~~~tG~~~~~f~~~tpPrv~~~SId~~~~~~q~~~-~~--~----- 183 (443)
T 3g5s_A 132 ATGPL--------------------TSEALAEALKRRFGDHFLAYYDAASPIVLYESIDLTKCFRAGRY-GQ--S----- 183 (443)
T ss_dssp CCCTT--------------------CCHHHHHHHHHHHCGGGEEEEEEECCEEEGGGSCGGGCEECCCC-----------
T ss_pred eCCCC--------------------ccHHHHHHHHHhhCCCceeeccCCCCEeeCCcccHHHhhcccCC-CC--C-----
Confidence 99994 678899999986 9999999999999999999999999999886 21 1
Q ss_pred CCcCCCccccccccccccc--------ccccccccccccccccccccccCCCCcccHHH------HhhccCC--------
Q psy9395 233 NINLHPKQLSCFITHTNEK--------THNIIRSEFKNSPIFSGKIESIGPRYCPSIED------KVYRFPK-------- 290 (637)
Q Consensus 233 ~~~~~~~~~sc~~t~t~~~--------~~~ii~~~~~~~~~~~g~~~~~G~r~~psie~------~~~~f~~-------- 290 (637)
..+++|+++++..+ .+.++.++|+++++|+| |||||+ ++.||.+
T Consensus 184 -----~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~G---------CpsIE~~a~rg~k~~rF~p~kp~gl~d 249 (443)
T 3g5s_A 184 -----ADYLNCPMTEEEYRRFHQALLEAQRHTPHDWEKLEFFEA---------CVPVEELARRGYQTLLFGPMKPVGLVD 249 (443)
T ss_dssp -------CEEEEECHHHHHHHHHHHHHCCBCCCC-------CTT---------CCCHHHHHHTCTTHHHHTTTCCTTCCB
T ss_pred -----cccCCCCCChhHHHHHHHHHhccchhhhhccccCcccCC---------CcCHHHHhhcCCceeecCCCccccCCC
Confidence 12566776653221 13467889999999988 999999 6888865
Q ss_pred Cc-----ccccccccCCCCCcceecCcccCCCCHHHHHHHHHhccCCcceEEeccccccccceeC-ccccCccccccCCC
Q psy9395 291 KK-----SHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFN-PCNLKSSLETKQIH 364 (637)
Q Consensus 291 ~~-----~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~~~~~~i~gle~a~v~~~G~~~e~~~v~-~~~l~~tlesk~v~ 364 (637)
++ .|++|||||+.+++++|+|||||+||+++|.+++++|||||+|+|+|+||+||||||+ |++|++|||+|.++
T Consensus 250 ~~~~~~p~a~v~LepE~~~~~~~y~~GfsTsLp~~~Q~~~~r~IpGLE~a~~~r~G~~~ey~~i~sP~~L~~tle~k~~~ 329 (443)
T 3g5s_A 250 PRTGKEPFAVVQLRQEDKAGRMWSLVGFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAE 329 (443)
T ss_dssp TTTTBCCSEEEEEEECSTTSCEEEETTCCCCBCHHHHHHHHTTSTTCTTCCEEECCEEEEEEEECHHHHBCTTSEETTEE
T ss_pred cccCCccceEEEEeecCCCCCEEeCCceecCCCHHHHHHHHhcCcChhhCeeeeCcEeecCceecChhHhChhceecCCC
Confidence 22 2499999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchhhhhHHHHhhhcCCCCccccccchHHHhhhccccc
Q psy9395 365 GLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGRDQAYLGVLVDDLITKGIQEPYRMFTSRAEYRLNLREDN 444 (637)
Q Consensus 365 gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~~~~~~~r~~~~ig~l~~~l~~~~~~epyrm~tsr~e~rl~~r~dn 444 (637)
|||||||++|++||+||+|||++||+||+++++|++|++++|+ +|||||||||++..
T Consensus 330 ~Lf~AGqi~G~~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l~r~-~yiGvLiddl~~~~---------------------- 386 (443)
T 3g5s_A 330 GLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPPVAPPEE-SMLGGLVRYLATAN---------------------- 386 (443)
T ss_dssp EEEECGGGGTBCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCTT-SHHHHHHHHHHHSC----------------------
T ss_pred CEEECccccccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCChh-hhhhHHHHHhhcCC----------------------
Confidence 9999999999999999999999999999999999999999997 69999999999721
Q ss_pred ccccccccccccCCCCH
Q psy9395 445 ADLRLTEIGWKLGCVSY 461 (637)
Q Consensus 445 ~~~r~~~~~~~~g~~~~ 461 (637)
...|+||+.||||+++
T Consensus 387 -~~~fqpm~~nfgl~p~ 402 (443)
T 3g5s_A 387 -PEGFQPMYANWGLVPP 402 (443)
T ss_dssp -CTTCCCBCCCGGGSCC
T ss_pred -ccCCCCCCcccccCCC
Confidence 1689999999999986
No 5
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.97 E-value=9.2e-32 Score=292.15 Aligned_cols=341 Identities=16% Similarity=0.225 Sum_probs=218.6
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC------cccccCCCCccch--------hhHHHHHHHhcc-H
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG------QMSCNPSIGGIGK--------SHLVKEIDAMGG-I 69 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G------~~~cn~s~gg~~~--------~~l~~el~~~gg-~ 69 (637)
.+|||+|||||+||++||+.|++.|++|+|+|++....+ .+.||.+...... ..+...+..+.. .
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 458999999999999999999999999999999843322 3456644322211 122222333332 3
Q ss_pred HHHHHhhcCCeEeeecc-ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEE
Q psy9395 70 MAIATDKSGIQFRILNS-SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFF 147 (637)
Q Consensus 70 ~~~~~~~~gi~~~~l~~-~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~ 147 (637)
...+++..|+.+..... ..+| ......+.+.+.+.+++ .+++++ +++|+++..+++. +.|.+.+| .++
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~-------~~~~~~l~~~L~~~l~~-~Gv~i~~~~~V~~i~~~~~~-~~V~~~~g-~i~ 175 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFC-------DHSAKDIIRMLMAEMKE-AGVQLRLETSIGEVERTASG-FRVTTSAG-TVD 175 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEE-------SSCHHHHHHHHHHHHHH-HTCEEECSCCEEEEEEETTE-EEEEETTE-EEE
T ss_pred HHHHHHHcCCCcEEeeCCEEee-------CCCHHHHHHHHHHHHHH-CCCEEEECCEEEEEEEeCCE-EEEEECCc-EEE
Confidence 45677778887654321 1111 23456778888888887 578885 8999999887775 56777777 899
Q ss_pred eceEEEecccccCCceeecccccC-CCCccccchHHHHHHHHhcCccceecccCCCCc------------ccccccccch
Q psy9395 148 SKTVILTTGTFLNGKIHIGLKSYS-AGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPR------------IDKRTIDFSK 214 (637)
Q Consensus 148 a~~VIlAtG~~~~~~~~ig~~~~~-~g~~g~~~~~~l~~~l~~~G~~~~~~~~g~~p~------------~~~~si~~~~ 214 (637)
||.||+|||++ ++| .|.+|++ +.++. .+|+.+.++.+...|. +.+-+++...
T Consensus 176 ad~VIlAtG~~----------S~p~~gs~g~g--~~la~---~~G~~i~~~~p~l~~~~~~~~~~~~~~~l~G~~~~~~~ 240 (417)
T 3v76_A 176 AASLVVASGGK----------SIPKMGATGLA--YRIAE---QFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEA 240 (417)
T ss_dssp ESEEEECCCCS----------SCGGGTCCCHH--HHHHH---HTTCCEEEEEEESCCEECCHHHHHHTGGGTTCEEEEEE
T ss_pred eeEEEECCCCc----------cCCCCCCCcHH--HHHHH---HCCCCEecccceeeeEEecCccccccccCCCCceeEEE
Confidence 99999999997 344 4555544 44543 7788776554433331 2222222111
Q ss_pred hh---cccCCCCCCceeeecCCCcCCCccccccccccccccccc-ccccccccccccccccccCCCCcccHHHHhhccCC
Q psy9395 215 ME---EQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEKTHNI-IRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPK 290 (637)
Q Consensus 215 ~~---~~~~d~~~~~~fs~~~~~~~~~~~~sc~~t~t~~~~~~i-i~~~~~~~~~~~g~~~~~G~r~~psie~~~~~f~~ 290 (637)
.. ...++ ..+++++++| +.+.++||++..... -.| +.+.++...++.......+. .++...+..+.+
T Consensus 241 ~~~~~~~~~~-~lft~~G~sG---p~il~~S~~~~~~~~--~~id~~p~~~~~~~~~~~~~~~~~---~~~~~~l~~~lp 311 (417)
T 3v76_A 241 RFGKAAFREA-VLITHRGLSG---PAILQISSYWREGEE--IVLRLMPDIDIASILKGMRRANGR---QAVQTALADILP 311 (417)
T ss_dssp EETTEEEEEE-EEECSSEEES---HHHHHHTTTCCTTCC--EEEEESTTSCHHHHHHHHHHHTCS---SBHHHHHTTTSC
T ss_pred EECCEeeeee-eEEECCCcch---HHHHHHHHHhhCCCE--EEEECCCCCCHHHHHHHHHHhchh---hhHHHHHHHHhh
Confidence 00 11234 5666666664 567889998854211 111 23333322222111112222 245555555555
Q ss_pred CcccccccccCCCCCcceecCcccCCCCHHHHHHHHHhcc----------CCcceEEeccccccccceeCccccC-cccc
Q psy9395 291 KKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSID----------GMKNANIIRPGYAIEYDYFNPCNLK-SSLE 359 (637)
Q Consensus 291 ~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~~~~~~i~----------gle~a~v~~~G~~~e~~~v~~~~l~-~tle 359 (637)
++..+.+++..++ . ......++.++..+++..++ |+++|+||+|| |+.+++| +|||
T Consensus 312 ~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GG-------V~~~ei~~~tme 378 (417)
T 3v76_A 312 RRLAQFFADEAKL-T-----GRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGG-------VDTRALDSRTMQ 378 (417)
T ss_dssp HHHHHHHHHHTTC-T-----TCBGGGCCHHHHHHHHHHHHSEEECCCEECCTTTCSEEEEE-------ECGGGBCTTTCB
T ss_pred HHHHHHHHHhcCC-C-----CCchhhCCHHHHHHHHHHhcCCEEEecccCCcceEEEeCCC-------CccccCChhhcc
Confidence 5555555554343 1 12235678888888887764 78999999999 8999999 7899
Q ss_pred ccCCCCEEEEEee---cCCC-CHH--HHHHHHHHHHHHH
Q psy9395 360 TKQIHGLFFAGQI---NGTT-GYE--EAASQGLLAGLNA 392 (637)
Q Consensus 360 sk~v~gLf~aGei---~G~~-Gy~--eA~a~G~~AG~na 392 (637)
||.+||||||||+ +|.| ||| |||++|++||.++
T Consensus 379 sk~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~~ 417 (417)
T 3v76_A 379 AKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV 417 (417)
T ss_dssp BTTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCcC
Confidence 9999999999988 8888 999 9999999999863
No 6
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.96 E-value=2.7e-29 Score=271.67 Aligned_cols=343 Identities=15% Similarity=0.185 Sum_probs=217.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCC------CcccccCCCCccchh-------h-HHHHHHHhcc-HH
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTI------GQMSCNPSIGGIGKS-------H-LVKEIDAMGG-IM 70 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~------G~~~cn~s~gg~~~~-------~-l~~el~~~gg-~~ 70 (637)
+|||+|||||++|++||+.|++.|++|+|+|++.... |.+.||..+.+.... . +...+..+.. ..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 4999999999999999999999999999999974332 235676554432211 1 1112222221 23
Q ss_pred HHHHhhcCCeEeeecc-ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe----CCeEEEEEEecce
Q psy9395 71 AIATDKSGIQFRILNS-SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK----TNKILGVVTKIGI 144 (637)
Q Consensus 71 ~~~~~~~gi~~~~l~~-~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~----~~~v~gV~~~~g~ 144 (637)
..+++..|+.+..... ..+|. . +...+.+.+.+.+++ .+++++ +++|+++..+ +++ +.|.+.+|
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~------~-~~~~l~~~L~~~~~~-~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g- 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCD------E-GAEQIVEMLKSECDK-YGAKILLRSEVSQVERIQNDEKVR-FVLQVNST- 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEET------T-CTHHHHHHHHHHHHH-HTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-
T ss_pred HHHHHhCCCceEECcCCEEccC------C-CHHHHHHHHHHHHHH-CCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-
Confidence 4667778887754321 11111 1 445677788888877 678885 8899999866 454 45777666
Q ss_pred EEEeceEEEecccccCCceeecccccC-CCCccccchHHHHHHHHhcCccceecccCCCCc-----------cccccccc
Q psy9395 145 KFFSKTVILTTGTFLNGKIHIGLKSYS-AGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPR-----------IDKRTIDF 212 (637)
Q Consensus 145 ~i~a~~VIlAtG~~~~~~~~ig~~~~~-~g~~g~~~~~~l~~~l~~~G~~~~~~~~g~~p~-----------~~~~si~~ 212 (637)
+++||.||+|||++ ++| .|.+|++ +.++. .+|+++.+...+..+. +.+.+++-
T Consensus 154 ~i~ad~VVlAtG~~----------s~p~~g~~G~g--~~la~---~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~ 218 (401)
T 2gqf_A 154 QWQCKNLIVATGGL----------SMPGLGATPFG--YQIAE---QFGIPVIPPRASLVPFTYRETDKFLTALSGISLPV 218 (401)
T ss_dssp EEEESEEEECCCCS----------SCGGGTCCSHH--HHHHH---HTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEE
T ss_pred EEECCEEEECCCCc----------cCCCCCCChHH--HHHHH---HCCCCcccCcceeeceecCCchhhcccCCCeeeee
Confidence 79999999999997 333 4566654 55554 6787765443322221 11111110
Q ss_pred chhh----cccCCCCCCceeeecCCCcCCCcccccccccccccccccccccccccccccccccccCCCCcccHHHHhhcc
Q psy9395 213 SKME----EQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRF 288 (637)
Q Consensus 213 ~~~~----~~~~d~~~~~~fs~~~~~~~~~~~~sc~~t~t~~~~~~ii~~~~~~~~~~~g~~~~~G~r~~psie~~~~~f 288 (637)
.... ...++ ..+++++++| +...+++.++.....-+-+ +.+.++...+. ..+....++ .++...+.++
T Consensus 219 ~~~i~G~~~~~g~-~l~t~~g~sG---~~~l~~s~~~~~~~~~~i~-~~p~~~~~~~~-~~~~~~~~~--~~~~~~l~~~ 290 (401)
T 2gqf_A 219 TITALCGKSFYNQ-LLFTHRGISG---PAVLQISNYWQPTESVEID-LLPNHNVEEEI-NQAKQSSPK--QMLKTILVRL 290 (401)
T ss_dssp EEEETTSCEEEEE-EEECSSEEES---HHHHHHTTTCCTTCCEEEE-SCSSSCHHHHH-HHHHHHCTT--SBHHHHHTTT
T ss_pred EEEEcCCceEEeC-EEEECCCccH---HHHHHHHHHHhcCCEEEEE-CCCCCCHHHHH-HHHhhhccc--ccHHHHhhhh
Confidence 0000 01123 4455555553 3456677766441100001 22333322221 111212222 4577777777
Q ss_pred CCCcccccccccCCCCCcceecCcccCCCCHHHHHHHHHhcc----------CCcceEEeccccccccceeCccccC-cc
Q psy9395 289 PKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSID----------GMKNANIIRPGYAIEYDYFNPCNLK-SS 357 (637)
Q Consensus 289 ~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~~~~~~i~----------gle~a~v~~~G~~~e~~~v~~~~l~-~t 357 (637)
.+++..+.+++..+++. .....++.++..+++..++ ++++|+||.|| |+.+++| +|
T Consensus 291 lp~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GG-------v~~~~~~~~t 357 (401)
T 2gqf_A 291 LPKKLVELWIEQGIVQD------EVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGG-------VDTKVISSKT 357 (401)
T ss_dssp SCHHHHHHHHHTTSSCC------CBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEE-------ECGGGBCTTT
T ss_pred cCHHHHHHHHHHcCCCC------CchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEeCCc-------cccccCChhh
Confidence 77666777777666652 1235678888888887663 68999999999 9999999 89
Q ss_pred ccccCCCCEEEEEee---cCCC-CHH--HHHHHHHHHHHHHHH
Q psy9395 358 LETKQIHGLFFAGQI---NGTT-GYE--EAASQGLLAGLNAAL 394 (637)
Q Consensus 358 lesk~v~gLf~aGei---~G~~-Gy~--eA~a~G~~AG~naa~ 394 (637)
||||.+||||||||+ +|.| ||| |||++|++||.+|+.
T Consensus 358 mes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 358 MESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp CBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998 7777 999 999999999999864
No 7
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.94 E-value=1e-25 Score=247.25 Aligned_cols=353 Identities=19% Similarity=0.243 Sum_probs=201.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc-------ccccCCCCccc----------hhhHHHHHHHhc-
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ-------MSCNPSIGGIG----------KSHLVKEIDAMG- 67 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~-------~~cn~s~gg~~----------~~~l~~el~~~g- 67 (637)
+|||+|||||+||++||+.|++.|.+|+|||+... .|. ..|+....... ...+...+..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~-~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK-LGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC-CCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 48999999999999999999999999999999743 332 34554332110 001111122222
Q ss_pred cHHHHHHhhcCCeEeeecc-ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceE
Q psy9395 68 GIMAIATDKSGIQFRILNS-SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIK 145 (637)
Q Consensus 68 g~~~~~~~~~gi~~~~l~~-~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~ 145 (637)
.....|++..|+.+..... ..+|. ......+.+.|.+.+++ .+++++ +++|+++..+++++++|.+.+|.+
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~------~~~~~~l~~~L~~~~~~-~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~ 177 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPV------SNKAQSVVDALLTRLKD-LGVKIRTNTPVETIEYENGQTKAVILQTGEV 177 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEET------TCCHHHHHHHHHHHHHH-TTCEEECSCCEEEEEEETTEEEEEEETTCCE
T ss_pred HHHHHHHHhcCCceEEeeCCEEECC------CCCHHHHHHHHHHHHHH-CCCEEEeCcEEEEEEecCCcEEEEEECCCCE
Confidence 1234566677877654321 11111 11345677888888887 789985 899999988888888999988878
Q ss_pred EEeceEEEecccccCCceeecccccC-CCCccccchHHHHHHHHhcCccceecccCCCCc-----------ccccc-ccc
Q psy9395 146 FFSKTVILTTGTFLNGKIHIGLKSYS-AGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPR-----------IDKRT-IDF 212 (637)
Q Consensus 146 i~a~~VIlAtG~~~~~~~~ig~~~~~-~g~~g~~~~~~l~~~l~~~G~~~~~~~~g~~p~-----------~~~~s-i~~ 212 (637)
++||.||+|||++. ++ .|.+|++ +.++. .+|+.+........|. ..+-+ .+.
T Consensus 178 i~Ad~VVlAtGg~s----------~~~~g~tG~g--~~la~---~~G~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~ 242 (447)
T 2i0z_A 178 LETNHVVIAVGGKS----------VPQTGSTGDG--YAWAE---KAGHTITELFPTEVPILSNEPFIRDRSLQGLALRDI 242 (447)
T ss_dssp EECSCEEECCCCSS----------SGGGSCSSHH--HHHHH---HTTCCEEEEEECSCCEECCCHHHHTTTTTTCEEEEE
T ss_pred EECCEEEECCCCCc----------CCCCCCCcHH--HHHHH---HCCCCcccCcceeeeeecCCcccccccccCcccCCe
Confidence 99999999999983 23 4566664 44443 6777765433221111 00111 000
Q ss_pred ch---------hhcccCCCCCCceeeecCCCcCCCccccccccccccc-----cc-cc-ccccccccccccccccccCCC
Q psy9395 213 SK---------MEEQIGDFDPVPVFSVLGNINLHPKQLSCFITHTNEK-----TH-NI-IRSEFKNSPIFSGKIESIGPR 276 (637)
Q Consensus 213 ~~---------~~~~~~d~~~~~~fs~~~~~~~~~~~~sc~~t~t~~~-----~~-~i-i~~~~~~~~~~~g~~~~~G~r 276 (637)
.. +..+.++ ..++.|..++ +...+++.++...-+. .. .+ +.+.++...+........+.+
T Consensus 243 ~~~~~~~~g~r~~~~~ge-~~~t~~~~~g---~~~l~~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~~ 318 (447)
T 2i0z_A 243 NLSVLNPKGKAIISHKMD-MLFTHFGLSG---PAALRCSQFVVKALKKFKTNTIQMSIDALPEENSEQLFQRMLKQMKED 318 (447)
T ss_dssp EEEECC----CEEEEEEE-EEECSSEEES---HHHHHHHHHHHHHHHHHCCSCEEEEEESCTTSCHHHHHHHHHHHHTTS
T ss_pred EEEEEecCCceEecccCC-eEEECCcccH---HHHHHHHHHHHHHHhcccCCceEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 00 0000111 2223333332 2334455544321000 00 00 111221111100000000111
Q ss_pred CcccHHHHhhccCCCcccccccccCCCCCcceecCcccCCCCHHHHHHHHHhc----------cCCcceEEecccccccc
Q psy9395 277 YCPSIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSI----------DGMKNANIIRPGYAIEY 346 (637)
Q Consensus 277 ~~psie~~~~~f~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~~~~~~i----------~gle~a~v~~~G~~~e~ 346 (637)
--.++++.+....+++..+.+++..+++.+ .....+..+...++.+.+ .++..+++|.||
T Consensus 319 ~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~T~GG----- 388 (447)
T 2i0z_A 319 PKKGIKNVLKGYVPERYFLFLLEKNEIDGS-----EQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGG----- 388 (447)
T ss_dssp TTSBHHHHTTTSSCHHHHHHHHHHTTCCTT-----SBGGGSCHHHHHHHHHHHHHEEEEECEECCGGGCSSEEEE-----
T ss_pred hhhhHHHhccccChHHHHHHHHHHcCCCcC-----CchhhCCHHHHHHHHHHhhCCEEEecCCCCccEEEEeCCc-----
Confidence 012355544333333333344444444421 123455566555665543 256789999999
Q ss_pred ceeCccccC-ccccccCCCCEEEEEeecCC---C-CHH--HHHHHHHHHHHHHHHHhC
Q psy9395 347 DYFNPCNLK-SSLETKQIHGLFFAGQINGT---T-GYE--EAASQGLLAGLNAALFSQ 397 (637)
Q Consensus 347 ~~v~~~~l~-~tlesk~v~gLf~aGei~G~---~-Gy~--eA~a~G~~AG~naa~~~~ 397 (637)
|+.++++ .|||+|.|||||||||+.|. + ||| |||++|++||.+|+..++
T Consensus 389 --v~~~~i~~~t~~~~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 389 --VSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp --ECGGGEETTTTEESSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --eeeecccccccccCcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888888 79999999999999999444 4 899 999999999999998764
No 8
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.81 E-value=2.6e-19 Score=178.69 Aligned_cols=180 Identities=24% Similarity=0.383 Sum_probs=144.9
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||++|++||+.|++.|.+|+|||+.....| +.|++..++....+++++++ +
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~----------d---------- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAY----------D---------- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHC----------C----------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccccccchhhHHhhhc----------c----------
Confidence 38999999999999999999999999999999866777 88998877766555555432 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccCCceee
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHI 165 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~~~~~i 165 (637)
..+| ++..+...+.+.+++.+++++++++|+++..+++++++|.+.+|.++.||.||+|||.+++...++
T Consensus 62 -~~g~---------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 62 -PKDE---------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp -TTCC---------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEE
T ss_pred -CCCC---------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceec
Confidence 1122 556778888888887669999888999998888888888888888899999999999999999999
Q ss_pred cccccCCCCccccchHHHHHHHHhcCccceecc------cCCCCcccccccccchhhcccC
Q psy9395 166 GLKSYSAGRFGDFSTTSLAKRLKELQLSHGRLK------TGTPPRIDKRTIDFSKMEEQIG 220 (637)
Q Consensus 166 g~~~~~~g~~g~~~~~~l~~~l~~~G~~~~~~~------~g~~p~~~~~si~~~~~~~~~~ 220 (637)
|...+..|+.|..++..++..+.+.|+++.+.+ +|+|| .+++++.++.+.+
T Consensus 132 G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~----~~~~~~~~~~~~~ 188 (232)
T 2cul_A 132 GGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPG----YRVRYLAFHPEEW 188 (232)
T ss_dssp TTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CC----EEEEEEEECGGGE
T ss_pred CCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCC----ccCchhhcccCCC
Confidence 988888888888888899999999999998877 56666 3566655544443
No 9
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.80 E-value=7.7e-19 Score=195.93 Aligned_cols=353 Identities=20% Similarity=0.259 Sum_probs=187.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc-----------ccccC----CCC--ccch---hhHHHHHH--
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ-----------MSCNP----SIG--GIGK---SHLVKEID-- 64 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~-----------~~cn~----s~g--g~~~---~~l~~el~-- 64 (637)
+||+|||||++|++||+.|++.|++|+|+|+... .+. ..|++ ..+ |.+. +.+...+.
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~-~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE-VRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC-HHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc-ccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 7999999999999999999999999999999732 211 11221 111 1100 00000000
Q ss_pred -HhccHHHHHHhhcCCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec
Q psy9395 65 -AMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI 142 (637)
Q Consensus 65 -~~gg~~~~~~~~~gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~ 142 (637)
..+.....++...|.....+.... |. ........+.+.+.+.+++ .|++++ +++|+++..+++++++|.+.+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~-p~----~G~~~~~~l~~~L~~~l~~-~Gv~I~~~t~V~~I~~~~~~v~gV~l~~ 260 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSK-PH----IGTFKLVTMIEKMRATIIE-LGGEIRFSTRVDDLHMEDGQITGVTLSN 260 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSS-CC----CCHHHHHHHHHHHHHHHHH-TTCEEESSCCEEEEEESSSBEEEEEETT
T ss_pred cccHHHHHHHHHHcCCCceEeeccc-cc----cccchHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEEeCCEEEEEEECC
Confidence 000112233344454332221100 10 0011234567778888877 588885 889999998888889999999
Q ss_pred ceEEEeceEEEecccccCCceeecccccCCCCccccchHHHHHHHHhcCcccee--------------------ccc-CC
Q psy9395 143 GIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSHGR--------------------LKT-GT 201 (637)
Q Consensus 143 g~~i~a~~VIlAtG~~~~~~~~ig~~~~~~g~~g~~~~~~l~~~l~~~G~~~~~--------------------~~~-g~ 201 (637)
|.++.|+.||+|+|.+.+... ..+...|+.+.. |.. +.
T Consensus 261 G~~i~Ad~VVlA~G~~s~~~~---------------------~~l~~~Gi~~~~~~~~vgVrve~p~~~i~~~~f~~~~~ 319 (549)
T 3nlc_A 261 GEEIKSRHVVLAVGHSARDTF---------------------EMLHERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNAG 319 (549)
T ss_dssp SCEEECSCEEECCCTTCHHHH---------------------HHHHHTTCCCEECCEEEEEEEEEEHHHHHHHHTSTTTT
T ss_pred CCEEECCEEEECCCCChhhHH---------------------HHHHHcCCCcccceEEEEEEecCCchhchhhhccCcCC
Confidence 989999999999999743110 111222222110 100 10
Q ss_pred CCcccccccccchhhcccCCCCCCceeeecCCC---------c-CCCcccccccccccccccc-cc-c---c-ccccccc
Q psy9395 202 PPRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNI---------N-LHPKQLSCFITHTNEKTHN-II-R---S-EFKNSPI 265 (637)
Q Consensus 202 ~p~~~~~si~~~~~~~~~~d~~~~~~fs~~~~~---------~-~~~~~~sc~~t~t~~~~~~-ii-~---~-~~~~~~~ 265 (637)
-|.+.. -+++.++....+ .....|+..+.. + ....-.|.. .+....+.+ ++ . . +|...++
T Consensus 320 ~~~Lp~--~~~~lv~~~~~~-~~v~tFcm~pgG~vv~~~~~~~~~~~nG~s~~-~r~~~~~n~a~~v~~~~~~~~~~~pl 395 (549)
T 3nlc_A 320 HPILGA--ADYKLVHHCKNG-RTVYSFCMCPGGTVVAATSEEGRVVTNGMSQY-SRAERNANSAIVVGISPEVDYPGDPL 395 (549)
T ss_dssp CTTTCS--CCCCCEEECTTS-CEEEEEEEEEEEEEEECCCSTTCCCEEEECCT-TCCSSEEEEEEEEEECBTTTBCCSTT
T ss_pred cccCCC--CccEEEEECCCC-CeEEEEeeCCCCcEEEEEecCCeeEECCCCcc-cCCCCCcceEEEEEeecCCCCCCCCc
Confidence 011100 012222222211 112223222110 0 011112222 222222232 22 1 1 3322232
Q ss_pred ----cccccc-----ccCCCCcc---cHHHHhhccCCCcccccccccCCCCCcceecCcccCCCCHHHHHHHHHhc----
Q psy9395 266 ----FSGKIE-----SIGPRYCP---SIEDKVYRFPKKKSHHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSI---- 329 (637)
Q Consensus 266 ----~~g~~~-----~~G~r~~p---sie~~~~~f~~~~~~~~~le~~gl~~~~~~~~g~~~~l~~~~q~~~~~~i---- 329 (637)
|+..+. -.|.+|++ .++|.+..-.. ...-.++|.-- +.+.+..++..||......|...+
T Consensus 396 ~~~~~~~~~~~~a~~~gg~~~~~~~q~~~d~~~g~~s--~~~~~~~pt~~--~~~~~~~l~~~~p~~~~~~l~e~~~~~~ 471 (549)
T 3nlc_A 396 AGIRFQRELESNAYKLGGENYDAPAQKIGDFLKGRDP--SQLGDVEPSFT--PGIKLTDLSKALPPFAVEAIREAIPAFD 471 (549)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSCEEEEEHHHHHHTCTT--CCCCSSCCCCS--SCEEECCGGGTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcceEEeHHHHhCCCcC--CCCCCcCCCCC--CCcEEechhHhCcHHHHHHHHHHHHHhh
Confidence 111111 12555544 23444332111 11123444321 135577888999999888887664
Q ss_pred ---cCCcceEEeccccccccceeCc--cccCccccccCCCCEEEEEeecCCC-CHHHHHHHHHHHHHHHHHHhC
Q psy9395 330 ---DGMKNANIIRPGYAIEYDYFNP--CNLKSSLETKQIHGLFFAGQINGTT-GYEEAASQGLLAGLNAALFSQ 397 (637)
Q Consensus 330 ---~gle~a~v~~~G~~~e~~~v~~--~~l~~tlesk~v~gLf~aGei~G~~-Gy~eA~a~G~~AG~naa~~~~ 397 (637)
||+.+-+-.- |++|..+-.| ...|++|||..++|||.|||..|.+ |...|+++|+.||++++.++.
T Consensus 472 ~~~~g~~~~~~~l--~g~e~~~ssp~ri~~~~~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 472 RKIKGFASEDGLL--TGVETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp TTSTTTTCTTCEE--EEEECCSSCSEECCCTTTTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCCCCCCcEE--EEEeeccCCceeEEECCCceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 5653322222 4566666677 4667899997799999999999988 999999999999999988753
No 10
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.71 E-value=1.6e-16 Score=179.34 Aligned_cols=152 Identities=20% Similarity=0.200 Sum_probs=97.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc---------------hhhHH----------
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG---------------KSHLV---------- 60 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~---------------~~~l~---------- 60 (637)
.+||+|||||+||++||+.|++.|++|+|||+.....|... .+.+++. ...+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~--~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAK--LAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG--GCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchh--hcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999999999754333221 1112211 01111
Q ss_pred ------HHHHHhccHHHHHHhhcCCeEeeeccccC---chhhhhh-hccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEE
Q psy9395 61 ------KEIDAMGGIMAIATDKSGIQFRILNSSKG---AAVRATR-AQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLI 129 (637)
Q Consensus 61 ------~el~~~gg~~~~~~~~~gi~~~~l~~~~g---p~~~~~~-~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~ 129 (637)
+.+..-......|+...|+.+..+....+ +....+. .......+...|.+.+++ .+++++ +++|++|.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~-~gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVK-RNIDLRMNTRGIEVL 282 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHH-TTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHh-cCCEEEeCCEeeEeE
Confidence 11111111233556667877743221111 1100000 012345678888888887 689985 89999998
Q ss_pred EeC-CeEEEEEEe--cce--EEEeceEEEecccccC
Q psy9395 130 IKT-NKILGVVTK--IGI--KFFSKTVILTTGTFLN 160 (637)
Q Consensus 130 ~~~-~~v~gV~~~--~g~--~i~a~~VIlAtG~~~~ 160 (637)
.++ ++++||.+. +|. ++.|+.||+|||+|..
T Consensus 283 ~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 283 KDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred EcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 877 888888876 564 7899999999999865
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.67 E-value=1.2e-15 Score=172.01 Aligned_cols=154 Identities=18% Similarity=0.226 Sum_probs=100.0
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc---------------hhhHHHH-------
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG---------------KSHLVKE------- 62 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~---------------~~~l~~e------- 62 (637)
..+||||||||+||++||+.|++.|++|+|||+.....|... .+-+++. ...+...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~--~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSM--ISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGG--GCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCccc--ccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 358999999999999999999999999999999753333211 1112211 0111111
Q ss_pred ---------HHHhccHHHHHHhhcCCeEeeecccc---Cchhhhhh-hccCHHHHHHHHHHHHHhcCCeEEE-cceeEEE
Q psy9395 63 ---------IDAMGGIMAIATDKSGIQFRILNSSK---GAAVRATR-AQVDRILYKQAIRFYLENQLNLYLF-QEEVDDL 128 (637)
Q Consensus 63 ---------l~~~gg~~~~~~~~~gi~~~~l~~~~---gp~~~~~~-~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i 128 (637)
+.........|+...|+.+..+.... .|....+. ...+...+...|.+.+++ .+++++ +++|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~-~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKE-QGIDTRLNSRVVKL 276 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHH-TTCCEECSEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHh-cCCEEEeCCEEEEE
Confidence 11111223456667788775433211 11111000 013355678888888887 688885 8999999
Q ss_pred EEeC-CeEEEEEEe--cce--EEEeceEEEecccccCC
Q psy9395 129 IIKT-NKILGVVTK--IGI--KFFSKTVILTTGTFLNG 161 (637)
Q Consensus 129 ~~~~-~~v~gV~~~--~g~--~i~a~~VIlAtG~~~~~ 161 (637)
..++ +++++|.+. +|. .++|+.||+|||+|...
T Consensus 277 ~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp EECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred EECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 8887 888888876 564 78999999999998653
No 12
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.67 E-value=1.4e-15 Score=173.50 Aligned_cols=185 Identities=19% Similarity=0.202 Sum_probs=108.6
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc-------ccccCCCCc----cchh-hHHHHHHH---
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ-------MSCNPSIGG----IGKS-HLVKEIDA--- 65 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~-------~~cn~s~gg----~~~~-~l~~el~~--- 65 (637)
|+ +..+||||||||.||++||+.|++.|++|+|||+.....|. ..|+..... .... ++...+..
T Consensus 1 M~-~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~ 79 (660)
T 2bs2_A 1 MK-VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDW 79 (660)
T ss_dssp CC-EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTT
T ss_pred CC-cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCC
Confidence 44 34589999999999999999999999999999997422222 112211110 0000 11111111
Q ss_pred ------------hccHHHHHHhhcCCeEeeecc--------------------------ccCchhhhhhh--ccC--HHH
Q psy9395 66 ------------MGGIMAIATDKSGIQFRILNS--------------------------SKGAAVRATRA--QVD--RIL 103 (637)
Q Consensus 66 ------------~gg~~~~~~~~~gi~~~~l~~--------------------------~~gp~~~~~~~--~~d--~~~ 103 (637)
.......++...|+.|..... ........++. ..| ...
T Consensus 80 ~~d~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~ 159 (660)
T 2bs2_A 80 GCDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHT 159 (660)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHH
Confidence 111223556667777643210 00111111111 011 345
Q ss_pred HHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEecccccCCceeecccccCCCCccc
Q psy9395 104 YKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGD 177 (637)
Q Consensus 104 ~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~~~~~~~~ig~~~~~~g~~g~ 177 (637)
+...|.+.+.+ .+++++ ++.|++|..+++++.||.+. +|. .+.|+.||+|||++.+. + .....+.+.+|+
T Consensus 160 l~~~L~~~a~~-~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~--y-~~tt~~~~~tGd 235 (660)
T 2bs2_A 160 MLFAVANECLK-LGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI--Y-KNTTNAVVCEGT 235 (660)
T ss_dssp HHHHHHHHHHH-HTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG--S-SSBSSCTTCSCH
T ss_pred HHHHHHHHHHh-CCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh--c-CCCCCCCCcccH
Confidence 77777777776 588886 88999998888888888763 454 58999999999998432 2 122334566676
Q ss_pred cchHHHHHHHHhcCc-cce
Q psy9395 178 FSTTSLAKRLKELQL-SHG 195 (637)
Q Consensus 178 ~~~~~l~~~l~~~G~-~~~ 195 (637)
+ ..++. +.|. .+.
T Consensus 236 G--~~mA~---~aGa~~l~ 249 (660)
T 2bs2_A 236 G--TAIAL---ETGIAQLG 249 (660)
T ss_dssp H--HHHHH---TTSSSCEE
T ss_pred H--HHHHH---HcCCChhc
Confidence 6 33333 5565 544
No 13
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.65 E-value=1.2e-15 Score=158.24 Aligned_cols=122 Identities=20% Similarity=0.300 Sum_probs=77.5
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
|+++|||+|||||+||++||+.|++.|++|+|+|+.. ..|. |.. |.+....+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~--~~~--G~~~~~~~----------------------- 52 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGV--AAG--GQLTTTTI----------------------- 52 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGC--CTT--CGGGGSSE-----------------------
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCc--ccC--CCcCChHH-----------------------
Confidence 3456999999999999999999999999999999862 2221 210 11100000
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccC
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~ 160 (637)
+. ..|.+ ...++...+...+.+.+.+ .++.+....|......... ..+.+.++..+.+|.+|+|||+..+
T Consensus 53 -i~--~~~g~---~~~i~~~~l~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 53 -IE--NFPGF---PNGIDGNELMMNMRTQSEK-YGTTIITETIDHVDFSTQP-FKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp -EC--CSTTC---TTCEEHHHHHHHHHHHHHH-TTCEEECCCEEEEECSSSS-EEEEETTCCEEEEEEEEECCCEEEC
T ss_pred -hh--hccCC---cccCCHHHHHHHHHHHHhh-cCcEEEEeEEEEeecCCCc-eEEEECCCeEEEEeEEEEccccccc
Confidence 00 00110 1123334555666666665 6777777777776554443 3456677789999999999998543
No 14
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.64 E-value=5e-15 Score=164.85 Aligned_cols=154 Identities=23% Similarity=0.244 Sum_probs=95.8
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCcc----------------chhhHHHHHHH--
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI----------------GKSHLVKEIDA-- 65 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~----------------~~~~l~~el~~-- 65 (637)
+..|||||||||+||++||+.|++.|++|+|||+.....|... .+.|+. ....+.+.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~--~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~ 116 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA--LAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAAL 116 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG--GSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch--hcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHh
Confidence 3459999999999999999999999999999999854333321 111111 01111111111
Q ss_pred --------------hccHHHHHHhhcCCeEeeecc--------------ccC-chhh--------hhhh-----------
Q psy9395 66 --------------MGGIMAIATDKSGIQFRILNS--------------SKG-AAVR--------ATRA----------- 97 (637)
Q Consensus 66 --------------~gg~~~~~~~~~gi~~~~l~~--------------~~g-p~~~--------~~~~----------- 97 (637)
.......|....|+.|..... ..+ ...+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g 196 (510)
T 4at0_A 117 GPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTG 196 (510)
T ss_dssp CSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTT
T ss_pred CCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccc
Confidence 112233566667776643200 000 0000 0000
Q ss_pred ccCH-HHHHHHHHHHHHhcCCeEEE-cceeEEEEEe-CCeEEEEEEecc---eEEEec-eEEEecccccC
Q psy9395 98 QVDR-ILYKQAIRFYLENQLNLYLF-QEEVDDLIIK-TNKILGVVTKIG---IKFFSK-TVILTTGTFLN 160 (637)
Q Consensus 98 ~~d~-~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~-~~~v~gV~~~~g---~~i~a~-~VIlAtG~~~~ 160 (637)
.... ..+...|.+.+++ .|++++ +++|++|..+ +++++||.+.++ .+++|+ .||+|||+|..
T Consensus 197 ~~~g~~~l~~~L~~~~~~-~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 197 EKGGGYMLMKPLVETAEK-LGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp TBCTTHHHHHHHHHHHHH-TTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred cCCCHHHHHHHHHHHHHH-cCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 0111 2677888888887 589985 8999999988 688999887643 368995 99999999964
No 15
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.64 E-value=6.8e-15 Score=152.36 Aligned_cols=111 Identities=23% Similarity=0.329 Sum_probs=78.5
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||+.|+|.|++|+|+|++ ...|....+ .. ++
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~-~~--------------------------~~------ 51 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQN-SH--------------------------GF------ 51 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSC-BC--------------------------CS------
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeee-cC--------------------------Cc------
Confidence 499999999999999999999999999999986 222221111 00 00
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. ...+....+.+...+.+.+++++.++...+..+...+...+.|.+.+|.++.+|+||+|||+.
T Consensus 52 ----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 52 ----IT----RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp ----TT----CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred ----cC----CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 00 001233445555566666667788888878777655554566888889999999999999985
No 16
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.63 E-value=2.4e-15 Score=168.38 Aligned_cols=180 Identities=19% Similarity=0.181 Sum_probs=96.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccch--------h-hHHHHHH-----------
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGK--------S-HLVKEID----------- 64 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~--------~-~l~~el~----------- 64 (637)
..+||+|||||+||++||+.|++ |++|+|||+.....|. ...+.||+.. . ++...+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~--s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v 83 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS--TFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAV 83 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---------------CCSHHHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC--hhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHH
Confidence 35899999999999999999999 9999999997432222 1122233211 0 1111111
Q ss_pred ----HhccHHHHHHhhcCCeEeeec----c-----ccCchhhhhhh----ccCHHHHHHHHHHHHHhcCCeEEE-cceeE
Q psy9395 65 ----AMGGIMAIATDKSGIQFRILN----S-----SKGAAVRATRA----QVDRILYKQAIRFYLENQLNLYLF-QEEVD 126 (637)
Q Consensus 65 ----~~gg~~~~~~~~~gi~~~~l~----~-----~~gp~~~~~~~----~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~ 126 (637)
........++...|+.|.... . ...+.....+. ......+...|.+.++++++++++ ++.|+
T Consensus 84 ~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~ 163 (540)
T 1chu_A 84 EFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAV 163 (540)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEE
Confidence 111123355667788775432 0 00000000011 011234556666777765789996 88999
Q ss_pred EEEE-eCC------eEEEEEEe---cce--EEEeceEEEecccccCCceeecccccCCCCccccchHHHHHHHHhcCccc
Q psy9395 127 DLII-KTN------KILGVVTK---IGI--KFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSH 194 (637)
Q Consensus 127 ~i~~-~~~------~v~gV~~~---~g~--~i~a~~VIlAtG~~~~~~~~ig~~~~~~g~~g~~~~~~l~~~l~~~G~~~ 194 (637)
+|.. +++ ++.||.+. +|. .+.|+.||+|||++... + .....+.+.+|++ +.++. +.|..+
T Consensus 164 ~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~--~-~~~~~~~~~tGdG--~~ma~---~aGa~l 235 (540)
T 1chu_A 164 DLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV--Y-QYTTNPDISSGDG--IAMAW---RAGCRV 235 (540)
T ss_dssp EEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG--S-SSBSCGGGCSCHH--HHHHH---HTTCCE
T ss_pred EEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc--c-CCCcCCCCCchHH--HHHHH---HcCCCC
Confidence 9987 446 78888875 464 79999999999998432 1 1122344566666 33433 455544
Q ss_pred e
Q psy9395 195 G 195 (637)
Q Consensus 195 ~ 195 (637)
.
T Consensus 236 ~ 236 (540)
T 1chu_A 236 A 236 (540)
T ss_dssp E
T ss_pred c
Confidence 4
No 17
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.63 E-value=4.1e-15 Score=167.82 Aligned_cols=153 Identities=19% Similarity=0.218 Sum_probs=97.9
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCcc---------------chhhHHHHH-------
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI---------------GKSHLVKEI------- 63 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~---------------~~~~l~~el------- 63 (637)
.+||+|||||+||++||+.|++.|++|+|+|+.....|... .+.|++ ....+...+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~--~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTK--LAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGG--GCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchh--hhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999999754333221 111111 011122211
Q ss_pred ---------HHhccHHHHHHhhcCCeEeeeccccCchh---hhhh-hccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEE
Q psy9395 64 ---------DAMGGIMAIATDKSGIQFRILNSSKGAAV---RATR-AQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLI 129 (637)
Q Consensus 64 ---------~~~gg~~~~~~~~~gi~~~~l~~~~gp~~---~~~~-~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~ 129 (637)
.........|+...|+.+..+....+..+ ..+. .......+...|.+.+++ .+++++ +++|++|.
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~-~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVK-RGTDIRLNSRVVRIL 282 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHH-TTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHH-cCCeEEecCEEEEEE
Confidence 11112234566667887754322111111 0000 012245677888888887 689986 89999998
Q ss_pred EeC-CeEEEEEEe--cce--EEEeceEEEecccccCC
Q psy9395 130 IKT-NKILGVVTK--IGI--KFFSKTVILTTGTFLNG 161 (637)
Q Consensus 130 ~~~-~~v~gV~~~--~g~--~i~a~~VIlAtG~~~~~ 161 (637)
.++ ++++||.+. +|. .+.|+.||+|||++...
T Consensus 283 ~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 283 EDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp EC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred ECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 777 888888876 563 68999999999998653
No 18
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.62 E-value=1.4e-14 Score=150.32 Aligned_cols=44 Identities=25% Similarity=0.392 Sum_probs=36.5
Q ss_pred ccCccccccCCCCEEEEEeecCCC--CHHHHHHHHHHHHHHHHHHhC
Q psy9395 353 NLKSSLETKQIHGLFFAGQINGTT--GYEEAASQGLLAGLNAALFSQ 397 (637)
Q Consensus 353 ~l~~tlesk~v~gLf~aGei~G~~--Gy~eA~a~G~~AG~naa~~~~ 397 (637)
.+|++|||. +||+|+|||+++.. -...|+.+|.+||.||++++.
T Consensus 261 ~vd~~~~Ts-~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 261 VTKDDMTTS-VPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp CCCTTSBCS-STTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCccC-CCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 456789986 99999999997642 345899999999999998764
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.62 E-value=4e-15 Score=168.23 Aligned_cols=186 Identities=19% Similarity=0.201 Sum_probs=109.2
Q ss_pred CCCC-CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc-------ccccCCCCcc-chh-hHHHHHHH-----
Q psy9395 1 MLFK-SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ-------MSCNPSIGGI-GKS-HLVKEIDA----- 65 (637)
Q Consensus 1 M~~~-~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~-------~~cn~s~gg~-~~~-~l~~el~~----- 65 (637)
|.+. ..+||+|||||+||++||+.|++.|++|+|||+.....|. ..|+...... ... ++...+..
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 5544 3589999999999999999999999999999997432222 1122111000 001 11111111
Q ss_pred ----------hccHHHHHHhhcCCeEeeecc-cc----Cchhh-------hhhh----ccCHHHHHHHHHHHHHhcCCeE
Q psy9395 66 ----------MGGIMAIATDKSGIQFRILNS-SK----GAAVR-------ATRA----QVDRILYKQAIRFYLENQLNLY 119 (637)
Q Consensus 66 ----------~gg~~~~~~~~~gi~~~~l~~-~~----gp~~~-------~~~~----~~d~~~~~~~l~~~l~~~~gv~ 119 (637)
.......++...|+.|..... .. .+... ..+. ......+...|.+.+.+ .|++
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~ 159 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK-NHTT 159 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHH-TTCE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHh-CCCE
Confidence 011223455667887754321 00 01000 0011 01124677778888877 5899
Q ss_pred EE-cceeEEEEEe-CCeEEEEEEe---cce--EEEeceEEEecccccCCceeecccccCCCCccccchHHHHHHHHhcCc
Q psy9395 120 LF-QEEVDDLIIK-TNKILGVVTK---IGI--KFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQL 192 (637)
Q Consensus 120 i~-~~~V~~i~~~-~~~v~gV~~~---~g~--~i~a~~VIlAtG~~~~~~~~ig~~~~~~g~~g~~~~~~l~~~l~~~G~ 192 (637)
++ ++.|++|..+ ++++.||... +|. .+.|+.||+|||++... + .....+.+.+|++ +.++. +.|.
T Consensus 160 i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~--y-~~~~~~~~~tGdG--~~ma~---~aGa 231 (588)
T 2wdq_A 160 IFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI--Y-QSTTNAHINTGDG--VGMAI---RAGV 231 (588)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG--S-SSBSSCTTCCCHH--HHHHH---HTTC
T ss_pred EEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc--c-CCcCCCCCchHHH--HHHHH---HcCC
Confidence 85 8999999886 6788888763 453 68999999999998442 1 1123345566766 44433 5555
Q ss_pred cce
Q psy9395 193 SHG 195 (637)
Q Consensus 193 ~~~ 195 (637)
.+.
T Consensus 232 ~l~ 234 (588)
T 2wdq_A 232 PVQ 234 (588)
T ss_dssp CEE
T ss_pred CEe
Confidence 443
No 20
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.61 E-value=8.1e-15 Score=166.16 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=108.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc----------hh-hHHHHHHH---------
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG----------KS-HLVKEIDA--------- 65 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~----------~~-~l~~el~~--------- 65 (637)
.+||||||||+||++||+.|++.|++|+|||+.....+. +..+.||+. .. ++...+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~--s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH--TVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG--GGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC--chhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 489999999999999999999999999999997422222 111222221 00 11111111
Q ss_pred ------hccHHHHHHhhcCCeEeeecc-----ccCchhhhh--------hhc--c--CHHHHHHHHHHHHHhcCCeEEE-
Q psy9395 66 ------MGGIMAIATDKSGIQFRILNS-----SKGAAVRAT--------RAQ--V--DRILYKQAIRFYLENQLNLYLF- 121 (637)
Q Consensus 66 ------~gg~~~~~~~~~gi~~~~l~~-----~~gp~~~~~--------~~~--~--d~~~~~~~l~~~l~~~~gv~i~- 121 (637)
.......++...|+.|..... ...+..... +.. . ....+...|.+.+.+ .+++++
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~-~gv~i~~ 174 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLR-YDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTT-SCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHh-CCCEEEE
Confidence 111223556677887754321 001110000 110 1 134677788888776 789985
Q ss_pred cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEecccccCCceeecccccCCCCccccchHHHHHHHHhcCccce
Q psy9395 122 QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLKELQLSHG 195 (637)
Q Consensus 122 ~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~~~~~~~~ig~~~~~~g~~g~~~~~~l~~~l~~~G~~~~ 195 (637)
++.|++|..+++++.||.+. +|. .+.|+.||+|||++.+. +.. ...+.+.+|++ +.++. +.|..+.
T Consensus 175 ~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~--y~~-~t~~~~~tGdG--~~mA~---raGa~l~ 245 (621)
T 2h88_A 175 EYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT--YFS-CTSAHTSTGDG--TAMVT---RAGLPCQ 245 (621)
T ss_dssp TEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG--SSS-BSSCTTCCCHH--HHHHH---HTTCCEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc--cCC-cCCCCCCChHH--HHHHH---HcCCCcc
Confidence 88999999888899998874 453 78999999999998432 211 23345566766 33433 5555443
No 21
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.60 E-value=9.4e-15 Score=165.54 Aligned_cols=154 Identities=17% Similarity=0.190 Sum_probs=96.1
Q ss_pred CcccEEEECcchHHHHHHHHHhhCC--CcEEEEccCCCCCCcccccCCCCccch---------hhHHHHHHH--------
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMG--QKTLLLSHNIDTIGQMSCNPSIGGIGK---------SHLVKEIDA-------- 65 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~~~~~G~~~cn~s~gg~~~---------~~l~~el~~-------- 65 (637)
..|||+|||||+||++||+.|++.| .+|+|||+.....+. +..+.||+.. .++...+..
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~--s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~ 81 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH--TVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQD 81 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG--GGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh--HHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHH
Confidence 3589999999999999999999999 999999997432221 1122233210 111111111
Q ss_pred -------hccHHHHHHhhcCCeEeeecc-----ccCchhhhhhhc----cCHHHHHHHHHHHHHhcCCeEEE-cceeEEE
Q psy9395 66 -------MGGIMAIATDKSGIQFRILNS-----SKGAAVRATRAQ----VDRILYKQAIRFYLENQLNLYLF-QEEVDDL 128 (637)
Q Consensus 66 -------~gg~~~~~~~~~gi~~~~l~~-----~~gp~~~~~~~~----~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i 128 (637)
.......+....|+.|..... ...+.....+.. .....+...|.+.+.+.++++++ ++.|+++
T Consensus 82 ~v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l 161 (602)
T 1kf6_A 82 VVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI 161 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEE
Confidence 111223455667887754321 001110011110 11346777788888775559985 8999999
Q ss_pred EEeCCeEEEEEE---ecce--EEEeceEEEecccccC
Q psy9395 129 IIKTNKILGVVT---KIGI--KFFSKTVILTTGTFLN 160 (637)
Q Consensus 129 ~~~~~~v~gV~~---~~g~--~i~a~~VIlAtG~~~~ 160 (637)
..+++++.||.. .+|. .+.|+.||+|||++..
T Consensus 162 ~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 162 LVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp EEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred EEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 988888888865 3565 7999999999999844
No 22
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.55 E-value=2.2e-14 Score=163.72 Aligned_cols=152 Identities=20% Similarity=0.260 Sum_probs=94.7
Q ss_pred cccEEEECcchHHHHHHHHHhhC------CCcEEEEccCCCCCCcccccCCCC--ccc-------hhhHHH---------
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM------GQKTLLLSHNIDTIGQMSCNPSIG--GIG-------KSHLVK--------- 61 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~------G~~V~LiE~~~~~~G~~~cn~s~g--g~~-------~~~l~~--------- 61 (637)
.|||||||||.||++||+.|++. |++|+|||+... +..++ .+.| |+. ....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~--~~s~s-~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl 98 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL--ERSGA-VAQGLSAINTYLGDNNADDYVRMVRTDLMGL 98 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT--TTCST-TTTCEEEECCCCTTSCHHHHHHHHHHHTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC--CCCcc-cccCcchheeecCCCCHHHHHHHHHHhcCCC
Confidence 48999999999999999999997 999999999632 22222 2334 321 111111
Q ss_pred -------HHHHhccHHHHHHhhcCCeEeee-c-ccc----------------Cchhhhhh--hccCHHHHHHHHHHHHHh
Q psy9395 62 -------EIDAMGGIMAIATDKSGIQFRIL-N-SSK----------------GAAVRATR--AQVDRILYKQAIRFYLEN 114 (637)
Q Consensus 62 -------el~~~gg~~~~~~~~~gi~~~~l-~-~~~----------------gp~~~~~~--~~~d~~~~~~~l~~~l~~ 114 (637)
.+.........+....|+.|... . +.. +....... .......+...|.+.+++
T Consensus 99 ~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~ 178 (662)
T 3gyx_A 99 VREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKN 178 (662)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHh
Confidence 11111112235666788888553 1 110 00000000 012223466677777776
Q ss_pred c-CCeEEE-cceeEEEEEeCC---eEEEEEEe---cc--eEEEeceEEEecccccC
Q psy9395 115 Q-LNLYLF-QEEVDDLIIKTN---KILGVVTK---IG--IKFFSKTVILTTGTFLN 160 (637)
Q Consensus 115 ~-~gv~i~-~~~V~~i~~~~~---~v~gV~~~---~g--~~i~a~~VIlAtG~~~~ 160 (637)
. ++++++ ++.|++|..+++ ++.||... +| ..+.|+.||+|||++.+
T Consensus 179 ~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 179 ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp HHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred cCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 4 388886 789999988876 89998763 34 46899999999999843
No 23
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.51 E-value=5.7e-13 Score=152.19 Aligned_cols=152 Identities=20% Similarity=0.178 Sum_probs=91.9
Q ss_pred cccEEEECcchHHHHHHHHHh---h-CCCcEEEEccCCCCCCcc-------cccCCCCc-------cchhhHHHHHHH--
Q psy9395 6 KFDVIVVGGGHAGTEAALVSA---R-MGQKTLLLSHNIDTIGQM-------SCNPSIGG-------IGKSHLVKEIDA-- 65 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA---~-~G~~V~LiE~~~~~~G~~-------~cn~s~gg-------~~~~~l~~el~~-- 65 (637)
.|||||||||+||++||+.|+ + .|++|+|||+... .+.. .|+...+. .....+++....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~-~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV-ERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT-TTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC-CCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 489999999999999999999 6 8999999999742 2111 12211110 111111221111
Q ss_pred --------------hccHHHHHHhhcCCeEeeec-cccCchhhhh-hhccCHHHHHHHHHHHHHhcCCe-EEE-cceeEE
Q psy9395 66 --------------MGGIMAIATDKSGIQFRILN-SSKGAAVRAT-RAQVDRILYKQAIRFYLENQLNL-YLF-QEEVDD 127 (637)
Q Consensus 66 --------------~gg~~~~~~~~~gi~~~~l~-~~~gp~~~~~-~~~~d~~~~~~~l~~~l~~~~gv-~i~-~~~V~~ 127 (637)
.......++...|+.|.... +...+. +. ...++...+...+.+.+++.+|+ +++ ++.|++
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~--~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~ 178 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVRE--GQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFE 178 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBS--SSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEE
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCC--CccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEE
Confidence 01112355667788774321 111110 00 00112223556666666664488 785 889999
Q ss_pred EEEeCC---eEEEEEE---ecce--EEEeceEEEecccccC
Q psy9395 128 LIIKTN---KILGVVT---KIGI--KFFSKTVILTTGTFLN 160 (637)
Q Consensus 128 i~~~~~---~v~gV~~---~~g~--~i~a~~VIlAtG~~~~ 160 (637)
|..+++ ++.||.. .+|. .+.|+.||+|||++..
T Consensus 179 L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 179 LLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred EEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 988777 8998875 3453 6899999999999854
No 24
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.51 E-value=8.2e-13 Score=135.16 Aligned_cols=109 Identities=22% Similarity=0.193 Sum_probs=81.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
|||+|||||+||++||..|++.|++|+|+|++. ..+... ... .+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~~~~~~--~~~-------------------------~~-------- 46 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGE-RRNRFA--SHS-------------------------HG-------- 46 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC-CGGGGC--SCC-------------------------CS--------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC-cccccc--hhh-------------------------cC--------
Confidence 899999999999999999999999999999862 111100 000 00
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+. ....+...+...+.+.+.+.+++.++.++|+++..+++. +.|.+.+|.++.+|.||+|||..
T Consensus 47 --~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 47 --FLG----QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE-FIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp --STT----CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCCE
T ss_pred --CcC----CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe-EEEEECCCCEEEcCEEEECCCCC
Confidence 011 012445567777888888767899988899999877765 55778888889999999999985
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.49 E-value=6.9e-13 Score=137.27 Aligned_cols=111 Identities=29% Similarity=0.335 Sum_probs=77.4
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
++||+|||||+||++||+.|++.|++|+|+|++ ..|... .. .. .
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~--~~---------------------------~~-~---- 58 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT--EA---------------------------GI-V---- 58 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG--GC---------------------------CE-E----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec--cc---------------------------cc-c----
Confidence 489999999999999999999999999999985 222211 00 00 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
...|.. .......+...+.+.+.+ .++++..++|+++..+++. +.|.+.+|..+.+|.||+|||+..
T Consensus 59 -~~~~~~----~~~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 59 -DDYLGL----IEIQASDMIKVFNKHIEK-YEVPVLLDIVEKIENRGDE-FVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp -CCSTTS----TTEEHHHHHHHHHHHHHT-TTCCEEESCEEEEEEC--C-EEEEESSSCEEEEEEEEECCCCEE
T ss_pred -cccCCC----CCCCHHHHHHHHHHHHHH-cCCEEEEEEEEEEEecCCE-EEEEECCCCEEEcCEEEECcCCCC
Confidence 000111 013345566777777776 6788855899999876554 457777778999999999999963
No 26
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.47 E-value=3.5e-13 Score=148.43 Aligned_cols=146 Identities=21% Similarity=0.266 Sum_probs=90.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc--------h-hhHHHHHHH-------------
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG--------K-SHLVKEIDA------------- 65 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~--------~-~~l~~el~~------------- 65 (637)
||+|||||+||++||+.|++.|++|+|+|+. ...|... .+.||+. . .++...+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~--~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~ 77 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTP--IAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYV 77 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGG--GCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHH--HHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 8999999999999999999999999999997 3333321 1222221 1 111111111
Q ss_pred --hccHHHHHHhhcCCeEee-eccccCchhhhhhh----ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEE
Q psy9395 66 --MGGIMAIATDKSGIQFRI-LNSSKGAAVRATRA----QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILG 137 (637)
Q Consensus 66 --~gg~~~~~~~~~gi~~~~-l~~~~gp~~~~~~~----~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~g 137 (637)
.......+....|+.|.. +....+.. .++. ......+...+.+.+++ .+++++ ++.| ++..+++++.+
T Consensus 78 ~~~~~~~i~~l~~~Gv~~~~~~~~~~g~~--~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~i~~~~~v-~l~~~~~~v~G 153 (472)
T 2e5v_A 78 TSEAKNVIETFESWGFEFEEDLRLEGGHT--KRRVLHRTDETGREIFNFLLKLARE-EGIPIIEDRLV-EIRVKDGKVTG 153 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCSSCBCCTTCS--SCCEECSSSCHHHHHHHHHHHHHHH-TTCCEECCCEE-EEEEETTEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCcccccccCcC--cCcEEEeCCCCHHHHHHHHHHHHHh-CCCEEEECcEE-EEEEeCCEEEE
Confidence 011223455567777643 11111110 0111 12234567777777754 789986 7789 99888888888
Q ss_pred EEEec-ceEEEeceEEEecccccC
Q psy9395 138 VVTKI-GIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 138 V~~~~-g~~i~a~~VIlAtG~~~~ 160 (637)
+...+ +..+.|+.||+|||++..
T Consensus 154 v~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 154 FVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp EEETTTEEECCCSEEEECCCCCGG
T ss_pred EEEEeCCCeEEeeeEEECCCCCcc
Confidence 87642 335789999999999743
No 27
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.45 E-value=1.6e-12 Score=135.35 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=78.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.++||+|||||+||++||+.|++.|++|+|+|+. ...|. |..+.. +
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~--~~~~~~--------------------------~----- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQ--IAWSEE--------------------------V----- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGG--GGGCSC--------------------------B-----
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcc--cccccc--------------------------c-----
Confidence 4589999999999999999999999999999996 32222 111100 0
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEe--CCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIK--TNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~--~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
...|.+ ...++...+...+.+.+++ .+++++.++|+++..+ ++..+.|.+.+|..+.+|.||+|||...
T Consensus 53 --~~~~~~---~~~~~~~~~~~~l~~~~~~-~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 53 --ENFPGF---PEPIAGMELAQRMHQQAEK-FGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp --CCSTTC---SSCBCHHHHHHHHHHHHHH-TTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred --ccCCCC---CCCCCHHHHHHHHHHHHHH-cCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 000110 0123445566667777776 6788876789998766 4322346667788999999999999853
No 28
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.43 E-value=1.1e-12 Score=136.34 Aligned_cols=115 Identities=17% Similarity=0.305 Sum_probs=79.2
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.++||+|||||+||++||+.|++.|++|+|+|+... .| |. +.... ..... .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-~g---------G~---------------~~~~~--~~~~~--~ 56 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ-LG---------GQ---------------LSALY--PEKYI--Y 56 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SC---------HH---------------HHHHC--TTSEE--C
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC-CC---------ce---------------ehhcC--CCceE--e
Confidence 358999999999999999999999999999999732 22 11 00000 00000 0
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGT 157 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~ 157 (637)
+ .|.. .......+...+.+.+.+ .++.+. +++|+++..+++..+.|.+.+|. +.+|.||+|||.
T Consensus 57 ~---~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 57 D---VAGF----PKIRAQELINNLKEQMAK-FDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp C---STTC----SSEEHHHHHHHHHHHHTT-SCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred c---cCCC----CCCCHHHHHHHHHHHHHH-hCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 0 0110 013345677778887776 578885 89999998776534557777775 999999999998
No 29
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.43 E-value=1.2e-11 Score=128.40 Aligned_cols=113 Identities=23% Similarity=0.210 Sum_probs=77.2
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
+..+||+|||||+||++||+.|++.|++|+|+|+. ...|. |..+. .+.
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~--~~~~~--------------------------~~~--- 61 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGL--TAEAP--------------------------LVE--- 61 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGG--GGGCS--------------------------CBC---
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCcc--ccccc--------------------------hhh---
Confidence 34589999999999999999999999999999984 22222 11100 000
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
..|.+ ..++...+...+.+.+.+ .+++++.++|+++..+++.+ .|.+ ++..+.+|.||+|||.+.
T Consensus 62 ----~~~~~----~~~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i~~~~~~~-~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 62 ----NYLGF----KSIVGSELAKLFADHAAN-YAKIREGVEVRSIKKTQGGF-DIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp ----CBTTB----SSBCHHHHHHHHHHHHHT-TSEEEETCCEEEEEEETTEE-EEEE-SSSEEEEEEEEECCCEEE
T ss_pred ----hcCCC----cccCHHHHHHHHHHHHHH-cCCEEEEeeEEEEEEeCCEE-EEEE-CCCEEEeCEEEECCCCCc
Confidence 00111 123344556666666766 67888778899998776643 3555 566899999999999863
No 30
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.42 E-value=5.2e-12 Score=130.52 Aligned_cols=114 Identities=24% Similarity=0.276 Sum_probs=80.3
Q ss_pred cccEEEECcchHHHHHHHHHhhCCC-cEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+|||+|||||+||++||+.|++.|+ +|+|+|++ ...|. |..+. .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~--~~~~~--------------------------~~----- 46 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQ--ITGSS--------------------------EI----- 46 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCG--GGGCS--------------------------CB-----
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcc--ccccc--------------------------cc-----
Confidence 3899999999999999999999999 99999985 22221 11110 00
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccC
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~ 160 (637)
...|. ....+++..+...+.+.+.+ .+++++.++|+++..+++. +.|.+.+|..+.+|.||+|||+++.
T Consensus 47 --~~~~~---~~~~~~~~~~~~~l~~~~~~-~~v~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 47 --ENYPG---VKEVVSGLDFMQPWQEQCFR-FGLKHEMTAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp --CCSTT---CCSCBCHHHHHHHHHHHHHT-TSCEEECSCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCEEEC
T ss_pred --ccCCC---CcccCCHHHHHHHHHHHHHH-cCCEEEEEEEEEEEEcCCE-EEEEEcCCCEEECCEEEECCCCCCC
Confidence 00011 01124556677777777776 6888876889999877664 3466677888999999999998643
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.42 E-value=2.5e-12 Score=139.81 Aligned_cols=159 Identities=18% Similarity=0.158 Sum_probs=99.2
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCC-cEEEEccCCCCCCcccccCCC-------Cccchh------hHHHH-HHH
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNIDTIGQMSCNPSI-------GGIGKS------HLVKE-IDA 65 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~~~~G~~~cn~s~-------gg~~~~------~l~~e-l~~ 65 (637)
|+|+..+||||||||++|++||+.|+++|+ +|+|||++....+....+... ...... .+..+ ++.
T Consensus 1 M~~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (438)
T 3dje_A 1 MAVTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNG 80 (438)
T ss_dssp -CCCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHH
Confidence 777777999999999999999999999999 999999974322221111100 000000 11111 111
Q ss_pred hc------------c---------H---HHHHHh-hcCCeE-eeecc----ccCch------------hhh-hh-hccCH
Q psy9395 66 MG------------G---------I---MAIATD-KSGIQF-RILNS----SKGAA------------VRA-TR-AQVDR 101 (637)
Q Consensus 66 ~g------------g---------~---~~~~~~-~~gi~~-~~l~~----~~gp~------------~~~-~~-~~~d~ 101 (637)
+. + . +..... ..+..+ +.++. ...|. ++. .. ..+++
T Consensus 81 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~ 160 (438)
T 3dje_A 81 WKNDPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHA 160 (438)
T ss_dssp HHHCTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECH
T ss_pred HhhCccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecH
Confidence 10 0 0 000000 123333 22221 11221 111 12 35677
Q ss_pred HHHHHHHHHHHHhcCCeEEE-cc---eeEEEEEeCCeEEEEEEecceEEEeceEEEecccccC
Q psy9395 102 ILYKQAIRFYLENQLNLYLF-QE---EVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 102 ~~~~~~l~~~l~~~~gv~i~-~~---~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~ 160 (637)
..+...+.+.+++ .|++++ ++ +|++|..+++++.+|.+.+|.+++||.||+|||+|..
T Consensus 161 ~~~~~~L~~~a~~-~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 161 RNALVAAAREAQR-MGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHH-TTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHh-cCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 7888899998887 678885 77 9999998888999999999989999999999999843
No 32
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.40 E-value=6.9e-12 Score=131.50 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=81.4
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||++|++||+.|++.|++|+|+|+.....|.. .....+... ... .......+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~--~~~~~~~~~---------~~~--~~~~~~~~~------ 63 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW--QHAWHSLHL---------FSP--AGWSSIPGW------ 63 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG--GGSCTTCBC---------SSC--GGGSCCSSS------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc--cCCCCCcEe---------cCc--hhhhhCCCC------
Confidence 3899999999999999999999999999999974332221 110000000 000 000000000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
..+. .......+..+...+.+.+++ .++.+. +++|+++..+++.+.+|.+.+| ++.+|.||+|||.+.
T Consensus 64 --~~~~--~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 64 --PMPA--SQGPYPARAEVLAYLAQYEQK-YALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp --CCCC--CSSSSCBHHHHHHHHHHHHHH-TTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred --CCCC--CccCCCCHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 0010 001123345677777777776 677774 8899999888776543777776 899999999999753
No 33
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.40 E-value=4.9e-12 Score=131.82 Aligned_cols=119 Identities=17% Similarity=0.168 Sum_probs=79.1
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.++||+|||||+||++||+.|++.|++|+|+|+.. .|+...||..... . .+ .
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~------~~~~~~gg~~~~~------------------~--~~--~ 72 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM------ANGIAAGGQLTTT------------------T--EI--E 72 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS------BTTBCTTCGGGGS------------------S--EE--C
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC------CCCCCcCcccccc------------------h--hh--c
Confidence 45899999999999999999999999999999953 1122233321100 0 00 0
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEE---ecceEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVT---KIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~---~~g~~i~a~~VIlAtG~~~ 159 (637)
..|. .........+...+.+.+.+ .++.+....|+++..+++.+ .+.+ .++..+.+|.||+|||...
T Consensus 73 ---~~~~---~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~v~~i~~~~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 73 ---NFPG---FPDGLTGSELMDRMREQSTK-FGTEIITETVSKVDLSSKPF-KLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp ---CSTT---CTTCEEHHHHHHHHHHHHHH-TTCEEECSCEEEEECSSSSE-EEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred ---ccCC---CcccCCHHHHHHHHHHHHHH-cCCEEEEeEEEEEEEcCCEE-EEEEEecCCCcEEEeCEEEECcCCCc
Confidence 0011 01123345677777777777 68888744599998766654 3555 3567899999999999853
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.35 E-value=5.6e-12 Score=132.95 Aligned_cols=151 Identities=18% Similarity=0.144 Sum_probs=94.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc------hh-----------hHHHHHH-Hhc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG------KS-----------HLVKEID-AMG 67 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~------~~-----------~l~~el~-~~g 67 (637)
+|||+|||||++|++||+.|+++|++|+|+|++....+..+|.. .|.+. .. ..+.++. .++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRN-SEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSS-CCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCC-ccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 49999999999999999999999999999999732322322221 11110 00 0111110 000
Q ss_pred ---------------------cHHHHHHhhcCCe-Eeeeccc----cCch------hhh-hhhccCHHHHHHHHHHHHHh
Q psy9395 68 ---------------------GIMAIATDKSGIQ-FRILNSS----KGAA------VRA-TRAQVDRILYKQAIRFYLEN 114 (637)
Q Consensus 68 ---------------------g~~~~~~~~~gi~-~~~l~~~----~gp~------~~~-~~~~~d~~~~~~~l~~~l~~ 114 (637)
..........++. ++.+... ..|. .+. ...++++..+...+.+.+++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAES 162 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHHH
Confidence 0011222334554 4444321 1111 111 12246778889999998887
Q ss_pred cCCeEEE-cceeEEEEEeCCeEEEEEEecc--eEEEeceEEEecccc
Q psy9395 115 QLNLYLF-QEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 115 ~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~ 158 (637)
.|++++ +++|+++..++++.+.|.+.+| .+++||.||+|+|.|
T Consensus 163 -~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 163 -DGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp -TTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred -CCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcc
Confidence 688886 8999999887665455888777 589999999999996
No 35
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.34 E-value=1.6e-11 Score=126.62 Aligned_cols=111 Identities=23% Similarity=0.303 Sum_probs=74.6
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEE-EccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLL-LSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~L-iE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
.++||+|||||+||++||+.|++.|++|+| +|+. ...|.. .... .+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~--~~~~--------------------------~~---- 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQI--TSSS--------------------------EI---- 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGG--GGCS--------------------------CB----
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCcee--eeec--------------------------ee----
Confidence 458999999999999999999999999999 9994 222221 1100 00
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeC--CeEEEE-EEecceEEEeceEEEecccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKT--NKILGV-VTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~--~~v~gV-~~~~g~~i~a~~VIlAtG~~ 158 (637)
...|. .........+...+.+.+.+ .++.+...+|+++ .++ +.+ .+ ...++ .+.+|.||+|||..
T Consensus 50 ---~~~~~---~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 50 ---ENYPG---VAQVMDGISFMAPWSEQCMR-FGLKHEMVGVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp ---CCSTT---CCSCBCHHHHHHHHHHHHTT-TCCEEECCCEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEE
T ss_pred ---ccCCC---CCCCCCHHHHHHHHHHHHHH-cCcEEEEEEEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCC
Confidence 00011 11123445677777777776 6888876699998 665 443 33 22334 89999999999984
No 36
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.33 E-value=3.8e-11 Score=114.01 Aligned_cols=108 Identities=22% Similarity=0.189 Sum_probs=76.4
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||++|+++|..|++.|.+|+|+|+....... ... + .
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~---~~~----------------------------~-----~ 44 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG---VSR----------------------------V-----P 44 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT---CSC----------------------------C-----C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC---chh----------------------------h-----h
Confidence 389999999999999999999999999999986311100 000 0 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..|.. ........+.+.+.+.+++ .+++++ + +|+++..+++. +.|.+.+| ++.||.||+|+|..
T Consensus 45 --~~~~~---~~~~~~~~~~~~l~~~~~~-~gv~v~~~-~v~~i~~~~~~-~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 45 --NYPGL---LDEPSGEELLRRLEAHARR-YGAEVRPG-VVKGVRDMGGV-FEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp --CSTTC---TTCCCHHHHHHHHHHHHHH-TTCEEEEC-CCCEEEECSSS-EEEECSSC-EEEEEEEEECCTTC
T ss_pred --ccCCC---cCCCCHHHHHHHHHHHHHH-cCCEEEeC-EEEEEEEcCCE-EEEEECCC-EEEECEEEECCCCC
Confidence 00110 0113345667777777776 678885 6 99999876554 45777777 89999999999984
No 37
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.33 E-value=1.1e-11 Score=129.27 Aligned_cols=118 Identities=19% Similarity=0.238 Sum_probs=76.3
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
++||+|||||++|++||+.|++.|++|+|+|+.. .|....+|.... .-..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~------~~~~~~gg~~~~--------------------~~~~---- 57 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWM------ANDIAPGGQLTT--------------------TTDV---- 57 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS------BTTBCTTCGGGG--------------------CSEE----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccC------ccccCCCceeee--------------------cccc----
Confidence 4899999999999999999999999999999821 011111111000 0000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccC
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~ 160 (637)
...|.+ ...+++..+...+.+.+.+ .+++++...|+++..+++.+ .|.+ +|..+++|.||+|||.++.
T Consensus 58 -~~~~~~---~~~~~~~~~~~~l~~~~~~-~gv~~~~~~v~~i~~~~~~~-~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 58 -ENFPGF---PEGILGVELTDKFRKQSER-FGTTIFTETVTKVDFSSKPF-KLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp -CCSTTC---TTCEEHHHHHHHHHHHHHH-TTCEEECCCCCEEECSSSSE-EEEC-SSEEEEEEEEEECCCEEEC
T ss_pred -ccCCCC---ccCCCHHHHHHHHHHHHHH-CCCEEEEeEEEEEEEcCCEE-EEEE-CCcEEEcCEEEECCCCCcC
Confidence 000111 0113345566677777766 67888755588887655543 3555 6788999999999999643
No 38
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.32 E-value=6.5e-12 Score=138.02 Aligned_cols=136 Identities=20% Similarity=0.219 Sum_probs=72.4
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||..|++.|++|+|||+.....|. |.. .+.+....+..... ....+.+......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~--~~~-~gciPsk~l~~~a~----~~~~~~~~~~~~~---- 72 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN--CLY-SGCVPSKTVREVIQ----TAWRLTNIANVKI---- 72 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH--HHH-HSHHHHHHHHHHHH----HHHHHHHHHCSCC----
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc--ccc-cCCCchHHHHHHHH----HHHHHHhcccCCC----
Confidence 499999999999999999999999999999976333222 210 00000001111100 0001111111000
Q ss_pred cccCchhhhhhhccCHHHHH--HHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceE--EEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYK--QAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIK--FFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~--~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~--i~a~~VIlAtG~~ 158 (637)
...++.+......+. . +. ..+...+++ .+++++..++..+. .+. +.|.+.+|.. +.+|.+|+|||+.
T Consensus 73 ~~~~~~~~~~~~~~~-~-l~~~~~~~~~~~~-~~v~~~~g~v~~id--~~~-~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 73 PLDFSTVQDRKDYVQ-E-LRFKQHKRNMSQY-ETLTFYKGYVKIKD--PTH-VIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp CCCHHHHHHHHHHHH-H-HHHHHHHHHHTTC-TTEEEESEEEEEEE--TTE-EEEEETTSCEEEEEEEEEEECCCEE
T ss_pred CcCHHHHHHHHHhhe-e-ccccchHHHHHHh-CCCEEEEeEEEEec--CCe-EEEEcCCCcEEEEecCEEEECCCCC
Confidence 000011100000000 0 11 333334443 78998877777764 343 4466777777 9999999999984
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.32 E-value=1.4e-11 Score=131.24 Aligned_cols=152 Identities=21% Similarity=0.278 Sum_probs=97.6
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccch--------------hhHHHHHHH-hc
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGK--------------SHLVKEIDA-MG 67 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~--------------~~l~~el~~-~g 67 (637)
|+.++||+|||||++|+++|+.|+++|++|+|||+. ...+..++ .+.|.+.. ..+++++.. .+
T Consensus 2 m~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~-~~~~gas~-~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 79 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR-FIGSGSTF-RCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYG 79 (382)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-STTCSHHH-HCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCCCCccc-cccCeeeecCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 345699999999999999999999999999999997 32222111 11111110 011111111 00
Q ss_pred ------c---------------HHHHHHhhcCCeEeeeccc----cCchh---------h-hhhhccCHHHHHHHHHHHH
Q psy9395 68 ------G---------------IMAIATDKSGIQFRILNSS----KGAAV---------R-ATRAQVDRILYKQAIRFYL 112 (637)
Q Consensus 68 ------g---------------~~~~~~~~~gi~~~~l~~~----~gp~~---------~-~~~~~~d~~~~~~~l~~~l 112 (637)
+ ....+....|+.++.++.. ..|.+ + ....++++..+...+.+.+
T Consensus 80 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 159 (382)
T 1y56_B 80 FSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKA 159 (382)
T ss_dssp CCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHH
T ss_pred CCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHH
Confidence 0 0012223446555554421 11211 1 1123577888899999988
Q ss_pred HhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 113 ENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 113 ~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
++ .|++++ +++|+++..+++++.+|.+.+| .++||.||+|||.|
T Consensus 160 ~~-~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 160 KE-YGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp HH-TTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred HH-CCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchh
Confidence 87 688886 7899999888888888888777 89999999999996
No 40
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.28 E-value=1.8e-10 Score=127.32 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.++|.+.+++ .|.+| ++++|++|..+++++.+|++.+|+++.||.||.+++.+
T Consensus 222 ~l~~aL~~~~~~-~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 222 ALVQGMIKLFQD-LGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHH-TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred chHHHHHHHHHH-hCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 466777888887 56677 69999999999999999999999999999999999875
No 41
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.28 E-value=5.5e-11 Score=132.64 Aligned_cols=182 Identities=18% Similarity=0.183 Sum_probs=90.6
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc--hh-----hHHHHHHHhccHHHHHHhhcC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG--KS-----HLVKEIDAMGGIMAIATDKSG 78 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~--~~-----~l~~el~~~gg~~~~~~~~~g 78 (637)
+|||+|||||+||..||..||+.|++|+|||+.... .... ....||.+ .+ .|+..- .............|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~-~~~~-k~~lGGtCln~GCIPsK~L~~aa-~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS-SQGT-KWGIGGTCVNVGCVPKKLMHYAG-HMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC-TTCC-CCCSSHHHHHHSHHHHHHHHHHH-HHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc-cccc-cCCCCCcccccchHHHHHHHHHH-HHHHHHHhhhHhcC
Confidence 499999999999999999999999999999975311 0000 01123221 11 111110 11111111223456
Q ss_pred CeEeeeccccCchhhhh-hhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEe----cceEEEeceEEE
Q psy9395 79 IQFRILNSSKGAAVRAT-RAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTK----IGIKFFSKTVIL 153 (637)
Q Consensus 79 i~~~~l~~~~gp~~~~~-~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~----~g~~i~a~~VIl 153 (637)
+.+....- .++.+... +..+ ..+...+...+++ .+++++.....-+ +...+. |... ++++++++.+||
T Consensus 119 i~~~~~~~-d~~~~~~~~~~~v--~~l~~~~~~~l~~-~~V~~i~G~a~f~--~~~~v~-V~~~~~~~~~~~i~a~~iiI 191 (542)
T 4b1b_A 119 WKFDNLKH-DWKKLVTTVQSHI--RSLNFSYMTGLRS-SKVKYINGLAKLK--DKNTVS-YYLKGDLSKEETVTGKYILI 191 (542)
T ss_dssp EEEEEEEE-CHHHHHHHHHHHH--HHHHHHHHHHHHH-TTCEEECEEEEEE--ETTEEE-EEEC--CCCEEEEEEEEEEE
T ss_pred cccCcccc-cHHHHHHHHHHHH--HHHHHHHHHHHHh-CCCEEEeeeEEEc--CCCcce-EeecccCCceEEEeeeeEEe
Confidence 55432110 00111000 0000 1122333444555 7899886655433 344332 3222 236899999999
Q ss_pred ecccccCCceeecc---------cccCC----CCc----cccchHHHHHHHHhcCccceec
Q psy9395 154 TTGTFLNGKIHIGL---------KSYSA----GRF----GDFSTTSLAKRLKELQLSHGRL 197 (637)
Q Consensus 154 AtG~~~~~~~~ig~---------~~~~~----g~~----g~~~~~~l~~~l~~~G~~~~~~ 197 (637)
|||+.+.-...++. ..+.. .+. |......++..+..+|.++.-+
T Consensus 192 ATGs~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii 252 (542)
T 4b1b_A 192 ATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVA 252 (542)
T ss_dssp CCCEEECCCSSSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred ccCCCCCCCCcccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEe
Confidence 99996443211110 00110 110 1224566777778888777654
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.26 E-value=8.8e-12 Score=133.15 Aligned_cols=148 Identities=21% Similarity=0.315 Sum_probs=91.9
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||+++|+.|++.|.+|+|+|+.....+...|.. +... .+.+++..+...........++.+...+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~---~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGE---GLSK-GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCC---EEET-HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCccccc---ccCH-HHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 48999999999999999999999999999999743222233321 1111 2222221110000000000011110000
Q ss_pred cccCchh------hhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cceEEEeceEEEec
Q psy9395 86 SSKGAAV------RATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGIKFFSKTVILTT 155 (637)
Q Consensus 86 ~~~gp~~------~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~~i~a~~VIlAt 155 (637)
....-.+ ......+++..+.+.+.+.+.+ .|++++ +++|+++..+++++.+|.+. ++.+++||.||+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~ 158 (397)
T 3cgv_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAK-AGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp CSSCEEEC-----CCCEEEECHHHHHHHHHHHHHH-HTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHh-CCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECC
Confidence 0000000 0113357888899999998887 688885 88999999888888878773 45689999999999
Q ss_pred ccc
Q psy9395 156 GTF 158 (637)
Q Consensus 156 G~~ 158 (637)
|.+
T Consensus 159 G~~ 161 (397)
T 3cgv_A 159 GFE 161 (397)
T ss_dssp CTT
T ss_pred Ccc
Confidence 996
No 43
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.25 E-value=2.6e-11 Score=133.46 Aligned_cols=144 Identities=24% Similarity=0.281 Sum_probs=74.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccch--h-----hHHHHHHHhccHHHHHHhhc
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGK--S-----HLVKEIDAMGGIMAIATDKS 77 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~--~-----~l~~el~~~gg~~~~~~~~~ 77 (637)
.+|||+|||||+||++||+.|++.|++|+|+|++....|. ...||.+. + .+......+. .+...+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~----~~~GG~~~~~gciPsk~l~~~~~~~~-~~~~~~~~~ 76 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGK----TALGGTCLNVGCIPSKALLDSSYKFH-EAHESFKLH 76 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSS----BCCSHHHHHHSHHHHHHHHHHHHHHH-HHHTTSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCC----CCcCCccccccHHHHHHHHHHHHHHH-HHHHHHHhc
Confidence 3599999999999999999999999999999997433222 12333211 0 0111000000 001112233
Q ss_pred CCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc--eEEEeceEEEec
Q psy9395 78 GIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTT 155 (637)
Q Consensus 78 gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAt 155 (637)
|+...... ..++........+ ...+...+...+++ .+++++...+..+ +.+. +.|.+.+| ..+.+|.+|+||
T Consensus 77 g~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~v~~~~g~~~~~--~~~~-~~v~~~~g~~~~~~~d~lvlAt 150 (476)
T 3lad_A 77 GISTGEVA-IDVPTMIARKDQI-VRNLTGGVASLIKA-NGVTLFEGHGKLL--AGKK-VEVTAADGSSQVLDTENVILAS 150 (476)
T ss_dssp TEECSCCE-ECHHHHHHHHHHH-HHHHHHHHHHHHHH-HTCEEEESEEEEC--STTC-EEEECTTSCEEEECCSCEEECC
T ss_pred CcccCCCc-cCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEeEEEEe--cCCE-EEEEcCCCceEEEEcCEEEEcC
Confidence 33221000 0000000000000 01222333344444 6788876665543 3333 34555566 589999999999
Q ss_pred cccc
Q psy9395 156 GTFL 159 (637)
Q Consensus 156 G~~~ 159 (637)
|+..
T Consensus 151 G~~p 154 (476)
T 3lad_A 151 GSKP 154 (476)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9853
No 44
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.25 E-value=1.2e-11 Score=131.55 Aligned_cols=148 Identities=22% Similarity=0.325 Sum_probs=90.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
.|||+|||||+||++||+.|++.|++|+|+|+.........|.. ++.. ...++++.............+..+...+
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~---~l~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGE---GLSK-GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCC---EEET-HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceec---ccCH-HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 49999999999999999999999999999999743333333432 2222 2222221111000000000000000000
Q ss_pred ccc------CchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec-c--eEEEeceEEEec
Q psy9395 86 SSK------GAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI-G--IKFFSKTVILTT 155 (637)
Q Consensus 86 ~~~------gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~-g--~~i~a~~VIlAt 155 (637)
... ..........+++..+...|.+.+.+ .|++++ +++|+++..+++++.++.... + .+++||.||.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~-~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAd 158 (397)
T 3oz2_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAK-AGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp CSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHH-HTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CceEeeccccccCCceeEEEEHHHHHHHHHHHHHh-cCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCC
Confidence 000 00001112357888888888888887 577774 899999998998887776543 3 479999999999
Q ss_pred ccc
Q psy9395 156 GTF 158 (637)
Q Consensus 156 G~~ 158 (637)
|..
T Consensus 159 G~~ 161 (397)
T 3oz2_A 159 GFE 161 (397)
T ss_dssp CTT
T ss_pred ccc
Confidence 985
No 45
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.25 E-value=1.3e-10 Score=119.76 Aligned_cols=112 Identities=24% Similarity=0.374 Sum_probs=75.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||..|++.|++|+|+|+. ..|. |.... ++ . +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~--~~~~~--------------------------~~--~--~ 46 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQ--ILDTV--------------------------DI--E--N 46 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGG--GGGCC--------------------------EE--C--C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCce--ecccc--------------------------cc--c--c
Confidence 389999999999999999999999999999863 1111 11100 00 0 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC--CeEEEEEEecceEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT--NKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~--~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.+. . ...+...+...+.+.+++ .+++++ +++|+.+..+. +..+.|.+.+|..+.+|.||+|||+.+
T Consensus 47 ---~~~---~-~~~~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 47 ---YIS---V-PKTEGQKLAGALKVHVDE-YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp ---BTT---B-SSEEHHHHHHHHHHHHHT-SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred ---ccC---c-CCCCHHHHHHHHHHHHHH-cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 000 0 012334566667777766 688886 56999986542 224557777888899999999999864
No 46
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.25 E-value=1.7e-11 Score=131.65 Aligned_cols=148 Identities=13% Similarity=0.180 Sum_probs=93.6
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe-
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR- 82 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~- 82 (637)
..++||+|||||++|+++|+.|++.|.+|+|+|+... .....|..... ....+.++.++- ...+. ..+....
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~-~~~~~~~~~l~----~~~~~~l~~~g~-~~~~~-~~~~~~~~ 76 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR-ERAINGADLLK----PAGIRVVEAAGL-LAEVT-RRGGRVRH 76 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC-C---CCCCEEC----HHHHHHHHHTTC-HHHHH-HTTCEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-CCccCceeeEC----chHHHHHHHcCc-HHHHH-HhCCCcce
Confidence 3458999999999999999999999999999999732 22222221111 112223333331 11111 1121111
Q ss_pred ----eeccc---cCc--h--hhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEE-EEEEecceEEEec
Q psy9395 83 ----ILNSS---KGA--A--VRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKIL-GVVTKIGIKFFSK 149 (637)
Q Consensus 83 ----~l~~~---~gp--~--~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~-gV~~~~g~~i~a~ 149 (637)
..++. ..+ . .......+++..+.+.|.+.+.+.+++++. +++|+++..+++++. .|.+.+|.+++||
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad 156 (399)
T 2x3n_A 77 ELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPR 156 (399)
T ss_dssp EEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECC
Confidence 10000 000 0 001123578889999999999875589985 889999988777653 5778888899999
Q ss_pred eEEEecccc
Q psy9395 150 TVILTTGTF 158 (637)
Q Consensus 150 ~VIlAtG~~ 158 (637)
.||+|+|.+
T Consensus 157 ~vV~AdG~~ 165 (399)
T 2x3n_A 157 VVVGADGIA 165 (399)
T ss_dssp EEEECCCTT
T ss_pred EEEECCCCC
Confidence 999999996
No 47
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.24 E-value=3.1e-11 Score=134.51 Aligned_cols=37 Identities=32% Similarity=0.577 Sum_probs=33.5
Q ss_pred CCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 2 LFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 2 ~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|...|||+|||||+||+.||..|++.|++|+|||++
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~ 64 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFV 64 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecc
Confidence 3444699999999999999999999999999999985
No 48
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.23 E-value=5.1e-11 Score=131.48 Aligned_cols=147 Identities=20% Similarity=0.262 Sum_probs=76.2
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
|+.+|||+|||||+||++||+.|++.|++|+|||++....|. |.. .+++....+......+.. .++....|+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~--~~~-~g~~psk~ll~~~~~~~~--~~~~~~~gi~~~ 77 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGV--CLN-VGCIPSKALLHNAAVIDE--VRHLAANGIKYP 77 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHH--HHH-HSHHHHHHHHHHHHHHHH--HHHGGGGTCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCc--eee-ecccchHHHHHHHHHHHH--HHHHHhCCcccC
Confidence 344599999999999999999999999999999996333222 211 011111111111111111 122334455431
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc------------eEEEece
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG------------IKFFSKT 150 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g------------~~i~a~~ 150 (637)
... .....+......+ ...+...+...+.+ .+++++...+.. .+++. +.|.+.+| .++++|.
T Consensus 78 ~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~-~gv~~~~g~~~~--~~~~~-v~v~~~~g~~~~~~~~~g~~~~i~ad~ 151 (482)
T 1ojt_A 78 EPE-LDIDMLRAYKDGV-VSRLTGGLAGMAKS-RKVDVIQGDGQF--LDPHH-LEVSLTAGDAYEQAAPTGEKKIVAFKN 151 (482)
T ss_dssp CCC-CCHHHHHHHHHHH-HHHHHHHHHHHHHH-TTCEEEEEEEEE--EETTE-EEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CCc-cCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCcEEEeeEEEE--ccCCE-EEEEecCCcccccccccCcceEEEcCE
Confidence 100 0000000000000 01223334455554 688886444333 34443 33544445 6799999
Q ss_pred EEEecccccC
Q psy9395 151 VILTTGTFLN 160 (637)
Q Consensus 151 VIlAtG~~~~ 160 (637)
+|+|||+++.
T Consensus 152 lViAtGs~p~ 161 (482)
T 1ojt_A 152 CIIAAGSRVT 161 (482)
T ss_dssp EEECCCEEEC
T ss_pred EEECCCCCCC
Confidence 9999999743
No 49
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.23 E-value=1.2e-10 Score=124.85 Aligned_cols=149 Identities=19% Similarity=0.224 Sum_probs=96.0
Q ss_pred cccEEEECcchHHHHHHHHHhh-CC-CcEEEEccCCCCCCcccccCCCCccch-------h-------hHHHHHHH-hc-
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR-MG-QKTLLLSHNIDTIGQMSCNPSIGGIGK-------S-------HLVKEIDA-MG- 67 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~-~G-~~V~LiE~~~~~~G~~~cn~s~gg~~~-------~-------~l~~el~~-~g- 67 (637)
++||+|||||++|+++|+.|++ .| ++|+|||++. ..+..++ .+.|.+.. . .+++++.. .+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~gas~-~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 98 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAGGNMA-RNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEY 98 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTCSGGG-TSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCCCccc-ccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999 99 9999999974 2222221 11121110 0 11111110 00
Q ss_pred ----------------------cHHHHHHhhcCCeEeeeccc----cCch--------------hh-hhhhccCHHHHHH
Q psy9395 68 ----------------------GIMAIATDKSGIQFRILNSS----KGAA--------------VR-ATRAQVDRILYKQ 106 (637)
Q Consensus 68 ----------------------g~~~~~~~~~gi~~~~l~~~----~gp~--------------~~-~~~~~~d~~~~~~ 106 (637)
.....+....|+.++.++.. ..|. ++ ....++++..+..
T Consensus 99 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (405)
T 2gag_B 99 DFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAW 178 (405)
T ss_dssp CCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHH
T ss_pred CcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHH
Confidence 00112233455555544321 1111 11 1123567778888
Q ss_pred HHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 107 AIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 107 ~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+.+++ .|++++ +++|+++..+++++++|.+.+| ++.||.||+|+|.|
T Consensus 179 ~l~~~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 179 AFARKANE-MGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHH-TTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred HHHHHHHH-CCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 89988887 688885 7999999887788888888877 79999999999996
No 50
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=4.3e-11 Score=126.97 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=93.2
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCcc----chh---h-------HHHHHH-Hhc--
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI----GKS---H-------LVKEID-AMG-- 67 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~----~~~---~-------l~~el~-~~g-- 67 (637)
+++||+|||||++|+++|+.|+ +|++|+|+|++. ..|......+.|.. ... . +++++. .++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~-~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA-QPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS-STTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC-CccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 3589999999999999999999 599999999973 23321111111111 000 0 011000 000
Q ss_pred ------c--------------HHHHHHhhcCCeEeeecc----ccCch---------hhhh-hhccCHHHHHHHHHHHHH
Q psy9395 68 ------G--------------IMAIATDKSGIQFRILNS----SKGAA---------VRAT-RAQVDRILYKQAIRFYLE 113 (637)
Q Consensus 68 ------g--------------~~~~~~~~~gi~~~~l~~----~~gp~---------~~~~-~~~~d~~~~~~~l~~~l~ 113 (637)
+ .........++.++.++. ...|. ++.+ ..++++..+...+.+.++
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 165 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR 165 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH
Confidence 0 011222334555554432 11111 1111 235778889999999988
Q ss_pred hcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 114 NQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 114 ~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+ .|++++ +++|++|..++++ ++|.+.+| +++||.||+|||+|
T Consensus 166 ~-~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 166 R-NQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp H-TTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGG
T ss_pred H-CCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChh
Confidence 7 688886 8999999988776 67888777 89999999999997
No 51
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.23 E-value=6e-11 Score=126.19 Aligned_cols=150 Identities=17% Similarity=0.257 Sum_probs=90.9
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccch-------h---hH-HHHHHHhccHHHH
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGK-------S---HL-VKEIDAMGGIMAI 72 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~-------~---~l-~~el~~~gg~~~~ 72 (637)
+.++||+|||||++|+++|+.|+++|++|+|||+.. ..+..++. +.|.+.. . .+ ...++.+..+...
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~-~~~g~s~~-~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 92 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT-MGGRTTSA-AAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEE 92 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-TTTTHHHH-CCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCcccchh-cCceeccCccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 346999999999999999999999999999999973 22221111 1111100 0 01 1111222221111
Q ss_pred HHhhcCC-----------------------------eEeeeccc----cCch--------hhh-hhhccCHHHHHHHHHH
Q psy9395 73 ATDKSGI-----------------------------QFRILNSS----KGAA--------VRA-TRAQVDRILYKQAIRF 110 (637)
Q Consensus 73 ~~~~~gi-----------------------------~~~~l~~~----~gp~--------~~~-~~~~~d~~~~~~~l~~ 110 (637)
..+..++ .++.++.. ..|. ++. ....+++..+...+.+
T Consensus 93 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (382)
T 1ryi_A 93 LYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVK 172 (382)
T ss_dssp HHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHH
T ss_pred HHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHH
Confidence 1111111 11111110 0111 111 1235777888899998
Q ss_pred HHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 111 YLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 111 ~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+++ .|++++ +++|+++..+++++ +|.+.+| ++.||.||+|+|.|
T Consensus 173 ~~~~-~g~~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 173 AAKM-LGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHH-TTCEEETTCCCCEEECSSSSE-EEEETTE-EEEEEEEEECCGGG
T ss_pred HHHH-CCCEEEcCCcEEEEEEECCEE-EEEcCCc-eEEcCEEEECCChh
Confidence 8887 678886 78999998777766 6777766 89999999999996
No 52
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.22 E-value=1.2e-10 Score=124.68 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=89.1
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc-----h----------hhHHHHHHH-hc-
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG-----K----------SHLVKEIDA-MG- 67 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~-----~----------~~l~~el~~-~g- 67 (637)
.++||+|||||++|+++|+.|+++|++|+|||+... .+...++....+.. . ..+++++.. .+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~-~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF-FNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCER 81 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC-CCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCc
Confidence 348999999999999999999999999999999732 22111111011110 0 011111110 00
Q ss_pred --------------------c---HHHHHHhhcCCeEeeeccc----cCch---------hhhh-hhccCHHHHHHHHHH
Q psy9395 68 --------------------G---IMAIATDKSGIQFRILNSS----KGAA---------VRAT-RAQVDRILYKQAIRF 110 (637)
Q Consensus 68 --------------------g---~~~~~~~~~gi~~~~l~~~----~gp~---------~~~~-~~~~d~~~~~~~l~~ 110 (637)
. ....+....|+.++.+... ..|. ++.+ ...+++..+...+.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 82 RLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFT 161 (397)
T ss_dssp CCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHH
T ss_pred cHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHH
Confidence 0 0011223334444333210 0111 0111 124566778888888
Q ss_pred HHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 111 YLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 111 ~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+ .|++++ +++|+++..+++++ .|.+.++ +++|+.||+|||+|
T Consensus 162 ~a~~-~Gv~i~~~~~V~~i~~~~~~v-~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 162 LAQA-AGATLRAGETVTELVPDADGV-SVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHH-TTCEEEESCCEEEEEEETTEE-EEEESSC-EEEEEEEEECCGGG
T ss_pred HHHH-cCCEEECCCEEEEEEEcCCeE-EEEECCC-EEEcCEEEEcCCcC
Confidence 8877 678885 88999998877764 3666555 79999999999996
No 53
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.22 E-value=4.7e-11 Score=131.55 Aligned_cols=34 Identities=26% Similarity=0.627 Sum_probs=32.2
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||+.|++.|++|+|+|++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4699999999999999999999999999999985
No 54
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.22 E-value=1.4e-10 Score=127.97 Aligned_cols=142 Identities=16% Similarity=0.203 Sum_probs=74.9
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.+|||+|||||++|++||+.|++.|++|+|+|+. ..|. .|.. .|.+....++...... .. .......++.+...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~--~~GG-~~~~-~gcip~k~l~~~a~~~-~~-~~~~~~~g~~~~~~ 98 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY--RIGG-TCVI-RGCVPKKLYFYASQYA-QE-FSKSIGFGWKYADP 98 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CTTH-HHHH-HSHHHHHHHHHHHHHH-HH-HHHHGGGTBCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC--CCCC-ceec-cCccccHHHHHHHHHH-HH-HHHHHhCCcccCCC
Confidence 3599999999999999999999999999999994 3332 1211 0111011111110000 00 11122334322110
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEe-cceEEEeceEEEecccccC
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTK-IGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~-~g~~i~a~~VIlAtG~~~~ 160 (637)
. ..++.+..... -....+...+...+.+ .+++++...+..+. ... +.+. ++..+.+|.+|+|||+...
T Consensus 99 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~v~~~~g~~~~i~--~~~---v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 99 I-FNWEKLVAAKN-KEISRLEGLYREGLQN-SNVHIYESRAVFVD--EHT---LELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp E-ECHHHHHHHHH-HHHHHHHHHHHHHHHH-TTCEEEESCEEEEE--TTE---EEETTTCCEEEEEEEEECCCEEEC
T ss_pred c-cCHHHHHHHHH-HHHHHHHHHHHHHHHh-CCCEEEEeEEEEee--CCE---EEEecCCeEEEeCEEEEccCCCcc
Confidence 0 00010000000 0001233444555555 68998877776653 332 4444 6678999999999998644
No 55
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.21 E-value=7.9e-11 Score=130.16 Aligned_cols=34 Identities=32% Similarity=0.608 Sum_probs=31.9
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||..|++.|++|+|||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 4599999999999999999999999999999973
No 56
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.20 E-value=9.3e-11 Score=129.65 Aligned_cols=144 Identities=19% Similarity=0.281 Sum_probs=73.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||+.|++.|++|+|||+.....|. |.. .|.+....+......+. .........|+......
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~--~~~-~gciP~k~l~~~~~~~~-~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT--CLN-VGCIPSKALLHASEMFH-QAQHGLEALGVEVANPK 100 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH--HHH-HSHHHHHHHHHHHHHHH-HHHHSSGGGTEECCCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc--ccc-ccchhhHHHHHHHHHHH-HHHhhHhhcCcccCCCc
Confidence 389999999999999999999999999999986333222 211 00000111111111110 00111122333221100
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc--eEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~~ 159 (637)
..++.+...... ....+...+...+.+ .+++++...+..+ +.+. +.|.+.+| ..+.+|.||+|||+.+
T Consensus 101 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~v~~~~g~~~~~--~~~~-~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 101 -LNLQKMMAHKDA-TVKSNVDGVSFLFKK-NKIDGFQGTGKVL--GQGK-VSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp -ECHHHHHHHHHH-HHHHHHHHHHHHHHH-TTCEEEESEEEEC--SSSE-EEEECTTSCEEEEECSEEEECCCEEC
T ss_pred -cCHHHHHHHHHH-HHHHHHHHHHHHHHh-CCCEEEEEEEEEe--cCCE-EEEEeCCCceEEEEeCEEEEccCCCC
Confidence 000000000000 001222334444444 6888876665443 3333 44655666 5899999999999853
No 57
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.20 E-value=7.8e-11 Score=131.01 Aligned_cols=149 Identities=21% Similarity=0.271 Sum_probs=91.8
Q ss_pred CCCC-CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHH-HHHHhccHHHHHHhhcC
Q psy9395 1 MLFK-SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVK-EIDAMGGIMAIATDKSG 78 (637)
Q Consensus 1 M~~~-~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~-el~~~gg~~~~~~~~~g 78 (637)
|+|. .+|||+|||||++|+++|+.|++.|++|+|+|+.. ..... .|........+ -++.++- . ......+
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~-~~~~~-----~g~~~~~~~~~~~l~~lgl-~-~~~~~~~ 72 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA-FPRHQ-----IGESLLPATVHGICAMLGL-T-DEMKRAG 72 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC-SSCCC-----SCCBCCHHHHTTHHHHTTC-H-HHHHTTT
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC-CCCCC-----CCcccCcchHHHHHHHhCc-H-HHHHHcC
Confidence 5543 35899999999999999999999999999999973 11111 11111111111 1222221 1 1111222
Q ss_pred CeEeee-----ccc---------cCc-hhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe-
Q psy9395 79 IQFRIL-----NSS---------KGA-AVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK- 141 (637)
Q Consensus 79 i~~~~l-----~~~---------~gp-~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~- 141 (637)
...... ... ..+ ........+++..+...|.+.+.+ .|++++ +++|+++..+++++.+|.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~~~~V~~v~~~~~~v~gv~~~~ 151 (512)
T 3e1t_A 73 FPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSER-KGVDVRERHEVIDVLFEGERAVGVRYRN 151 (512)
T ss_dssp CCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEETTEEEEEEEEC
T ss_pred CccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEECCEEEEEEEEe
Confidence 221110 000 000 001123357888999999999887 789985 88999999888888777764
Q ss_pred -cc--eEEEeceEEEecccc
Q psy9395 142 -IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 142 -~g--~~i~a~~VIlAtG~~ 158 (637)
+| .+++||.||+|+|.+
T Consensus 152 ~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 152 TEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp SSSCEEEEEEEEEEECCCTT
T ss_pred CCCCEEEEEcCEEEECCCcc
Confidence 46 489999999999996
No 58
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.20 E-value=1.9e-11 Score=133.73 Aligned_cols=145 Identities=23% Similarity=0.348 Sum_probs=91.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCC-CCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe---
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDT-IGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ--- 80 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~-~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~--- 80 (637)
..|||+|||||+||++||+.|++.|.+|+|+|+.... .|...|... ++. +.++.++-.. ...+.....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~---l~~----~~l~~lg~~~-~~~~~~~~~~~~ 76 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDA---VSK----AHFDKLGMPY-PKGEELENKING 76 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCE---EEH----HHHHHTTCCC-CCGGGEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccc---ccH----HHHHHhcCCC-CchHHHHhhhcc
Confidence 3599999999999999999999999999999997422 222223221 111 1222222100 000000000
Q ss_pred EeeeccccCch--hhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEE
Q psy9395 81 FRILNSSKGAA--VRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVI 152 (637)
Q Consensus 81 ~~~l~~~~gp~--~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VI 152 (637)
........... .......+++..+.+.+.+.+.+ .|++++ +++|+++..+++++.+|.+. +|. +++||.||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV 155 (453)
T 3atr_A 77 IKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQD-RGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVV 155 (453)
T ss_dssp EEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHH-TTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEE
T ss_pred eEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHH-cCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEE
Confidence 01111000000 01122357888899999998887 788885 88999998888888777765 565 89999999
Q ss_pred Eecccc
Q psy9395 153 LTTGTF 158 (637)
Q Consensus 153 lAtG~~ 158 (637)
+|+|.+
T Consensus 156 ~AdG~~ 161 (453)
T 3atr_A 156 EATGYS 161 (453)
T ss_dssp ECCGGG
T ss_pred ECcCCc
Confidence 999996
No 59
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.18 E-value=1.8e-10 Score=121.91 Aligned_cols=150 Identities=15% Similarity=0.219 Sum_probs=92.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccC-------CCCccc-h-------hhHHHHHHHhc----
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNP-------SIGGIG-K-------SHLVKEIDAMG---- 67 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~-------s~gg~~-~-------~~l~~el~~~g---- 67 (637)
|||+|||||++|+++|+.|+++|++|+|||+.....+..+.+. ..+... . ..+++++...+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~ 82 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDDP 82 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8999999999999999999999999999999743222111110 011000 0 01122221000
Q ss_pred ------------------cHHHHHHhhcCCeEeeeccc----cCchh---------h-hhhhccCHHHHHHHHHHHHHhc
Q psy9395 68 ------------------GIMAIATDKSGIQFRILNSS----KGAAV---------R-ATRAQVDRILYKQAIRFYLENQ 115 (637)
Q Consensus 68 ------------------g~~~~~~~~~gi~~~~l~~~----~gp~~---------~-~~~~~~d~~~~~~~l~~~l~~~ 115 (637)
..........|+.++.++.. ..|.+ + ....++++..+...+.+.+.+
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~- 161 (372)
T 2uzz_A 83 IFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE- 161 (372)
T ss_dssp SEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH-
T ss_pred ceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH-
Confidence 00112233445555554421 11111 0 112256677888888888887
Q ss_pred CCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 116 LNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 116 ~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.|++++ +++|+++..++++ +.|.+.+| .++||.||+|||.|.
T Consensus 162 ~G~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 162 AGCAQLFNCPVTAIRHDDDG-VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp TTCEEECSCCEEEEEECSSS-EEEEESSC-EEEEEEEEECCGGGG
T ss_pred CCCEEEcCCEEEEEEEcCCE-EEEEECCC-eEEcCEEEEcCCccH
Confidence 678886 7899999877665 45777766 599999999999983
No 60
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.18 E-value=3.5e-10 Score=121.97 Aligned_cols=144 Identities=19% Similarity=0.164 Sum_probs=90.3
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe-----
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ----- 80 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~----- 80 (637)
.+||+|||||++|+++|+.|++.|.+|+|+|+... . ...|..+. .......++.++- .. .....+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~-~-~~~~g~~~----~~~~~~~l~~~g~-~~-~~~~~~~~~~~~~ 76 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF-P-RFVIGESL----LPRCMEHLDEAGF-LD-AVKAQGFQQKFGA 76 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS-S-CCCSCCBC----CGGGHHHHHHTTC-HH-HHHHTTCEEECEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC-C-CCcccCcc----cHhHHHHHHHcCC-hH-HHHHcCCcccCCc
Confidence 48999999999999999999999999999999631 1 11111111 1111222333321 11 11222222
Q ss_pred -Eeeecc-------ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeE-EEEEEecce--EEEe
Q psy9395 81 -FRILNS-------SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKI-LGVVTKIGI--KFFS 148 (637)
Q Consensus 81 -~~~l~~-------~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v-~gV~~~~g~--~i~a 148 (637)
+..-.. ...........++++..+...+.+.+.+ .|++++ +++|+++..+++++ +.+.+.+|. +++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a 155 (421)
T 3nix_A 77 KFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAAR-QGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEA 155 (421)
T ss_dssp EEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHH-HTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEE
T ss_pred EEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEc
Confidence 111000 0000001223468888999999999887 488885 88999998876653 455667776 7999
Q ss_pred ceEEEecccc
Q psy9395 149 KTVILTTGTF 158 (637)
Q Consensus 149 ~~VIlAtG~~ 158 (637)
|.||+|+|.+
T Consensus 156 ~~vV~A~G~~ 165 (421)
T 3nix_A 156 RFIIDASGYG 165 (421)
T ss_dssp EEEEECCGGG
T ss_pred CEEEECCCCc
Confidence 9999999985
No 61
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.17 E-value=4.7e-10 Score=124.94 Aligned_cols=113 Identities=24% Similarity=0.376 Sum_probs=77.5
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
..|||+|||||+||++||+.|++.|++|+|+|+. ..|. |..+. ++.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~--~~~~~--------------------------~~~---- 256 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQ--VLDTV--------------------------DIE---- 256 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGG--GTTCS--------------------------CBC----
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCc--ccccc--------------------------ccc----
Confidence 3589999999999999999999999999999863 2221 21111 010
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC--CeEEEEEEecceEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT--NKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~--~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
+ .+.. .......+...+.+.+.+ .+++++ +++|+++..+. +..+.|.+.+|..+++|.||+|||++.
T Consensus 257 ~---~~~~----~~~~~~~l~~~l~~~~~~-~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 257 N---YISV----PKTEGQKLAGALKAHVSD-YDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp C---BTTB----SSBCHHHHHHHHHHHHHT-SCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred c---cCCC----CCCCHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 0 0000 012344566677777766 689986 66999986431 223557777888999999999999854
No 62
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.17 E-value=2.4e-10 Score=117.07 Aligned_cols=136 Identities=24% Similarity=0.307 Sum_probs=88.8
Q ss_pred cccEEEECcchHHHHHHHHHhhC-CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM-GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~-G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+|||+|||||++|++||+.|++. |.+|+|+|+.....+. |... ++.....+. ......+++..|+.+...
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~--~~~~-~~~~~~~~~------~~~~~~~l~~~G~~~~~~ 109 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG--AWLG-GQLFSAMIV------RKPAHLFLDEIGVAYDEQ 109 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT--TTCC-STTCCCEEE------ETTTHHHHHHHTCCCEEC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc--eecC-CcchHHHHc------CcHHHHHHHHcCCCcccC
Confidence 48999999999999999999997 9999999997433221 1111 111000000 000123445567765432
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---------cc-----eEEEec
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---------IG-----IKFFSK 149 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---------~g-----~~i~a~ 149 (637)
.. . ....+...+...+.+.+.+..+++++ +++|+++..+++++.+|.+. +| ..+.||
T Consensus 110 ~~---~-----~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad 181 (284)
T 1rp0_A 110 DT---Y-----VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK 181 (284)
T ss_dssp SS---E-----EEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE
T ss_pred CC---E-----EEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECC
Confidence 10 0 00123445666677777665789985 88999999888888888764 22 689999
Q ss_pred eEEEecccc
Q psy9395 150 TVILTTGTF 158 (637)
Q Consensus 150 ~VIlAtG~~ 158 (637)
.||+|||..
T Consensus 182 ~VV~AtG~~ 190 (284)
T 1rp0_A 182 IVVSSCGHD 190 (284)
T ss_dssp EEEECCCSS
T ss_pred EEEECCCCc
Confidence 999999984
No 63
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.16 E-value=3.4e-10 Score=130.11 Aligned_cols=60 Identities=10% Similarity=0.038 Sum_probs=50.7
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.+++..+...+.+.+++ .|+++ .+++|++|..+++++ +|.+.+|.++.||.||+|||+|.
T Consensus 413 ~v~p~~l~~aL~~~a~~-~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQ-QGLQIYYQYQLQNFSRKDDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp EECHHHHHHHHHHHHHH-TTCEEEESCCEEEEEEETTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred eeCHHHHHHHHHHHHHh-CCCEEEeCCeeeEEEEeCCeE-EEEECCCCEEECCEEEECCCcch
Confidence 46778888899988887 67888 589999999888874 68887877899999999999973
No 64
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.15 E-value=5.9e-11 Score=127.74 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=88.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe---E
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ---F 81 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~---~ 81 (637)
+.|||+|||||++|+++|+.|++.|.+|+|+|+... .....|.... .....+.++.+|- ...+. ..+.. +
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~-~~~~~~~~~l----~~~~~~~l~~lg~-~~~~~-~~~~~~~~~ 94 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE-IKPVGAAISV----WPNGVKCMAHLGM-GDIME-TFGGPLRRM 94 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC-C----CEEEE----CHHHHHHHHHTTC-HHHHH-HHSCCCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC-CCCcCeeEEE----CHHHHHHHHHCCC-HHHHH-hhcCCCcce
Confidence 459999999999999999999999999999999742 2211111111 1122233344432 11111 11111 1
Q ss_pred eeeccccC------c--hh----hhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEe
Q psy9395 82 RILNSSKG------A--AV----RATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFS 148 (637)
Q Consensus 82 ~~l~~~~g------p--~~----~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a 148 (637)
...+...+ + .. ......+++..+.+.|.+.+.+ +.+ ++++|+++..+++++ .|.+.+|.++.|
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~a 170 (407)
T 3rp8_A 95 AYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADGV-TVWFTDGSSASG 170 (407)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTEE-EEEETTSCEEEE
T ss_pred EEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCcE-EEEEcCCCEEee
Confidence 11111101 0 00 0122356778888888888865 555 589999998887764 477888889999
Q ss_pred ceEEEecccc
Q psy9395 149 KTVILTTGTF 158 (637)
Q Consensus 149 ~~VIlAtG~~ 158 (637)
|.||.|+|.+
T Consensus 171 ~~vV~AdG~~ 180 (407)
T 3rp8_A 171 DLLIAADGSH 180 (407)
T ss_dssp SEEEECCCTT
T ss_pred CEEEECCCcC
Confidence 9999999996
No 65
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.15 E-value=1.2e-10 Score=126.78 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=72.2
Q ss_pred cccEEEECcchHHHHHHHHHhh---CCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR---MGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~---~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
+.||+|||||+||++||..|++ .|++|+|||++.. ... .+ ....+ .
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~-~~~---~~---------~~~~~------~------------ 52 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY-FQF---VP---------SNPWV------G------------ 52 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE-EEC---GG---------GHHHH------H------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC-Ccc---cC---------Ccccc------c------------
Confidence 4799999999999999999999 8999999998631 100 00 00000 0
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccccC
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~~ 160 (637)
....+...+...+.+.+++ .+++++.++|+.+..++.. |.+.+|..+.+|.||+|||+...
T Consensus 53 -------------~g~~~~~~~~~~l~~~~~~-~gv~~~~~~v~~id~~~~~---V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 53 -------------VGWKERDDIAFPIRHYVER-KGIHFIAQSAEQIDAEAQN---ITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp -------------HTSSCHHHHEEECHHHHHT-TTCEEECSCEEEEETTTTE---EEETTSCEEECSEEEECCCCEEC
T ss_pred -------------cCccCHHHHHHHHHHHHHH-CCCEEEEeEEEEEEcCCCE---EEECCCCEEECCEEEECCCCCcC
Confidence 0011122222223344444 6899988899999765553 66778888999999999998543
No 66
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.14 E-value=4.2e-10 Score=126.97 Aligned_cols=144 Identities=17% Similarity=0.188 Sum_probs=92.5
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe---
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR--- 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~--- 82 (637)
.+||+|||||+||++||+.|++.|.+|+|||+.. .. ...+ |........+.++.+|-. . .....+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~-~~-~~~~----G~~l~p~~~~~l~~lGl~-~-~l~~~~~~~~~~~ 94 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA-FP-RYRV----GESLLPGTMSILNRLGLQ-E-KIDAQNYVKKPSA 94 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-SS-CCCC----CCBCCHHHHHHHHHTTCH-H-HHHHHCCEEECEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC-CC-CCce----eeeECHHHHHHHHHcCCc-H-HHHhcCCcccCCc
Confidence 4899999999999999999999999999999963 21 1111 111111222333344321 1 1112222111
Q ss_pred -ee-cc------------ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe-cc--e
Q psy9395 83 -IL-NS------------SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK-IG--I 144 (637)
Q Consensus 83 -~l-~~------------~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~-~g--~ 144 (637)
.. .. ...+........+++..+...|.+.+.+ .|++++ +++|+++..+++.+++|.+. +| .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~ 173 (591)
T 3i3l_A 95 TFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARS-RGITVHEETPVTDVDLSDPDRVVLTVRRGGESV 173 (591)
T ss_dssp EEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHH-TTCEEETTCCEEEEECCSTTCEEEEEEETTEEE
T ss_pred EEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCCEEEEEEecCCceE
Confidence 00 00 0000011123367888999999999887 789986 78999998776667778877 56 5
Q ss_pred EEEeceEEEecccc
Q psy9395 145 KFFSKTVILTTGTF 158 (637)
Q Consensus 145 ~i~a~~VIlAtG~~ 158 (637)
+++||.||+|+|.+
T Consensus 174 ~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 174 TVESDFVIDAGGSG 187 (591)
T ss_dssp EEEESEEEECCGGG
T ss_pred EEEcCEEEECCCCc
Confidence 89999999999985
No 67
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.14 E-value=3.6e-10 Score=118.17 Aligned_cols=136 Identities=22% Similarity=0.300 Sum_probs=88.9
Q ss_pred cccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
.|||+|||||++|++||+.|+++ |++|+|+|+.....|. .+. .+......+. ......+++..|+.+..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg-~~~--~g~~~~~~~~------~~~~~~~L~~~Gv~~~~ 149 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG-AWL--GGQLFSAMVM------RKPADVFLDEVGVPYED 149 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT-TTC--CBTTCCCEEE------ETTTHHHHHHHTCCCEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc-ccc--CCccchhhhc------chHHHHHHHHcCCcccc
Confidence 48999999999999999999997 9999999997433322 111 0000000000 01113455666776543
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC-----------------C--eEEEEEEe--
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT-----------------N--KILGVVTK-- 141 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~-----------------~--~v~gV~~~-- 141 (637)
. +.. ....+...+...|.+.+.++++++++ ++.|+++..++ + ++.||.+.
T Consensus 150 ~----G~~----~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~ 221 (344)
T 3jsk_A 150 E----GDY----VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWT 221 (344)
T ss_dssp C----SSE----EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEH
T ss_pred c----CCe----EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeee
Confidence 2 110 01112345667777778776899996 78899998765 3 78888763
Q ss_pred ------------cceEEEeceEEEecccc
Q psy9395 142 ------------IGIKFFSKTVILTTGTF 158 (637)
Q Consensus 142 ------------~g~~i~a~~VIlAtG~~ 158 (637)
+..+|+|+.||+|||..
T Consensus 222 ~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~ 250 (344)
T 3jsk_A 222 LVSMHHDDQSAMDPNTINAPVIISTTGHD 250 (344)
T ss_dssp HHHTTSSSSSCCBCEEEECSEEEECCCSS
T ss_pred eeeccCCcccccCceEEEcCEEEECCCCC
Confidence 22579999999999985
No 68
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.4e-10 Score=127.36 Aligned_cols=141 Identities=17% Similarity=0.204 Sum_probs=72.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||++|++||+.|++.|++|+|||+. ..|. .|.. .|.+....++...... .. .......++.....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~--~~GG-~~~~-~gcip~k~l~~~~~~~-~~-~~~~~~~g~~~~~~- 77 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF--RYGG-TCVI-RGCVPKKLYVYASQFA-EH-FEDAAGFGWTVGES- 77 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS--CTTH-HHHH-HSHHHHHHHHHHHHHH-HH-HHHGGGGTEEECCC-
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC--CCCC-cccc-cCchhhHHHHHHHHHH-HH-HHHHHhcCcccCCC-
Confidence 599999999999999999999999999999993 3332 1210 0111111111111100 00 01122233322100
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEE-ecceEEEeceEEEecccccC
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVT-KIGIKFFSKTVILTTGTFLN 160 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~-~~g~~i~a~~VIlAtG~~~~ 160 (637)
...++.+.... .-....+...+...+.+ .+++++..++..+ +... +.+ .++..+.+|.+|+|||+...
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~gv~~~~g~~~~i--~~~~---v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 78 RFDWAKLVAAK-EQEIARLEGLYRKGLAN-AGAEILDTRAELA--GPNT---VKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp EECHHHHHHHH-HHHHHHHHHHHHHHHHH-HTCEEEESCEEES--SSSE---EEETTTTEEEEEEEEEECCCEEEC
T ss_pred CcCHHHHHHHH-HHHHHHHHHHHHHHHHh-CCCEEEEEEEEEe--eCCE---EEEecCCeEEEeCEEEEecCCCcc
Confidence 00001000000 00001233344455554 5788876666554 2322 444 46678999999999998533
No 69
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.13 E-value=3.2e-10 Score=130.66 Aligned_cols=61 Identities=18% Similarity=0.110 Sum_probs=49.8
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecce-EEEeceEEEecccccC
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGI-KFFSKTVILTTGTFLN 160 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~-~i~a~~VIlAtG~~~~ 160 (637)
.+++..+...+.+.+++ .|+++ .+++|++|..++++ +.|.+.+|. ++.||.||+|||+|..
T Consensus 408 ~v~p~~l~~aL~~~a~~-~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQ-NGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EECHHHHHHHHHHHHHH-TTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred EECHHHHHHHHHHHHHh-CCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcchh
Confidence 46778888999988887 67888 58999999988776 468887776 8999999999999833
No 70
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.12 E-value=3.4e-10 Score=127.16 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=51.2
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---c--eEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---G--IKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g--~~i~a~~VIlAtG~~ 158 (637)
++++..+...+.+.+.+ .|+++. +++|+++..+++++++|.+.+ | ..++|+.||+|||.|
T Consensus 166 ~vd~~~l~~~L~~~a~~-~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVA-RGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp ECCHHHHHHHHHHHHHH-TTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred eEcHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 67888888888888887 678885 899999999999998998865 3 589999999999997
No 71
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.12 E-value=4.3e-10 Score=123.44 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=32.2
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||+.|++.|++|+|||++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3489999999999999999999999999999986
No 72
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.11 E-value=6.6e-10 Score=118.29 Aligned_cols=149 Identities=21% Similarity=0.260 Sum_probs=90.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCcc-------c--hh-------hHHHHHHH-hc-
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI-------G--KS-------HLVKEIDA-MG- 67 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~-------~--~~-------~l~~el~~-~g- 67 (637)
++||+|||||++|+++|+.|+++|++|+|||+.. ..+...+.....+. . .. .+++++.. .+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD-PPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-SSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 3899999999999999999999999999999963 22211111111111 0 00 11122211 00
Q ss_pred ---------------c-----HHHHHHhhcCCeEeeeccc----cCchh---------hhh-hhccCHHHHHHHHHHHHH
Q psy9395 68 ---------------G-----IMAIATDKSGIQFRILNSS----KGAAV---------RAT-RAQVDRILYKQAIRFYLE 113 (637)
Q Consensus 68 ---------------g-----~~~~~~~~~gi~~~~l~~~----~gp~~---------~~~-~~~~d~~~~~~~l~~~l~ 113 (637)
. ....+....|+.++.++.. ..|.+ +.+ ...+++..+...+.+.++
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 0 0011222345544444321 11211 011 124567788888988888
Q ss_pred hcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 114 NQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 114 ~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+ .|++++ +++|+++..+++++ .|.+.+| .++||.||+|+|.|
T Consensus 162 ~-~Gv~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 162 A-RGAKVLTHTRVEDFDISPDSV-KIETANG-SYTADKLIVSMGAW 204 (389)
T ss_dssp H-TTCEEECSCCEEEEEECSSCE-EEEETTE-EEEEEEEEECCGGG
T ss_pred H-CCCEEEcCcEEEEEEecCCeE-EEEeCCC-EEEeCEEEEecCcc
Confidence 7 578886 78999998766653 4666555 79999999999996
No 73
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.11 E-value=2.6e-10 Score=126.18 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
+|||+|||||+||++||..|++.|++|+|+|++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~ 40 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG 40 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 499999999999999999999999999999996
No 74
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.11 E-value=7.7e-10 Score=122.01 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||+.|++.|++|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4599999999999999999999999999999953
No 75
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.11 E-value=5.2e-10 Score=131.59 Aligned_cols=151 Identities=16% Similarity=0.135 Sum_probs=98.1
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCC-cEEEEccCCCC-CCcccccCCCCcc---chhhHH--------HHHHHhc----
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNIDT-IGQMSCNPSIGGI---GKSHLV--------KEIDAMG---- 67 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~~~-~G~~~cn~s~gg~---~~~~l~--------~el~~~g---- 67 (637)
.++||+|||||++|+++|+.|+++|. +|+|||++... .+..+|+. .|.. ...... +.+..+.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~-~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~ 81 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHA-PGLVFQTNPSKTMASFAKYTVEKLLSLTEDGV 81 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTC-CCEECCCCSCHHHHHHHHHHHHHHHHCEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeC-CceeecCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 34899999999999999999999998 99999997422 12233321 1111 000000 0111110
Q ss_pred -------------------c--HHHHHHhhcCCeEeeecc----ccCchh---------hh-hhhccCHHHHHHHHHHHH
Q psy9395 68 -------------------G--IMAIATDKSGIQFRILNS----SKGAAV---------RA-TRAQVDRILYKQAIRFYL 112 (637)
Q Consensus 68 -------------------g--~~~~~~~~~gi~~~~l~~----~~gp~~---------~~-~~~~~d~~~~~~~l~~~l 112 (637)
. ....+....|+.++.++. ...|.. +. ....+++..+...+.+.+
T Consensus 82 ~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a 161 (830)
T 1pj5_A 82 SCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRT 161 (830)
T ss_dssp ESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHH
T ss_pred CCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHH
Confidence 0 001233445666665542 112211 11 123568888999999998
Q ss_pred HhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 113 ENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 113 ~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
++ .|++++ +++|++|..+++++++|.+.+| +++||.||+|+|.|
T Consensus 162 ~~-~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 162 ES-AGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFW 206 (830)
T ss_dssp HH-TTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGG
T ss_pred HH-cCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccc
Confidence 87 688886 8999999988888888888777 79999999999997
No 76
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.10 E-value=3.3e-10 Score=117.74 Aligned_cols=136 Identities=23% Similarity=0.241 Sum_probs=89.9
Q ss_pred cccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
.|||+|||||++|++||+.|++. |++|+|+|+.....|...++ +........ ......+.+..++.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~---g~~~~~~~~------~~~~~~~L~~~Gv~~~~ 135 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG---GQLFSAMVM------RKPAHLFLQELEIPYED 135 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC---GGGCCCEEE------ETTTHHHHHHTTCCCEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccccc---Ccccchhhh------hhHHHHHHHhhCccccc
Confidence 47999999999999999999998 99999999975443332211 111000000 01123455566776643
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe---C-C--eEEEEEEe--------------c
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK---T-N--KILGVVTK--------------I 142 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~---~-~--~v~gV~~~--------------~ 142 (637)
. +... ...+...+...+.+.+.+.+|++++ +++|+++..+ + + ++.||.+. +
T Consensus 136 ~----g~~~----~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d 207 (326)
T 2gjc_A 136 E----GDYV----VVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMD 207 (326)
T ss_dssp C----SSEE----EESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCC
T ss_pred C----CCeE----EEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccC
Confidence 2 1111 0123456777888888777899997 7899999877 3 4 78888763 2
Q ss_pred ceEEEe---------------ceEEEecccc
Q psy9395 143 GIKFFS---------------KTVILTTGTF 158 (637)
Q Consensus 143 g~~i~a---------------~~VIlAtG~~ 158 (637)
+.++.| +.||+|||..
T Consensus 208 ~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~ 238 (326)
T 2gjc_A 208 PNVIELAGYKNDGTRDLSQKHGVILSTTGHD 238 (326)
T ss_dssp CEEEEESCCCSSSCCCSSTTCCEEEECCCCC
T ss_pred ceEEEEeeccccccccccccCCEEEECcCCC
Confidence 357999 9999999973
No 77
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.07 E-value=1.1e-09 Score=117.53 Aligned_cols=151 Identities=18% Similarity=0.174 Sum_probs=87.2
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhc-CC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKS-GI 79 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~-gi 79 (637)
|++.+.+||+|||||++|+++|+.|++.|.+|+|+|+... .+...|..... .......+.++.++- ...+.... ..
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~-~~~~~~g~~~~-~~~~~~~~~l~~~gl-~~~~~~~~~~~ 97 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND-REARIFGGTLD-LHKGSGQEAMKKAGL-LQTYYDLALPM 97 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS-TTCCCCSCCEE-CCTTTHHHHHHHTTC-HHHHHHHCBCC
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-ccccccCCeee-eCCccHHHHHHhcCh-HHHHHHhhccc
Confidence 5444568999999999999999999999999999999743 22211211110 001111222333321 11111110 00
Q ss_pred eEeeeccccC--------chh-hhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEec
Q psy9395 80 QFRILNSSKG--------AAV-RATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSK 149 (637)
Q Consensus 80 ~~~~l~~~~g--------p~~-~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~ 149 (637)
.....+. .+ |.. ......+++..+.+.|.+.+.+ +.+ ++++|+++..+++++ .|.+.+|.+++||
T Consensus 98 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad 172 (398)
T 2xdo_A 98 GVNIADE-KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPGKKKW-TLTFENKPSETAD 172 (398)
T ss_dssp CEEEECS-SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEECSSSE-EEEETTSCCEEES
T ss_pred ceEEECC-CCCchhhccccccCCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEECCCEE-EEEECCCcEEecC
Confidence 0011110 01 110 0011246777777777766542 345 699999998776654 4777888889999
Q ss_pred eEEEeccccc
Q psy9395 150 TVILTTGTFL 159 (637)
Q Consensus 150 ~VIlAtG~~~ 159 (637)
.||.|+|.++
T Consensus 173 ~vV~AdG~~S 182 (398)
T 2xdo_A 173 LVILANGGMS 182 (398)
T ss_dssp EEEECSCTTC
T ss_pred EEEECCCcch
Confidence 9999999974
No 78
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.07 E-value=1.5e-10 Score=130.69 Aligned_cols=143 Identities=16% Similarity=0.229 Sum_probs=89.4
Q ss_pred cccEEEECcchHHHHHHHHHhhC------CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM------GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGI 79 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~------G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi 79 (637)
.|||+|||||+||++||+.|++. |.+|+|||+.....+...+. +.+.. ...+++ ++.+. .. ...+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g---~~l~~-~~l~~l--l~~~~-~~--g~~~ 105 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSG---ACLDP-RAFEEL--FPDWK-EK--GAPL 105 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCC---CEECT-HHHHHH--CTTHH-HH--TCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccc---cccCH-HHHHHH--HHHHH-hc--CCce
Confidence 48999999999999999999999 99999999974322221111 11111 111221 11111 00 0001
Q ss_pred -------eEeeeccc---cC---ch--hhh-hhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC-CeEEEEEEe
Q psy9395 80 -------QFRILNSS---KG---AA--VRA-TRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT-NKILGVVTK 141 (637)
Q Consensus 80 -------~~~~l~~~---~g---p~--~~~-~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~-~~v~gV~~~ 141 (637)
.+..+... .. |. ... ....+++..+.+.|.+.+++ .|++++ ++.|+++..++ +.+.+|.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~l~~~~~g~V~gV~~~ 184 (584)
T 2gmh_A 106 NTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEA-LGVEVYPGYAAAEILFHEDGSVKGIATN 184 (584)
T ss_dssp CEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHH-TTCEEETTCCEEEEEECTTSSEEEEEEC
T ss_pred eeeechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEEcCCCCEEEEEeC
Confidence 01111111 01 11 111 12356778888999998887 589986 88999998765 568788775
Q ss_pred c------c---------eEEEeceEEEecccc
Q psy9395 142 I------G---------IKFFSKTVILTTGTF 158 (637)
Q Consensus 142 ~------g---------~~i~a~~VIlAtG~~ 158 (637)
+ | .+++||.||+|+|.+
T Consensus 185 ~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 185 DVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp CEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred CccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 3 3 589999999999996
No 79
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.06 E-value=6.8e-10 Score=120.99 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=49.5
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEE---------------eCCeEEEEEEecceEE--EeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLII---------------KTNKILGVVTKIGIKF--FSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~---------------~~~~v~gV~~~~g~~i--~a~~VIlAtG~~ 158 (637)
.+++..+...+.+.+++ .|++++ +++|++|.. +++++++|.+.+| ++ .||.||+|||.|
T Consensus 177 ~~~~~~l~~~L~~~~~~-~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASG-AGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp ECCHHHHHHHHHHHHHH-TTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHh-CCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 46777888999988887 678885 799999987 5667778888777 68 999999999997
No 80
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.06 E-value=5.8e-10 Score=123.55 Aligned_cols=33 Identities=33% Similarity=0.533 Sum_probs=31.6
Q ss_pred ccEEEECcchHHHHHHHHHhhC---CCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM---GQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~---G~~V~LiE~~~ 39 (637)
|||+|||||+||++||+.|++. |++|+|||+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 8999999999999999999999 99999999973
No 81
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.04 E-value=8.7e-10 Score=124.03 Aligned_cols=144 Identities=15% Similarity=0.048 Sum_probs=88.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee--
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI-- 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~-- 83 (637)
.|||+|||||++|+++|+.|++.|.+|+|||+... .....+.. ++.. ...+.++.+|- ...+ ...+.....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~-~~~~~r~~---~l~~-~s~~~l~~lGl-~~~l-~~~~~~~~~~~ 121 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE-PVGHDRAG---ALHI-RTVETLDLRGL-LDRF-LEGTQVAKGLP 121 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS-CCCSSSCC---CBCH-HHHHHHHTTTC-HHHH-TTSCCBCSBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC-CCCCceEE---EECH-HHHHHHHHcCC-hHHH-HhcCcccCCce
Confidence 48999999999999999999999999999999743 22211111 1111 12223333331 1111 111111100
Q ss_pred eccc---cCc-----hhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEE--ecc-eEEEeceE
Q psy9395 84 LNSS---KGA-----AVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVT--KIG-IKFFSKTV 151 (637)
Q Consensus 84 l~~~---~gp-----~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~--~~g-~~i~a~~V 151 (637)
.... ... ........+++..+...|.+.+.+ .++++ ++++|+++..+++.+. |.+ .+| .+++||.|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~~~~~a~~v 199 (570)
T 3fmw_A 122 FAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHARE-AGAEIPRGHEVTRLRQDAEAVE-VTVAGPSGPYPVRARYG 199 (570)
T ss_dssp BTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHH-HTEECCBSCEEEECCBCSSCEE-EEEEETTEEEEEEESEE
T ss_pred eCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCeEE-EEEEeCCCcEEEEeCEE
Confidence 0000 000 000112347788889999998887 58888 4889999987766554 555 567 78999999
Q ss_pred EEecccc
Q psy9395 152 ILTTGTF 158 (637)
Q Consensus 152 IlAtG~~ 158 (637)
|.|+|.+
T Consensus 200 V~ADG~~ 206 (570)
T 3fmw_A 200 VGCDGGR 206 (570)
T ss_dssp EECSCSS
T ss_pred EEcCCCC
Confidence 9999996
No 82
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.02 E-value=1.4e-09 Score=121.36 Aligned_cols=148 Identities=12% Similarity=0.067 Sum_probs=91.6
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ 80 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~ 80 (637)
|+. .++||+|||||++|+++|+.|++.|.+|+|||+... .+...|. .++.. ...+.++.+|-. ..+. ..+..
T Consensus 1 M~~-~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~-~~~~~~~---~~l~~-~~~~~l~~lGl~-~~~~-~~~~~ 72 (535)
T 3ihg_A 1 MND-HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG-LSPYPRA---AGQNP-RTMELLRIGGVA-DEVV-RADDI 72 (535)
T ss_dssp CCC-CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS-CCCCCCS---CCBCH-HHHHHHHHTTCH-HHHH-HSCCS
T ss_pred CCC-ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC-CCCCCcc---ceECH-HHHHHHHHcCCH-HHHH-hhCCC
Confidence 542 358999999999999999999999999999999742 2222211 11111 122233333321 1111 11111
Q ss_pred Ee--------ee---ccc-------cCc-------hh-hhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCC
Q psy9395 81 FR--------IL---NSS-------KGA-------AV-RATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTN 133 (637)
Q Consensus 81 ~~--------~l---~~~-------~gp-------~~-~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~ 133 (637)
.. .. ... ..+ .. ......+++..+...|.+.+.+ .|+++. +++|+++..+++
T Consensus 73 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~ 151 (535)
T 3ihg_A 73 RGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDD 151 (535)
T ss_dssp SCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECG
T ss_pred cccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCC
Confidence 00 00 000 000 00 0112346788899999999988 488885 899999988776
Q ss_pred ----eEEEEEEecc---eEEEeceEEEecccc
Q psy9395 134 ----KILGVVTKIG---IKFFSKTVILTTGTF 158 (637)
Q Consensus 134 ----~v~gV~~~~g---~~i~a~~VIlAtG~~ 158 (637)
.+. +.+.++ .+++||.||.|+|.+
T Consensus 152 ~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 152 DAGAGVT-ARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp GGCSEEE-EEEEETTEEEEEEEEEEEECCCTT
T ss_pred CccccEE-EEEEcCCCeEEEEeCEEEECCCCc
Confidence 544 555554 789999999999996
No 83
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.02 E-value=2.3e-09 Score=119.80 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=49.4
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeC-CeEEEEEEecceEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKT-NKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~-~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+++..+...|.+.+.+ .|++++..+|+++..++ +.+++|.+.+|.+++||.||+|+|.+
T Consensus 161 ~i~~~~l~~~L~~~a~~-~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 161 HFDAHLVADFLKRWAVE-RGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp EECHHHHHHHHHHHHHH-TTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred EEeHHHHHHHHHHHHHH-CCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 57788899999998887 68888644899998754 44677888888889999999999996
No 84
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.02 E-value=2.2e-09 Score=120.40 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=50.4
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe-CCeEEEEEEecceEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK-TNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~-~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
++++..+...|.+.+.+.+|++++ + +|+++..+ ++.+++|.+.+|.++.||.||+|+|.+
T Consensus 190 ~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 190 HFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp EECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCc
Confidence 478888999999999885588885 6 99999865 455678888888889999999999986
No 85
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.01 E-value=1.9e-09 Score=114.88 Aligned_cols=139 Identities=13% Similarity=0.120 Sum_probs=88.3
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe---Ee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ---FR 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~---~~ 82 (637)
.+||+|||||++|+++|+.|++.|.+|+|+|+... .+...|... + .....+.++.++- ...+ ...+.. +.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~~~~~~~---l-~~~~~~~l~~~g~-~~~~-~~~~~~~~~~~ 83 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRAFGAGIY---L-WHNGLRVLEGLGA-LDDV-LQGSHTPPTYE 83 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCCCSSEEE---E-EHHHHHHHHHTTC-HHHH-HTTCBCCSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCCCCceEE---e-CccHHHHHHHcCC-HHHH-HhhCCCccceE
Confidence 48999999999999999999999999999999743 222111111 1 1112223333331 1111 111111 11
Q ss_pred eeccccCchh------hhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEec
Q psy9395 83 ILNSSKGAAV------RATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTT 155 (637)
Q Consensus 83 ~l~~~~gp~~------~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAt 155 (637)
.... +... ..+...+++..+...+.+.+.+ .|+++. +++|+++.. ++ .|.+.+|.+++||.||+|+
T Consensus 84 ~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~-~~---~v~~~~g~~~~ad~vV~Ad 156 (379)
T 3alj_A 84 TWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARA-LGVDISVNSEAVAADP-VG---RLTLQTGEVLEADLIVGAD 156 (379)
T ss_dssp EEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHH-TTCEEESSCCEEEEET-TT---EEEETTSCEEECSEEEECC
T ss_pred EEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEe-CC---EEEECCCCEEEcCEEEECC
Confidence 1111 1000 0112356778889999998887 688885 889999976 44 4777788899999999999
Q ss_pred ccc
Q psy9395 156 GTF 158 (637)
Q Consensus 156 G~~ 158 (637)
|.+
T Consensus 157 G~~ 159 (379)
T 3alj_A 157 GVG 159 (379)
T ss_dssp CTT
T ss_pred Ccc
Confidence 996
No 86
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.01 E-value=2.6e-09 Score=118.26 Aligned_cols=147 Identities=16% Similarity=0.088 Sum_probs=89.2
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
.+++||+|||||++|+++|+.|++.|.+|+|||+.... +...|.. ++.. ...+.++.+|- ...+.+........
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-~~~~r~~---~l~~-~~~~~l~~lGl-~~~~~~~~~~~~~~ 82 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER-TGESRGL---GFTA-RTMEVFDQRGI-LPRFGEVETSTQGH 82 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC--CCCCCSE---EECH-HHHHHHHTTTC-GGGGCSCCBCCEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-CCCCCcc---eECH-HHHHHHHHCCC-HHHHHhcccccccc
Confidence 45699999999999999999999999999999997432 2222211 1111 11222333321 10110000000000
Q ss_pred -----eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecce---EEEeceEEEe
Q psy9395 84 -----LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGI---KFFSKTVILT 154 (637)
Q Consensus 84 -----l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~---~i~a~~VIlA 154 (637)
+.....+..+.....+++..+...|.+.+.+ .++++ ++++|+++..+++.+. |.+.++. +++||.||.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgA 160 (500)
T 2qa1_A 83 FGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATG-LGADIRRGHEVLSLTDDGAGVT-VEVRGPEGKHTLRAAYLVGC 160 (500)
T ss_dssp ETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHH-TTCEEEETCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEEC
T ss_pred ccceecccccCCCCCCceeecCHHHHHHHHHHHHHH-CCCEEECCcEEEEEEEcCCeEE-EEEEcCCCCEEEEeCEEEEC
Confidence 0000000001112346677888889888887 57888 5899999988877654 6666653 7999999999
Q ss_pred cccc
Q psy9395 155 TGTF 158 (637)
Q Consensus 155 tG~~ 158 (637)
+|.+
T Consensus 161 DG~~ 164 (500)
T 2qa1_A 161 DGGR 164 (500)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 9996
No 87
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.00 E-value=3.3e-09 Score=118.28 Aligned_cols=61 Identities=16% Similarity=0.192 Sum_probs=49.1
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeC-CeEEEEEEecceEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKT-NKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~-~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+++..+...|.+.+.+..|++++..+|+++..++ +.+++|.+.+|.+++||.||.|+|.+
T Consensus 171 ~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 171 HLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp EECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred EEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 47888899999988886467888644799997764 44567888787789999999999996
No 88
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.00 E-value=2.6e-09 Score=115.03 Aligned_cols=142 Identities=14% Similarity=0.203 Sum_probs=86.6
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCc-EEEEccCCCCCCcccccCCCCccc-hhhHHHHHHHhccHHHHHHhhcCCeEe-
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQK-TLLLSHNIDTIGQMSCNPSIGGIG-KSHLVKEIDAMGGIMAIATDKSGIQFR- 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~-V~LiE~~~~~~G~~~cn~s~gg~~-~~~l~~el~~~gg~~~~~~~~~gi~~~- 82 (637)
.+||+|||||++|+++|+.|++.|.+ |+|+|+... .+...| +.. .....+.++.+|- ...+ ...+....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~-~~~~g~-----g~~l~~~~~~~l~~lg~-~~~l-~~~~~~~~~ 75 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE-IRPLGV-----GINIQPAAVEALAELGL-GPAL-AATAIPTHE 75 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS-CCCCSC-----EEEECHHHHHHHHHTTC-HHHH-HHHSEEECE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC-ccccee-----EEEEChHHHHHHHHCCC-hHHH-HhhCCCcce
Confidence 38999999999999999999999999 999999742 222111 111 1122333444432 1111 11222111
Q ss_pred --eeccccC------c-----hhhhhhhccCHHHHHHHHHHHHHhc-CCeEE-EcceeEEEEEeCCeEEEEEEec---c-
Q psy9395 83 --ILNSSKG------A-----AVRATRAQVDRILYKQAIRFYLENQ-LNLYL-FQEEVDDLIIKTNKILGVVTKI---G- 143 (637)
Q Consensus 83 --~l~~~~g------p-----~~~~~~~~~d~~~~~~~l~~~l~~~-~gv~i-~~~~V~~i~~~~~~v~gV~~~~---g- 143 (637)
..+. .+ + ....+...+++..+...|.+.+.+. +.+.+ ++++|+++.. ++++. |.+.+ |
T Consensus 76 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~ 152 (410)
T 3c96_A 76 LRYIDQ-SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGK 152 (410)
T ss_dssp EEEECT-TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSC
T ss_pred EEEEcC-CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCC
Confidence 1110 00 0 0001123467778888888888753 44556 6999999977 44443 55554 6
Q ss_pred -eEEEeceEEEecccc
Q psy9395 144 -IKFFSKTVILTTGTF 158 (637)
Q Consensus 144 -~~i~a~~VIlAtG~~ 158 (637)
.+++||.||.|+|.+
T Consensus 153 ~~~~~ad~vV~AdG~~ 168 (410)
T 3c96_A 153 PQALGADVLVGADGIH 168 (410)
T ss_dssp EEEEEESEEEECCCTT
T ss_pred ceEEecCEEEECCCcc
Confidence 589999999999996
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.00 E-value=2e-09 Score=117.41 Aligned_cols=145 Identities=16% Similarity=0.164 Sum_probs=82.7
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCC--cEEEEccCCCCCCcccccCCCC---ccch-------------------
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHNIDTIGQMSCNPSIG---GIGK------------------- 56 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~~~~~G~~~cn~s~g---g~~~------------------- 56 (637)
|++...+||+|||||++|++||..|++.|. +|+|+|+.....|......... .+..
T Consensus 1 M~~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 1 MCLPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCCCCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCc
Confidence 655556999999999999999999999999 9999999744433322111000 0000
Q ss_pred -hhHHHHHHHhccHHHHHHhhcCCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCe
Q psy9395 57 -SHLVKEIDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNK 134 (637)
Q Consensus 57 -~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~ 134 (637)
..+++.+.. ..........+..+ |. .......+..+.+.+.+.++.. +..+ ++++|+++..+++.
T Consensus 81 ~~~~~~~l~~--~~~~~~~~~~~~~~--------~~--~~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~ 147 (447)
T 2gv8_A 81 PSPLYRDLQT--NTPIELMGYCDQSF--------KP--QTLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGS 147 (447)
T ss_dssp CCCCCTTCBC--SSCHHHHSCTTCCC--------CT--TCCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTE
T ss_pred cCchhhhhcc--CCCHHHhccCCCCC--------CC--CCCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCe
Confidence 000000000 00000000000100 10 0111234556777777777764 4555 58999999877664
Q ss_pred EEEEEEec---ce---EEEeceEEEeccccc
Q psy9395 135 ILGVVTKI---GI---KFFSKTVILTTGTFL 159 (637)
Q Consensus 135 v~gV~~~~---g~---~i~a~~VIlAtG~~~ 159 (637)
+.|.+.+ |. ++.+|.||+|||.+.
T Consensus 148 -~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 148 -WVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp -EEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred -EEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 4466655 65 799999999999963
No 90
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.00 E-value=7.1e-10 Score=118.96 Aligned_cols=144 Identities=17% Similarity=0.096 Sum_probs=85.0
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc-hhhHHHHHHHhccHHHHHHhhcCC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG-KSHLVKEIDAMGGIMAIATDKSGI 79 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~-~~~l~~el~~~gg~~~~~~~~~gi 79 (637)
|+|. .+||+|||||++|+++|+.|++.|.+|+|+|+........ .+|+. .....+.++.++-.. ...+.
T Consensus 1 M~~~-~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~-----~~g~~l~~~~~~~l~~~g~~~----~~~~~ 70 (397)
T 2vou_A 1 MSPT-TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGF-----GTGIVVQPELVHYLLEQGVEL----DSISV 70 (397)
T ss_dssp -CCC-CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCC-----SCEEECCHHHHHHHHHTTCCG----GGTCB
T ss_pred CCCC-CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc-----ccccccChhHHHHHHHcCCcc----ccccc
Confidence 6543 4899999999999999999999999999999974321110 11111 112233334433211 11111
Q ss_pred eE---eeeccccCchhh---hhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEE
Q psy9395 80 QF---RILNSSKGAAVR---ATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVI 152 (637)
Q Consensus 80 ~~---~~l~~~~gp~~~---~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VI 152 (637)
.. .......+.... .+.....+..+.+.+.+.+ +++++. +++|+++..+++++ .|.+.+|.+++||.||
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v-~v~~~~g~~~~ad~vV 146 (397)
T 2vou_A 71 PSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSETV-QMRFSDGTKAEANWVI 146 (397)
T ss_dssp CCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSCE-EEEETTSCEEEESEEE
T ss_pred cccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCEE-EEEECCCCEEECCEEE
Confidence 11 111110111000 0011233445666666554 567775 88999998777664 4778888899999999
Q ss_pred Eecccc
Q psy9395 153 LTTGTF 158 (637)
Q Consensus 153 lAtG~~ 158 (637)
.|+|.+
T Consensus 147 ~AdG~~ 152 (397)
T 2vou_A 147 GADGGA 152 (397)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999996
No 91
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.00 E-value=1.4e-09 Score=116.74 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=40.2
Q ss_pred cC-ccccccCCCCEEEEEeecCCCC----HHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9395 354 LK-SSLETKQIHGLFFAGQINGTTG----YEEAASQGLLAGLNAALFSQDRDPWI 403 (637)
Q Consensus 354 l~-~tlesk~v~gLf~aGei~G~~G----y~eA~a~G~~AG~naa~~~~~~~~~~ 403 (637)
+| .||+++..||+|++||+++..+ -..|..||.+|+.|++..+.|++|..
T Consensus 276 VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~ 330 (401)
T 3vrd_B 276 VDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGT 330 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 44 4789888999999999864322 23788899999999999999988754
No 92
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.99 E-value=5.1e-10 Score=119.71 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=85.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCC-CcccccCCCCccchhhHHHHHHHhccHHHHHHh----hcCCeE
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTI-GQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATD----KSGIQF 81 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~-G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~----~~gi~~ 81 (637)
+||+|||||++|+++|+.|++.|.+|+|+|+..... ....|. +.+. ....+.++.+|-. ..+.+ ..++.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~---g~l~-~~~~~~l~~lg~~-~~~~~~~~~~~~~~~ 77 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRA---GVLE-QGMVDLLREAGVD-RRMARDGLVHEGVEI 77 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCC---CEEC-HHHHHHHHHTTCC-HHHHHHCEEESCEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCce---EeEC-HHHHHHHHHcCCc-HHHHhcCCccceEEE
Confidence 799999999999999999999999999999963210 011111 1111 1222333333311 11111 111111
Q ss_pred eeeccc---cCchh--hhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEE-ecce--EEEeceEE
Q psy9395 82 RILNSS---KGAAV--RATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVT-KIGI--KFFSKTVI 152 (637)
Q Consensus 82 ~~l~~~---~gp~~--~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~-~~g~--~i~a~~VI 152 (637)
..-... ..+.. ......+++..+.+.+.+.+.+ .++++. +++|+++..+++..+.|.+ .+|. +++||.||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 78 AFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREA-CGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIA 156 (394)
T ss_dssp EETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHH-TTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEE
T ss_pred EECCceEEeccccccCCCceEEechHHHHHHHHHHHHh-cCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEE
Confidence 110000 00000 0011234666677778877776 578885 8899999765333334666 6776 79999999
Q ss_pred Eeccccc
Q psy9395 153 LTTGTFL 159 (637)
Q Consensus 153 lAtG~~~ 159 (637)
.|+|.++
T Consensus 157 ~AdG~~S 163 (394)
T 1k0i_A 157 GCDGFHG 163 (394)
T ss_dssp ECCCTTC
T ss_pred ECCCCCc
Confidence 9999963
No 93
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.99 E-value=3.1e-09 Score=117.95 Aligned_cols=61 Identities=16% Similarity=0.022 Sum_probs=50.5
Q ss_pred hccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEe-CCeEEEEEEecceEEEeceEEEecccc
Q psy9395 97 AQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIK-TNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 97 ~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~-~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..+++..+...|.+.+.+ .|++++..+|+++..+ ++.+++|.+.+|.+++||.||.|+|.+
T Consensus 168 ~~~~~~~l~~~L~~~a~~-~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 168 YHFDADEVARYLSEYAIA-RGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp EEECHHHHHHHHHHHHHH-TTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred EEEcHHHHHHHHHHHHHH-CCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 367888999999998887 7888863399999874 455677888888889999999999997
No 94
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.99 E-value=1.7e-09 Score=119.83 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=48.7
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~~ 158 (637)
++++..+...+.+.+.+ .|++++ +++|+++..++ ++++|.+. +|. .++|+.||+|||.|
T Consensus 145 ~v~~~~l~~~l~~~a~~-~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVR-KGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp EECHHHHHHHHHHHHHH-TTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 56888888899888887 678886 78999998776 57788874 464 79999999999997
No 95
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.98 E-value=2.9e-09 Score=119.82 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=48.6
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cc--eEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g--~~i~a~~VIlAtG~~ 158 (637)
++++..+...+.+.+.+ .|++++ +++|+++..+++++++|.+. +| ..++|+.||+|||.|
T Consensus 184 ~v~~~~l~~~l~~~a~~-~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAE-DGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp ECCHHHHHHHHHHHHHH-TTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred eEchHHHHHHHHHHHHH-cCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 46777777777777776 678886 78999999888888888864 34 379999999999997
No 96
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.97 E-value=4.3e-09 Score=117.96 Aligned_cols=143 Identities=14% Similarity=0.128 Sum_probs=86.0
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeE---
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQF--- 81 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~--- 81 (637)
..+||+|||||++|+++|+.|++.|.+|+|||+.... +...+. .++.. ...+.++.+|- ...+. ..+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~-~~~~~~---~~l~~-~~~~~l~~lGl-~~~~~-~~~~~~~~~ 97 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT-ITHPRV---GTIGP-RSMELFRRWGV-AKQIR-TAGWPGDHP 97 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC-CSSCCC---CEECH-HHHHHHHHTTC-HHHHH-TSSCCTTSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-CCCCce---eeeCH-HHHHHHHHcCC-hHHHH-hhcCCcccc
Confidence 3589999999999999999999999999999997432 221111 11111 12222333331 11111 111110
Q ss_pred ---eeec---c-----ccCch---------hhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEe
Q psy9395 82 ---RILN---S-----SKGAA---------VRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTK 141 (637)
Q Consensus 82 ---~~l~---~-----~~gp~---------~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~ 141 (637)
.... + ...+. .......+++..+.+.|.+.+.+. ..++++|+++..+++++. +.+.
T Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~-v~~~ 173 (549)
T 2r0c_A 98 LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVR-ATIT 173 (549)
T ss_dssp CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEE-EEEE
T ss_pred cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEE-EEEE
Confidence 0000 0 00000 001123467778888888888774 335899999988777654 5554
Q ss_pred c---c--eEEEeceEEEecccc
Q psy9395 142 I---G--IKFFSKTVILTTGTF 158 (637)
Q Consensus 142 ~---g--~~i~a~~VIlAtG~~ 158 (637)
+ | .+++||.||.|+|.+
T Consensus 174 ~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 174 DLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp ETTTCCEEEEEEEEEEECCCTT
T ss_pred ECCCCCEEEEEeCEEEECCCCC
Confidence 4 5 579999999999996
No 97
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.97 E-value=5.8e-09 Score=111.63 Aligned_cols=106 Identities=15% Similarity=0.181 Sum_probs=68.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
...|+|||||+||++||..|+..+.+|+|+|+... .+-.+| .+... +.+ ...
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~-~~y~~~----------~l~~~---l~g---------~~~----- 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKY-LPYYRP----------RLNEI---IAK---------NKS----- 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS-CCBCGG----------GHHHH---HHS---------CCC-----
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC-CCcccC----------hhhHH---HcC---------CCC-----
Confidence 46899999999999999999888999999998632 211111 11110 000 000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. ..... ..+.+++ .++++. +++|+++..++.. |.+.+|.++.+|.+|+|||+.
T Consensus 61 ----~~----~l~~~-------~~~~~~~-~~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 61 ----ID----DILIK-------KNDWYEK-NNIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp ----GG----GTBSS-------CHHHHHH-TTCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred ----HH----HccCC-------CHHHHHH-CCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCCC
Confidence 00 00000 1112223 688885 8899999866553 667888899999999999984
No 98
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.96 E-value=1.3e-09 Score=117.27 Aligned_cols=58 Identities=10% Similarity=0.025 Sum_probs=42.6
Q ss_pred ccCHHHHHHHHHHHHHhcCCeEEE-cceeE---------EEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 98 QVDRILYKQAIRFYLENQLNLYLF-QEEVD---------DLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 98 ~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~---------~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
++++..+...+.+.+++ .|++++ +++|+ ++..+++++ +|.+.+| .++||.||+|+|.|
T Consensus 168 ~v~~~~l~~~L~~~~~~-~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIG-QGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp EECHHHHHHHHHHHHHT-TTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHH-CCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCc-EEECCEEEECCCcc
Confidence 56778889999998887 688885 78898 887666665 6766666 89999999999996
No 99
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.95 E-value=1.4e-09 Score=120.53 Aligned_cols=144 Identities=16% Similarity=0.044 Sum_probs=88.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe--
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR-- 82 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~-- 82 (637)
+++||+|||||++|+++|+.|++.|.+|+|||+.... +...|. .++.. ...+.++.+|- ...+.+. ....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-~~~~r~---~~l~~-~~~~~l~~lGl-~~~~~~~--~~~~~~ 82 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR-TGESRG---LGFTA-RTMEVFDQRGI-LPAFGPV--ETSTQG 82 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC-CCCCCS---EEECH-HHHHHHHHTTC-GGGGCSC--CEESEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCce---eEECH-HHHHHHHHCCC-HHHHHhc--cccccc
Confidence 4589999999999999999999999999999997432 222221 11111 11222333321 1111110 0000
Q ss_pred e-----eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecce---EEEeceEEE
Q psy9395 83 I-----LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGI---KFFSKTVIL 153 (637)
Q Consensus 83 ~-----l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~---~i~a~~VIl 153 (637)
. ++....+..+.....+++..+...|.+.+.+ .++++ ++++|+++..+++.+. |.+.++. +++||.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVg 160 (499)
T 2qa2_A 83 HFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALG-RGAELLRGHTVRALTDEGDHVV-VEVEGPDGPRSLTTRYVVG 160 (499)
T ss_dssp EETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEEECSSCEE-EEEECSSCEEEEEEEEEEE
T ss_pred eecceecccccCCCCCCceEecCHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEE-EEEEcCCCcEEEEeCEEEE
Confidence 0 0000000000112346677888899888887 57888 5899999987777654 6666653 899999999
Q ss_pred ecccc
Q psy9395 154 TTGTF 158 (637)
Q Consensus 154 AtG~~ 158 (637)
|+|.+
T Consensus 161 ADG~~ 165 (499)
T 2qa2_A 161 CDGGR 165 (499)
T ss_dssp CCCTT
T ss_pred ccCcc
Confidence 99996
No 100
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.94 E-value=3.8e-09 Score=110.00 Aligned_cols=119 Identities=18% Similarity=0.179 Sum_probs=78.3
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ 80 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~ 80 (637)
|++ .++||+|||||+||++||+.|++.|++|+|+|++.. .|. .|.. .+. ...
T Consensus 1 m~~-~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-~gg-~~~~---------------~~~----------~~~ 52 (335)
T 2zbw_A 1 MAA-DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE-PGG-QLTA---------------LYP----------EKY 52 (335)
T ss_dssp --C-CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS-SCH-HHHH---------------TCT----------TSE
T ss_pred CCC-CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC-CCC-eeec---------------cCC----------Cce
Confidence 443 458999999999999999999999999999999632 221 0100 000 000
Q ss_pred EeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 81 FRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 81 ~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+ .+. |.. ..+++..+...+.+.+.+ .++.+ ++++|+++..+++. +.|.+.+|..+.+|.||+|||..
T Consensus 53 ~--~~~---~~~----~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 53 I--YDV---AGF----PKVYAKDLVKGLVEQVAP-FNPVYSLGERAETLEREGDL-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp E--CCS---TTC----SSEEHHHHHHHHHHHHGG-GCCEEEESCCEEEEEEETTE-EEEEETTSCEEEEEEEEECCTTS
T ss_pred e--ecc---CCC----CCCCHHHHHHHHHHHHHH-cCCEEEeCCEEEEEEECCCE-EEEEECCCCEEEeCEEEECCCCC
Confidence 0 000 110 012344566667777765 46777 58899999877663 45777777789999999999984
No 101
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.94 E-value=3.4e-09 Score=111.82 Aligned_cols=117 Identities=18% Similarity=0.192 Sum_probs=79.0
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.++||+|||||+||++||+.|++.|++|+|||+... .|. .|. .... ... ..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-~gg-~~~-----------------------~~~~--~~~--~~ 63 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQ-LGG-QLA-----------------------ALYP--EKH--IY 63 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCH-HHH-----------------------HTCT--TSE--EC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC-CCC-ccc-----------------------ccCC--Ccc--cc
Confidence 358999999999999999999999999999999632 221 010 0000 000 00
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+ .|.. ..+++..+...+.+.+.+ .++.++ +++|+++..+++..+.|.+.+|..+.+|.||+|||..
T Consensus 64 ~---~~~~----~~~~~~~~~~~l~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 64 D---VAGF----PEVPAIDLVESLWAQAER-YNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp C---STTC----SSEEHHHHHHHHHHHHHT-TCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred c---CCCC----CCCCHHHHHHHHHHHHHH-hCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 0 0110 013345566677777776 577874 8899999876543455777788889999999999984
No 102
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.90 E-value=1.7e-09 Score=116.50 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=38.7
Q ss_pred ccCccccccCCCCEEEEEeecCC--C-CHHHHHHHHHHHHHHHHHHhCCCCC
Q psy9395 353 NLKSSLETKQIHGLFFAGQINGT--T-GYEEAASQGLLAGLNAALFSQDRDP 401 (637)
Q Consensus 353 ~l~~tlesk~v~gLf~aGei~G~--~-Gy~eA~a~G~~AG~naa~~~~~~~~ 401 (637)
.+|++|+++..||+|++||+++. . -...|..||.+||.|++..+.+..+
T Consensus 289 ~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~ 340 (409)
T 3h8l_A 289 PTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTK 340 (409)
T ss_dssp CBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35578999789999999999763 2 3347999999999999998844443
No 103
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.89 E-value=4.5e-09 Score=113.35 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+.|.+.+++ .|+++ +++.|++|..+++++.+|.+. |.++.||.||+|+|.+
T Consensus 197 ~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 197 GIIDALETVISA-NGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHHHHHHH-TTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHH-cCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHH
Confidence 456667777776 57777 599999999998888888775 7789999999999986
No 104
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.88 E-value=5.3e-09 Score=115.75 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=85.0
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
..+||+|||||++|+++|+.|++.|.+|+|||+.. ..|. |+... .. ....+.++.++-. .. .+ .+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~-~~g~--~~~~~--~~-~~~~~~l~~~g~~--~~---~~-~~--- 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI-KFSR--HNVLH--LW-PFTIHDLRALGAK--KF---YG-RF--- 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS-SCCC--CCEEE--CC-HHHHHHHHTTTHH--HH---CT-TT---
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc-ccCC--CCccc--CC-hhHHHHHHHcCCc--cc---cc-cc---
Confidence 35899999999999999999999999999999974 3332 22111 11 1122233333211 00 00 00
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEe--CCeEEEEEE--e-cc--eEEEeceEEEecc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIK--TNKILGVVT--K-IG--IKFFSKTVILTTG 156 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~--~~~v~gV~~--~-~g--~~i~a~~VIlAtG 156 (637)
. ......++...+...+.+.+++ .++++ ++++|+++..+ ++..++|.+ . +| .++.||.||+|||
T Consensus 156 -----~--~~~~~~~~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G 227 (497)
T 2bry_A 156 -----C--TGTLDHISIRQLQLLLLKVALL-LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAG 227 (497)
T ss_dssp -----T--CTTCCEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCC
T ss_pred -----c--ccccccCCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCC
Confidence 0 0111134556778888888887 78888 58999999764 234456666 3 55 5799999999999
Q ss_pred ccc
Q psy9395 157 TFL 159 (637)
Q Consensus 157 ~~~ 159 (637)
+..
T Consensus 228 ~~S 230 (497)
T 2bry_A 228 GKF 230 (497)
T ss_dssp TTC
T ss_pred CCc
Confidence 963
No 105
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.88 E-value=5.2e-09 Score=119.40 Aligned_cols=147 Identities=15% Similarity=0.141 Sum_probs=87.6
Q ss_pred CcccEEEECcchHHHHHHHHHhh-CCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeE--
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSAR-MGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQF-- 81 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~-- 81 (637)
.++||+|||||++|+++|+.|++ .|.+|+|||+.... +...+. .++.. ...+.++.+|- ...+.. .+...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~-~~~g~a---~~l~~-~t~e~l~~lGl-~~~~~~-~~~~~~~ 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP-MELGQA---DGIAC-RTMEMFEAFEF-ADSILK-EACWIND 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC-CSSCSC---CEECH-HHHHHHHHTTC-HHHHHH-HSEEECE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC-CCCCce---eeeCH-HHHHHHHHcCc-HHHHHH-hcccccc
Confidence 45899999999999999999999 99999999997432 211111 11111 12222333331 111111 11111
Q ss_pred -eeec------cc-----cCc----hh-hhhhhccCHHHHHHHHHHHHHhcC-CeEE-EcceeEEEEEeCC---eEEEEE
Q psy9395 82 -RILN------SS-----KGA----AV-RATRAQVDRILYKQAIRFYLENQL-NLYL-FQEEVDDLIIKTN---KILGVV 139 (637)
Q Consensus 82 -~~l~------~~-----~gp----~~-~~~~~~~d~~~~~~~l~~~l~~~~-gv~i-~~~~V~~i~~~~~---~v~gV~ 139 (637)
.... +. ..+ .. ......+++..+...|.+.+.+.+ ++++ ++++|+++..+++ ..+.|.
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~ 183 (639)
T 2dkh_A 104 VTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVT 183 (639)
T ss_dssp EEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEE
T ss_pred eEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEE
Confidence 0000 00 000 00 011224677888899999998855 4577 5899999987652 233455
Q ss_pred Ee------cc--eEEEeceEEEecccc
Q psy9395 140 TK------IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 140 ~~------~g--~~i~a~~VIlAtG~~ 158 (637)
+. +| .+++||.||.|+|++
T Consensus 184 ~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 184 LERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp EEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred EEeccccCCCCeEEEEeCEEEECCCcc
Confidence 44 45 589999999999996
No 106
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.88 E-value=6.7e-09 Score=113.05 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=28.9
Q ss_pred cEEEECcchHHHHHHHHHhhCC--CcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG--QKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~~ 39 (637)
.|+|||||+||++||..|++.| .+|+|||++.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 4999999999999999999988 5799999863
No 107
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.88 E-value=7.7e-09 Score=107.99 Aligned_cols=112 Identities=25% Similarity=0.264 Sum_probs=75.0
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.++||+|||||+||++||+.|++.|++|+|+|+. ...|. |..... +
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~--~~~~~~--------------------------~----- 58 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA--LMTTTD--------------------------V----- 58 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG--GGSCSC--------------------------B-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc--eeccch--------------------------h-----
Confidence 4589999999999999999999999999999974 22222 111000 0
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEE-EEecceEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGV-VTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV-~~~~g~~i~a~~VIlAtG~~ 158 (637)
...|.+ ...++...+...+.+.+.+ .+++++...|+++.. ++. +.| .+.+|..+.+|.||+|||..
T Consensus 59 --~~~~~~---~~~~~~~~~~~~l~~~~~~-~~v~~~~~~v~~i~~-~~~-~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 59 --ENYPGF---RNGITGPELMDEMREQALR-FGADLRMEDVESVSL-HGP-LKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp --CCSTTC---TTCBCHHHHHHHHHHHHHH-TTCEEECCCEEEEEC-SSS-SEEEEETTSCEEEEEEEEECCCEE
T ss_pred --hhcCCC---CCCCCHHHHHHHHHHHHHH-cCCEEEEeeEEEEEe-CCc-EEEEEeCCCCEEEeCEEEECCCCC
Confidence 000110 0113344566666666666 688887555888875 332 335 56677889999999999985
No 108
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.85 E-value=8e-09 Score=109.01 Aligned_cols=136 Identities=14% Similarity=0.304 Sum_probs=79.4
Q ss_pred cccEEEECcchHHHHHHHHHhhCCC-cEEEEccCCCCCCccccc-CCCCccchhhHHHHHHHhccHHHHHHhhcCC-eEe
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNIDTIGQMSCN-PSIGGIGKSHLVKEIDAMGGIMAIATDKSGI-QFR 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~~~~G~~~cn-~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi-~~~ 82 (637)
+|||+|||||+||++||..|++.|+ +|+|||++. +|..-.+ +.....-... + .....++ .+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~--~Gg~~~~~~~~~~~~~~~-------~------~~~~~g~~~~~ 68 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT--VGHSFKHWPKSTRTITPS-------F------TSNGFGMPDMN 68 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS--TTHHHHTSCTTCBCSSCC-------C------CCGGGTCCCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC--CCCccccCcccccccCcc-------h------hcccCCchhhh
Confidence 4899999999999999999999999 999999973 3321101 0000000000 0 0000111 000
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.......+.+........+..+...+.+.+++ .++.++ +++|+++..+++. +.|.+.++ .+.+|.||+|||.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 69 AISMDTSPAFTFNEEHISGETYAEYLQVVANH-YELNIFENTVVTNISADDAY-YTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHH-TTCEEECSCCEEEEEECSSS-EEEEESSC-CEEEEEEEECCCSTT
T ss_pred hccccccccccccccCCCHHHHHHHHHHHHHH-cCCeEEeCCEEEEEEECCCe-EEEEeCCC-EEEeCEEEECCCCCC
Confidence 00000011111111234445666777777766 678885 7889999876544 34666665 689999999999974
No 109
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.85 E-value=8e-09 Score=107.51 Aligned_cols=143 Identities=13% Similarity=0.155 Sum_probs=75.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccC------CCCcc----chhhHHHHHHHhccHHHHHHhh
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNP------SIGGI----GKSHLVKEIDAMGGIMAIATDK 76 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~------s~gg~----~~~~l~~el~~~gg~~~~~~~~ 76 (637)
+||+|||||++|+++|+.|++.|.+|+|+|+.....|...... ..+.. ....+...++.+... .....
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 80 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ--GHVAE 80 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH--TSEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC--CCeee
Confidence 7999999999999999999999999999999754433322110 00100 011122222211100 00000
Q ss_pred cCCeEeeeccccCc-h-hhhhh--hccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEE-ece
Q psy9395 77 SGIQFRILNSSKGA-A-VRATR--AQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFF-SKT 150 (637)
Q Consensus 77 ~gi~~~~l~~~~gp-~-~~~~~--~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~-a~~ 150 (637)
..-.+......... . ....+ .......+. +.+.+ ++++ ++++|+++..+++++ .|.+.+|..+. |+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~l~~--g~~i~~~~~v~~i~~~~~~~-~v~~~~g~~~~~a~~ 153 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAIT----RAMRG--DMPVSFSCRITEVFRGEEHW-NLLDAEGQNHGPFSH 153 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHH----HHHHT--TCCEECSCCEEEEEECSSCE-EEEETTSCEEEEESE
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHH----HHHHc--cCcEEecCEEEEEEEeCCEE-EEEeCCCcCccccCE
Confidence 01111111100000 0 00000 011112222 33332 6777 499999998877654 47777886664 999
Q ss_pred EEEecccc
Q psy9395 151 VILTTGTF 158 (637)
Q Consensus 151 VIlAtG~~ 158 (637)
||+|+|..
T Consensus 154 vV~a~g~~ 161 (336)
T 1yvv_A 154 VIIATPAP 161 (336)
T ss_dssp EEECSCHH
T ss_pred EEEcCCHH
Confidence 99999985
No 110
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.83 E-value=1.1e-08 Score=105.63 Aligned_cols=111 Identities=14% Similarity=0.231 Sum_probs=73.9
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
++||+|||||+||++||+.|++.|++|+|+|+. ...|. |..+.. .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~--~~~~~~--------------------------~------ 49 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQ--LTTTTE--------------------------V------ 49 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGG--GGGCSB--------------------------C------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCce--Eecchh--------------------------h------
Confidence 489999999999999999999999999999974 22221 110000 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
...|.+ ...+....+...+.+.+.+ .++.++...|+.+..+++.+ .+ +.++..+.+|.||+|||..
T Consensus 50 -~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~-~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 50 -ENWPGD---PNDLTGPLLMERMHEHATK-FETEIIFDHINKVDLQNRPF-RL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp -CCSTTC---CSSCBHHHHHHHHHHHHHH-TTCEEECCCEEEEECSSSSE-EE-EESSCEEEEEEEEECCCEE
T ss_pred -hhCCCC---CCCCCHHHHHHHHHHHHHH-CCCEEEEeeeeEEEecCCEE-EE-EeCCCEEEcCEEEECCCCC
Confidence 000110 0012334455566666665 67888755688887655543 34 5667789999999999985
No 111
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.82 E-value=8.2e-09 Score=109.08 Aligned_cols=37 Identities=32% Similarity=0.551 Sum_probs=33.8
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
|..++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4456999999999999999999999999999999963
No 112
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.80 E-value=2.2e-08 Score=111.84 Aligned_cols=132 Identities=19% Similarity=0.231 Sum_probs=81.6
Q ss_pred cccEEEECcchHHHHHHHHHh-hCCCcEEEEccCCCCCCcccccCCCCcc--chhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 6 KFDVIVVGGGHAGTEAALVSA-RMGQKTLLLSHNIDTIGQMSCNPSIGGI--GKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA-~~G~~V~LiE~~~~~~G~~~cn~s~gg~--~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
++||+|||||+||++||+.|+ +.|.+|+|+|++....|....|...+.. ........ .+.. .......
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~--~~~~---~~~~~~~---- 78 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRF--SFDR---DLLQEST---- 78 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSC--CSCH---HHHHHCC----
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeee--cccc---ccccCCC----
Confidence 489999999999999999999 9999999999974433322111100000 00000000 0000 0000000
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCe--EE-EcceeEEEEEeCC-eEEEEEEecceEEEeceEEEecccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNL--YL-FQEEVDDLIIKTN-KILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv--~i-~~~~V~~i~~~~~-~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
......+...+...+.+.+++ .++ .+ ++++|+++..+++ ..+.|.+.+|.++.||.||+|||.+
T Consensus 79 -----------~~~~~~~~~ei~~~l~~~~~~-~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 79 -----------WKTTYITQPEILEYLEDVVDR-FDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp -----------CSBSEEEHHHHHHHHHHHHHH-TTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred -----------CcccCCCHHHHHHHHHHHHHH-cCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 001123455677777777776 455 45 6899999987654 3566888888889999999999964
No 113
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.80 E-value=2.7e-08 Score=111.27 Aligned_cols=133 Identities=17% Similarity=0.123 Sum_probs=81.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCccc--ccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMS--CNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~--cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
.++||+|||||+||+.||+.|++.|.+|+|||++....|... |-|........++.. . .+.... .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~-------~--~f~~~~-~--- 74 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYG-------Y--FALKGI-I--- 74 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHC-------H--HHHTTS-S---
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcc-------c--ccCccc-c---
Confidence 358999999999999999999999999999999754443321 112111100001100 0 000000 0
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCe--EE-EcceeEEEEEeCC-eEEEEEEecceEEEeceEEEecccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNL--YL-FQEEVDDLIIKTN-KILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv--~i-~~~~V~~i~~~~~-~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..+. ......+...+...+.+.+++. ++ .+ ++++|+++..+++ ..+.|.+.+|.++.||.||+|||.+
T Consensus 75 -----~~~~--~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 75 -----PEWE--WSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp -----TTCC--CSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred -----cCCC--ccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 0000 0111234456666777766663 43 44 5889999976543 3566888889899999999999954
No 114
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.79 E-value=1.1e-08 Score=111.80 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=35.9
Q ss_pred cccccCCCCEEEEEeec-CCCCHHHHHHHHHHHHHHHHHHhCCCC
Q psy9395 357 SLETKQIHGLFFAGQIN-GTTGYEEAASQGLLAGLNAALFSQDRD 400 (637)
Q Consensus 357 tlesk~v~gLf~aGei~-G~~Gy~eA~a~G~~AG~naa~~~~~~~ 400 (637)
+|+|. +||+|++||+. |..-..+|.++|..||.|+..++.+++
T Consensus 404 ~~~Ts-~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 404 TKMTN-MDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp TCBCS-STTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCC-CCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 48865 99999999994 454566999999999999999887754
No 115
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.79 E-value=7.2e-09 Score=108.62 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=77.8
Q ss_pred ccEEEECcchHHHHHHHHHhh---CCCcEEEEccCCCCCCcccccCC---------CCccc---hhhHHHHHHHhccHHH
Q psy9395 7 FDVIVVGGGHAGTEAALVSAR---MGQKTLLLSHNIDTIGQMSCNPS---------IGGIG---KSHLVKEIDAMGGIMA 71 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~---~G~~V~LiE~~~~~~G~~~cn~s---------~gg~~---~~~l~~el~~~gg~~~ 71 (637)
+||+|||||++|+++|+.|++ .|++|+|+|++....|.+..... .+... ....... +.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~---~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKK---HQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHH---THHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHH---HHHHHH
Confidence 699999999999999999999 99999999998544443322111 01000 0111111 111111
Q ss_pred HHHhhcCCeEeeecc------ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecce
Q psy9395 72 IATDKSGIQFRILNS------SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGI 144 (637)
Q Consensus 72 ~~~~~~gi~~~~l~~------~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~ 144 (637)
.+.+ .++...+... ......+... -....+.+.+.+. .++++ ++++|++|..+++++ .|.+.+|.
T Consensus 79 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~l~~~l~~~----~g~~i~~~~~V~~i~~~~~~~-~v~~~~g~ 150 (342)
T 3qj4_A 79 ELLA-YGVLRPLSSPIEGMVMKEGDCNFVAP--QGISSIIKHYLKE----SGAEVYFRHRVTQINLRDDKW-EVSKQTGS 150 (342)
T ss_dssp HHHH-TTSCEECCSCEETCCC--CCEEEECT--TCTTHHHHHHHHH----HTCEEESSCCEEEEEECSSSE-EEEESSSC
T ss_pred HHHh-CCCeecCchhhcceeccCCccceecC--CCHHHHHHHHHHh----cCCEEEeCCEEEEEEEcCCEE-EEEECCCC
Confidence 1211 1221111100 0000000000 0112334444333 26777 499999998877664 47777887
Q ss_pred EEEeceEEEecccc
Q psy9395 145 KFFSKTVILTTGTF 158 (637)
Q Consensus 145 ~i~a~~VIlAtG~~ 158 (637)
.+.||.||+|+...
T Consensus 151 ~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 151 PEQFDLIVLTMPVP 164 (342)
T ss_dssp CEEESEEEECSCHH
T ss_pred EEEcCEEEECCCHH
Confidence 78999999999863
No 116
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.77 E-value=2.1e-08 Score=112.17 Aligned_cols=133 Identities=16% Similarity=0.142 Sum_probs=81.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc--hhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG--KSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~--~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
.++||+|||||+||+.||+.|++.|.+|+|||++....|....|...|... ..++... .+.. .......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~--~f~~---~~~~~~~---- 90 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSY--SFSP---ELEQEWN---- 90 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSC--CSCH---HHHHHCC----
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhccc--cccc---ccccCCC----
Confidence 358999999999999999999999999999999744333221111111000 0000000 0000 0000000
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCe--EE-EcceeEEEEEeCC-eEEEEEEecceEEEeceEEEecccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNL--YL-FQEEVDDLIIKTN-KILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv--~i-~~~~V~~i~~~~~-~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
......+...+...+.+.+++ .++ .+ ++++|+++..+++ ..+.|.+.+|.++.||.||+|||.+
T Consensus 91 -----------~~~~~~~~~ei~~yl~~~~~~-~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 91 -----------WSEKYATQPEILAYLEHVADR-FDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp -----------CSSSSCBHHHHHHHHHHHHHH-TTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred -----------CccCCCCHHHHHHHHHHHHHH-cCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 001123445677777777776 454 45 5889999987654 3566888889899999999999953
No 117
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.76 E-value=4.5e-08 Score=109.46 Aligned_cols=135 Identities=17% Similarity=0.123 Sum_probs=80.5
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCccc--ccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMS--CNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~--cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
..+||+|||||++|++||+.|++.|.+|+|+|++....|... |.+.........+. .+.-. ........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~----~~~f~-~~~~~~~~---- 85 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEY----CYSFS-EEVLQEWN---- 85 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTS----SCCSC-HHHHHHCC----
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeeccccccc----ccccC-hhhhhccC----
Confidence 358999999999999999999999999999999744333221 11111000000000 00000 00000000
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcC-CeEE-EcceeEEEEEeCC-eEEEEEEecceEEEeceEEEeccccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQL-NLYL-FQEEVDDLIIKTN-KILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~-gv~i-~~~~V~~i~~~~~-~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
......+...+.+.+...+++.. +..+ ++++|+++..+++ ..+.|.+.+|.+++||.||+|||.+.
T Consensus 86 -----------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 86 -----------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp -----------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred -----------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 00112334456666666666532 2445 5889999987653 35668888888899999999999753
No 118
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.75 E-value=8.7e-08 Score=104.67 Aligned_cols=144 Identities=14% Similarity=0.077 Sum_probs=77.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCC-----CcEEEEccCCCCCCccc-ccCCCCccchh---hHHHHHHHh-ccHHHHHH
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMG-----QKTLLLSHNIDTIGQMS-CNPSIGGIGKS---HLVKEIDAM-GGIMAIAT 74 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G-----~~V~LiE~~~~~~G~~~-cn~s~gg~~~~---~l~~el~~~-gg~~~~~~ 74 (637)
.+|||+|||||+||++||..|++.| .+|+|||+.. .+|... +.......... .+....+.. .-.+..+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG-DYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS-SCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC-CCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 3589999999999999999999999 9999999974 333211 00000000000 000000000 00000011
Q ss_pred hhcCCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEe--CCeEE--EEEEecce----E
Q psy9395 75 DKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIK--TNKIL--GVVTKIGI----K 145 (637)
Q Consensus 75 ~~~gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~--~~~v~--gV~~~~g~----~ 145 (637)
...+..+.. +. .......+..+...+...+.. .++.+ ++++|+++..+ +++.+ .|.+.+|. +
T Consensus 108 ~~~~~~~~~------~~--~~~~~~~~~~~~~~l~~~~~~-~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~ 178 (463)
T 3s5w_A 108 HKHDRLVDF------IN--LGTFYPCRMEFNDYLRWVASH-FQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV 178 (463)
T ss_dssp HHTTCHHHH------HH--HCCSCCBHHHHHHHHHHHHTT-CTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEE
T ss_pred hhcCceeec------cc--ccCCCCCHHHHHHHHHHHHHH-cCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEE
Confidence 111100000 00 001112345666777666665 45666 58899999765 24443 46666664 8
Q ss_pred EEeceEEEecccc
Q psy9395 146 FFSKTVILTTGTF 158 (637)
Q Consensus 146 i~a~~VIlAtG~~ 158 (637)
+.+|.||+|||+.
T Consensus 179 ~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 179 RTTRALVVSPGGT 191 (463)
T ss_dssp EEESEEEECCCCE
T ss_pred EEeCEEEECCCCC
Confidence 9999999999984
No 119
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.73 E-value=3.9e-08 Score=106.08 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+.+.+.+++ .|+++ ++++|++|..+++++ | +.+|.++.||.||+|+|.+
T Consensus 190 ~l~~~l~~~~~~-~G~~i~~~~~V~~i~~~~~~v--V-~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 190 AVIDELERIIME-NKGKILTRKEVVEINIEEKKV--Y-TRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHHHHHHT-TTCEEESSCCEEEEETTTTEE--E-ETTCCEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHH-CCCEEEcCCeEEEEEEECCEE--E-EeCCcEEEeCEEEECCCHH
Confidence 456677777776 57788 499999998877776 5 4567799999999999985
No 120
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.71 E-value=5.6e-08 Score=103.72 Aligned_cols=143 Identities=16% Similarity=0.098 Sum_probs=79.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccc-hhhHHHHHHHhccH--HHHHHhh---cCCeE
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIG-KSHLVKEIDAMGGI--MAIATDK---SGIQF 81 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~-~~~l~~el~~~gg~--~~~~~~~---~gi~~ 81 (637)
+|+|||||++|+++|+.|++.|++|+|+|+.+. .....|. .++. ...-.+.++.++-. +..+.+. .+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~-~~~~~~G---~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~ 78 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA-ASSILPG---YGIHINSFGKQALQECLPAENWLAFEEASRYIGGQS 78 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS-SCSSCCC---CEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC-CCcCCCc---eEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcce
Confidence 699999999999999999999999999999632 2111111 0111 11223334444321 1111111 11111
Q ss_pred eeecc---------ccCc----hhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEE
Q psy9395 82 RILNS---------SKGA----AVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFF 147 (637)
Q Consensus 82 ~~l~~---------~~gp----~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~ 147 (637)
...+. ...+ ........+++..+.+.|.+.+ ...+ ++++|+++...++..+.|.+.||.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~----~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 79 RFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL----ANTIQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp EEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC----TTTEECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred eEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc----cceEEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 11110 0000 0001112345555555554332 2334 588999997654444568889999999
Q ss_pred eceEEEecccc
Q psy9395 148 SKTVILTTGTF 158 (637)
Q Consensus 148 a~~VIlAtG~~ 158 (637)
||.||.|+|..
T Consensus 155 adlvVgADG~~ 165 (412)
T 4hb9_A 155 VDVLVGADGSN 165 (412)
T ss_dssp ESEEEECCCTT
T ss_pred eeEEEECCCCC
Confidence 99999999985
No 121
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.70 E-value=1.9e-08 Score=110.54 Aligned_cols=36 Identities=33% Similarity=0.546 Sum_probs=33.0
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..+|||+|||||+||++||+.|++.|++|+|+|+..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 345999999999999999999999999999999963
No 122
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.68 E-value=5e-08 Score=106.94 Aligned_cols=139 Identities=14% Similarity=0.120 Sum_probs=79.1
Q ss_pred ccEEEECcchHHHHHHHHHhh---CCCc---EEEEccCCCCCCcccccCCCCccc-----hhhHHHHHHHhccHHHHHHh
Q psy9395 7 FDVIVVGGGHAGTEAALVSAR---MGQK---TLLLSHNIDTIGQMSCNPSIGGIG-----KSHLVKEIDAMGGIMAIATD 75 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~---~G~~---V~LiE~~~~~~G~~~cn~s~gg~~-----~~~l~~el~~~gg~~~~~~~ 75 (637)
+||+|||||+||++||..|++ .|.+ |+|+|+....+|....+...+... ...++..+.. ....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~--~~~~---- 76 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWS--NGPK---- 76 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBC--SSCG----
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhh--cCCh----
Confidence 699999999999999999999 9999 999999744433322111111000 0000000000 0000
Q ss_pred hcCCeEeeeccccCchhhh----hhhccCHHHHHHHHHHHHHhcCCeE--E-EcceeEEEEEeCC-eEEEEEEec---c-
Q psy9395 76 KSGIQFRILNSSKGAAVRA----TRAQVDRILYKQAIRFYLENQLNLY--L-FQEEVDDLIIKTN-KILGVVTKI---G- 143 (637)
Q Consensus 76 ~~gi~~~~l~~~~gp~~~~----~~~~~d~~~~~~~l~~~l~~~~gv~--i-~~~~V~~i~~~~~-~v~gV~~~~---g- 143 (637)
....+ ..+|.-.. ......+..+.+.+.+.+++ .++. + ++++|+++..+++ ..+.|.+.+ |
T Consensus 77 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~ 149 (464)
T 2xve_A 77 -ECLEF-----ADYTFDEHFGKPIASYPPREVLWDYIKGRVEK-AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT 149 (464)
T ss_dssp -GGTCB-----TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHH-HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred -hhccc-----CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHH-cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc
Confidence 00000 00010000 01234556677778877776 3565 5 5899999987654 134566654 4
Q ss_pred -eEEEeceEEEecccc
Q psy9395 144 -IKFFSKTVILTTGTF 158 (637)
Q Consensus 144 -~~i~a~~VIlAtG~~ 158 (637)
.++.+|.||+|||.+
T Consensus 150 ~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 150 IYSEEFDYVVCCTGHF 165 (464)
T ss_dssp EEEEEESEEEECCCSS
T ss_pred eEEEEcCEEEECCCCC
Confidence 578999999999964
No 123
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.67 E-value=4.3e-08 Score=105.90 Aligned_cols=38 Identities=42% Similarity=0.568 Sum_probs=33.5
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
+|||+|||||++|++||+.|++.|++|+|||+.....|
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 38999999999999999999999999999999633333
No 124
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.66 E-value=9e-09 Score=108.21 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=38.2
Q ss_pred hccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 97 AQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 97 ~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.++++..+...+.+.+++ .|++++.++|+++...+ .++||.||+|||.|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~-~Gv~i~~~~V~~i~~~~------------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTE-RGVKFFQRKVESFEEVA------------REGADVIVNCTGVWA 186 (351)
T ss_dssp EEECHHHHHHHHHHHHHH-TTCEEEECCCCCHHHHH------------HTTCSEEEECCGGGG
T ss_pred eEEcHHHHHHHHHHHHHH-CCCEEEEEEeCCHHHhh------------cCCCCEEEECCCcCh
Confidence 467888999999999987 67888667777663211 257999999999983
No 125
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.65 E-value=4.2e-08 Score=117.63 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=31.3
Q ss_pred cccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
.+||+|||||+||++||..|++.|+ +|+|+|+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 4799999999999999999999999 79999986
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.63 E-value=6.5e-07 Score=96.43 Aligned_cols=56 Identities=16% Similarity=0.065 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 102 ILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 102 ~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..+.+.+.+.+++ .|++++ ++.|+++..+++++.+|.+.+|.++.||.||+|+|..
T Consensus 194 ~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 194 EALSEFYQAEHRA-HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHHH-TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHHHHHHHHh-CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 3556667777776 789985 8999999877778888999999999999999999985
No 127
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.63 E-value=8.6e-08 Score=104.68 Aligned_cols=142 Identities=23% Similarity=0.277 Sum_probs=74.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||..|++.|++|+|+|+. ...|. |.. .+.+....+......+.. .++....|+.+....
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~--~~~-~g~~p~k~l~~~~~~~~~--~~~~~~~g~~~~~~~ 76 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGV--CLN-VGCIPSKALISASHRYEQ--AKHSEEMGIKAENVT 76 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHH--HHH-TSHHHHHHHHHHHHHHHH--HHTCGGGTEECCSCE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCc--CcC-cCchhhHHHHHHHHHHHH--HHHHHhcCcccCCCc
Confidence 489999999999999999999999999999996 33222 211 011111111111000000 011222344321000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc-eEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG-IKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g-~~i~a~~VIlAtG~~~ 159 (637)
...+.+......+ ...+...+.+.+++ .+++++...+..+ +.+. +.|.+.+| ..+.+|.+|+|||+.+
T Consensus 77 -~~~~~~~~~~~~~-~~~l~~~~~~~~~~-~gv~~~~g~~~~i--d~~~-v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 77 -IDFAKVQEWKASV-VKKLTGGVEGLLKG-NKVEIVKGEAYFV--DANT-VRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp -ECHHHHHHHHHHH-HHHHHHHHHHHHHT-TTCEEEESEEEEE--ETTE-EEEEETTEEEEEECSEEEECCCEEE
T ss_pred -cCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEEEEEEc--cCCe-EEEEeCCCcEEEEeCEEEEecCCCC
Confidence 0000000000000 01233444555655 6888875554433 4444 34666666 6899999999999853
No 128
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.62 E-value=8e-08 Score=105.28 Aligned_cols=34 Identities=32% Similarity=0.653 Sum_probs=32.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
++|||+|||||+||++||..|++.|++|+|+|++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3599999999999999999999999999999996
No 129
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.61 E-value=8.6e-08 Score=105.48 Aligned_cols=34 Identities=38% Similarity=0.686 Sum_probs=32.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||+.|++.|++|+|+|++
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4599999999999999999999999999999996
No 130
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.60 E-value=1.9e-07 Score=104.86 Aligned_cols=45 Identities=24% Similarity=0.439 Sum_probs=37.3
Q ss_pred hcCCeEEE-cceeEEEEEe----CCeEEEEEEe--cc--eEEEec-eEEEecccc
Q psy9395 114 NQLNLYLF-QEEVDDLIIK----TNKILGVVTK--IG--IKFFSK-TVILTTGTF 158 (637)
Q Consensus 114 ~~~gv~i~-~~~V~~i~~~----~~~v~gV~~~--~g--~~i~a~-~VIlAtG~~ 158 (637)
+.+|++++ ++.|++|.++ +++++||+.. +| .+++|+ -||||+|++
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~ 292 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSA 292 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCcc
Confidence 34899996 9999999998 7789999875 45 467886 599999997
No 131
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.59 E-value=1.1e-07 Score=103.98 Aligned_cols=142 Identities=19% Similarity=0.199 Sum_probs=74.5
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||+.|++.|++|+|+|+. ...|. |.. .+.+....+......+... .......++. .. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~--~~~-~g~~psk~ll~~~~~~~~~-~~~~~~~g~~-~~-~ 75 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGV--CLN-VGCIPSKALLRNAELVHIF-TKDAKAFGIS-GE-V 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHH--HHH-HSHHHHHHHHHHHHHHHHH-HHHTTTTTEE-EC-C
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCc--ccc-cCchhhHHHHHHHHHHHHH-HHHHHhcCCC-CC-C
Confidence 489999999999999999999999999999996 32222 210 0111111111111111111 0111223332 00 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc--eEEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~~ 159 (637)
....+........+ ...+...+.+.+++ .+++++...+.. .+.+. +.|.+.+| .++.+|.+|+|||+.+
T Consensus 76 ~~~~~~~~~~~~~~-~~~l~~~l~~~~~~-~gv~~~~g~~~~--id~~~-v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 76 TFDYGIAYDRSRKV-AEGRVAGVHFLMKK-NKITEIHGYGTF--ADANT-LLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp EECHHHHHHHHHHH-HHHHHHHHHHHHHH-TTCEEECEEEEE--SSSSE-EEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred ccCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEeEEEE--ecCCe-EEEEeCCCceEEEEcCEEEECCCCCC
Confidence 00000000000000 02233445556665 789987544432 34443 44666677 6899999999999853
No 132
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.59 E-value=1.6e-07 Score=102.93 Aligned_cols=144 Identities=18% Similarity=0.228 Sum_probs=73.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|||+|||||+||++||..|++.|++|+|+|+.....|. |.. .+.+....+......+. .+.......|+......
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~--~~~-~g~~psk~l~~~~~~~~-~~~~~~~~~g~~~~~~~ 77 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGT--CLN-VGCIPSKALLHATHLYH-DAHANFARYGLMGGEGV 77 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH--HHH-HSHHHHHHHHHHHHHHH-HHHHTHHHHTEECGGGC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCc--CCC-cCcHhHHHHHHHHHHHH-HHHHHHHhcCcccCCCC
Confidence 489999999999999999999999999999997333222 211 01111111111100000 01110223344310000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc--eEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~ 158 (637)
....+.+......+ ...+...+.+.+++ .+++++...+..+ +.+. +.|.+.+| ..+.+|.+|+|||+.
T Consensus 78 ~~~~~~~~~~~~~~-~~~l~~~~~~~~~~-~~v~~~~g~~~~i--~~~~-~~v~~~~G~~~~~~~d~lviAtG~~ 147 (468)
T 2qae_A 78 TMDSAKMQQQKERA-VKGLTGGVEYLFKK-NKVTYYKGEGSFE--TAHS-IRVNGLDGKQEMLETKKTIIATGSE 147 (468)
T ss_dssp EECHHHHHHHHHHH-HHHHHHHHHHHHHH-HTCEEEEEEEEEE--ETTE-EEEEETTSCEEEEEEEEEEECCCEE
T ss_pred ccCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEEEEEEe--eCCE-EEEEecCCceEEEEcCEEEECCCCC
Confidence 00000000000000 01122334445554 5788875555443 4443 34666667 789999999999984
No 133
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=2e-07 Score=102.15 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=75.1
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.+|||+|||||+||++||..|++.|++|+|+|+.....|.+. . .+.+....+......+.. +.......|+.+...
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~--~-~g~~p~k~l~~~~~~~~~-~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL--N-VGCIPSKALLHSSHMYHE-AKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH--H-HSHHHHHHHHHHHHHHHH-HHHTHHHHTEEESCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc--C-cCccchHHHHHHHHHHHH-HHHHHHhcCcccCCC
Confidence 459999999999999999999999999999999743333321 0 011101111111111100 011022334432110
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecc--eEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~~ 159 (637)
. ...+.+......+ ...+...+.+.+++ .+++++...+..+ +.+. +.|.+.+| ..+.+|.+|+|||+.+
T Consensus 81 ~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~-~gv~~~~g~~~~~--~~~~-~~v~~~~G~~~~i~~d~lIiAtGs~p 151 (470)
T 1dxl_A 81 E-IDLAAMMGQKDKA-VSNLTRGIEGLFKK-NKVTYVKGYGKFV--SPSE-ISVDTIEGENTVVKGKHIIIATGSDV 151 (470)
T ss_dssp E-ECHHHHHHHHHHH-HHHHHHHHHHHHHH-HTCEEEESCEEEE--ETTE-EEECCSSSCCEEEECSEEEECCCEEE
T ss_pred c-cCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEeEEEEe--cCCE-EEEEeCCCceEEEEcCEEEECCCCCC
Confidence 0 0001100000000 11233344455554 5788864444333 4443 34555566 6899999999999853
No 134
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.58 E-value=1e-07 Score=105.28 Aligned_cols=35 Identities=29% Similarity=0.593 Sum_probs=31.9
Q ss_pred CCCcccEEEECcchHHHHHHHHHhh-CCCcEEEEcc
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSAR-MGQKTLLLSH 37 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE~ 37 (637)
|+.+|||+|||||+||++||+.|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 4445999999999999999999999 9999999993
No 135
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.58 E-value=9.7e-08 Score=105.40 Aligned_cols=39 Identities=28% Similarity=0.382 Sum_probs=34.0
Q ss_pred cccEEEECcchHHHHHHHHHhh-CCCcEEEEccCCCCCCc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR-MGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE~~~~~~G~ 44 (637)
.+||||||||++||+||+.|++ .|++|+|+|++...+|.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 4899999999999999999998 59999999998544443
No 136
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.57 E-value=9.6e-08 Score=104.24 Aligned_cols=34 Identities=32% Similarity=0.563 Sum_probs=32.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||..|++.|++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3599999999999999999999999999999996
No 137
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.57 E-value=8.4e-08 Score=104.09 Aligned_cols=111 Identities=21% Similarity=0.160 Sum_probs=68.6
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCC--cEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSG 78 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~g 78 (637)
|+|. +||+|||||+||++||..|++.|. +|+|+|+... .....|..+.. + +. +
T Consensus 1 M~~~--~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~-~~~~~~~l~~~------~------~~----------~ 55 (431)
T 1q1r_A 1 MNAN--DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV-IPHHLPPLSKA------Y------LA----------G 55 (431)
T ss_dssp -CCS--CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS-CCBCSGGGGTT------T------TT----------T
T ss_pred CCCC--CcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC-CCCcCCCCcHH------H------hC----------C
Confidence 6554 899999999999999999999998 7999998631 11111100000 0 00 0
Q ss_pred CeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccc
Q psy9395 79 IQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGT 157 (637)
Q Consensus 79 i~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~ 157 (637)
. ..+. . .... ..+.+++ .+++++ ++.|+.+..++. .|.+.+|..+.+|.+|+|||+
T Consensus 56 ~--------~~~~--~--~~~~-------~~~~~~~-~gv~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 56 K--------ATAE--S--LYLR-------TPDAYAA-QNIQLLGGTQVTAINRDRQ---QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp C--------SCSG--G--GBSS-------CHHHHHH-TTEEEECSCCEEEEETTTT---EEEETTSCEEECSEEEECCCE
T ss_pred C--------CChH--H--hccc-------CHHHHHh-CCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEcCCC
Confidence 0 0000 0 0000 0122233 688886 778999876544 356677888999999999998
Q ss_pred cc
Q psy9395 158 FL 159 (637)
Q Consensus 158 ~~ 159 (637)
.+
T Consensus 113 ~p 114 (431)
T 1q1r_A 113 RP 114 (431)
T ss_dssp EE
T ss_pred Cc
Confidence 53
No 138
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.56 E-value=1.1e-07 Score=104.44 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=73.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCccc---ccCCCCccchhhHHHHHHHhccHHH-HHHhhcCCeE
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMS---CNPSIGGIGKSHLVKEIDAMGGIMA-IATDKSGIQF 81 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~---cn~s~gg~~~~~l~~el~~~gg~~~-~~~~~~gi~~ 81 (637)
+|||+|||||+||++||..|++.|++|+|||++....|.+. |.|+ ..+......+.. +. ..+...|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Ps------k~l~~~~~~~~~-~~~~~~~~~g~~~ 78 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPS------KALLNNSHYYHM-AHGTDFASRGIEM 78 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHH------HHHHHHHHHHHH-HHSSHHHHTTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccch------HHHHHHHHHHHH-hhhhhHhhCcccc
Confidence 48999999999999999999999999999999743332211 2221 111111110000 00 0122334431
Q ss_pred eeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEec-c-eEEEeceEEEecccc
Q psy9395 82 RILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKI-G-IKFFSKTVILTTGTF 158 (637)
Q Consensus 82 ~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~-g-~~i~a~~VIlAtG~~ 158 (637)
.... ...+.+......+ ...+...+.+.+++ .+++++...+..+ +.+. +.|.+.+ + .++.+|.||+|||+.
T Consensus 79 ~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~-~gv~~~~g~~~~~--~~~~-~~v~~~~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 79 SEVR-LNLDKMMEQKSTA-VKALTGGIAHLFKQ-NKVVHVNGYGKIT--GKNQ-VTATKADGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp SCEE-ECHHHHHHHHHHH-HHHHHHHHHHHHHH-TTCEEEESEEEEE--ETTE-EEEECTTSCEEEEEEEEEEECCCEE
T ss_pred CCCc-cCHHHHHHHHHHH-HHHHHHHHHHHHHh-CCCEEEEEEEEEe--cCCE-EEEEecCCCcEEEEeCEEEECCCCC
Confidence 1000 0000000000000 01122233455554 6888875555443 4443 3455555 4 579999999999985
No 139
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.56 E-value=1.1e-07 Score=103.48 Aligned_cols=38 Identities=26% Similarity=0.346 Sum_probs=33.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCC------CcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMG------QKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G------~~V~LiE~~~~~~G 43 (637)
++||+|||||++|++||+.|++.| ++|+|+|+....+|
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 489999999999999999999999 99999999743333
No 140
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.54 E-value=5.6e-07 Score=102.98 Aligned_cols=120 Identities=14% Similarity=0.169 Sum_probs=68.2
Q ss_pred cccEEEECcchHHHHHHHHHhh-----CCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR-----MGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ 80 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~-----~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~ 80 (637)
++||+|||||++|+++|+.|++ .|.+|+|||+....... +...++.. .-.+-++.+|- ...+.. .+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~----gra~~l~~-~tle~l~~lGl-~~~l~~-~~~~ 80 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN----GQADGLQC-RTLESLKNLGL-ADKILS-EAND 80 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCS----CSCCEECH-HHHHHHHTTTC-HHHHHT-TCBC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCC----CceeEECh-HHHHHHHHCCC-HHHHHH-hccc
Confidence 5899999999999999999999 99999999986322111 00111111 12233344432 111111 1111
Q ss_pred ---Eeeeccc-cC------------chhh-hhhhccCHHHHHHHHHHHHHhcC--CeEE-EcceeEEEEEeC
Q psy9395 81 ---FRILNSS-KG------------AAVR-ATRAQVDRILYKQAIRFYLENQL--NLYL-FQEEVDDLIIKT 132 (637)
Q Consensus 81 ---~~~l~~~-~g------------p~~~-~~~~~~d~~~~~~~l~~~l~~~~--gv~i-~~~~V~~i~~~~ 132 (637)
+...+.. .+ +... .....+++..+...|.+.+.+.+ ++++ ++++|+++..++
T Consensus 81 ~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 81 MSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp CCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred cceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 1111100 00 0000 11224677788888888888754 4777 488999998764
No 141
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.54 E-value=6.1e-08 Score=95.52 Aligned_cols=37 Identities=24% Similarity=0.388 Sum_probs=33.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
+||+|||||+||++||+.|++.|++|+|+|+.....|
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 7999999999999999999999999999999754433
No 142
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.52 E-value=2.2e-07 Score=101.79 Aligned_cols=34 Identities=35% Similarity=0.609 Sum_probs=32.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
+|||+|||||+||++||..|++.|++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5999999999999999999999999999999963
No 143
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.51 E-value=2.1e-07 Score=101.65 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEE-eCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLII-KTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~-~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+.+.+.++. .|+++ +++.|++|.. +++++++|.+.+|+++.||.||.|+|-+
T Consensus 257 ~L~~aL~r~~~~-~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAI-NGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHH-C--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHH-cCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 456777788877 56666 5999999998 6788999999998899999999999875
No 144
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.51 E-value=2.6e-07 Score=101.88 Aligned_cols=31 Identities=26% Similarity=0.567 Sum_probs=30.2
Q ss_pred cccEEEECcchHHHHHHHHHhh-CCCcEEEEc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR-MGQKTLLLS 36 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE 36 (637)
+|||+|||||+||++||+.|++ .|++|+|+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 4899999999999999999999 999999999
No 145
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.49 E-value=3e-07 Score=102.07 Aligned_cols=39 Identities=36% Similarity=0.488 Sum_probs=34.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
.++||+|||||+||++||+.|++.|++|+|+|++...+|
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 348999999999999999999999999999999844333
No 146
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.48 E-value=8.3e-07 Score=99.61 Aligned_cols=36 Identities=36% Similarity=0.530 Sum_probs=32.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCC-CcEEEEccCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMG-QKTLLLSHNID 40 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~~~ 40 (637)
..||+||||||.|||.+|..|++.| .+|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4599999999999999999999988 79999999754
No 147
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.47 E-value=1.8e-07 Score=101.97 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=62.8
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+||+|||||+||++||..|++. |.+|+|+|+.. ..+...|.... + +.+.
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~-~~~~~~~~~p~-------~------~~~~--------------- 54 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE-WVSHAPCGIPY-------V------VEGL--------------- 54 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS-CCC-----------------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC-ccccCCcCCcc-------c------cCCC---------------
Confidence 7999999999999999999997 88999999973 22222221000 0 0000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecc-eEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIG-IKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g-~~i~a~~VIlAtG~~ 158 (637)
.+...+.....+.+.+..+++++ +++|+++..+. ..|.+.++ ..+.+|.+|+|||+.
T Consensus 55 --------------~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~---~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 55 --------------STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGY---VRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp -------------------------CTHHHHTTCEEETTCEEEEECSSE---EEEECSSSEEEEECSEEEECCCEE
T ss_pred --------------CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCC---CEEEECCceEEEEcCEEEECCCCC
Confidence 00001111111222122788886 67998885322 33555666 489999999999985
No 148
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.47 E-value=1.9e-07 Score=101.91 Aligned_cols=109 Identities=18% Similarity=0.235 Sum_probs=66.4
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+||+|||||+||++||..|++. |.+|+|||++. ..|..+|.... .+.+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~-~~g~~~~~~~~-------------~~~~~~-------------- 54 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA-TVGYLSGGLSA-------------YFNHTI-------------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS-CCSSCCC-------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC-CCcccCccchh-------------hhcCCC--------------
Confidence 5899999999999999999998 99999999973 33322221100 000000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEE-EecceEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVV-TKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~-~~~g~~i~a~~VIlAtG~~~ 159 (637)
+. .. .+.....+.+.+ .++.+ ++++|+++..++..+ .+. ..++..+.+|.+|+|||+..
T Consensus 55 -----~~---~~------~~~~~~~~~~~~-~gi~~~~~~~V~~id~~~~~v-~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 55 -----NE---LH------EARYITEEELRR-QKIQLLLNREVVAMDVENQLI-AWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp --------------------CCCCHHHHHH-TTEEEECSCEEEEEETTTTEE-EEEETTEEEEEECSEEEECCCCCB
T ss_pred -----CC---HH------HhhcCCHHHHHH-CCCEEEECCEEEEEECCCCEE-EEEecCceEEEEcCEEEECCCccc
Confidence 00 00 000001112223 67888 488999998766543 232 12456899999999999853
No 149
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.46 E-value=2.7e-07 Score=102.62 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=33.3
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..++||+|||||+||++||+.|++.|++|+|||++.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 346999999999999999999999999999999973
No 150
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=1.8e-07 Score=102.18 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=32.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
+|||+|||||+||++||..|++.|++|+|+|++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3899999999999999999999999999999973
No 151
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.44 E-value=2.4e-07 Score=101.69 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=30.7
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~ 39 (637)
+||+|||||+||++||..|++. |.+|+|||++.
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 6999999999999999999998 99999999973
No 152
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.44 E-value=2.4e-07 Score=101.39 Aligned_cols=53 Identities=15% Similarity=0.040 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 104 YKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 104 ~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+.+.+.+.+.+ .|+++ +++.|++|..++++++.|.+ ++.++.||.||+|++.+
T Consensus 236 l~~~l~~~l~~-~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 236 LPQALETHLTS-RGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHH-TTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHh-cCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 55666666766 47788 59999999877665455655 45589999999999985
No 153
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.43 E-value=1e-07 Score=103.35 Aligned_cols=50 Identities=6% Similarity=-0.001 Sum_probs=41.4
Q ss_pred ccCccccccCCCCEEEEEeecCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCC
Q psy9395 353 NLKSSLETKQIHGLFFAGQINGTTG-------------YEEAASQGLLAGLNAALFSQDRDPW 402 (637)
Q Consensus 353 ~l~~tlesk~v~gLf~aGei~G~~G-------------y~eA~a~G~~AG~naa~~~~~~~~~ 402 (637)
.+|++|++..+||+|++||+++..+ -..|..||..||.|++..+.|+++.
T Consensus 276 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~ 338 (430)
T 3h28_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4567899988999999999966432 2379999999999999999998764
No 154
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.42 E-value=1.9e-07 Score=102.97 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=66.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCC---CcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMG---QKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G---~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
+||+|||||+||+.||..|++.| .+|+|||+.. ..+...|. +. .+. .+. +
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~-~~~~~~~~----------~~-----------~~~--~~~-~-- 88 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS-NISFLGAG----------MA-----------LWI--GEQ-I-- 88 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS-CCSBCGGG----------HH-----------HHH--TTS-S--
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC-CCCccccc----------cc-----------hhh--cCc-c--
Confidence 89999999999999999999988 9999999863 23333331 00 000 000 0
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec--ceEEEeceEEEeccccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI--GIKFFSKTVILTTGTFL 159 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~--g~~i~a~~VIlAtG~~~ 159 (637)
..+. .. ... ..+.+.+ .+++++ +++|+.+..+++.+ .+.. + +.++.+|.+|+|||+.+
T Consensus 89 ----~~~~--~~--~~~-------~~~~~~~-~gv~v~~~~~v~~i~~~~~~v-~v~~-~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 89 ----AGPE--GL--FYS-------DKEELES-LGAKVYMESPVQSIDYDAKTV-TALV-DGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp ----SCSG--GG--BSC-------CHHHHHH-TTCEEETTCCEEEEETTTTEE-EEEE-TTEEEEEECSEEEECCCEEE
T ss_pred ----CCHH--Hh--hhc-------CHHHHHh-CCCEEEeCCEEEEEECCCCEE-EEEe-CCcEEEEECCEEEECCCCCc
Confidence 0000 00 000 0112223 678884 88899987655543 2321 3 35799999999999853
No 155
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.42 E-value=2.5e-07 Score=101.83 Aligned_cols=111 Identities=18% Similarity=0.236 Sum_probs=67.0
Q ss_pred cccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
++||+|||||+||++||..|++. |.+|+|||+.. ..+...|. +.. +. .+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~-~~~~~~~~----------~~~-----------~~--~~~~--- 88 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE-IYSYAQCG----------LPY-----------VI--SGAI--- 88 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS-CCSBCGGG----------HHH-----------HH--TTSS---
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC-CCCCCCCC----------cch-----------hh--cCCc---
Confidence 46999999999999999999996 89999999963 33222221 000 00 0000
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEE-ecce--EEEeceEEEeccccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVT-KIGI--KFFSKTVILTTGTFL 159 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~-~~g~--~i~a~~VIlAtG~~~ 159 (637)
+. ...... ...+.+.+..+++++ +++|+.+..+++.+. +.. .+|. ++.+|.+|+|||+..
T Consensus 89 ------~~---~~~l~~------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~-v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 89 ------AS---TEKLIA------RNVKTFRDKYGIDAKVRHEVTKVDTEKKIVY-AEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp ------SC---GGGGBS------SCHHHHHHTTCCEEESSEEEEEEETTTTEEE-EEETTTCCEEEEECSEEEECCCEEE
T ss_pred ------CC---HHHhhh------cCHHHHHhhcCCEEEeCCEEEEEECCCCEEE-EEEcCCCceEEEEcCEEEECCCCcc
Confidence 00 000000 011222233588886 688998876555432 333 2355 799999999999853
No 156
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=4.6e-07 Score=99.04 Aligned_cols=33 Identities=27% Similarity=0.579 Sum_probs=31.5
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
+|||+|||||+||++||..|++.|++|+|+|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 489999999999999999999999999999993
No 157
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.41 E-value=1e-06 Score=97.82 Aligned_cols=51 Identities=16% Similarity=0.295 Sum_probs=40.8
Q ss_pred HHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecc---eEEEeceEEEecccc
Q psy9395 108 IRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIG---IKFFSKTVILTTGTF 158 (637)
Q Consensus 108 l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g---~~i~a~~VIlAtG~~ 158 (637)
+...++..+|+.++ ++.|..+..+++++.+|...+. ..+.|+.||||+|+.
T Consensus 216 ~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 216 LTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGAL 270 (526)
T ss_dssp SCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHH
T ss_pred ccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEccccc
Confidence 33445556899996 8999999999999998886542 478899999999996
No 158
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=2.8e-07 Score=101.99 Aligned_cols=32 Identities=41% Similarity=0.681 Sum_probs=31.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|||+|||||+||++||..|++.|++|+|+|++
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 34 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKS 34 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 89999999999999999999999999999996
No 159
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.40 E-value=2.7e-07 Score=101.06 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=34.2
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
...+||+|||||++|++||+.|++.|++|+|+|++...+|.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 34589999999999999999999999999999998544443
No 160
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.39 E-value=3e-07 Score=103.80 Aligned_cols=110 Identities=19% Similarity=0.285 Sum_probs=67.6
Q ss_pred cccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
+.||+|||||+||++||+.|++. |.+|+|+|+.. ..+-..|. +.. .+++ .
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~-~~~~~~~~----------lp~---~~~g----------~---- 87 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE-YISFANCG----------LPY---YIGG----------V---- 87 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS-CSSBCGGG----------HHH---HHTT----------S----
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC-CccccCCC----------Cch---hhcC----------c----
Confidence 36999999999999999999998 89999999973 22211110 000 0000 0
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEE-ecce--EEEeceEEEecccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVT-KIGI--KFFSKTVILTTGTF 158 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~-~~g~--~i~a~~VIlAtG~~ 158 (637)
....... +...+....+. .++.+ ++++|+++..++..+. +.. .+|. .+.+|.+|+|||+.
T Consensus 88 --------~~~~~~~-----~~~~~~~~~~~-~gi~v~~~~~V~~id~~~~~v~-v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 88 --------ITERQKL-----LVQTVERMSKR-FNLDIRVLSEVVKINKEEKTIT-IKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp --------SCCGGGG-----BSSCHHHHHHH-TTCEEECSEEEEEEETTTTEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred --------CCChHHh-----hccCHHHHHHh-cCcEEEECCEEEEEECCCCEEE-EeecCCCCEEEEeCCEEEECCCCC
Confidence 0000000 11112222222 67888 5899999987666543 332 3454 78999999999984
No 161
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.39 E-value=7.9e-07 Score=100.53 Aligned_cols=34 Identities=38% Similarity=0.626 Sum_probs=31.9
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|||+|||||+||++||..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4589999999999999999999999999999973
No 162
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.38 E-value=3.2e-07 Score=100.03 Aligned_cols=111 Identities=23% Similarity=0.192 Sum_probs=66.6
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+||+|||||+||++||..|++. |++|+|+|+.. ..+...|. +.. .+++ . +...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~-~~~~~~~~----------~~~---~~~g----------~-~~~~ 55 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND-NISFLSCG----------IAL---YLGK----------E-IKNN 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS-CCCBCGGG----------HHH---HHTT----------C-BGGG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC-CCCccccc----------chh---hhcC----------C-cccC
Confidence 5899999999999999999998 99999999963 23322221 000 0000 0 0000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEE-ec--ceEEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVT-KI--GIKFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~-~~--g~~i~a~~VIlAtG~~~ 159 (637)
.+. . .... +.+.+.+ .++++ ++++|..+..+++.+. +.. .+ +..+.+|.+|+|||+.+
T Consensus 56 ----~~~--~--~~~~-------~~~~~~~-~gv~~~~~~~v~~i~~~~~~v~-v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 56 ----DPR--G--LFYS-------SPEELSN-LGANVQMRHQVTNVDPETKTIK-VKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp ----CGG--G--GBSC-------CHHHHHH-TTCEEEESEEEEEEEGGGTEEE-EEETTTCCEEEEECSEEEECCCEEE
T ss_pred ----CHH--H--hhhc-------CHHHHHH-cCCEEEeCCEEEEEEcCCCEEE-EEecCCCceEEEECCEEEEccCCCc
Confidence 000 0 0000 1122233 67888 5788998876665432 322 11 46899999999999853
No 163
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.6e-07 Score=96.92 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.||+|||||+||++||..|++.| +|+|+|+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~ 39 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE 39 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECC
Confidence 59999999999999999999999 99999986
No 164
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.36 E-value=1.1e-06 Score=99.67 Aligned_cols=36 Identities=28% Similarity=0.355 Sum_probs=32.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNID 40 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~ 40 (637)
..|||+|||||+||+.||+.|++.|++|+|||+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 459999999999999999999999999999999743
No 165
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.36 E-value=1.1e-06 Score=96.60 Aligned_cols=55 Identities=15% Similarity=0.093 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+.+.+.+.+.+++++. +++|++|..+++++ .|.+.+|.+++||.||+|+|..
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAA-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSE-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEE-EEEECCCCEEEcCEEEECCCHH
Confidence 4556666777663338784 99999998776654 4777788889999999999985
No 166
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.36 E-value=8.3e-07 Score=97.10 Aligned_cols=38 Identities=29% Similarity=0.334 Sum_probs=33.6
Q ss_pred cccEEEECcchHHHHHHHHHhhCC--CcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMG--QKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~~~~~G 43 (637)
++||+|||||++|++||+.|++.| ++|+|+|+.....|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 379999999999999999999999 99999999744334
No 167
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.36 E-value=1.6e-07 Score=101.94 Aligned_cols=103 Identities=23% Similarity=0.330 Sum_probs=66.5
Q ss_pred cEEEECcchHHHHHHHHHhhCC--CcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG--QKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
.|+|||||+||++||..|++.+ ++|+|||++.. .. +.| +...+ ..+. .+...+.+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~-~~---~~p---------~l~~v--~~g~----~~~~~i~~---- 60 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY-FG---FTP---------AFPHL--AMGW----RKFEDISV---- 60 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE-EE---CGG---------GHHHH--HHTC----SCGGGSEE----
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC-Cc---cCc---------cHHHH--hcCC----CCHHHhhh----
Confidence 6999999999999999999865 78999998631 10 001 00000 0000 00000100
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| +.+.+++ .+++++.++|++|..++.. |.+.+|+++.+|.+|+|||+.
T Consensus 61 ----~-----------------~~~~~~~-~gv~~i~~~v~~Id~~~~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 61 ----P-----------------LAPLLPK-FNIEFINEKAESIDPDANT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ----E-----------------STTTGGG-GTEEEECSCEEEEETTTTE---EEETTCCEEECSEEEECCCCE
T ss_pred ----c-----------------HHHHHHH-CCcEEEEeEEEEEECCCCE---EEECCCCEEECCEEEEeCCCC
Confidence 0 0111222 5899998899999876654 678888999999999999984
No 168
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.34 E-value=4.4e-07 Score=98.81 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=66.1
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+||+|||||+||+.||..|++. |++|+|||+.. ..+...|. +. . +. .+. +
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~-~~~~~~~~----------~~----------~-~~--~~~-~--- 52 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD-FISFLSAG----------MQ----------L-YL--EGK-V--- 52 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS-SSSBCGGG----------HH----------H-HH--TTS-S---
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC-ccCccccc----------ch----------h-hh--cCc-c---
Confidence 3899999999999999999997 99999999963 33333331 00 0 00 000 0
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEE-ecce--EEEeceEEEeccccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVT-KIGI--KFFSKTVILTTGTFL 159 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~-~~g~--~i~a~~VIlAtG~~~ 159 (637)
..+. .. .. .+.+.+.+ .++++ .++.|+.+..+++.+. +.. .+|. ++.+|.+|+|||+.+
T Consensus 53 ---~~~~--~~--~~-------~~~~~~~~-~gv~~~~~~~v~~i~~~~~~v~-~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 53 ---KDVN--SV--RY-------MTGEKMES-RGVNVFSNTEITAIQPKEHQVT-VKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ---CCGG--GS--BS-------CCHHHHHH-TTCEEEETEEEEEEETTTTEEE-EEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---CCHH--Hh--hc-------CCHHHHHH-CCCEEEECCEEEEEeCCCCEEE-EEecCCCceEEEeCCEEEEcCCCCc
Confidence 0000 00 00 01122233 57888 5888988876655432 322 2353 489999999999853
No 169
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.33 E-value=3.6e-07 Score=102.47 Aligned_cols=33 Identities=18% Similarity=0.418 Sum_probs=30.6
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~ 39 (637)
.||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4899999999999999999998 89999999973
No 170
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.33 E-value=7.9e-07 Score=95.42 Aligned_cols=106 Identities=16% Similarity=0.185 Sum_probs=66.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.||+|||||+||++||..|++.|. +|+|+|+....... .+..+ +. .+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~-~~~l~-----~~-------~l~~---------------- 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ-RPPLS-----KA-------YLKS---------------- 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC-SGGGG-----TG-------GGGS----------------
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC-CccCC-----HH-------HHCC----------------
Confidence 589999999999999999999998 89999996321111 00000 00 0000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
...+. ..... ..+.+.+ .++++..++|+.+..+... |.+.+|..+.+|.+|+|||+.
T Consensus 53 --~~~~~----~~~~~-------~~~~~~~-~~i~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 53 --GGDPN----SLMFR-------PEKFFQD-QAIELISDRMVSIDREGRK---LLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp --CCCTT----SSBSS-------CHHHHHH-TTEEEECCCEEEEETTTTE---EEESSSCEEECSEEEECCCEE
T ss_pred --CCCHH----HccCC-------CHHHHHh-CCCEEEEEEEEEEECCCCE---EEECCCCEEECCEEEEeeCCC
Confidence 00000 00000 0111222 6888866889998765543 667788899999999999984
No 171
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.33 E-value=8.9e-07 Score=97.70 Aligned_cols=109 Identities=24% Similarity=0.236 Sum_probs=68.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
++||+|||||+||++||+.|++. ++|+|+|++....|... ..+.. ..++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~-~~~~~-----------------------~~g~------ 156 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW-LKGIK-----------------------QEGF------ 156 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG-GTCSE-----------------------ETTT------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee-ccccc-----------------------cCCC------
Confidence 47999999999999999999999 99999999743222211 00000 0000
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecce--EEEeceEEEeccccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGI--KFFSKTVILTTGTFL 159 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~--~i~a~~VIlAtG~~~ 159 (637)
+. +...+...+.+.+ ..+++++ ++.|.++..++..+......++. .+.+|.+|+|||+..
T Consensus 157 ----~~--------~~~~~~~~l~~~l--~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 157 ----NK--------DSRKVVEELVGKL--NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ----TE--------EHHHHHHHHHHTC--CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred ----CC--------CHHHHHHHHHHHH--hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 00 1122333333333 3688874 88888887665544323334453 789999999999853
No 172
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.32 E-value=2.7e-06 Score=101.37 Aligned_cols=34 Identities=41% Similarity=0.617 Sum_probs=32.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|||+|||||+||++||..|++.|++|+|||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 173
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.31 E-value=7e-08 Score=102.78 Aligned_cols=136 Identities=12% Similarity=-0.008 Sum_probs=73.1
Q ss_pred cEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHh-cc-HHHHHHhhcCCeEee
Q psy9395 8 DVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAM-GG-IMAIATDKSGIQFRI 83 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~-gg-~~~~~~~~~gi~~~~ 83 (637)
||+|||||++|+++|+.|++. |.+|+|+|++.. .....|.....+.+..... ....+ .. ..........+.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~-~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE-QEVLGWGVVLPGRPGQHPA-NPLSYLDAPERLNPQFLEDFKLVH 79 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT-TCCCCSEEEEESCTTTCTT-CGGGGSSCGGGGCCEEECCEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC-CCcceeEEEeCcHHHHhhc-CcchhhhhhHHHhhccccceEEEe
Confidence 899999999999999999999 999999999743 2111111111110000000 00000 00 000000000111111
Q ss_pred eccccCchh-hhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 84 LNSSKGAAV-RATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 84 l~~~~gp~~-~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
.+...+.. ..+...+++..+.+.|.+.+.+ .++++. +++|+++... .++.||.||.|+|.++
T Consensus 80 -~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 80 -HNEPSLMSTGVLLCGVERRGLVHALRDKCRS-QGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNH 143 (381)
T ss_dssp -SSSEEECCCCSCEEEEEHHHHHHHHHHHHHH-TTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGG
T ss_pred -CCeeEEecCCCceeeecHHHHHHHHHHHHHH-CCCEEEeCCEeccchhc------------ccccCCEEEECCCCCc
Confidence 00000000 0011246777888999998887 488885 8888776421 1256899999999973
No 174
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.30 E-value=1e-06 Score=93.90 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=65.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCC--CcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMG--QKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
+|||+|||||+||++||..|++.| .+|+|+|++. .|.++...... . +
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~------g~~~~~~~l~~------------~---------~---- 52 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD------GRSYSKPMLST------------G---------F---- 52 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC------CCEECGGGGGG------------T---------T----
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC------CCccCcccccH------------H---------H----
Confidence 489999999999999999999999 5699999862 12221110000 0 0
Q ss_pred eccccCchhhhhhhccCHHHHHH-HHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQ-AIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~-~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
+. ......+.. .+.+.+++ .+++++ +++|+.+..++.. |.+. +..+.+|.+|+|||+..
T Consensus 53 ------~~------~~~~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~-~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 53 ------SK------NKDADGLAMAEPGAMAEQ-LNARILTHTRVTGIDPGHQR---IWIG-EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp ------TT------TCCHHHHEEECHHHHHHH-TTCEEECSCCCCEEEGGGTE---EEET-TEEEECSEEEECCCEEE
T ss_pred ------hC------CCCHHHhhccCHHHHHHh-CCcEEEeCCEEEEEECCCCE---EEEC-CcEEECCEEEEeCCCCc
Confidence 00 000111110 11222233 678886 7788888755443 3444 34799999999999853
No 175
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.25 E-value=9e-07 Score=95.25 Aligned_cols=105 Identities=15% Similarity=0.237 Sum_probs=66.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCc--EEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQK--TLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~--V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
.||+|||||+||++||..|++.|.+ |+|+|+....... .+ .+... .+. ....
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~-~~----------~l~~~------~~~-----g~~~---- 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD-RP----------SLSKA------VLD-----GSLE---- 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC-SG----------GGGTH------HHH-----TSSS----
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC-Cc----------cccHH------HhC-----CCCC----
Confidence 4899999999999999999999988 9999986322111 00 00000 000 0000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. .. ... .+.+.+ .+++++ +++|+.+..+... |.+.+|..+.+|.+|+|||+.
T Consensus 57 -----~~--~~---~~~-------~~~~~~-~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 57 -----RP--PI---LAE-------ADWYGE-ARIDMLTGPEVTALDVQTRT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp -----SC--CB---SSC-------TTHHHH-TTCEEEESCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred -----HH--Hh---cCC-------HHHHHH-CCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEccCCc
Confidence 00 00 000 011122 688885 6799998765543 667788899999999999985
No 176
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.25 E-value=1.5e-06 Score=97.24 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.8
Q ss_pred cccEEEECcchHHHHHHHHHhh-CCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR-MGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE~~~ 39 (637)
.||+||||||.|||.+|..|++ .|.+|+|||++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 4999999999999999999999 799999999874
No 177
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.24 E-value=8e-07 Score=95.61 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=66.4
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCC--cEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
..+||+|||||+||++||..|++.|. +|+|+|+.. ..+...|..+ + .+.. . . .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~-~~~~~~~~~~-----~-~~~~---------~-----~-~--- 60 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA-ERPYDRPPLS-----K-DFMA---------H-----G-D--- 60 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC-SCCBCSGGGG-----T-HHHH---------H-----C-C---
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC-CCcccCCCCC-----H-HHhC---------C-----C-c---
Confidence 35899999999999999999999998 599999863 2221111100 0 0000 0 0 0
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. ...+. .+. ..+++++ +++|+.+..+... |.+.+|..+.+|.+|+|||+.
T Consensus 61 -------~~----~~~~~----------~~~-~~~v~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 61 -------AE----KIRLD----------CKR-APEVEWLLGVTAQSFDPQAHT---VALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp -------GG----GSBCC----------CTT-SCSCEEEETCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred -------hh----hhhHH----------HHH-HCCCEEEcCCEEEEEECCCCE---EEECCCCEEECCEEEECCCCC
Confidence 00 00011 112 2678885 6679998754433 566778889999999999985
No 178
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.20 E-value=9.1e-06 Score=87.10 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=76.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~------------------------------------------ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR------------------------------------------ 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh------------------------------------------
Confidence 36999999999999999999999999999986311100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..+ ..+.+.+.+.+++ .|++++ ++.|.++..+++++.+|.+.+|.++.||.||+|+|..
T Consensus 181 -----------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 181 -----------VVT-PEISSYFHDRHSG-AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp -----------TSC-HHHHHHHHHHHHH-TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred -----------ccC-HHHHHHHHHHHHh-CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 001 1234455566665 789985 8899999888888888999999999999999999984
No 179
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.16 E-value=5.4e-06 Score=92.61 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=38.2
Q ss_pred HHhcCCeEEE-cceeEEEEEeC-CeEEEEEEec---c--eEEEec-eEEEecccc
Q psy9395 112 LENQLNLYLF-QEEVDDLIIKT-NKILGVVTKI---G--IKFFSK-TVILTTGTF 158 (637)
Q Consensus 112 l~~~~gv~i~-~~~V~~i~~~~-~~v~gV~~~~---g--~~i~a~-~VIlAtG~~ 158 (637)
+.+..|++++ ++.|++|..++ +++.||.+.+ | .+++|+ .||+|+|++
T Consensus 218 a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 218 IVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp GTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3334789996 99999999887 7899998754 4 378998 999999996
No 180
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.16 E-value=1e-05 Score=93.82 Aligned_cols=38 Identities=32% Similarity=0.370 Sum_probs=33.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
.+||+|||||++|++||+.|++.|++|+|+|+.....|
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999743333
No 181
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.15 E-value=1.3e-06 Score=94.56 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=31.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 799999999999999999999999999999863
No 182
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.14 E-value=1.9e-06 Score=95.02 Aligned_cols=130 Identities=17% Similarity=0.119 Sum_probs=70.4
Q ss_pred CcccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCe--
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQ-- 80 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~-- 80 (637)
.++||+|||||+||++||..|++. |.+|+|||+.. ..+-.+|.++..-..... ... .......+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~-~~~y~r~~lsk~l~~~~~--------~~~-~~~~~~~~~~~~ 79 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP-ELPYMRPPLSKELWFSDD--------PNV-TKTLRFKQWNGK 79 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS-SCCBCSGGGGTGGGCC----------CTH-HHHCEEECTTSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC-CCCCCCCCCCHHhhcCCc--------cch-hhcccccccccc
Confidence 458999999999999999988876 89999999973 333333322211000000 000 0000000000
Q ss_pred EeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEeccccc
Q psy9395 81 FRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFL 159 (637)
Q Consensus 81 ~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~~ 159 (637)
...+. ..|. ....+...+. + +. ..+++++ +++|+.+..++.. |.+.+|.++.+|.+|+|||+.+
T Consensus 80 ~~~~~--~~~~----~~~~~~~~l~----~-~~-~~gv~~~~g~~v~~id~~~~~---V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 80 ERSIY--FQPP----SFYVSAQDLP----H-IE-NGGVAVLTGKKVVQLDVRDNM---VKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp EEESB--SSCG----GGSBCTTTTT----T-ST-TCEEEEEETCCEEEEEGGGTE---EEETTSCEEEEEEEEECCCEEE
T ss_pred ccccc--ccch----Hhhcchhhhh----h-hh-cCCeEEEcCCEEEEEECCCCE---EEECCCCEEECCEEEECCCCCC
Confidence 00000 0000 0001100010 0 11 2578885 6799998765543 6677888899999999999853
No 183
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.14 E-value=1.4e-05 Score=85.02 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=73.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-+++|||||..|+++|..+++.|.+|+++|+.......
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 183 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG------------------------------------------ 183 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc------------------------------------------
Confidence 47999999999999999999999999999986311100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
..+ ..+.+.+.+.+++ .|++++ +++|+++..+++. ..|.+.+|.++.||.||+|+|..
T Consensus 184 -----------~~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 184 -----------LLH-PAAAKAVQAGLEG-LGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp -----------TSC-HHHHHHHHHHHHT-TTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHH-cCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCC
Confidence 001 2344555666666 688885 8899999876654 46778888899999999999985
No 184
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.12 E-value=2.1e-06 Score=93.68 Aligned_cols=54 Identities=22% Similarity=0.147 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEEe--CCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLIIK--TNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~--~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+++.+.++. .|.++ +++.|++|..+ ++++++|.+ +|.++.||.||+|+|.|
T Consensus 243 ~l~~al~~~~~~-~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 243 ELPQGFARLSAI-YGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp HHHHHHHHHHHH-TTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred HHHHHHHHHHHH-cCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 566777777776 45666 59999999888 788888877 57889999999999987
No 185
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.12 E-value=1.2e-06 Score=100.67 Aligned_cols=45 Identities=16% Similarity=-0.034 Sum_probs=37.5
Q ss_pred CCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCCCCCCCCc
Q psy9395 362 QIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGR 406 (637)
Q Consensus 362 ~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~~~~~~~r 406 (637)
.+||+|++||+.+......|..||..||.|+...+.++++....|
T Consensus 640 ~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 640 EIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp SCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCCTTSCSSCC
T ss_pred CCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccCCCCCCcCh
Confidence 489999999999887777899999999999998887776544444
No 186
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.12 E-value=9.4e-07 Score=91.93 Aligned_cols=39 Identities=33% Similarity=0.463 Sum_probs=33.3
Q ss_pred cccEEEECcchHHHHHHHHHhh--CCCcEEEEccCCCCCCc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSAR--MGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~--~G~~V~LiE~~~~~~G~ 44 (637)
++||+||||||||++||+.|++ .|++|+|+|+.....|.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 5899999999999999999975 59999999997444443
No 187
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=1.7e-05 Score=86.43 Aligned_cols=95 Identities=21% Similarity=0.266 Sum_probs=71.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||.+|+++|..+++.|.+|+++|+.....
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------------------- 203 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------------------- 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------------------------
Confidence 479999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. .+ ..+.+.+.+.+++ .|++++ +++|+++..+++. +.+.+.+|.++.+|.||+|+|..
T Consensus 204 ---~~-------~~-~~~~~~l~~~l~~-~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 204 ---PT-------MD-LEVSRAAERVFKK-QGLTIRTGVRVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-HTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEECCEEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCC
Confidence 00 01 1233445555555 578885 8899999876664 34666678889999999999985
No 188
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.06 E-value=1.8e-05 Score=86.04 Aligned_cols=96 Identities=20% Similarity=0.162 Sum_probs=71.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+|+.....
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 203 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------------------- 203 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh--------------------------------------------
Confidence 379999999999999999999999999999862111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| .+++ .+.+.+.+.+++ .|++++ +++|+++..++++...|.+.+|..+.+|.||+|+|..
T Consensus 204 ---~-------~~~~-~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 204 ---P-------SFDP-MISETLVEVMNA-EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHH-HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred ---h-------hhhH-HHHHHHHHHHHH-CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 0 0111 234445555655 588885 8899999765443345778888889999999999984
No 189
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.05 E-value=6e-05 Score=83.16 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=42.0
Q ss_pred cCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCC-------eEEEEEEecc-----eEEEeceEEEecccc
Q psy9395 99 VDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTN-------KILGVVTKIG-----IKFFSKTVILTTGTF 158 (637)
Q Consensus 99 ~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~-------~v~gV~~~~g-----~~i~a~~VIlAtG~~ 158 (637)
..+..+.++++..+++ -+..+ ++++|+++...+. ..+.|.+.++ .++.|+.||+|||..
T Consensus 142 p~r~E~~~Yl~~~A~~-~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQ-FSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CBHHHHHHHHHHHHHT-TGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHH-cCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 3456778888877776 44444 7999999976432 2466777553 479999999999974
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.05 E-value=1.9e-05 Score=85.41 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=73.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER------------------------------------------ 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999985211100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEE--eCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLII--KTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~--~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ .|+++. ++.|+++.. +++++.+|.+.+|..+.+|.||+|+|..
T Consensus 188 -----------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 188 -----------VTA-PPVSAFYEHLHRE-AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp -----------TSC-HHHHHHHHHHHHH-HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred -----------hhh-HHHHHHHHHHHHh-CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 011 1233445555555 588885 889999976 4567778888889899999999999984
No 191
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.02 E-value=5.1e-06 Score=89.36 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=36.5
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCC-CcEEEEccCCCCCC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMG-QKTLLLSHNIDTIG 43 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~~~~~G 43 (637)
|++.+.+||+|||||++|++||+.|++.| ++|+|+|+....+|
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 65556689999999999999999999999 99999999744444
No 192
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.02 E-value=3.7e-06 Score=90.17 Aligned_cols=43 Identities=28% Similarity=0.425 Sum_probs=37.0
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhC-CCcEEEEccCCCCCCcc
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARM-GQKTLLLSHNIDTIGQM 45 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~-G~~V~LiE~~~~~~G~~ 45 (637)
|..++||+|||||++|++||+.|++. |++|+|+|++...+|..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 65569999999999999999999998 99999999985444443
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.00 E-value=2.6e-05 Score=84.63 Aligned_cols=96 Identities=23% Similarity=0.272 Sum_probs=70.9
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
..+|+|||||++|+++|..+++.|.+|+++|+.......
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------------------------------------- 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-----------------------------------------
Confidence 468999999999999999999999999999986311100
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ .|++++ ++.|+++..+ +++..+.+ ++.++.+|.||+|+|..
T Consensus 188 ------------~~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 188 ------------YLD-KEFTDVLTEEMEA-NNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp ------------TCC-HHHHHHHHHHHHT-TTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred ------------cCC-HHHHHHHHHHHHh-CCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 011 1234555666666 689985 7899998754 45544555 55689999999999985
No 194
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.00 E-value=4.5e-05 Score=84.23 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=32.6
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..||++|||+|++|+.+|+.|++.|.+|+|||+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35999999999999999999999999999999864
No 195
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.00 E-value=4.5e-05 Score=83.25 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=71.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------------------- 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------------------- 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc--------------------------------------------
Confidence 369999999999999999999999999999852111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecce-EEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGI-KFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~-~i~a~~VIlAtG~~ 158 (637)
+ .+++ .+...+.+.+++ .+++++ +++|+++..++++ ..|.+.+|. ++.+|.||+|+|..
T Consensus 203 ---~-------~~~~-~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 203 ---F-------QFDP-LLSATLAENMHA-QGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHH-TTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEE
T ss_pred ---c-------ccCH-HHHHHHHHHHHH-CCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCC
Confidence 0 0111 123344555555 689986 8899999866555 557788888 89999999999985
No 196
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.99 E-value=5.2e-05 Score=82.77 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=70.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+|+.....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 205 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------------------- 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe-c--ce--EEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK-I--GI--KFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~-~--g~--~i~a~~VIlAtG~~ 158 (637)
|. .+ ..+.+.+.+.+++ .|++++ +++|+++..+++.+ .|.+. + |. ++.+|.||+|+|..
T Consensus 206 ---~~-------~~-~~~~~~l~~~l~~-~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 206 ---PQ-------GD-PETAALLRRALEK-EGIRVRTKTKAVGYEKKKDGL-HVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCEEECSEEEEEEEEETTEE-EEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHh-cCCEEEcCCEEEEEEEeCCEE-EEEEeecCCCceeEEEcCEEEECCCcc
Confidence 00 11 1234445556665 689985 88999998766653 46655 5 65 89999999999984
No 197
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.98 E-value=2.6e-05 Score=87.87 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.4
Q ss_pred CcccEEEECcchHHHHHHHHHhh-CCCcEEEEccCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSAR-MGQKTLLLSHNI 39 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~-~G~~V~LiE~~~ 39 (637)
..||+||||||.+|+.+|..|++ .|.+|+|||++.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 35999999999999999999999 899999999873
No 198
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.97 E-value=5.4e-05 Score=82.86 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=70.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+++......
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 220 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------------------------------------------- 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-------------------------------------------
Confidence 4799999999999999999999999999998631110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe-CCeEEEEEEe-----cceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK-TNKILGVVTK-----IGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~-~~~v~gV~~~-----~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+...+.+.+++ .|++++ +++|+++..+ +++...|.+. ++..+.+|.||+|+|..
T Consensus 221 -----------~~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 221 -----------SMD-GEVAKATQKFLKK-QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp -----------SSC-HHHHHHHHHHHHH-TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 011 1234455566665 789996 7899999752 3334556665 45789999999999984
No 199
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.96 E-value=7.8e-06 Score=90.33 Aligned_cols=46 Identities=15% Similarity=0.064 Sum_probs=36.0
Q ss_pred ccCccccccCCCCEEEEEeecCCC--CH-HHHHHHHHHHHHHHHHHhCC
Q psy9395 353 NLKSSLETKQIHGLFFAGQINGTT--GY-EEAASQGLLAGLNAALFSQD 398 (637)
Q Consensus 353 ~l~~tlesk~v~gLf~aGei~G~~--Gy-~eA~a~G~~AG~naa~~~~~ 398 (637)
.+|++|+++..|++|++||++... .- -.|..||..+|.|+.+.+++
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~~ 402 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQI 402 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhcc
Confidence 466889998899999999985432 21 26889999999999876543
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.95 E-value=5e-05 Score=82.54 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=72.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.......
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 187 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK------------------------------------------ 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh------------------------------------------
Confidence 36999999999999999999999999999985211100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ .|++++ +++|+++..+++++..+.+ +|.++.+|.||+|+|..
T Consensus 188 -----------~~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 188 -----------YFD-KEFTDILAKDYEA-HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp -----------TSC-HHHHHHHHHHHHH-TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred -----------hhh-hhHHHHHHHHHHH-CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 011 1234455566665 788885 8899999865677665655 67889999999999984
No 201
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.94 E-value=3.8e-05 Score=84.55 Aligned_cols=96 Identities=18% Similarity=0.146 Sum_probs=73.1
Q ss_pred ccEEEECcchHHHHHHHHHhhC---CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM---GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~---G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
-.++|||||..|+++|..+++. |.+|+++++.....
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l----------------------------------------- 226 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL----------------------------------------- 226 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----------------------------------------
Confidence 3799999999999999999999 99999999863111
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ ++.|+++..++++...|.+.+|..+.+|.||+|+|..
T Consensus 227 ------~~-------~d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 227 ------RG-------FD-SELRKQLTEQLRA-NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp ------TT-------SC-HHHHHHHHHHHHH-TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred ------cc-------cC-HHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 00 11 1234455666665 789985 8899999766544456778888889999999999985
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=7.4e-05 Score=81.26 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=69.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-+|+|||||..|+++|..+++.|.+|+|+|+.....
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 206 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------------------- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999862110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ +++|+++..+++++ .+.+. ++..+.+|.||+|+|..
T Consensus 207 ---~~-------~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 207 ---SG-------FE-KQMAAIIKKRLKK-KGVEVVTNALAKGAEEREDGV-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCEEEESEEEEEEEEETTEE-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEeCCeE-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 00 11 1233445555665 688885 88999997666543 34443 45689999999999984
No 203
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.93 E-value=4.7e-05 Score=83.52 Aligned_cols=96 Identities=19% Similarity=0.144 Sum_probs=71.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 221 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------------------- 221 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCe-EEEEEEecc-eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNK-ILGVVTKIG-IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~-v~gV~~~~g-~~i~a~~VIlAtG~~ 158 (637)
| .+++ .+.+.+.+.+++ .|++++ +++|+++..++++ +..|.+.+| ..+.+|.||+|+|..
T Consensus 222 ---~-------~~d~-~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 222 ---R-------KFDE-CIQNTITDHYVK-EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHH-HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred ---c-------ccCH-HHHHHHHHHHHh-CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 0 0111 233445555655 688885 8899999764333 456778888 789999999999974
No 204
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.91 E-value=2e-05 Score=84.71 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=73.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------------------------------------- 179 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------------------------------------- 179 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------------------------------------------
Confidence 479999999999999999999999999999862110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. ..+ ..+.+.+.+.+++ .|++++ ++.|.++..++ ++.+|.+.+|+++.||.||+|+|..
T Consensus 180 ---~~------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 180 ---VR------VLG-RRIGAWLRGLLTE-LGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp ---HH------HHC-HHHHHHHHHHHHH-HTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred ---hh------hcC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 00 001 1234455555655 689986 88999987543 5667889899999999999999984
No 205
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.90 E-value=5e-05 Score=83.70 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=72.5
Q ss_pred ccEEEECcchHHHHHHHHHhhC---CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM---GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRI 83 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~---G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~ 83 (637)
-.++|||||..|+++|..+++. |.+|+++++.....
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l----------------------------------------- 230 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL----------------------------------------- 230 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-----------------------------------------
Confidence 3699999999999999999999 99999999863111
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| .+++ .+...+.+.+++ .|++++ ++.|.++..++++...|.+.+|..+.+|.||+|+|..
T Consensus 231 ------~-------~~d~-~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 231 ------R-------GFDE-TIREEVTKQLTA-NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp ------T-------TSCH-HHHHHHHHHHHH-TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred ------c-------ccCH-HHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 0 0111 234455566665 689985 8899999765544456778888899999999999984
No 206
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=6.5e-05 Score=82.87 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=71.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 212 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------------------- 212 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--------------------------------------------
Confidence 369999999999999999999999999999862111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceE-EEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIK-FFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~-i~a~~VIlAtG~~ 158 (637)
| .+++ .+.+.+.+.+++ .|++++ ++.|+++..++++...|.+.+|.. +.+|.||+|+|..
T Consensus 213 ---~-------~~d~-~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 213 ---R-------KFDE-SVINVLENDMKK-NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHH-TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred ---c-------ccch-hhHHHHHHHHHh-CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 0 0111 234445566665 789985 889999976543334577778877 9999999999985
No 207
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.89 E-value=5.9e-05 Score=80.91 Aligned_cols=92 Identities=17% Similarity=0.257 Sum_probs=69.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR------------------------------------------ 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999986311100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+...+.+.+++ .|++++ ++.|+++. ++ .|.+.+|.++.||.||+|+|..
T Consensus 184 -----------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 184 -----------AAP-ATLADFVARYHAA-QGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp -----------TSC-HHHHHHHHHHHHH-TTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHH-cCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCC
Confidence 011 1233445555665 689985 88999987 44 4677888899999999999984
No 208
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.88 E-value=0.00011 Score=75.46 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=70.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|++.|..+++.|.+|+++++... +.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~------------------------------------------- 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG-FR------------------------------------------- 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CC-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc-cc-------------------------------------------
Confidence 3699999999999999999999999999998521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec----c--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI----G--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~----g--~~i~a~~VIlAtG~ 157 (637)
+ + ..+.+.+.+.+++ .+++++ +++|+++..+++++.+|.+.+ | ..+.+|.||+|+|.
T Consensus 182 ---~---------~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 182 ---A---------E-KILIKRLMDKVEN-GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp ---C---------C-HHHHHHHHHHHHT-SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred ---c---------C-HHHHHHHHHhccc-CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 0 0 1123334445555 789996 889999987666777777764 4 58999999999997
No 209
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.86 E-value=7.5e-05 Score=82.83 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=72.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------------------- 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------------------- 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--------------------------------------------
Confidence 479999999999999999999999999999862110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC-CeE--EEEEEecce-EEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT-NKI--LGVVTKIGI-KFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~-~~v--~gV~~~~g~-~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+...+.+.+++ .|++++ +++|+++..++ +++ +.|.+.+|. ++.||.||+|+|.+
T Consensus 251 ---~~-------~~-~~~~~~l~~~l~~-~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 251 ---LI-------KD-NETRAYVLDRMKE-QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp ---TC-------CS-HHHHHHHHHHHHH-TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred ---cc-------cc-HHHHHHHHHHHHh-CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 00 11 1234555666666 689986 88999997643 333 456777777 89999999999985
No 210
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.86 E-value=8.1e-05 Score=81.36 Aligned_cols=96 Identities=25% Similarity=0.266 Sum_probs=73.3
Q ss_pred ccEEEECcchHHHHHHHHHhhC-CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM-GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~-G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
-+|+|||||..|+++|..+++. |.+|+++++.....
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l------------------------------------------- 196 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM------------------------------------------- 196 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------------------
Confidence 4799999999999999999999 99999999852111
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. ..+ ..+.+.+.+.+++ .|++++ +++|+++..+++++. |.+.+|+++.||.||+|+|..
T Consensus 197 ----~~------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 197 ----PG------FTS-KSLSQMLRHDLEK-NDVVVHTGEKVVRLEGENGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp ----TT------TSC-HHHHHHHHHHHHH-TTCEEECSCCEEEEEESSSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred ----cc------ccC-HHHHHHHHHHHHh-cCCEEEeCCEEEEEEccCCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 00 011 1244555666665 789986 789999987666655 777888899999999999985
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.86 E-value=0.00012 Score=79.68 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=72.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.++|||||..|+++|..+++.|.+|+++++.....
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 183 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------------------- 183 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc--------------------------------------------
Confidence 369999999999999999999999999999862111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. .++ ..+.+.+.+.+++ .|++++ ++.|+++..+++++ .|.+.++ ++.||.||+|+|..
T Consensus 184 ---~~------~~d-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 184 ---PK------YFD-KEMVAEVQKSLEK-QAVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp ---TT------TCC-HHHHHHHHHHHHT-TTEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCCB
T ss_pred ---cc------cCC-HHHHHHHHHHHHH-cCCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCCC
Confidence 00 011 1244555666665 789995 88999998667766 6777666 89999999999985
No 212
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.85 E-value=1.4e-05 Score=91.63 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=32.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.+||+|||||+||++||..|++.|++|+|+|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4899999999999999999999999999999963
No 213
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.84 E-value=7.8e-06 Score=88.69 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=35.1
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
|++ .++||+|||||++|++||+.|++.|++|+|+|++. .+|.
T Consensus 1 m~~-~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~-~~GG 42 (453)
T 2yg5_A 1 VPT-LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARD-RVGG 42 (453)
T ss_dssp -CE-EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-SSCT
T ss_pred CCC-CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC-CCCC
Confidence 443 35899999999999999999999999999999974 4443
No 214
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.84 E-value=0.00011 Score=81.00 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=72.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.++|||||..|++.|..+++.|.+|+++++.....
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 218 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------------------- 218 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+...+.+.+++ .|++++ ++.|+++..+++++ .|.+.+|.++.+|.||+|+|..
T Consensus 219 ---~~-------~d-~~~~~~l~~~l~~-~GV~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 219 ---PY-------ED-ADAALVLEESFAE-RGVRLFKNARAASVTRTGAGV-LVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp ---CC-------SS-HHHHHHHHHHHHH-TTCEEETTCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEeCCEE-EEEECCCcEEEcCEEEECCCCC
Confidence 00 11 1234455666665 789996 88999998665554 4666778889999999999986
No 215
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.83 E-value=9.8e-05 Score=80.72 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=70.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 216 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------------------------------------------ 216 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc------------------------------------------
Confidence 36999999999999999999999999999986311100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEE-----ecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVT-----KIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~-----~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ .|++++ +++|+++..++++.+.+.+ .++.++.+|.||+|+|..
T Consensus 217 -----------~~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 217 -----------GID-MEISKNFQRILQK-QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp -----------SCC-HHHHHHHHHHHHH-TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHH-CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 011 1234455566665 689985 8899999766554233443 355789999999999984
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.82 E-value=7.5e-05 Score=82.10 Aligned_cols=95 Identities=23% Similarity=0.221 Sum_probs=70.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 232 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG------------------------------------------ 232 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh------------------------------------------
Confidence 46999999999999999999999999999986311100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ .|++++ +++|+++.. ++++..|.+ +|.++.+|.||+|+|..
T Consensus 233 -----------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 233 -----------YYD-RDLTDLMAKNMEE-HGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp -----------TSC-HHHHHHHHHHHHT-TTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred -----------HHH-HHHHHHHHHHHHh-CCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCC
Confidence 011 1234455666666 689985 889999875 444544555 67789999999999974
No 217
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.80 E-value=1.6e-05 Score=87.34 Aligned_cols=46 Identities=22% Similarity=0.245 Sum_probs=36.4
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCC-CcEEEEccCCCCCCccc
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMG-QKTLLLSHNIDTIGQMS 46 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~~~~~G~~~ 46 (637)
|++.+.+||+|||||++|++||+.|++.| .+|+|+|+....+|...
T Consensus 4 m~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 4 MAELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp ---CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred CCcccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 33345689999999999999999999998 89999999854444443
No 218
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.80 E-value=9.8e-05 Score=80.51 Aligned_cols=95 Identities=17% Similarity=0.287 Sum_probs=72.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.++|||||..|++.|..+++.|.+|+++++.....
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------------------- 206 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999862111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEE-EecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVV-TKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~-~~~g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ ++.|.++..++++...|. +.+|. +.+|.||+|+|..
T Consensus 207 ---~~-------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 207 ---SR-------FD-QDMRRGLHAAMEE-KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 00 11 1234555666665 789986 789999987655545677 77887 9999999999985
No 219
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.79 E-value=9.6e-05 Score=81.05 Aligned_cols=95 Identities=14% Similarity=0.076 Sum_probs=71.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+|+.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------------------- 221 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------------------- 221 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------------------
Confidence 479999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec----ceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI----GIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~----g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ +++|.++..+++. ..|.+.+ |.++.+|.||+|+|..
T Consensus 222 ---~~-------~~-~~~~~~l~~~l~~-~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 222 ---QG-------AD-RDLVKVWQKQNEY-RFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp ---TT-------SC-HHHHHHHHHHHGG-GEEEEECSCEEEEEEEETTE-EEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHh-cCCEEEECCEEEEEEEcCCe-EEEEEeccCCCceEEEcCEEEECcCCC
Confidence 00 11 1234455666665 689985 8899999766554 4566666 6779999999999984
No 220
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.78 E-value=0.00011 Score=80.47 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=69.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-+|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 222 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG-------------------------------------------- 222 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh--------------------------------------------
Confidence 579999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+ .++ ..+.+.+.+.+++ .|++++ ++.|+++..+ +++..+.+. +.++.+|.||+|+|..
T Consensus 223 ---~-------~~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 223 ---T-------IYD-GDMAEYIYKEADK-HHIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGVK 281 (480)
T ss_dssp ---S-------SSC-HHHHHHHHHHHHH-TTCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCEE
T ss_pred ---h-------cCC-HHHHHHHHHHHHH-cCcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCCC
Confidence 0 011 1234455566665 689985 8899998754 556666664 4589999999999985
No 221
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.78 E-value=2.2e-05 Score=83.92 Aligned_cols=39 Identities=33% Similarity=0.492 Sum_probs=34.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
..+||+|||||++|++||+.|++.|++|+|+|+....+|
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 458999999999999999999999999999999743333
No 222
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.78 E-value=0.00012 Score=80.19 Aligned_cols=95 Identities=24% Similarity=0.301 Sum_probs=72.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------------------- 227 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------------------- 227 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc--------------------------------------------
Confidence 479999999999999999999999999999852111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+. ++ ..+...+.+.+++ .|++++ ++.|+++..+++++ .|.+.+|.++.||.||+|+|..
T Consensus 228 ---~~-------~~-~~~~~~l~~~l~~-~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 228 ---RN-------FD-YDLRQLLNDAMVA-KGISIIYEATVSQVQSTENCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-HTCEEESSCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEeeCCEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 00 11 1234445556665 688886 78999998766654 6788888899999999999984
No 223
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.75 E-value=0.0001 Score=75.92 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=68.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-------------------------------------------- 209 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-------------------------------------------- 209 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC--------------------------------------------
Confidence 469999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec-----ceEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI-----GIKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~-----g~~i~a~~VIlAtG~ 157 (637)
+ ...+.+.+.+..+++++ ++.|.++..+++++.+|.+.+ +..+.+|.||+|+|.
T Consensus 210 ---~--------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 210 ---A--------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp ---S--------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred ---C--------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 0 01122233333589996 889999987777677787766 468999999999997
No 224
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.74 E-value=0.00021 Score=77.93 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=70.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 212 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------------------- 212 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--------------------------------------------
Confidence 369999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| .+ ..+.+.+.+.+++ .|++++ +++|+++..+++ .+.|.+. +.++.+|.||+|+|.+
T Consensus 213 ---~--------~~-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~-~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 213 ---R--------ED-PAIGEAVTAAFRA-EGIEVLEHTQASQVAHMDG-EFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp ---T--------SC-HHHHHHHHHHHHH-TTCEEETTCCEEEEEEETT-EEEEEET-TEEEEESEEEECSCEE
T ss_pred ---C--------CC-HHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCC-EEEEEEC-CcEEEcCEEEECCCCC
Confidence 0 01 1234455666665 689986 789999976655 3456655 4589999999999986
No 225
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.74 E-value=0.00021 Score=77.87 Aligned_cols=95 Identities=18% Similarity=0.247 Sum_probs=68.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 210 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------------------- 210 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc--------------------------------------------
Confidence 469999999999999999999999999999863110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHH-HhcCCeEEE-cceeEEEEEeCCeEEEEEEe--cc--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYL-ENQLNLYLF-QEEVDDLIIKTNKILGVVTK--IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l-~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~--~g--~~i~a~~VIlAtG~~ 158 (637)
|. +++ .+.+.+.+.+ ++ .|++++ +++|+++..+++.+ .+.+. +| ..+.+|.||+|+|..
T Consensus 211 ---~~-------~d~-~~~~~l~~~l~~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 211 ---PT-------LDE-DVTNALVGALAKN-EKMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp ---TT-------SCH-HHHHHHHHHHHHH-TCCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEECSCEE
T ss_pred ---cc-------CCH-HHHHHHHHHHhhc-CCcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEECCCcc
Confidence 00 111 2344555666 55 789985 88999997655443 35554 56 689999999999984
No 226
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.74 E-value=8.9e-05 Score=80.76 Aligned_cols=93 Identities=18% Similarity=0.274 Sum_probs=66.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||.+|+++|..+++.|.+|+|+++.....
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 207 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------------------- 207 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecc--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g--~~i~a~~VIlAtG~~ 158 (637)
|. .+ ..+.+.+.+.+++ .|++++ +++|+++.. ++ +.+...+| ..+.+|.||+|+|..
T Consensus 208 ---~~-------~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~--~~-v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 208 ---PT-------YD-SELTAPVAESLKK-LGIALHLGHSVEGYEN--GC-LLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-HTCEEETTCEEEEEET--TE-EEEECSSSCCCEECCSCEEECCCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEECCEEEEEEe--CC-EEEEECCCceEEEECCEEEECcCCC
Confidence 00 11 1233344555555 688886 889999864 44 33443356 689999999999984
No 227
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.73 E-value=0.00021 Score=79.79 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=70.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeeccc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSS 87 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~ 87 (637)
.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------------------- 187 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM--------------------------------------------- 187 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC---------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc---------------------------------------------
Confidence 79999999999999999999999999999852110
Q ss_pred cCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe-------------------CCeEEEEEEecceEEE
Q psy9395 88 KGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK-------------------TNKILGVVTKIGIKFF 147 (637)
Q Consensus 88 ~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~-------------------~~~v~gV~~~~g~~i~ 147 (637)
| ..+ ..+...+.+.+++ .|++++ ++.|.++..+ ++++ .+.+.+|.++.
T Consensus 188 --~-------~~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~ 255 (565)
T 3ntd_A 188 --T-------PVD-REMAGFAHQAIRD-QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLE 255 (565)
T ss_dssp --T-------TSC-HHHHHHHHHHHHH-TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEE
T ss_pred --h-------hcC-HHHHHHHHHHHHH-CCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEE
Confidence 0 011 1233445555555 788885 8899998763 4443 46667888999
Q ss_pred eceEEEecccc
Q psy9395 148 SKTVILTTGTF 158 (637)
Q Consensus 148 a~~VIlAtG~~ 158 (637)
||.||+|+|..
T Consensus 256 ~D~vi~a~G~~ 266 (565)
T 3ntd_A 256 TDLLIMAIGVR 266 (565)
T ss_dssp ESEEEECSCEE
T ss_pred cCEEEECcCCc
Confidence 99999999984
No 228
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.71 E-value=2.2e-05 Score=83.14 Aligned_cols=39 Identities=26% Similarity=0.412 Sum_probs=34.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
+|||+|||||++|++||+.|++.|++|+|+|++...+|.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 379999999999999999999999999999997444443
No 229
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.71 E-value=2.8e-05 Score=85.31 Aligned_cols=40 Identities=33% Similarity=0.468 Sum_probs=35.1
Q ss_pred CCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 4 ~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
++.+||+|||||+||++||+.|++.|++|+|+|+....+|
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 3458999999999999999999999999999999854444
No 230
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.71 E-value=0.00023 Score=77.54 Aligned_cols=95 Identities=16% Similarity=0.238 Sum_probs=68.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+++.....
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 207 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------------------- 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999862110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe-cc--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK-IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~-~g--~~i~a~~VIlAtG~~ 158 (637)
|. +++ .+.+.+.+.+++ .|++++ +++|+++..+++++ .+.+. +| .++.+|.||+|+|..
T Consensus 208 ---~~-------~~~-~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 208 ---PN-------EDA-DVSKEIEKQFKK-LGVTILTATKVESIADGGSQV-TVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp ---TT-------SCH-HHHHHHHHHHHH-HTCEEECSCEEEEEEECSSCE-EEEEESSSCEEEEEESEEEECSCEE
T ss_pred ---cc-------cCH-HHHHHHHHHHHH-cCCEEEeCcEEEEEEEcCCeE-EEEEEcCCceEEEEcCEEEECCCCC
Confidence 00 111 233445555555 578885 88999997655543 35554 56 689999999999973
No 231
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.71 E-value=3.2e-05 Score=83.74 Aligned_cols=42 Identities=26% Similarity=0.354 Sum_probs=36.3
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
|+..+||+|||||++|+.||+.|++.|++|+|+|++...+|.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 445699999999999999999999999999999998544443
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=0.00011 Score=77.55 Aligned_cols=89 Identities=26% Similarity=0.332 Sum_probs=67.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 179 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------------------- 179 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT--------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| ++ ..+.+.+.+.+++ .|++++ +++|+++. .+ +|.+.+|. +.+|.||+|+|..
T Consensus 180 ---~--------~~-~~~~~~l~~~l~~-~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 180 ---G--------LD-EELSNMIKDMLEE-TGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp ---T--------CC-HHHHHHHHHHHHH-TTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEE
T ss_pred ---c--------CC-HHHHHHHHHHHHH-CCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCC
Confidence 0 01 1234445555665 689986 78898885 22 36677787 9999999999984
No 233
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.69 E-value=2.3e-05 Score=86.21 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=34.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
+.+||+|||||++|++||+.|++.|++|+|+|+....+|.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 3489999999999999999999999999999998544443
No 234
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.69 E-value=0.00027 Score=77.66 Aligned_cols=94 Identities=20% Similarity=0.151 Sum_probs=69.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 210 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA-------------------------------------------- 210 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe--cc--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK--IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~--~g--~~i~a~~VIlAtG~~ 158 (637)
| ..+ ..+.+.+.+.+++ . +.++ ++.|.++..+++++. +.+. +| ..+.+|.||+|+|..
T Consensus 211 ---~-------~~d-~~~~~~l~~~l~~-~-V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 211 ---N-------LQD-EEMKRYAEKTFNE-E-FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp ---T-------CCC-HHHHHHHHHHHHT-T-SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred ---c-------cCC-HHHHHHHHHHHhh-C-cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 0 011 1234455666665 4 8886 889999987666554 5554 56 689999999999983
No 235
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.69 E-value=2.4e-05 Score=86.61 Aligned_cols=38 Identities=37% Similarity=0.501 Sum_probs=34.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCC-CcEEEEccCCCCCCc
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMG-QKTLLLSHNIDTIGQ 44 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~~~~~G~ 44 (637)
.+||+|||||+||++||+.|++.| ++|+|+|+.. .+|.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~-riGG 46 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARD-RVGG 46 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSS-SSBT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCC-CCCC
Confidence 489999999999999999999999 9999999984 4443
No 236
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.68 E-value=0.00027 Score=76.73 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=75.2
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHH-HHHhhcCCeEee
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMA-IATDKSGIQFRI 83 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~-~~~~~~gi~~~~ 83 (637)
..|+|||||..|+++|..|++. |.+|+++++......... .+-............+..+..... .+.....-
T Consensus 228 ~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~-~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~---- 302 (463)
T 3s5w_A 228 MKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADD-SPFVNEVFAPKFTDLIYSREHAERERLLREYHN---- 302 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCC-CHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG----
T ss_pred CeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccC-CccchhccChhHHHHHhcCCHHHHHHHHHHhhc----
Confidence 5799999999999999999998 999999998632111000 000000000011111111111100 00000000
Q ss_pred eccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEeccc
Q psy9395 84 LNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGT 157 (637)
Q Consensus 84 l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~ 157 (637)
..+.. .+...-...+...+.+.+....++.++ ++.|+++..+++. +.|.+. +|. ++.+|.||+|||.
T Consensus 303 ---~~~~~---~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 303 ---TNYSV---VDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG-IELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp ---GTSSC---BCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE-EEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred ---cCCCc---CCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE-EEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 00000 000111223445555555555789986 8889999876665 446655 554 5999999999998
Q ss_pred c
Q psy9395 158 F 158 (637)
Q Consensus 158 ~ 158 (637)
.
T Consensus 376 ~ 376 (463)
T 3s5w_A 376 E 376 (463)
T ss_dssp E
T ss_pred C
Confidence 5
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.67 E-value=0.00022 Score=78.38 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=70.4
Q ss_pred ccEEEECcchHHHHHHHHHhh----CCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEe
Q psy9395 7 FDVIVVGGGHAGTEAALVSAR----MGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFR 82 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~----~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~ 82 (637)
-.|+|||||..|+++|..+++ .|.+|+++++.....+.
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-------------------------------------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-------------------------------------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--------------------------------------
Confidence 369999999999999999887 47889999875211100
Q ss_pred eeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 83 ILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 83 ~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+. ..+...+.+.+++ .|++++ ++.|+++..+++.+ .|.+.+|.++.||.||+|+|..
T Consensus 223 ---------------~l~-~~~~~~~~~~l~~-~GV~v~~~~~V~~i~~~~~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 223 ---------------ILP-EYLSNWTMEKVRR-EGVKVMPNAIVQSVGVSSGKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp ---------------TSC-HHHHHHHHHHHHT-TTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECCCEE
T ss_pred ---------------cCC-HHHHHHHHHHHHh-cCCEEEeCCEEEEEEecCCeE-EEEECCCCEEECCEEEECCCCC
Confidence 000 1233445556665 689985 88999997666654 6788888899999999999985
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.66 E-value=0.00032 Score=77.04 Aligned_cols=95 Identities=22% Similarity=0.265 Sum_probs=69.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 234 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------------------- 234 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---c--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---G--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g--~~i~a~~VIlAtG~~ 158 (637)
+ .++ ..+.+.+.+.+++ .|++++ +++|.++..+++.+ .+.+.+ | ..+.+|.||+|+|..
T Consensus 235 ---~-------~~d-~~~~~~l~~~l~~-~gV~v~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 235 ---G-------GMD-GEVAKQLQRMLTK-QGIDFKLGAKVTGAVKSGDGA-KVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp ---S-------SSC-HHHHHHHHHHHHH-TTCEEECSEEEEEEEEETTEE-EEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred ---c-------cCC-HHHHHHHHHHHHh-CCCEEEECCeEEEEEEeCCEE-EEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 0 011 1234455556665 789986 78999998776654 355542 4 689999999999973
No 239
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.65 E-value=0.00037 Score=76.16 Aligned_cols=95 Identities=21% Similarity=0.187 Sum_probs=70.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 216 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------------------- 216 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC--------------------------------------------
Confidence 469999999999999999999999999999862111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecc---eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIG---IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g---~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ ++.|+++..+++.+. +.+.++ ..+.+|.||+|+|..
T Consensus 217 ---~~-------~~-~~~~~~l~~~l~~-~Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 217 ---PA-------VD-EQVAKEAQKILTK-QGLKILLGARVTGTEVKNKQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTEEEEETCEEEEEEECSSCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHh-CCCEEEECCEEEEEEEcCCEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 00 11 1234455556665 789985 889999987665543 555543 689999999999973
No 240
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.65 E-value=0.0002 Score=74.93 Aligned_cols=92 Identities=14% Similarity=0.206 Sum_probs=68.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeeccc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSS 87 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~ 87 (637)
.|+|||+|..|++.|..+++.|.+|+++++.......
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------------------------------------- 201 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------------------------------------- 201 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------------------------------------------
T ss_pred cEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------------------------------------------
Confidence 6999999999999999999999999999985211000
Q ss_pred cCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe--cc--eEEEeceEEEeccc
Q psy9395 88 KGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK--IG--IKFFSKTVILTTGT 157 (637)
Q Consensus 88 ~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~--~g--~~i~a~~VIlAtG~ 157 (637)
+ .+.+.+.+.+++ .+++++ +++|+++..+++++.+|.+. +| ..+.+|.||+|+|.
T Consensus 202 --~------------~~~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 202 --G------------KTAHEVERARAN-GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp --S------------HHHHSSHHHHHH-TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred --H------------HHHHHHHHHhhc-CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 0 011122333333 689986 77999998777777677765 66 68999999999996
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.64 E-value=0.00033 Score=72.30 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=68.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-------------------------------------------- 188 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-------------------------------------------- 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC--------------------------------------------
Confidence 369999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cc--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IG--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g--~~i~a~~VIlAtG~ 157 (637)
+. ......+.+.+++ .+++++ ++.|.++.. ++++.+|.+. +| .++.+|.||+|+|.
T Consensus 189 ---~~----------~~~~~~l~~~l~~-~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 189 ---AH----------EASVKELMKAHEE-GRLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp ---SC----------HHHHHHHHHHHHT-TSSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ---cc----------HHHHHHHHhcccc-CCeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 00 0112334444554 689986 778999876 4556667765 66 68999999999997
No 242
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=0.00017 Score=78.59 Aligned_cols=95 Identities=16% Similarity=0.269 Sum_probs=69.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------------------- 213 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------------------- 213 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------------------
Confidence 479999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cc--eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IG--IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g--~~i~a~~VIlAtG~~ 158 (637)
|. .+ ..+.+.+.+.+++ .|++++ +++|.++..+++.+ .+.+. +| ..+.+|.||+|+|..
T Consensus 214 ---~~-------~~-~~~~~~l~~~l~~-~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 214 ---PT-------MD-AEIRKQFQRSLEK-QGMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-SSCCEECSEEEEEEECSSSSE-EEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred ---cc-------cc-HHHHHHHHHHHHH-cCCEEEeCCEEEEEEEcCCeE-EEEEEecCCCcceEEECCEEEECCCCC
Confidence 00 11 1234445566665 688885 88999997655443 34443 44 689999999999984
No 243
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.63 E-value=4.8e-05 Score=80.60 Aligned_cols=39 Identities=28% Similarity=0.387 Sum_probs=34.5
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC-CCCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN-IDTIG 43 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~-~~~~G 43 (637)
..+||+|||||++|++||+.|++.|++|+|+|++ ...+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 3589999999999999999999999999999997 54444
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.61 E-value=0.00029 Score=71.87 Aligned_cols=90 Identities=22% Similarity=0.321 Sum_probs=66.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+++|..+++.|.+|+++++.+. +.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~------------------------------------------- 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MK------------------------------------------- 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS-CC-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc-cC-------------------------------------------
Confidence 3699999999999999999999999999998521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---c--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---G--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g--~~i~a~~VIlAtG~ 157 (637)
.+ ..+.+.+.+..+++++ +++|+++..+++++.+|.+.+ | ..+.+|.||+|+|.
T Consensus 181 ------------~~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 181 ------------AD-----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp ------------SC-----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ------------cc-----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 00 0122233433689986 789999986666676777654 4 47899999999986
No 245
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.61 E-value=0.00043 Score=75.64 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=69.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--------------------------------------------
Confidence 369999999999999999999999999999852111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCe-EEEEEEec-------ceEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNK-ILGVVTKI-------GIKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~-v~gV~~~~-------g~~i~a~~VIlAtG~ 157 (637)
+. .+ ..+.+.+.+.+++ .+++++ ++.|+++..+++. ...+.+.+ |..+.+|.||+|+|.
T Consensus 224 ---~~-------~d-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 224 ---RS-------FD-SMISTNCTEELEN-AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred ---cc-------cC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 00 11 1234445555665 789986 7889998765443 34466654 268999999999997
Q ss_pred c
Q psy9395 158 F 158 (637)
Q Consensus 158 ~ 158 (637)
.
T Consensus 292 ~ 292 (478)
T 3dk9_A 292 V 292 (478)
T ss_dssp E
T ss_pred c
Confidence 4
No 246
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.59 E-value=0.00043 Score=70.57 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=66.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+++|..+++.|.+|+++++.. .+.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~------------------------------------------- 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD-GFR------------------------------------------- 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS-SCC-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC-ccC-------------------------------------------
Confidence 469999999999999999999999999999852 110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~ 157 (637)
.++. +.+.+.+..+++++ ++.|+++..+++++.+|.+. +|. .+.+|.||+|+|.
T Consensus 180 ------------~~~~-----~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 180 ------------CAPI-----TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp ------------SCHH-----HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ------------CCHH-----HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 0000 12223333689986 78999998765666667765 564 7899999999997
No 247
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.59 E-value=0.00029 Score=79.17 Aligned_cols=93 Identities=22% Similarity=0.243 Sum_probs=70.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.....
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 223 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------------------- 223 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------------------------------------------
Confidence 369999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
|. ++ ..+.+.+.+.+++ .|++++ ++.|.++..+++ +|.+.+|.++.+|.||+|+|..
T Consensus 224 ---~~-------~~-~~~~~~l~~~l~~-~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 224 ---PP-------ID-YEMAAYVHEHMKN-HDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEE
T ss_pred ---cc-------CC-HHHHHHHHHHHHH-cCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCC
Confidence 00 11 1234445555665 789985 889999875444 3667788899999999999984
No 248
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.58 E-value=0.00045 Score=76.80 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=72.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.++|||||..|++.|..+++.|.+|+|+++. ..+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L-------------------------------------------- 258 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVL-------------------------------------------- 258 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSS--------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccc--------------------------------------------
Confidence 36999999999999999999999999999874 111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
| ..|+ .+...+.+.+++ .++.+ .+..|..+...++.+ .|.+.++..+.+|.|++|+|-.
T Consensus 259 ---~-------~~D~-ei~~~l~~~l~~-~gi~~~~~~~v~~~~~~~~~~-~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 259 ---R-------GFDQ-QCAVKVKLYMEE-QGVMFKNGILPKKLTKMDDKI-LVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHH-TTCEEEETCCEEEEEEETTEE-EEEETTSCEEEESEEEECSCEE
T ss_pred ---c-------ccch-hHHHHHHHHHHh-hcceeecceEEEEEEecCCeE-EEEEcCCCeEEEEEEEEccccc
Confidence 1 0222 244556666766 67888 488899998777754 4777778889999999999974
No 249
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.51 E-value=0.00048 Score=75.41 Aligned_cols=95 Identities=17% Similarity=0.118 Sum_probs=68.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.++|||||..|++.|..+++.|.+|+++++. ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-------------------------------------------- 222 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVL-------------------------------------------- 222 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSS--------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCC--------------------------------------------
Confidence 36999999999999999999999999999873 110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecc-----eEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIG-----IKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g-----~~i~a~~VIlAtG~~ 158 (637)
+. ++ ..+.+.+.+.+++ .|++++ ++.|.++..++++...|.+.++ ..+.+|.||+|+|..
T Consensus 223 ---~~-------~d-~~~~~~l~~~l~~-~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 223 ---RG-------FD-QQMAELVAASMEE-RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp ---TT-------SC-HHHHHHHHHHHHH-TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred ---cc-------cC-HHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 00 11 1233445555665 688885 8899999765443334666554 379999999999974
No 250
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.49 E-value=0.00035 Score=71.64 Aligned_cols=89 Identities=18% Similarity=0.254 Sum_probs=65.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.. ...
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~-~~~------------------------------------------- 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP-KYM------------------------------------------- 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS-SCC-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC-ccC-------------------------------------------
Confidence 369999999999999999999999999999752 110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~ 157 (637)
+ +. . +.+.+.+ .+++++ +++|+++..+++++.+|.+. +|. .+.+|.||+|+|.
T Consensus 192 ---~---------~~-~----l~~~l~~-~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 192 ---C---------EN-A----YVQEIKK-RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp ---S---------CH-H----HHHHHHH-TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred ---C---------CH-H----HHHHHhc-CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 0 00 0 1122223 688885 88999997665556677765 563 7899999999987
No 251
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.49 E-value=0.00055 Score=69.60 Aligned_cols=90 Identities=21% Similarity=0.247 Sum_probs=68.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+.+|..+++.|.+|+++++... +.
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~-~~------------------------------------------- 183 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDE-FR------------------------------------------- 183 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS-CB-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC-CC-------------------------------------------
Confidence 3699999999999999999999999999998521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe--cce--EEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK--IGI--KFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~--~g~--~i~a~~VIlAtG~ 157 (637)
.+... +.+.++ ..+++++ ++.|.++..+++++.+|.+. +|. .+.+|.||+|+|.
T Consensus 184 ------------~~~~~----~~~~~~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 184 ------------AAPST----VEKVKK-NEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp ------------SCHHH----HHHHHH-CTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred ------------CCHHH----HHHHHh-cCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 00011 112223 3789996 89999998877788777776 674 8999999999997
No 252
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.45 E-value=0.00065 Score=69.86 Aligned_cols=89 Identities=17% Similarity=0.328 Sum_probs=65.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+++|..+++.|.+|+++++.. .+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~------------------------------------------- 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD-TLR------------------------------------------- 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCC-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC-cCC-------------------------------------------
Confidence 369999999999999999999999999999852 110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cce--EEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IGI--KFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g~--~i~a~~VIlAtG~ 157 (637)
+ +. .+.+.+.+..+++++ +++|+++.. ++++.+|.+. +|. ++.+|.||+|+|.
T Consensus 189 ---~---------~~-----~~~~~l~~~~gv~i~~~~~v~~i~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 189 ---A---------NK-----VAQARAFANPKMKFIWDTAVEEIQG-ADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp ---S---------CH-----HHHHHHHTCTTEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ---c---------ch-----HHHHHHHhcCCceEecCCceEEEcc-CCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 0 00 011223333689986 889999975 4556667765 563 7899999999986
No 253
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.43 E-value=9.6e-05 Score=81.15 Aligned_cols=39 Identities=33% Similarity=0.435 Sum_probs=34.4
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
..+||+|||||++|++||+.|++.|++|+|+|+....+|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 358999999999999999999999999999999744444
No 254
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.42 E-value=0.00097 Score=73.09 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=66.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeeccc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSS 87 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~ 87 (637)
.|+|||||..|++.|..+++.|.+|+++++.. ..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l--------------------------------------------- 220 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PL--------------------------------------------- 220 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS---------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cc---------------------------------------------
Confidence 69999999999999999999999999998741 10
Q ss_pred cCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---ce--EEEeceEEEecccc
Q psy9395 88 KGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---GI--KFFSKTVILTTGTF 158 (637)
Q Consensus 88 ~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g~--~i~a~~VIlAtG~~ 158 (637)
+. ++ ..+.+.+.+.+++ .+++++ ++.|.++...++....|.+.+ |+ ++.+|.||+|+|-.
T Consensus 221 --~~-------~d-~~~~~~l~~~l~~-~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 221 --RG-------FD-QQMSSLVTEHMES-HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp --TT-------SC-HHHHHHHHHHHHH-TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred --cc-------CC-HHHHHHHHHHHHH-CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 00 11 1234445555665 788885 888999876433333355543 44 57899999999973
No 255
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.41 E-value=0.00011 Score=78.30 Aligned_cols=38 Identities=18% Similarity=0.341 Sum_probs=33.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
+||+|||||++|++||+.|++.|++|+|+|+....+|.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 79999999999999999999999999999997444443
No 256
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.40 E-value=0.0006 Score=73.85 Aligned_cols=94 Identities=21% Similarity=0.255 Sum_probs=68.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++.......
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR------------------------------------------ 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------------------
Confidence 37999999999999999999999999999986211100
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.++ ..+.+.+.+.+++ . +++ .++.|.++..++ ++..+ ..++.++.+|.||+|+|..
T Consensus 187 -----------~~~-~~~~~~l~~~l~~-~-v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 187 -----------SFD-KEVTDILEEKLKK-H-VNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp -----------TSC-HHHHHHHHHHHTT-T-SEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEE
T ss_pred -----------hcC-HHHHHHHHHHHHh-C-cEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCc
Confidence 011 1244556666666 4 888 488899886443 44334 4467789999999999984
No 257
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.38 E-value=0.00045 Score=74.74 Aligned_cols=91 Identities=22% Similarity=0.178 Sum_probs=66.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+|+++..... .
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-~------------------------------------------ 184 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-K------------------------------------------ 184 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-T------------------------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-c------------------------------------------
Confidence 369999999999999999999999999999863111 0
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
. .+ ..+.+.+.+.+++ .+++++ +++|.++. ... +.+.+|+++.+|.||+|+|..
T Consensus 185 ----~-------~d-~~~~~~~~~~l~~-~gV~i~~~~~v~~~~--~~~---v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 185 ----L-------MD-ADMNQPILDELDK-REIPYRLNEEINAIN--GNE---ITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp ----T-------SC-GGGGHHHHHHHHH-TTCCEEESCCEEEEE--TTE---EEETTSCEEECSEEEECCCEE
T ss_pred ----c-------cc-chhHHHHHHHhhc-cceEEEeccEEEEec--CCe---eeecCCeEEeeeeEEEEecee
Confidence 0 00 0122334445555 688884 88888774 333 667888999999999999974
No 258
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.37 E-value=0.00088 Score=69.99 Aligned_cols=101 Identities=19% Similarity=0.262 Sum_probs=67.6
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeeccc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSS 87 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~ 87 (637)
.|+|||||..|+++|..+++.|.+|+++++....... . .+
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~-----------------~-----------~d------------ 207 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP-----------------D-----------AD------------ 207 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------------
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC-----------------C-----------CC------------
Confidence 6999999999999999999999999999985211000 0 00
Q ss_pred cCchhhhhhhccCHHHHHHHHHHHHHhcCC-eEEE-cceeEEEEEeCCeEEEEEEecceEEE-eceEEEecccc
Q psy9395 88 KGAAVRATRAQVDRILYKQAIRFYLENQLN-LYLF-QEEVDDLIIKTNKILGVVTKIGIKFF-SKTVILTTGTF 158 (637)
Q Consensus 88 ~gp~~~~~~~~~d~~~~~~~l~~~l~~~~g-v~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~-a~~VIlAtG~~ 158 (637)
+.. ... ..+.+.+.+.+++ .+ ++++ ++.|.++..+++. ..|.+.+|..+. +|.||+|||..
T Consensus 208 --~~~-----~~~-~~~~~~l~~~l~~-~g~v~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 208 --PSV-----RLS-PYTRQRLGNVIKQ-GARIEMNVHYTVKDIDFNNGQ-YHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp --CTT-----SCC-HHHHHHHHHHHHT-TCCEEEECSCCEEEEEEETTE-EEEEESSSCCEEESSCCEECCCBC
T ss_pred --CCc-----cCC-HHHHHHHHHHHhh-CCcEEEecCcEEEEEEecCCc-eEEEecCCeEeccCCceEEeeccC
Confidence 000 011 1234455556665 54 9986 8899998655554 457777886665 59999999974
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.37 E-value=0.00081 Score=69.26 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=65.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++... +.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~------------------------------------------- 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA-FR------------------------------------------- 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS-CC-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc-CC-------------------------------------------
Confidence 3799999999999999999999999999998521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCC--eEEEEEEe---cc--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTN--KILGVVTK---IG--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~--~v~gV~~~---~g--~~i~a~~VIlAtG~ 157 (637)
+ . ..+.+.+.+..+++++ +++|.++..+++ ++.+|.+. +| .++.+|.||+|+|.
T Consensus 196 ---~---------~-----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 196 ---A---------S-----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp ---S---------C-----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ---c---------c-----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 0 0 0011112223789986 889999976554 56566665 34 57999999999997
No 260
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.33 E-value=0.00067 Score=75.11 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=67.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+++++... +.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~-l~------------------------------------------- 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MK------------------------------------------- 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS-CC-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc-cC-------------------------------------------
Confidence 3699999999999999999999999999997521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---c--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---G--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g--~~i~a~~VIlAtG~ 157 (637)
.+ ..+.+.+.+..|++++ ++.|+++..+++++.+|.+.+ | ..+.+|.||+|+|.
T Consensus 392 ------------~~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 392 ------------AD-----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp ------------SC-----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------------cC-----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 00 1123334444689986 889999976666777777654 4 37899999999997
No 261
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.32 E-value=0.0011 Score=72.19 Aligned_cols=93 Identities=20% Similarity=0.282 Sum_probs=65.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|++.|..+++.|.+|+++++.....
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------------------- 208 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------------------- 208 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC--------------------------------------------
Confidence 369999999999999999999999999999863111
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC-CeEEEEEEe--cce--EEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT-NKILGVVTK--IGI--KFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~-~~v~gV~~~--~g~--~i~a~~VIlAtG~~ 158 (637)
|. ..+. .+.+.+.+.++ ++++ ++.|+++..++ +++. |.+. +|. ++.+|.||+|+|..
T Consensus 209 ---~~------~~d~-~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 209 ---IT------LEDQ-DIVNTLLSILK----LNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp ---TT------SCCH-HHHHHHHHHHC----CCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEECCCEE
T ss_pred ---CC------CCCH-HHHHHHHhcCE----EEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEECcCCC
Confidence 00 0011 22333333332 7775 78899997665 5553 6665 564 89999999999973
No 262
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.32 E-value=7.9e-05 Score=82.91 Aligned_cols=34 Identities=29% Similarity=0.530 Sum_probs=31.8
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..||+||||||.||+.+|..|++ |.+|+|||++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCC
Confidence 45999999999999999999999 99999999874
No 263
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.27 E-value=0.00099 Score=67.90 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=66.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+++|..+++.|.+|+++++.....
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------------- 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-------------------------------------------- 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC--------------------------------------------
Confidence 469999999999999999999999999999852110
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---ce--EEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---GI--KFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g~--~i~a~~VIlAtG~ 157 (637)
+ +. .+.+.+.+..+++++ ++.|.++..+ +++.+|.+.+ |. .+.+|.||+|+|.
T Consensus 191 ---~---------~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 191 ---A---------QP-----IYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp ---S---------CH-----HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ---c---------CH-----HHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 0 00 011223333689986 7789998755 5566777765 64 7999999999997
No 264
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.26 E-value=0.00023 Score=77.70 Aligned_cols=39 Identities=33% Similarity=0.342 Sum_probs=33.3
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCC-cEEEEccCCCCCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNIDTIG 43 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~~~~G 43 (637)
+.+||+|||||++|+.||+.|++.|. +|+|+|++....|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 35899999999999999999999999 8999999744444
No 265
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.25 E-value=0.00017 Score=80.30 Aligned_cols=51 Identities=25% Similarity=0.250 Sum_probs=40.2
Q ss_pred HHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec---ce--EE---EeceEEEecccc
Q psy9395 108 IRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI---GI--KF---FSKTVILTTGTF 158 (637)
Q Consensus 108 l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~---g~--~i---~a~~VIlAtG~~ 158 (637)
+.+.+.+.+|++++ ++.|++|..+++++.||.+.+ |. ++ .++.||+|+|++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 44445545799996 899999999888999998865 52 33 789999999997
No 266
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.22 E-value=0.00024 Score=82.00 Aligned_cols=34 Identities=35% Similarity=0.418 Sum_probs=32.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.+||+|||||+||++||..|++.|++|+|+|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999963
No 267
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.19 E-value=0.0021 Score=71.50 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=30.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||+|..|+.+|..+++.|.+|+++++.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 469999999999999999999999999999874
No 268
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.17 E-value=0.00052 Score=69.19 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=62.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+++|..+++.| +|+++++....
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~--------------------------------------------- 175 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE--------------------------------------------- 175 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC---------------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC---------------------------------------------
Confidence 46999999999999999999999 99999875210
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~ 157 (637)
++ ..+.+.+++ .+++++.+.|.++.. +. .|.+.+|..+.+|.||+|+|.
T Consensus 176 ------------~~-----~~~~~~l~~-~gv~i~~~~v~~i~~--~~--~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 176 ------------PD-----ADQHALLAA-RGVRVETTRIREIAG--HA--DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp ------------CC-----HHHHHHHHH-TTCEEECSCEEEEET--TE--EEEETTSCEEEESEEEECCEE
T ss_pred ------------CC-----HHHHHHHHH-CCcEEEcceeeeeec--CC--eEEeCCCCEEEEEEEEEccCc
Confidence 00 011233333 688888788888853 22 577888889999999999997
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.14 E-value=0.0015 Score=71.91 Aligned_cols=93 Identities=20% Similarity=0.185 Sum_probs=64.3
Q ss_pred cEEEECcchHHHHHHHHHhhCC--------------CcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHH
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG--------------QKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIA 73 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G--------------~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~ 73 (637)
.++|||||+.|++.|..++..+ .+|+|+|..+...
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 5999999999999999987543 6799998753111
Q ss_pred HhhcCCeEeeeccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeE-EEEEEecc----eEEE
Q psy9395 74 TDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKI-LGVVTKIG----IKFF 147 (637)
Q Consensus 74 ~~~~gi~~~~l~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v-~gV~~~~g----~~i~ 147 (637)
|. ++ ..+.+.+.+.+++ .||+++ ++.|+++. ++.+ ..+...+| +++.
T Consensus 268 ----------------~~-------~~-~~~~~~~~~~L~~-~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ 320 (502)
T 4g6h_A 268 ----------------NM-------FE-KKLSSYAQSHLEN-TSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIP 320 (502)
T ss_dssp ----------------TT-------SC-HHHHHHHHHHHHH-TTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEE
T ss_pred ----------------cC-------CC-HHHHHHHHHHHHh-cceeeecCceEEEEe--CCceEEEEEecCcccceeeec
Confidence 10 11 2345556666766 789995 88999884 3333 33334454 4799
Q ss_pred eceEEEecccc
Q psy9395 148 SKTVILTTGTF 158 (637)
Q Consensus 148 a~~VIlAtG~~ 158 (637)
||.||.|+|..
T Consensus 321 ad~viwa~Gv~ 331 (502)
T 4g6h_A 321 YGTLIWATGNK 331 (502)
T ss_dssp CSEEEECCCEE
T ss_pred cCEEEEccCCc
Confidence 99999999973
No 270
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.14 E-value=0.0032 Score=70.78 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|+|||||..|+++|..+++.|.+|+++++.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999999999974
No 271
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.10 E-value=0.00046 Score=79.13 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=63.9
Q ss_pred cEEEEC--cchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeec
Q psy9395 8 DVIVVG--GGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILN 85 (637)
Q Consensus 8 DViVIG--gG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~ 85 (637)
+|+||| ||..|+++|..+++.|.+|+++++... +.... .
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~-l~~~~--------------------~------------------ 565 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ-VSSWT--------------------N------------------ 565 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS-TTGGG--------------------G------------------
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc-ccccc--------------------c------------------
Confidence 599999 999999999999999999999998521 10000 0
Q ss_pred cccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEE---EecceEEEeceEEEecccc
Q psy9395 86 SSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVV---TKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 86 ~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~---~~~g~~i~a~~VIlAtG~~ 158 (637)
+ ..+...+.+.+++ .|++++ +++|+++.. +.+ .+. +.++.++.||.||+|+|..
T Consensus 566 ----~-----------~~~~~~l~~~l~~-~GV~i~~~~~V~~i~~--~~~-~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 566 ----N-----------TFEVNRIQRRLIE-NGVARVTDHAVVAVGA--GGV-TVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp ----G-----------GTCHHHHHHHHHH-TTCEEEESEEEEEEET--TEE-EEEETTTCCEEEEECSEEEEESCEE
T ss_pred ----c-----------chhHHHHHHHHHH-CCCEEEcCcEEEEEEC--CeE-EEEEccCCeEEEEECCEEEECCCCC
Confidence 0 0012334445555 789985 889999863 322 232 2245689999999999984
No 272
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.08 E-value=0.00035 Score=74.31 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||||..|+++|..+++.|.+|+++++.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~ 178 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIIL 178 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcC
Confidence 36999999999999999999999999999986
No 273
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.05 E-value=0.00055 Score=77.09 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=34.6
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCC
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNID 40 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~ 40 (637)
|+.+|||+|||+|..|+..|..|++.|++|++||++..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 44569999999999999999999999999999999843
No 274
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.02 E-value=0.0005 Score=78.46 Aligned_cols=38 Identities=29% Similarity=0.332 Sum_probs=33.8
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
.+||+|||||++|++||+.|++.|++|+|+|+....+|
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 47999999999999999999999999999999744333
No 275
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.02 E-value=0.0058 Score=67.50 Aligned_cols=94 Identities=17% Similarity=0.091 Sum_probs=63.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeeccc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNSS 87 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~~ 87 (637)
.|+|||||..|++.|..+++.|.+|+++++. ...
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l--------------------------------------------- 245 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL--------------------------------------------- 245 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS---------------------------------------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc---------------------------------------------
Confidence 5999999999999999999999999999873 110
Q ss_pred cCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeC----CeEE-EEEEecc---eEEEeceEEEecccc
Q psy9395 88 KGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKT----NKIL-GVVTKIG---IKFFSKTVILTTGTF 158 (637)
Q Consensus 88 ~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~----~~v~-gV~~~~g---~~i~a~~VIlAtG~~ 158 (637)
+. +| ..+.+.+.+.+++ .+++++ ++.++++...+ +.+. .+...+| ..+.+|.||+|+|..
T Consensus 246 --~~-------~d-~~~~~~~~~~l~~-~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 246 --RG-------FD-QDMANKIGEHMEE-HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp --TT-------SC-HHHHHHHHHHHHH-TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred --cc-------CC-HHHHHHHHHHHHH-CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 00 11 1234445555655 788885 77777775432 3322 1223344 367899999999974
No 276
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.01 E-value=0.00052 Score=74.70 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=34.7
Q ss_pred cCccccccCCCCEEEEEee-cCCCCHH-HHHHHHHHHHHHHHHHhC
Q psy9395 354 LKSSLETKQIHGLFFAGQI-NGTTGYE-EAASQGLLAGLNAALFSQ 397 (637)
Q Consensus 354 l~~tlesk~v~gLf~aGei-~G~~Gy~-eA~a~G~~AG~naa~~~~ 397 (637)
+|..++...+||+|++||+ .|+.|.. .|..+|..|+.|+...+.
T Consensus 342 vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 342 PNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp CEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3456664469999999999 5777754 799999999999987653
No 277
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.99 E-value=0.0035 Score=69.67 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=30.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||+|..|+..|..+++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 369999999999999999999999999999974
No 278
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.98 E-value=0.0013 Score=67.86 Aligned_cols=89 Identities=17% Similarity=0.251 Sum_probs=62.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|++.|..+++.|.+|+++++... +.. .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~-~~~----------------------~------------------- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE-FRA----------------------S------------------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS-CSS----------------------C-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc-CCc----------------------c-------------------
Confidence 4799999999999999999999999999998521 100 0
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEe---cc--eEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTK---IG--IKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~---~g--~~i~a~~VIlAtG~ 157 (637)
. .+. .+.++ ..+++++ +++|.++..++ ++.+|.+. +| ..+.+|.||+|+|.
T Consensus 194 ---~------------~~~---~~~~~-~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 194 ---K------------IML---DRARN-NDKIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp ---T------------THH---HHHHH-CTTEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred ---H------------HHH---HHHhc-cCCcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 0 011 11122 3789986 88899987544 34445544 34 58999999999997
No 279
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.89 E-value=0.0039 Score=63.75 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=63.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||+|..|+.+|..+++.|.+|+++++... +.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~-~~------------------------------------------- 190 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK-FR------------------------------------------- 190 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS-CS-------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc-CC-------------------------------------------
Confidence 3699999999999999999999999999998521 10
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEec-----ceEEEeceEEEeccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKI-----GIKFFSKTVILTTGT 157 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~-----g~~i~a~~VIlAtG~ 157 (637)
+. .... +.+++ .+++++ ++.|.++..+++ +.+|.+.+ +.++.+|.||+|+|.
T Consensus 191 ---~~----------~~~~----~~l~~-~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 191 ---AH----------EHSV----ENLHA-SKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp ---SC----------HHHH----HHHHH-SSCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred ---cc----------HHHH----HHHhc-CCeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 00 0001 11233 688886 788999876554 55566655 467999999999997
No 280
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.89 E-value=0.0045 Score=62.93 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=34.0
Q ss_pred ccccccCCCCEEEEEeecCCCC--HHHHHHHHHHHHHHHHHHhC
Q psy9395 356 SSLETKQIHGLFFAGQINGTTG--YEEAASQGLLAGLNAALFSQ 397 (637)
Q Consensus 356 ~tlesk~v~gLf~aGei~G~~G--y~eA~a~G~~AG~naa~~~~ 397 (637)
+.|||+ +||+|+|||+++..+ ...|+++|.+||.+|.++++
T Consensus 270 ~~~~Ts-~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 270 EGPKTS-VDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp BTTBCS-STTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccC-CCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 456766 999999999977653 55899999999999998874
No 281
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.88 E-value=0.0028 Score=70.57 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||+|..|+.+|..+++.|.+|+++++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 369999999999999999999999999999974
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.87 E-value=0.00075 Score=78.81 Aligned_cols=38 Identities=29% Similarity=0.332 Sum_probs=33.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G 43 (637)
.+||+|||||++|++||+.|++.|++|+|+|+....+|
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 47999999999999999999999999999998743333
No 283
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.86 E-value=0.00075 Score=74.48 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=32.7
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..||+||||||++|+.+|..|++.|.+|+|||+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46999999999999999999999999999999863
No 284
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.77 E-value=0.00085 Score=73.10 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=36.8
Q ss_pred cCccccccCCCCEEEEEee-cCCCC-HHHHHHHHHHHHHHHHHHhCC
Q psy9395 354 LKSSLETKQIHGLFFAGQI-NGTTG-YEEAASQGLLAGLNAALFSQD 398 (637)
Q Consensus 354 l~~tlesk~v~gLf~aGei-~G~~G-y~eA~a~G~~AG~naa~~~~~ 398 (637)
+|..+++..+||+|++||+ .|..| ...|..+|..||.|++..+.+
T Consensus 350 vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 350 PNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 4567887768999999999 46777 448999999999999876644
No 285
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.57 E-value=0.0039 Score=67.32 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCc-EEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQK-TLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~-V~LiE~~ 38 (637)
-+|+|||||.+|+..|..+++.|.+ |+|+++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 3699999999999999999999999 9999985
No 286
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.55 E-value=0.0048 Score=67.14 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||||.+|+..|..+++.|.+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 36999999999999999999999999999975
No 287
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.48 E-value=0.017 Score=69.17 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=29.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
.|+|||||..|+.+|..+++.|. +|+++++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRK 365 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEec
Confidence 79999999999999999999997 89999985
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.48 E-value=0.0053 Score=72.97 Aligned_cols=89 Identities=13% Similarity=0.074 Sum_probs=66.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
-.|+|||||..|+++|..+++.|.+|+|+++... +
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~-~-------------------------------------------- 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS-I-------------------------------------------- 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS-C--------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc-c--------------------------------------------
Confidence 3699999999999999999999999999998521 0
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEE-cceeEEEEEe-CCeEEEEEEec-------c--eEEEeceEEEec
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLF-QEEVDDLIIK-TNKILGVVTKI-------G--IKFFSKTVILTT 155 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~-~~~V~~i~~~-~~~v~gV~~~~-------g--~~i~a~~VIlAt 155 (637)
.. . .+.+++ .|+.++ ++.|+++..+ ++++.+|.+.+ | .++.+|.||+|+
T Consensus 320 ---~~----------~------~~~l~~-~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~ 379 (965)
T 2gag_A 320 ---SA----------A------AAQAVA-DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAG 379 (965)
T ss_dssp ---CH----------H------HHHHHH-TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEEC
T ss_pred ---ch----------h------HHHHHh-CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECC
Confidence 00 0 122333 688885 8889998753 55666676654 4 689999999999
Q ss_pred ccccC
Q psy9395 156 GTFLN 160 (637)
Q Consensus 156 G~~~~ 160 (637)
|-.++
T Consensus 380 G~~P~ 384 (965)
T 2gag_A 380 GFNPV 384 (965)
T ss_dssp CEEEC
T ss_pred CcCcC
Confidence 97443
No 289
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.30 E-value=0.014 Score=63.32 Aligned_cols=32 Identities=9% Similarity=0.231 Sum_probs=28.6
Q ss_pred ccEEEECcchHHHHHHHHHh--------------------hCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSA--------------------RMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA--------------------~~G~-~V~LiE~~ 38 (637)
-.|+|||||..|+.+|..|+ +.|. +|+|+++.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~ 198 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRR 198 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcC
Confidence 47999999999999999999 6787 69999985
No 290
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.28 E-value=0.0091 Score=64.81 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCc-EEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQK-TLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~-V~LiE~~ 38 (637)
-+|+|||||..|+.+|..+.+.|.+ |+++++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~ 297 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRR 297 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeC
Confidence 3699999999999999999999985 9999885
No 291
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.21 E-value=0.0046 Score=71.30 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=29.9
Q ss_pred ccEEEEC--cchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVG--GGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIG--gG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+||| ||..|+++|..|++.|.+|+|+++.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~ 562 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 562 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc
Confidence 3799999 9999999999999999999999985
No 292
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.18 E-value=0.0094 Score=64.68 Aligned_cols=32 Identities=19% Similarity=0.407 Sum_probs=27.9
Q ss_pred ccEEEECcchHHHHHHHHHhhC--------------------C-CcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--------------------G-QKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--------------------G-~~V~LiE~~ 38 (637)
-.|+|||+|..|+.+|..|++. | .+|+|+++.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~ 200 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR 200 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecC
Confidence 3699999999999999999874 5 489999985
No 293
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.01 E-value=0.0057 Score=62.21 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=62.8
Q ss_pred cEEEECcch-HHHHHHHHHhhCCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeeecc
Q psy9395 8 DVIVVGGGH-AGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRILNS 86 (637)
Q Consensus 8 DViVIGgG~-AGl~AA~~lA~~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l~~ 86 (637)
.++|||||. +++++|..+++.|.+|+++++... .
T Consensus 148 ~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~-~-------------------------------------------- 182 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE-L-------------------------------------------- 182 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC-C--------------------------------------------
T ss_pred ceeeecCCCchhhhHHHHHHhCCceEEEEecccc-c--------------------------------------------
Confidence 577777775 678999999999999999976411 0
Q ss_pred ccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 87 SKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 87 ~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
. ..+.+.+.+ .++.++...+..+..+++++.+|.+.+|.++.++.+|+++|+.
T Consensus 183 ---~---------------~~~~~~l~~-~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 183 ---S---------------QTIMDELSN-KNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp ---C---------------HHHHHHHHT-TTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred ---h---------------hhhhhhhhc-cceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccc
Confidence 0 011222333 5777776667777766777778889999999999999999874
No 294
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.99 E-value=0.0023 Score=72.91 Aligned_cols=34 Identities=21% Similarity=0.436 Sum_probs=31.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCC--------CcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMG--------QKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G--------~~V~LiE~~~ 39 (637)
..+|+|||||++|++||+.|++.| ++|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999998 9999999974
No 295
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.96 E-value=0.071 Score=54.00 Aligned_cols=31 Identities=19% Similarity=0.486 Sum_probs=29.8
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|+|||||..|+++|..+++.|.+|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 6999999999999999999999999999985
No 296
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.96 E-value=0.0074 Score=62.14 Aligned_cols=31 Identities=19% Similarity=0.500 Sum_probs=28.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||||..|+++|..+++.| +|+++.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 47999999999999999999998 69999875
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.62 E-value=0.046 Score=62.25 Aligned_cols=28 Identities=25% Similarity=0.386 Sum_probs=25.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEE
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLL 34 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~L 34 (637)
-.|+|||||..|+++|..+++.|.+|++
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 4799999999999999999999987764
No 298
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=94.86 E-value=0.33 Score=53.07 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=28.9
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~~ 39 (637)
..|+|||+|.+|+..|..|++. +.+|+++-+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 3699999999999999999875 78999998863
No 299
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.76 E-value=0.03 Score=49.88 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=30.7
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
+-.|+|+|+|..|...|..|++.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 347999999999999999999999999999985
No 300
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.69 E-value=0.1 Score=55.25 Aligned_cols=49 Identities=14% Similarity=0.208 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhcCCeEEE-cceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 104 YKQAIRFYLENQLNLYLF-QEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 104 ~~~~l~~~l~~~~gv~i~-~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
+...+.+.+++ .|++++ ++.|+++. .+. |.+.+|+++.+|.||+|+|..
T Consensus 220 ~~~~~~~~l~~-~gV~~~~~~~v~~i~--~~~---v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQ-LGIKLVHNFKIKEIR--EHE---IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHH-HTCEEECSCCEEEEC--SSE---EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHH-CCCEEEcCCceEEEC--CCe---EEECCCCEEeeeEEEECCCCC
Confidence 34445555555 689986 78898884 333 677888899999999999974
No 301
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.37 E-value=0.15 Score=56.39 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=30.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||+|..|+..|..+++.|.+|+++++.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 369999999999999999999999999999864
No 302
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.19 E-value=0.043 Score=58.77 Aligned_cols=104 Identities=22% Similarity=0.271 Sum_probs=66.7
Q ss_pred ccEEEECcchHHHHHHHHHhh--CCCcEEEEccCCCCCCcccccCCCCccchhhHHHHHHHhccHHHHHHhhcCCeEeee
Q psy9395 7 FDVIVVGGGHAGTEAALVSAR--MGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGGIMAIATDKSGIQFRIL 84 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~--~G~~V~LiE~~~~~~G~~~cn~s~gg~~~~~l~~el~~~gg~~~~~~~~~gi~~~~l 84 (637)
+||+|||||+||++||..|++ .|++|+|||++.. .+.. + .+ .. ......+...+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~-~~~~---~--------~~-~~------~~~g~~~~~~~----- 58 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY-FGFT---P--------AF-PH------LAMGWRKFEDI----- 58 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE-EECG---G--------GH-HH------HHHTCSCGGGS-----
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC-CCcC---C--------Cc-ch------hccCccCHHHH-----
Confidence 689999999999999999999 8999999999732 1110 0 00 00 00000000000
Q ss_pred ccccCchhhhhhhccCHHHHHHHHHHHHHhcCCeEEEcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 85 NSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 85 ~~~~gp~~~~~~~~~d~~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
...+.+.+++ .+++++.++|+.+..++.. |.+.++..+.+|.+|+|||..
T Consensus 59 --------------------~~~~~~~~~~-~gv~~~~~~v~~id~~~~~---v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 59 --------------------SVPLAPLLPK-FNIEFINEKAESIDPDANT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp --------------------EEESTTTGGG-GTEEEECSCEEEEETTTTE---EEETTCCEEECSEEEECCCCE
T ss_pred --------------------HHHHHHHHHh-cCCEEEEEEEEEEECCCCE---EEECCCcEEECCEEEEcCCcc
Confidence 0001112222 5788887899998765543 566778889999999999985
No 303
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.11 E-value=0.19 Score=53.70 Aligned_cols=48 Identities=17% Similarity=-0.069 Sum_probs=38.1
Q ss_pred ccccccCCCCEEEEEeecCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9395 356 SSLETKQIHGLFFAGQINGTTG-------------YEEAASQGLLAGLNAALFSQDRDPWI 403 (637)
Q Consensus 356 ~tlesk~v~gLf~aGei~G~~G-------------y~eA~a~G~~AG~naa~~~~~~~~~~ 403 (637)
++|++..+||+|++||+++..+ -..|..||..||.|++..+.|+++..
T Consensus 290 ~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 290 EHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp TTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred hhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 4677767999999999965432 23799999999999999999987543
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.10 E-value=0.083 Score=46.36 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|||+|..|...|..|++.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999985
No 305
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.08 E-value=0.087 Score=47.74 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=30.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 306
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.87 E-value=0.088 Score=46.36 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|+|+|..|...|..|.+.|++|++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999985
No 307
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.81 E-value=0.091 Score=53.96 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=30.2
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+-+..-.|.|||+|.+|..-|..+|..|++|+|+|.+
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 44333347999999999999999999999999999975
No 308
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.51 E-value=0.17 Score=45.05 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=30.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||+|..|...|..|.+.|++|+++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36999999999999999999999999999986
No 309
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.40 E-value=0.093 Score=53.84 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..|++.|++|++++++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5999999999999999999999999999985
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.23 E-value=0.097 Score=53.51 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=29.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..|++.|++|++++++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 5999999999999999999999999999985
No 311
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.98 E-value=0.14 Score=51.43 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|.|||+|..|...|..+++.|++|+++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36999999999999999999999999999986
No 312
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.97 E-value=0.18 Score=45.45 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.6
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 6999999999999999999999999999985
No 313
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.91 E-value=0.14 Score=43.33 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCC-CcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMG-QKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~ 38 (637)
..|+|+|+|..|...|..|.+.| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 899999985
No 314
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.64 E-value=0.11 Score=52.71 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=29.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..|++.|.+|++++++
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 5999999999999999999999999999985
No 315
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.17 E-value=0.13 Score=54.93 Aligned_cols=51 Identities=8% Similarity=0.072 Sum_probs=40.6
Q ss_pred cccCccccccCCCCEEEEEeecCCC---------CH----HHHHHHHHHHHHHHHHHhCCCCCC
Q psy9395 352 CNLKSSLETKQIHGLFFAGQINGTT---------GY----EEAASQGLLAGLNAALFSQDRDPW 402 (637)
Q Consensus 352 ~~l~~tlesk~v~gLf~aGei~G~~---------Gy----~eA~a~G~~AG~naa~~~~~~~~~ 402 (637)
..+|++||++..||+|++||++... |. -.|..||..||.|++..+.|+++-
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~~ 338 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3466899988899999999995432 22 168889999999999999998753
No 316
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.95 E-value=0.19 Score=51.53 Aligned_cols=32 Identities=31% Similarity=0.394 Sum_probs=30.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|..-|..+++.|++|+++|++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 317
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.83 E-value=0.22 Score=50.44 Aligned_cols=32 Identities=34% Similarity=0.557 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|.+|...|..+++.|++|+++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 36999999999999999999999999999985
No 318
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.61 E-value=0.25 Score=47.21 Aligned_cols=43 Identities=19% Similarity=0.057 Sum_probs=34.8
Q ss_pred cccccCCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHhCCCC
Q psy9395 357 SLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRD 400 (637)
Q Consensus 357 tlesk~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~~~~~ 400 (637)
.+.+. .+|||+|||..+..|.+.|+.+|..||..++..+++..
T Consensus 289 ~~~~~-~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e~ 331 (336)
T 3kkj_A 289 ALSDA-DLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp SEEET-TTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred ceeeC-CCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhccC
Confidence 44443 79999999997667899999999999999998887653
No 319
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.42 E-value=0.2 Score=51.10 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=28.3
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..|+ .|.+|++++++
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 5999999999999999999 99999999985
No 320
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.40 E-value=0.25 Score=50.87 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 36999999999999999999999999999873
No 321
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.23 E-value=0.21 Score=53.92 Aligned_cols=31 Identities=29% Similarity=0.404 Sum_probs=29.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|+..|..+++.|++|++++++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 5999999999999999999999999999986
No 322
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.14 E-value=0.21 Score=46.33 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhC-CCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARM-GQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~-G~~V~LiE~~ 38 (637)
.|+|||+|..|...|..|.+. |++|+++|++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 699999999999999999999 9999999986
No 323
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.91 E-value=0.31 Score=49.95 Aligned_cols=37 Identities=27% Similarity=0.423 Sum_probs=32.4
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
|+|. .-.|.|||+|..|...|+.++..|+ +|+|+|.+
T Consensus 4 m~~~-~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIK-RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCC-CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccC-CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 6553 2479999999999999999999999 99999985
No 324
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.77 E-value=0.27 Score=50.26 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|+ +|+|+|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 479999999999999999999998 99999986
No 325
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.66 E-value=0.3 Score=50.11 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=30.4
Q ss_pred CCCCC-cccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 1 MLFKS-KFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 1 M~~~~-~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
|.|.+ ...|.|||+|..|...|+.++..|. +|.|+|.+
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 55532 3689999999999999999999987 89999986
No 326
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.59 E-value=0.28 Score=50.69 Aligned_cols=32 Identities=28% Similarity=0.244 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999985
No 327
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.50 E-value=0.31 Score=53.02 Aligned_cols=37 Identities=32% Similarity=0.447 Sum_probs=30.8
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+|+ ...|.|||+|.+|...|..+++.|++|+++|++
T Consensus 1 Msm~-~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 1 MSLN-VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp ---C-CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCC-CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5543 246999999999999999999999999999986
No 328
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.41 E-value=0.27 Score=49.71 Aligned_cols=31 Identities=16% Similarity=0.398 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|++|++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999999999985
No 329
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=89.37 E-value=0.61 Score=50.07 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=36.3
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCCCc
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ 44 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~G~ 44 (637)
|+..+||||||||++|++||+.|++.|++|+|+|++...+|.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 345699999999999999999999999999999998544443
No 330
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.32 E-value=0.33 Score=50.10 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..++..|+ +|+|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 479999999999999999999998 99999986
No 331
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.25 E-value=0.36 Score=50.37 Aligned_cols=32 Identities=44% Similarity=0.543 Sum_probs=30.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|++|++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999999999999999999999999985
No 332
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.97 E-value=0.33 Score=46.49 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|+|||+|..|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999986
No 333
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.94 E-value=0.33 Score=49.12 Aligned_cols=33 Identities=15% Similarity=0.146 Sum_probs=30.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|.|||.|..|...|..+++.|++|++++++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 334
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.94 E-value=0.34 Score=46.94 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||||..|...|-.|.+.|++|+|++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 47999999999999999999999999999864
No 335
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=88.76 E-value=0.36 Score=51.10 Aligned_cols=33 Identities=36% Similarity=0.511 Sum_probs=30.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|+|||||..|+++|..+++.|.+|+++++..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP 185 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC
Confidence 469999999999999999999999999999863
No 336
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.72 E-value=0.36 Score=51.02 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|+|||+|.+|+.+|..|...|++|+++|++.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999863
No 337
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.71 E-value=0.36 Score=48.91 Aligned_cols=38 Identities=34% Similarity=0.356 Sum_probs=30.5
Q ss_pred CCCC-CcccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFK-SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~-~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+++ +...|.|||.|..|...|..+++.|++|++++++
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5443 2347999999999999999999999999999985
No 338
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.69 E-value=0.44 Score=49.48 Aligned_cols=35 Identities=34% Similarity=0.559 Sum_probs=31.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTI 42 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~ 42 (637)
.|+|||||..|.++|+.|.+.|++|+++|.+++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 59999999999999999999999999999875443
No 339
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.18 E-value=0.54 Score=47.72 Aligned_cols=38 Identities=32% Similarity=0.488 Sum_probs=32.4
Q ss_pred CCCCC---cccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFKS---KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~~---~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+|.. +..|.|||.|..|...|..+++.|++|++++++
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 55542 357999999999999999999999999999986
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.11 E-value=0.49 Score=48.58 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..++..|+ +|+|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 479999999999999999999998 99999985
No 341
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.06 E-value=0.47 Score=48.83 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..++..|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 469999999999999999999998 99999986
No 342
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.97 E-value=0.47 Score=47.25 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=29.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|.|||+|..|...|..+++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 48999999999999999999999999999863
No 343
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.97 E-value=0.43 Score=48.61 Aligned_cols=32 Identities=25% Similarity=0.415 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|+|||+|..|...|..+++.|+ +|++++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 469999999999999999999998 99999985
No 344
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.80 E-value=0.37 Score=51.70 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=29.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|.|||.|.+|+++|..|+++|++|++.|...
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 59999999999999999999999999999853
No 345
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=87.66 E-value=0.67 Score=49.46 Aligned_cols=54 Identities=20% Similarity=0.189 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCCeEE-EcceeEEEEEeCCeEEEEEEecceEEEeceEEEecccc
Q psy9395 103 LYKQAIRFYLENQLNLYL-FQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTF 158 (637)
Q Consensus 103 ~~~~~l~~~l~~~~gv~i-~~~~V~~i~~~~~~v~gV~~~~g~~i~a~~VIlAtG~~ 158 (637)
.+.+++.+.+++. |+++ +++.|++|..+++++.+|.+ +|.++.||.||+|+|.+
T Consensus 235 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 235 ELPQGFARLSAIY-GGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYV 289 (433)
T ss_dssp HHHHHHHHHHHHH-TCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGC
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCC
Confidence 5777788877774 5566 69999999988888887764 67899999999999987
No 346
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.65 E-value=0.37 Score=47.54 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|..+|..|++.|. +++|+|..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 469999999999999999999997 89999985
No 347
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.43 E-value=0.55 Score=44.81 Aligned_cols=33 Identities=12% Similarity=0.242 Sum_probs=30.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|.|||+|..|...|..+++.|++|++++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 348
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.16 E-value=0.32 Score=48.66 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|||||..|...|..|.+.|++|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999999999999999999999874
No 349
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.05 E-value=0.49 Score=48.22 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=28.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
.|.|||+|..|...|..++..|+ +|.|+|.+
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 59999999999999999999997 89999975
No 350
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.05 E-value=0.53 Score=50.92 Aligned_cols=31 Identities=29% Similarity=0.396 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|.+|...|..+++.|++|+++|++
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999999999985
No 351
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.95 E-value=0.49 Score=48.62 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999885
No 352
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.91 E-value=0.42 Score=50.15 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|||+|.+|..+|..|...|++|+++|++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999986
No 353
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.72 E-value=0.52 Score=51.17 Aligned_cols=32 Identities=19% Similarity=0.459 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|+..|..+++.|++|++++++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 57999999999999999999999999999985
No 354
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.19 E-value=0.59 Score=50.21 Aligned_cols=35 Identities=11% Similarity=0.321 Sum_probs=32.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNID 40 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~ 40 (637)
...+.|||.|..|+..|..+++.|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36799999999999999999999999999999743
No 355
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.11 E-value=0.56 Score=50.45 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=30.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|.|||.|.+|+++|..|+++|++|++.|.+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 356
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.01 E-value=0.47 Score=45.68 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEE-EccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLL-LSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~L-iE~~ 38 (637)
..|.|||+|..|...|..+++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4799999999999999999999999999 7775
No 357
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.95 E-value=0.62 Score=47.32 Aligned_cols=31 Identities=32% Similarity=0.484 Sum_probs=29.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
.|+|||+|..|...|..++..|+ +|+|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 48999999999999999999998 99999985
No 358
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.93 E-value=0.58 Score=48.81 Aligned_cols=32 Identities=34% Similarity=0.603 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|+|+|.+|..+|..|+..|.+|++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 359
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.88 E-value=0.59 Score=50.32 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|.+|...|..+++.|++|+++|++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 35999999999999999999999999999986
No 360
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.86 E-value=0.53 Score=49.37 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|+|||.||+.+|-.+...|. +|+++|++
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 579999999999999999999999 99999985
No 361
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=85.76 E-value=1 Score=49.65 Aligned_cols=35 Identities=37% Similarity=0.515 Sum_probs=32.9
Q ss_pred CcccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 5 ~~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..||+||||||++|+.+|..|++.|++|+|||++.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45999999999999999999999999999999874
No 362
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.75 E-value=0.52 Score=48.00 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=30.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
+..|.|||.|..|...|..+++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3579999999999999999999999 99999984
No 363
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=85.73 E-value=1 Score=49.10 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=38.4
Q ss_pred HHHhcCCeEEE-cceeEEEEEeC-C-eEEEEEEe--cc-----eEEEeceEEEecccc
Q psy9395 111 YLENQLNLYLF-QEEVDDLIIKT-N-KILGVVTK--IG-----IKFFSKTVILTTGTF 158 (637)
Q Consensus 111 ~l~~~~gv~i~-~~~V~~i~~~~-~-~v~gV~~~--~g-----~~i~a~~VIlAtG~~ 158 (637)
.+.+.+|++++ ++.|++|..++ + +++||... +| .+++|+.||+|+|++
T Consensus 235 ~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 235 QAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp HHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 33444789996 89999999876 4 78999875 45 478999999999996
No 364
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.68 E-value=0.62 Score=49.36 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||+|.+|+.+|..|...|++|+++|++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999985
No 365
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=85.65 E-value=0.46 Score=51.71 Aligned_cols=41 Identities=17% Similarity=0.090 Sum_probs=36.0
Q ss_pred cCccccccCCCCEEEEEeecCCCCHHHHHHHHHHHHHHHHHHh
Q psy9395 354 LKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFS 396 (637)
Q Consensus 354 l~~tlesk~v~gLf~aGei~G~~Gy~eA~a~G~~AG~naa~~~ 396 (637)
+|++|+ .+||+|++||+++......|..+|.+||.|++..+
T Consensus 336 vd~~~~--s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 336 LDEYHR--IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp CCTTSE--EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccccC--cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 567787 58999999999998777799999999999998865
No 366
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=85.53 E-value=0.69 Score=47.26 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=31.5
Q ss_pred CCCCCcccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 1 M~~~~~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
|+..+...|.|||+|..|...|+.++..|. +|.++|.+
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 544344689999999999999999988775 79999985
No 367
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.51 E-value=0.38 Score=50.10 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=29.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..|++.|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999885
No 368
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.46 E-value=0.72 Score=48.48 Aligned_cols=32 Identities=28% Similarity=0.385 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||+|.+|+.+|..|...|++|+++|+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 369
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.44 E-value=0.4 Score=50.66 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=27.4
Q ss_pred cEEEECcchHHHHHHHHHhh-CCCcEEEEc
Q psy9395 8 DVIVVGGGHAGTEAALVSAR-MGQKTLLLS 36 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~-~G~~V~LiE 36 (637)
.|.|||+|..|...|..|++ .|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 59999999999999999998 599999998
No 370
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.04 E-value=0.53 Score=50.95 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~ 38 (637)
..|.|||.|..|+..|..+++. |++|++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999998 8999999985
No 371
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.92 E-value=0.73 Score=47.01 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=28.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..|++.|++|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 36999999999999999999999999999 64
No 372
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.84 E-value=0.67 Score=50.21 Aligned_cols=33 Identities=30% Similarity=0.245 Sum_probs=30.9
Q ss_pred ccEEEECcchHHHHHHHHHhhC-CC-cEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM-GQ-KTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~-G~-~V~LiE~~~ 39 (637)
..|.|||+|..|+..|..+++. |+ +|+++|++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4799999999999999999999 99 999999874
No 373
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.82 E-value=0.91 Score=46.11 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=31.1
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
+..|.|||.|..|...|..+++.|++|++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999863
No 374
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.80 E-value=0.73 Score=46.60 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=29.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|.|||+|.+|..-|..++ .|++|+++|++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 47999999999999999999 99999999986
No 375
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.77 E-value=0.67 Score=47.34 Aligned_cols=32 Identities=13% Similarity=0.029 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCC-CcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMG-QKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~ 38 (637)
..|.|||.|..|...|..+++.| ++|++++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 36999999999999999999999 999999986
No 376
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.73 E-value=1.1 Score=45.41 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|++|++++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 377
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=84.62 E-value=0.69 Score=49.53 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=31.0
Q ss_pred cccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
+..+.|||.|..|+..|..+|+.|++|+.+|.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 468999999999999999999999999999986
No 378
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=84.60 E-value=0.8 Score=45.59 Aligned_cols=32 Identities=13% Similarity=0.278 Sum_probs=29.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..++|+|+|.+|..+|..|++.|.+|++++++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999875
No 379
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.57 E-value=0.38 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||+|..|...|..+++.|.+|++++++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 36999999999999999999999999999885
No 380
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.46 E-value=0.94 Score=45.16 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..++|||+|-+|..+|..|++.|.+|+++.|+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999886
No 381
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=84.46 E-value=0.98 Score=46.33 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..++..|+ +|+|+|.+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 479999999999999999999998 99999986
No 382
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=84.29 E-value=0.62 Score=46.77 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=29.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|++|.+++++
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6999999999999999999999999999885
No 383
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.89 E-value=0.58 Score=47.29 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=28.8
Q ss_pred ccEEEECcchHHHHHHHHHhhC-----C-CcEEEEcc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM-----G-QKTLLLSH 37 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~-----G-~~V~LiE~ 37 (637)
..|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999998 9 99999986
No 384
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.80 E-value=1.2 Score=43.60 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=29.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCC----cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ----KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~----~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|+ +|.+++++
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 59999999999999999999998 99999985
No 385
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.74 E-value=0.83 Score=47.74 Aligned_cols=32 Identities=38% Similarity=0.666 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|+|+|..|..+|..|+..|++|++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999985
No 386
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=83.68 E-value=0.82 Score=46.73 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=28.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|+|||+|..|...|+.++..|. .+.|+|.+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999998885 79999874
No 387
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=83.65 E-value=0.89 Score=43.88 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=30.4
Q ss_pred ccccCCCCEEEEEeecCCC-CHHHHHHHHHHHHHHHHHHh
Q psy9395 358 LETKQIHGLFFAGQINGTT-GYEEAASQGLLAGLNAALFS 396 (637)
Q Consensus 358 lesk~v~gLf~aGei~G~~-Gy~eA~a~G~~AG~naa~~~ 396 (637)
++...+||||++||+. .. -|..|+-||..||.++...+
T Consensus 193 ~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 193 FRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 3433799999999999 55 45588999999999997654
No 388
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.65 E-value=0.76 Score=48.10 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=30.2
Q ss_pred cccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 6 KFDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 6 ~yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
...|+|+|+|.||..+|-.+...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3579999999999999999999998 79999985
No 389
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.62 E-value=0.72 Score=48.21 Aligned_cols=31 Identities=10% Similarity=0.237 Sum_probs=29.3
Q ss_pred cEEEECcchHHHHHHHHHhhCC-------CcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG-------QKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G-------~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.| ++|++++++
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence 5999999999999999999999 999999986
No 390
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=83.27 E-value=1.3 Score=45.84 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=28.8
Q ss_pred ccEEEECc-chHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGG-GHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGg-G~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|+|||+ |..|..+|+.++..|. +|+|+|.+
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 47999997 9999999999999985 89999974
No 391
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.05 E-value=0.86 Score=45.78 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|++|++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57999999999999999999999999999885
No 392
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.99 E-value=1.1 Score=45.67 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=28.4
Q ss_pred cEEEECcchHHHHHHHHHhhC--CCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARM--GQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++. |.+|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999985 7899999986
No 393
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=82.97 E-value=1.3 Score=45.37 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|.|||+|..|...|..++..|. +|.|+|.+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 369999999999999999999988 99999986
No 394
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.86 E-value=0.78 Score=49.09 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=29.3
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|+..|..+++.|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999985
No 395
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=82.60 E-value=1.1 Score=43.72 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 396
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.50 E-value=0.99 Score=47.32 Aligned_cols=32 Identities=41% Similarity=0.622 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||+|..|..+|..|+..|++|++++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999975
No 397
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.37 E-value=1.1 Score=44.79 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=29.8
Q ss_pred ccEEEECc-chHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGG-GHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGg-G~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+ |..|...|..+++.|++|++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 47999999 999999999999999999999885
No 398
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.33 E-value=1 Score=46.00 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|..|...|..+++.|++|++++++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999986
No 399
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.21 E-value=0.87 Score=46.44 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=28.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEcc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSH 37 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~ 37 (637)
.|.|||+|..|...|..+++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 400
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.08 E-value=1.2 Score=44.65 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=29.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|.|||.|..|...|..+++.|++|++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 58999999999999999999999999999863
No 401
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=82.08 E-value=1.1 Score=47.92 Aligned_cols=31 Identities=16% Similarity=0.341 Sum_probs=29.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|+..|..+++ |++|+++|++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 479999999999999999998 9999999986
No 402
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.06 E-value=1.1 Score=45.98 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=29.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||+|..|...|+.++..|. +++|+|.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 579999999999999999999887 89999975
No 403
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=82.06 E-value=1.1 Score=46.04 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 569999999999999999999997 68899875
No 404
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.93 E-value=1 Score=45.42 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|..|...|..+++.|++|++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999985
No 405
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=81.92 E-value=0.97 Score=45.87 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=28.8
Q ss_pred cEEEECcchHHHHHHHHHhhCC--CcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG--QKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G--~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.| .+|+++|++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 5999999999999999999999 789999985
No 406
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.80 E-value=1.4 Score=42.12 Aligned_cols=32 Identities=25% Similarity=0.202 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|++|.+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999885
No 407
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.67 E-value=0.93 Score=45.35 Aligned_cols=32 Identities=22% Similarity=0.153 Sum_probs=29.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|.|||.|..|...|..+++.|++|++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999863
No 408
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=81.41 E-value=1 Score=46.09 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=28.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|+ +|+++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999999998 99999985
No 409
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.40 E-value=1 Score=44.29 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 479999999999999999999997 78999874
No 410
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=81.35 E-value=1.5 Score=47.87 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=30.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|.|||.|.+|...|..+++.|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999863
No 411
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.19 E-value=1.2 Score=44.95 Aligned_cols=32 Identities=9% Similarity=0.179 Sum_probs=29.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|.+|..+|..|++.|. +|+++.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999998 89999885
No 412
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.99 E-value=1.3 Score=45.97 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|.+|...|..+++.|++|++++++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999986
No 413
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=80.98 E-value=1.3 Score=48.07 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|.|||+|.+|...|..+++.|++|++++++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999999999999986
No 414
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=80.94 E-value=1.1 Score=45.22 Aligned_cols=32 Identities=38% Similarity=0.540 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 579999999999999999999996 79999974
No 415
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=80.87 E-value=0.95 Score=45.09 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..++|+|+|.+|..+|..|++.|.+|+++.++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999885
No 416
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.77 E-value=1.1 Score=47.38 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=28.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|+..|..+++ |++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48999999999999999999 9999999985
No 417
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=80.41 E-value=1.3 Score=45.26 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=30.8
Q ss_pred CCCcccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 3 FKSKFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 3 ~~~~yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
|.+...|.|||+|..|...|+.++..+. .+.|+|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4444689999999999999999998876 79999874
No 418
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.39 E-value=1.3 Score=50.74 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=29.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|.+|...|..+++.|++|+++|++
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 5999999999999999999999999999986
No 419
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=80.33 E-value=1.2 Score=45.17 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=29.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||+|.+|...|+.++..|. .|.|+|.+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 469999999999999999999998 89999986
No 420
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.27 E-value=1.2 Score=43.95 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=29.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|+|.|+|..|...+..|.+.|++|+++.++
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 5999999999999999999999999999885
No 421
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=80.22 E-value=1.4 Score=45.14 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=28.9
Q ss_pred ccEEEECcchHHHH-HHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTE-AALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~-AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|.+|++ +|..|+++|++|.+.|..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999997 788899999999999985
No 422
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.18 E-value=1.4 Score=46.69 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
-.|||||.|..|...|-.|.+.|.+|++||++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999873
No 423
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.07 E-value=1.4 Score=41.53 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=28.8
Q ss_pred cEEEEC-cchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVG-GGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIG-gG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.||| +|..|...|..+++.|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999885
No 424
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.06 E-value=1.8 Score=44.77 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|.|||.|..|.+.|..+++.|++|.+++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 425
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=80.04 E-value=1.5 Score=42.85 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCC----CcEEEEccCCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMG----QKTLLLSHNID 40 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G----~~V~LiE~~~~ 40 (637)
..|.|||+|..|...|..+++.| ++|.+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 36999999999999999999999 79999998643
No 426
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=80.00 E-value=1.4 Score=43.27 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCc-EEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQK-TLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~-V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 4799999999999999999999999 8999875
No 427
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.80 E-value=2 Score=42.40 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=30.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|+|.|+|..|...+..|.+.|++|+++.++.
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 59999999999999999999999999999864
No 428
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=79.67 E-value=3.4 Score=46.39 Aligned_cols=55 Identities=18% Similarity=0.226 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCCeEEEcceeEEEEEeC--CeEEEEEEecceEEEeceEEEecc
Q psy9395 102 ILYKQAIRFYLENQLNLYLFQEEVDDLIIKT--NKILGVVTKIGIKFFSKTVILTTG 156 (637)
Q Consensus 102 ~~~~~~l~~~l~~~~gv~i~~~~V~~i~~~~--~~v~gV~~~~g~~i~a~~VIlAtG 156 (637)
..+.++|.+.+..+++...+++.|..|..++ +++.||...+|++++|+.||.+..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 3577888888888555444699999999887 889999877799999999887443
No 429
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.49 E-value=1.6 Score=43.25 Aligned_cols=31 Identities=29% Similarity=0.235 Sum_probs=28.9
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999875
No 430
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=79.49 E-value=1.9 Score=43.44 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=29.4
Q ss_pred cEEEEC-cchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVG-GGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIG-gG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.||| +|..|.+.|..+++.|++|.+++++
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 699999 9999999999999999999999975
No 431
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=79.06 E-value=1.8 Score=42.70 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=29.2
Q ss_pred cEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
.++|||+|-+|.+++..|++.|. +|++++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 69999999999999999999998 89999985
No 432
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=78.90 E-value=1.7 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=29.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..++|+|+|-+|..+|..|++.|. +|+++.|+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 69999885
No 433
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.89 E-value=0.93 Score=48.94 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=30.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|+|+|+|-.|...|-.|...|++|++||++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999874
No 434
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.67 E-value=1.3 Score=47.17 Aligned_cols=32 Identities=28% Similarity=0.340 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
....|||.|..|+..|..+++.|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46889999999999999999999999999986
No 435
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=78.64 E-value=1.7 Score=47.05 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=29.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|+|+|..|..+|..|+..|++|++.|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999999999999999999875
No 436
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=78.59 E-value=1.7 Score=44.36 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
-.++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 89999885
No 437
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=78.49 E-value=1.6 Score=49.91 Aligned_cols=31 Identities=32% Similarity=0.391 Sum_probs=29.6
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|.+|...|..+++.|++|+++|++
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 346 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDIN 346 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECC
Confidence 5999999999999999999999999999986
No 438
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=78.31 E-value=1.6 Score=43.70 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~~ 39 (637)
..++|||+|-+|..+|..|++.|. +|+++.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999998 899998863
No 439
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=78.30 E-value=1.5 Score=42.97 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=28.7
Q ss_pred cEEEECcchHHHHHHHHHhhCC-CcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG-QKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G-~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.| ++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4899999999999999999999 999999885
No 440
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.25 E-value=1.9 Score=42.68 Aligned_cols=31 Identities=32% Similarity=0.341 Sum_probs=28.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 59999999999999999999998 89999875
No 441
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=78.10 E-value=1.9 Score=44.00 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCC----CcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMG----QKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G----~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.| ++|++++++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 36999999999999999999999 799999885
No 442
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.08 E-value=2 Score=46.56 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=30.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.+|.|||.|.+|...|..+++.|++|++++++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999863
No 443
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=78.01 E-value=1.5 Score=44.26 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=28.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
.|.|||+|..|.+.|+.++..|. +|.|+|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 48999999999999999999998 89999985
No 444
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=77.99 E-value=1.8 Score=43.66 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|.+|..+|..|...|.+|+++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999985
No 445
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=77.94 E-value=2.1 Score=46.35 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|.|||+|.+|...|..+++.|++|++++++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 47999999999999999999999999999985
No 446
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=77.94 E-value=1.9 Score=46.70 Aligned_cols=31 Identities=39% Similarity=0.420 Sum_probs=29.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
+|.|||+|.+|...|..+++.|++|++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999985
No 447
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=77.85 E-value=1.4 Score=47.90 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~ 38 (637)
..|.|||.|..|+..|..+++. |++|++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999998 7999999985
No 448
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.85 E-value=1.6 Score=47.05 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=29.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|||||..|...|..|.+.|++|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 46999999999999999999999999999974
No 449
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=77.48 E-value=2.4 Score=42.24 Aligned_cols=32 Identities=13% Similarity=0.284 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC---cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ---KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~---~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|+ +|++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 369999999999999999999998 99999986
No 450
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=77.43 E-value=1.7 Score=49.75 Aligned_cols=31 Identities=29% Similarity=0.396 Sum_probs=29.6
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|.+|..-|..+|..|++|+|+|.+
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~ 348 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAVESD 348 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcccch
Confidence 6999999999999999999999999999975
No 451
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=77.43 E-value=1.6 Score=43.69 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=28.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.++|+|+|.+|.++|..|++.| +|++++++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 35999999999999999999999 99999875
No 452
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.36 E-value=2.5 Score=42.96 Aligned_cols=32 Identities=31% Similarity=0.304 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||.|..|...|..+++.|+ +|++++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 469999999999999999999999 99999985
No 453
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=77.35 E-value=2 Score=44.16 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||+|..|...|+.++..|. .+.|+|.+
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 479999999999999999999987 89999975
No 454
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=77.24 E-value=1.1 Score=46.04 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=29.3
Q ss_pred cEEEECcchHHHHHHHHHhhCC-------CcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMG-------QKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G-------~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.| ++|++++++
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 6999999999999999999999 899999986
No 455
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.20 E-value=2.1 Score=40.55 Aligned_cols=33 Identities=12% Similarity=0.244 Sum_probs=30.1
Q ss_pred ccEEEECc-chHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGG-GHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGg-G~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|+|.|| |..|...+..|.+.|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 46999996 9999999999999999999999864
No 456
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=77.18 E-value=1.9 Score=47.83 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 359 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 579999999999999999999997 79999975
No 457
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=77.18 E-value=1.7 Score=43.16 Aligned_cols=30 Identities=30% Similarity=0.263 Sum_probs=28.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++ |++|++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 49999999999999999999 9999999985
No 458
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=77.11 E-value=2 Score=43.20 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|..|..+|..|...|.+|+++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999985
No 459
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=77.03 E-value=1.8 Score=47.84 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 579999999999999999999997 79999874
No 460
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.99 E-value=1.6 Score=45.37 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 469999999999999999999997 79999974
No 461
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=76.86 E-value=2.8 Score=40.29 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=30.7
Q ss_pred CCCC-CcccEEEECc-chHHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFK-SKFDVIVVGG-GHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~-~~yDViVIGg-G~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+|+ +.--|+|.|| |..|...|..+++.|++|+++.++
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5553 2235888887 789999999999999999999875
No 462
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=76.86 E-value=1.7 Score=44.60 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||+|..|...|+.++..|. .|.|+|.+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 479999999999999999999997 89999975
No 463
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=76.81 E-value=1.7 Score=44.87 Aligned_cols=32 Identities=28% Similarity=0.259 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+++|..|++.|. +++|+|..
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 579999999999999999999997 79999874
No 464
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=76.68 E-value=2.2 Score=46.31 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=30.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+|.|||+|.+|...|..+++.|++|++++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36999999999999999999999999999986
No 465
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=76.57 E-value=1.8 Score=43.13 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=29.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|||+|.+|...|..|++.|.+|++++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999885
No 466
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=76.29 E-value=2.3 Score=42.38 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=29.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
-.++|+|+|-+|..+|..|++.|. +|+++.|+
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 469999999999999999999996 89999885
No 467
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=76.14 E-value=2 Score=42.86 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=29.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|...|..+++.|++|++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4899999999999999999999999999985
No 468
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=76.12 E-value=2.2 Score=41.72 Aligned_cols=32 Identities=6% Similarity=0.150 Sum_probs=29.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++.|..|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 46999999999999999999999999999885
No 469
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=75.62 E-value=2.6 Score=41.46 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=29.1
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.+.|||+|.+|...|..+++.|.+|++++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999999875
No 470
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=75.56 E-value=2.3 Score=43.27 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=29.2
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
-.++|+|+|-+|.++|.+|++.|. +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 469999999999999999999998 79999885
No 471
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=75.43 E-value=2.1 Score=43.69 Aligned_cols=29 Identities=21% Similarity=0.181 Sum_probs=28.0
Q ss_pred EEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 9 ViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|.||||| .|++.+.+|.+.|.+|++++.+
T Consensus 5 I~~lGsg-l~~~~~~aAk~lG~~viv~d~~ 33 (320)
T 2pbz_A 5 VSTIASH-SSLQILLGAKKEGFKTRLYVSP 33 (320)
T ss_dssp EEEESST-THHHHHHHHHHTTCCEEEEECT
T ss_pred EEEEcCH-hHHHHHHHHHHCCCEEEEEECC
Confidence 9999999 9999999999999999999986
No 472
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=75.37 E-value=2.3 Score=44.57 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=30.0
Q ss_pred ccEEEECc-chHHHHHHHHHhhCCC---cEEEEccC
Q psy9395 7 FDVIVVGG-GHAGTEAALVSARMGQ---KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGg-G~AGl~AA~~lA~~G~---~V~LiE~~ 38 (637)
..|+|||| |.+|..|+-.|...|+ .|+++|.+
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~ 250 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIK 250 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecc
Confidence 57999999 9999999999999998 99999986
No 473
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=75.16 E-value=2.2 Score=43.52 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=28.5
Q ss_pred cEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
.|.|||+|..|...|+.++..|. .+.|+|.+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 48999999999999999999887 89999986
No 474
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=74.98 E-value=2 Score=43.05 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..++|+|+|-+|.++|..|++.|. +|+++.|.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 469999999999999999999998 89999885
No 475
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=74.94 E-value=2.5 Score=45.06 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|..|+.+|..|++.|. +++|+|..
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 579999999999999999999997 79999974
No 476
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=74.91 E-value=0.94 Score=46.11 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=30.1
Q ss_pred CccccccCCCCEEEEEee----cCCC--CH--HHHHHHHHHHHHHHHHHh
Q psy9395 355 KSSLETKQIHGLFFAGQI----NGTT--GY--EEAASQGLLAGLNAALFS 396 (637)
Q Consensus 355 ~~tlesk~v~gLf~aGei----~G~~--Gy--~eA~a~G~~AG~naa~~~ 396 (637)
+..+++. +||||+|||. +|.. |. ..+..+|..||..+.+++
T Consensus 276 ~~~~~t~-vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 276 HSGAYAG-VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HCEECTT-SBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEC-CCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 3456665 9999999997 3332 42 257789999999998765
No 477
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=74.79 E-value=4.1 Score=42.41 Aligned_cols=34 Identities=29% Similarity=0.511 Sum_probs=30.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNID 40 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~ 40 (637)
..|.|||+|..|.+.|.++.+.|++|++++.+..
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4799999999999999999999999999997643
No 478
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=74.76 E-value=3.2 Score=43.37 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=30.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
..|.|||+|..|.+.|.+|.+.|++|++++.+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 369999999999999999999999999998764
No 479
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=74.75 E-value=2.2 Score=42.48 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=28.3
Q ss_pred ccEEEECcchHHHHHHHHHhhC--CCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARM--GQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~--G~~V~LiE~~ 38 (637)
..|.|||+|..|...|..+++. |.+|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 3699999999999999999887 6789999875
No 480
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=74.72 E-value=2.3 Score=42.33 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=29.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
..|+|||+|-+|..+|++|++.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 79999885
No 481
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=74.69 E-value=2.4 Score=42.39 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=29.0
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
-.++|+|+|-+|...|..|++.|. +|+++.|+
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 469999999999999999999996 89999885
No 482
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=74.57 E-value=1.4 Score=42.37 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=28.9
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.++|+|+|..|...|..|.+.|+ |+++|++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 469999999999999999999999 9999986
No 483
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=74.19 E-value=3.5 Score=43.67 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.8
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|.|||||..|.+.+.++.+.|++|.+++.+
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46999999999999999999999999999865
No 484
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=74.05 E-value=2.7 Score=43.77 Aligned_cols=32 Identities=22% Similarity=0.207 Sum_probs=29.4
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|+|+|.|..|..+|..|.+.|++|++.|++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999998864
No 485
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=73.92 E-value=2.2 Score=43.67 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=29.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC--cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~--~V~LiE~~ 38 (637)
..|.|||+|..|...|+.++..|. ++.|+|.+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 479999999999999999999887 89999974
No 486
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=73.32 E-value=2.5 Score=42.84 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=27.6
Q ss_pred EEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 9 VIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 9 ViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
|.|||+|..|...|+.++..|+ .|.|+|.+
T Consensus 2 I~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 8999999999999999998888 69999985
No 487
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=73.32 E-value=2 Score=42.89 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=28.7
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccCC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~ 39 (637)
.|.|||+|..|...|..+++.|++|++++ +.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 69999999999999999999999999998 63
No 488
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=72.97 E-value=2.9 Score=41.68 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=29.2
Q ss_pred ccEEEEC-cchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVG-GGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIG-gG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..++|+| +|.+|.++|..+++.|.+|++++++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 3689999 8999999999999999999999875
No 489
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=72.96 E-value=2.8 Score=45.44 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||.|..|..+|..|...|++|+++|++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999985
No 490
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=72.91 E-value=2.5 Score=41.38 Aligned_cols=30 Identities=17% Similarity=0.071 Sum_probs=27.4
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEcc
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSH 37 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~ 37 (637)
.|.|||+|..|...|..+++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999765
No 491
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=72.87 E-value=3.4 Score=42.39 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=29.0
Q ss_pred cEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 8 DViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
.|.|||+|..|.+.|..+++.|++|++.+++
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 5999999999999999999999999999875
No 492
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=72.76 E-value=3.4 Score=45.59 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=32.6
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCCCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTI 42 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~~~ 42 (637)
-.++|||+|..|...|-.|.+.|++|+++|++.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 369999999999999999999999999999986544
No 493
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=72.69 E-value=3.8 Score=40.04 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=29.7
Q ss_pred CCCC-CcccEEEECcc-h--HHHHHHHHHhhCCCcEEEEccC
Q psy9395 1 MLFK-SKFDVIVVGGG-H--AGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 1 M~~~-~~yDViVIGgG-~--AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
|+|+ +.--++|.||+ . .|.+.|..+++.|++|+++.++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 5544 22358888874 4 8999999999999999999875
No 494
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=72.69 E-value=2.4 Score=44.73 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=29.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC-cEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ-KTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~-~V~LiE~~ 38 (637)
-.|+|||+|.+|..+|..|...|. +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999998 89999875
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.63 E-value=3.8 Score=38.67 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=28.7
Q ss_pred cEEEECc-chHHHHHHHHHh-hCCCcEEEEccCC
Q psy9395 8 DVIVVGG-GHAGTEAALVSA-RMGQKTLLLSHNI 39 (637)
Q Consensus 8 DViVIGg-G~AGl~AA~~lA-~~G~~V~LiE~~~ 39 (637)
-|+|.|| |..|...|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4999995 999999999999 8999999999863
No 496
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=72.59 E-value=1.1 Score=43.58 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=29.5
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
..|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999873
No 497
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=72.58 E-value=3.6 Score=43.32 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=30.1
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccCCC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNID 40 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~~~ 40 (637)
..|.|+|||..|.+.+.++.+.|++|.+++ ...
T Consensus 25 ~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 25 RKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN 57 (403)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC
Confidence 579999999999999999999999999999 543
No 498
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=72.15 E-value=2.8 Score=44.68 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=28.3
Q ss_pred ccEEEECcchHHHHHHHHHhhCCC---cEEEEc
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQ---KTLLLS 36 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~---~V~LiE 36 (637)
..|+|+|+|.||..+|..|...|. +|+|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 469999999999999999999998 899998
No 499
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=71.60 E-value=1.9 Score=40.14 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=28.1
Q ss_pred CCCEEEEEeecCC-CCHH-HHHHHHHHHHHHHHHHhCCC
Q psy9395 363 IHGLFFAGQINGT-TGYE-EAASQGLLAGLNAALFSQDR 399 (637)
Q Consensus 363 v~gLf~aGei~G~-~Gy~-eA~a~G~~AG~naa~~~~~~ 399 (637)
+.+||||||-+-. .||. .|+-+|..|+..+...+.+.
T Consensus 117 ~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 117 EGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp BTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred CCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 6899999998443 4877 89889999998887655443
No 500
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=71.03 E-value=3.5 Score=43.77 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=29.7
Q ss_pred ccEEEECcchHHHHHHHHHhhCCCcEEEEccC
Q psy9395 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38 (637)
Q Consensus 7 yDViVIGgG~AGl~AA~~lA~~G~~V~LiE~~ 38 (637)
-.|+|||.|..|..+|..|...|.+|++.|++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999975
Done!