RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9395
(637 letters)
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 210 bits (535), Expect = 1e-64
Identities = 47/254 (18%), Positives = 87/254 (34%), Gaps = 33/254 (12%)
Query: 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEID 64
+ + V++VG G +G E A A+ G + LL+ ++D + P S L + D
Sbjct: 1 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYD 60
Query: 65 AMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEE 124
V A A+ +L L+LFQ
Sbjct: 61 PK----------------------DERVWAFHARAKYLLE---------GLRPLHLFQAT 89
Query: 125 VDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLA 184
L+++ N+++GV T G + V+L G+FL ++ +G AGR + S L
Sbjct: 90 ATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLL 149
Query: 185 KRLKELQLSHGRLKTGTP--PRIDKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLS 242
+ L L + P P + + + + + + G +
Sbjct: 150 EDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCVRE 209
Query: 243 CFITHTNEKTHNII 256
+E+ +
Sbjct: 210 GDYARMSEEGKRLA 223
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 79.5 bits (195), Expect = 5e-17
Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 21/197 (10%)
Query: 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLV 60
M+ ++ DV+VVG G AG AA ++ + + + G GG +
Sbjct: 28 MITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG--------GGAWLGGQL 79
Query: 61 KEIDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYL 120
+ + D+ G+ + + V+ I+ K R ++
Sbjct: 80 FSAMIVRKPAHLFLDEIGVAYDEQD--TYVVVKHAALFTSTIMSKLLARPNVK-----LF 132
Query: 121 FQEEVDDLIIKTNKILGVVTKIG-IKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFS 179
+DLI+K N++ GVVT + T + KI + +
Sbjct: 133 NAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG-----PF 187
Query: 180 TTSLAKRLKELQLSHGR 196
+ KRLK + +
Sbjct: 188 GATGVKRLKSIGMIDHV 204
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 59.3 bits (142), Expect = 2e-10
Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 12/163 (7%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDA 65
+DVIV+GGG +G AA+ +A G LLL +++ + + L +
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIV 61
Query: 66 MGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQE-- 123
S + + + L
Sbjct: 62 KHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK 121
Query: 124 ----------EVDDLIIKTNKILGVVTKIGIKFFSKTVILTTG 156
V+ + + + V+ + G + V++ G
Sbjct: 122 DLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVG 164
Score = 28.5 bits (62), Expect = 2.3
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 357 SLETKQIHGLFFAGQINGTTGYE------EAASQGLLAGLNAA 393
+ +K +GL+F G++ GY A G +AG A
Sbjct: 205 EMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAG 247
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 53.3 bits (127), Expect = 1e-08
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQ---MSCNPSIGGIGKSHLVKE 62
+ DV+++GGG G AA+ +A++G KT + G + C PS + SH+ E
Sbjct: 3 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE 62
Query: 63 IDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFY 111
+ I + K AV ++ + K + +
Sbjct: 63 AKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYV 111
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 51.1 bits (121), Expect = 9e-08
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 6/172 (3%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI--DTIGQMSCNPSIGGIGKSHLVKEI 63
+D I +GGG G + +A GQK L+ T + C P + + + I
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAI 61
Query: 64 DAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQE 123
G T + + L +S+ A + + +L K + +
Sbjct: 62 HMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTL 121
Query: 124 EVDDLIIKTNKIL----GVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYS 171
EV+ I + IL G + + G N K +I + Y
Sbjct: 122 EVNGETITADHILIATGGRPSHPREPANDNINLEAAGVKTNEKGYIVVDKYQ 173
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide
dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 50.8 bits (120), Expect = 1e-07
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDA 65
KFDVIV+G G G AA+ SA++G KT L+ G+ + + +G +D+
Sbjct: 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDS 62
Query: 66 MGGIM 70
Sbjct: 63 SYKFH 67
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 49.9 bits (118), Expect = 3e-07
Identities = 35/225 (15%), Positives = 72/225 (32%), Gaps = 27/225 (12%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEI 63
+ I++G G AG A A++G+ + + IG+ G ++L
Sbjct: 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNG-KKIGRKILMSGGGFCNFTNLEVTP 60
Query: 64 DAMGGI------MAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLN 117
A+A + ++ Q+ + I L+++ +
Sbjct: 61 AHYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECD 120
Query: 118 L----YLFQEEVDDLIIKTN--KILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYS 171
L + EV + N K+ V+ ++ K +I+ TG S
Sbjct: 121 KYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVATG------------GLS 168
Query: 172 AGRFGDFSTTSLAKRLKELQLSHGRLKTGTPPRIDKRTIDFSKME 216
G +T + ++ + + T +D + I ME
Sbjct: 169 MPGLG--ATPFGYQIAEQFGIPVIPPRAVTMGGVDTKVISSKTME 211
Score = 29.9 bits (66), Expect = 0.75
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 357 SLETKQIHGLFFAGQ---INGTTG---YEEAASQGLLAGLNAA 393
++E+ Q+ GL+F G+ + G G ++ A S L+ +
Sbjct: 209 TMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 251
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 47.7 bits (112), Expect = 2e-06
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL---SHNIDTIGQMSCNPSIGGIGKSHLVKE 62
++D I +GGG AG + MG + L++ + +C P + +
Sbjct: 42 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELML 101
Query: 63 IDAMGGIMAI 72
G
Sbjct: 102 ARTFSGQYWF 111
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 46.3 bits (108), Expect = 2e-06
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+DV++VG G AG AA+ SAR G +T L+
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLM 30
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 46.4 bits (109), Expect = 3e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQM 45
DV+++GGG AG AA+ +A++G T + G
Sbjct: 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 46.8 bits (110), Expect = 4e-06
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 17/66 (25%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDA 65
+FD +V+G G AG AAL ++ GQ LLS +SH V A
Sbjct: 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSK--------------VFPTRSHTVS---A 49
Query: 66 MGGIMA 71
GGI
Sbjct: 50 QGGITV 55
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 45.6 bits (107), Expect = 5e-06
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+ + +VVG G G AA+ +A++GQK ++
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIV 32
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 45.7 bits (107), Expect = 6e-06
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Query: 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLL-SHNIDTIGQMSCNPSIGGIGKSHLVKEI 63
+ +D +V+GGG G +A +A +G + ++ SH + + + + E
Sbjct: 2 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEF 61
Query: 64 DAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFY 111
+ + +R++ + A V A L K I
Sbjct: 62 MHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEII 109
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 45.8 bits (107), Expect = 7e-06
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNI--DTIGQMSCNPS 50
+D+IV+GGG G AA +AR K L+ + T + C P
Sbjct: 2 YDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPK 47
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 45.4 bits (106), Expect = 1e-05
Identities = 17/105 (16%), Positives = 29/105 (27%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAM 66
DV+VVG G AG AA+ + G K +L+ G + K
Sbjct: 17 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKIT 76
Query: 67 GGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFY 111
+ D I + + + + +
Sbjct: 77 DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLT 121
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 44.9 bits (105), Expect = 1e-05
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+DV+V+GGG G AA +A G K ++
Sbjct: 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIV 35
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 44.7 bits (104), Expect = 1e-05
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQM 45
FD+I++GGG G AA +A+ +K ++L T
Sbjct: 4 FDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGT 42
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 45.2 bits (105), Expect = 1e-05
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGG 53
++DVIV+G G + + + G+K L + N G S + +
Sbjct: 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRN-PYYGGESSSITPLE 52
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 45.0 bits (105), Expect = 2e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHN 38
V+VVG G AG A+L + + G +L+
Sbjct: 19 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKA 51
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 44.8 bits (104), Expect = 2e-05
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGK 56
+DVIV+G G + + + G+K L + D G + + ++ + +
Sbjct: 5 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ-DHYGGEAASVTLSQLYE 54
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 44.2 bits (103), Expect = 2e-05
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNP 49
+D++V+G G G EA +A + +K + + G
Sbjct: 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAA 46
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 44.4 bits (103), Expect = 3e-05
Identities = 53/389 (13%), Positives = 98/389 (25%), Gaps = 26/389 (6%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMGG 68
V V+G G +G AA G + G + S G+ + G
Sbjct: 4 VAVIGAGVSGLAAAYKLKIHGLNVTVFEAE-GKAGGKLRSVSQDGLIWDEGANTMTESEG 62
Query: 69 IMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDDL 128
+ D G++ + R +L I N L+ + + +
Sbjct: 63 DVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEP 122
Query: 129 IIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFSTTSLAKRLK 188
I+ NK L V+ ++ I + G S L
Sbjct: 123 ILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELW 182
Query: 189 ELQLSHGRLKTGTPPRI--DKRTIDFSKMEEQIGDFDPVPVFSVLGNINLHPKQLSCFIT 246
L+ G + G K + FS LG + + +
Sbjct: 183 NLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLR 242
Query: 247 HTNEKTHNIIRSEFKNSPIFSGKIESIGPRYCPSIEDKVYRFPKKKSHHIFLEPEGIVIN 306
+ NS + ++ + K + +++
Sbjct: 243 EDELRL---------NSRV--LELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMT 291
Query: 307 EYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCNLKSSLETKQIHGL 366
+ S + L+ I ++ +E + GL
Sbjct: 292 APLCDVKSMKIAKRGNPFLLNFIPE---VYGHNYDSVLDAI--------DKMEKN-LPGL 339
Query: 367 FFAGQINGTTGYEEAASQGLLAGLNAALF 395
F+AG G +A S G A +
Sbjct: 340 FYAGNHRGGLSVGKALSSGCNAADLVISY 368
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 44.0 bits (102), Expect = 3e-05
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI 54
D +V+GGG AG AA+ + + G T++LS + + + + GG+
Sbjct: 6 CDSLVIGGGLAGLRAAVATQQKGLSTIVLS--LIPVKRSHSAAAQGGM 51
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 43.5 bits (101), Expect = 3e-05
Identities = 9/30 (30%), Positives = 20/30 (66%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+ ++++GGG G AA+ + ++G T+L+
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLV 34
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 43.8 bits (102), Expect = 4e-05
Identities = 15/72 (20%), Positives = 26/72 (36%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEI 63
K DV+++G G AG AA+ + G K +LL G ++ ++
Sbjct: 21 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKL 80
Query: 64 DAMGGIMAIATD 75
+ D
Sbjct: 81 GIEDKKQIMIDD 92
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 42.8 bits (99), Expect = 7e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
K ++ +V+GGG G+ A A+ + T L
Sbjct: 2 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALF 33
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 42.3 bits (98), Expect = 7e-05
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
FD++V+G G G EAA +A + +K + +
Sbjct: 3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAV 32
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 41.8 bits (97), Expect = 7e-05
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSC 47
+ +VG G A AA+ +AR K LL +
Sbjct: 5 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGG 46
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 40.6 bits (94), Expect = 2e-04
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLL 35
++++G G AG AA+ +AR + +L+
Sbjct: 7 KLLILGSGPAGYTAAVYAARANLQPVLI 34
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 40.9 bits (94), Expect = 3e-04
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+ FDVIVVG G G A A+ G KTLL+
Sbjct: 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLV 32
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 40.4 bits (93), Expect = 3e-04
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTL 33
++++GGG AG EAALV+A +T
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPETT 28
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 40.9 bits (94), Expect = 4e-04
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43
DV+VVGGG +G AA + G ++L D +G
Sbjct: 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEAR-DRVG 35
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 39.9 bits (92), Expect = 5e-04
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 1 MLFKSKFDVIVVGGGHAGTEAA--LVSARMGQKTLLLSHNIDTIGQMSC 47
+ + DVI+VG G +G AA + R K ++ ++ G
Sbjct: 45 LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 93
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 38.3 bits (87), Expect = 0.001
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 8/77 (10%)
Query: 9 VIVVGGGHAGTEAALVSARMGQK---TLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDA 65
VIV+G H G EA + + + + G VK++++
Sbjct: 3 VIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGK-----VKDVNS 57
Query: 66 MGGIMAIATDKSGIQFR 82
+ + + G+
Sbjct: 58 VRYMTGEKMESRGVNVF 74
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 38.8 bits (89), Expect = 0.001
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 19/72 (26%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQ--KTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEI 63
+ D+ +VG G AG AA+ +A+ K L+S +SH V
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISK--------------VYPMRSHTVA-- 48
Query: 64 DAMGGIMAIATD 75
A GG A+A D
Sbjct: 49 -AEGGSAAVAQD 59
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 38.7 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI 54
DV+++G G AG AL A + ++LS + + S + GGI
Sbjct: 8 CDVLIIGSGAAGLSLALRLADQH-QVIVLSKG--PVTEGSTFYAQGGI 52
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 38.4 bits (88), Expect = 0.002
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+ +V+G G+ G AAL + G T ++
Sbjct: 6 DRVPALVIGSGYGGAVAALRLTQAGIPTQIV 36
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 38.2 bits (87), Expect = 0.002
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLL 35
+V VVGGG +G A G +LL
Sbjct: 2 NVAVVGGGISGLAVAHHLRSRGTDAVLL 29
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase
{White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 38.0 bits (87), Expect = 0.003
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
K+DV++VG G G A G K +
Sbjct: 4 KYDVVIVGSGPIGCTYARELVGAGYKVAMF 33
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 37.2 bits (84), Expect = 0.004
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGG 53
VIVVG G +G AA + G LL+ D IG + G
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG 47
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 36.8 bits (84), Expect = 0.005
Identities = 16/120 (13%), Positives = 35/120 (29%), Gaps = 20/120 (16%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL--SHNIDTIGQMSCNPSIGGIGKSHLVKEI 63
K V ++G G +G + + G ++L +G+ G+ + +V +
Sbjct: 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGR-----IRAGVLEQGMVDLL 56
Query: 64 DAMG---GIMAIATDKSGIQFR----------ILNSSKGAAVRATRAQVDRILYKQAIRF 110
G + G++ S + +V R L +
Sbjct: 57 REAGVDRRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREAC 116
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 36.9 bits (84), Expect = 0.005
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 1 MLFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLS 36
++ S+ V+V+G G G +AL+ AR G +L+
Sbjct: 1 LMMHSQKRVVVLGSGVIGLSSALILARKGYSVHILA 36
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 35.9 bits (81), Expect = 0.007
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQM 45
+ ++G G A A AR+G + + + +G +
Sbjct: 7 IALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL 43
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 35.9 bits (81), Expect = 0.007
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLL 34
V++VG G G E A ++ + T++
Sbjct: 3 VVIVGNGPGGFELAKQLSQTYEVTVI 28
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 36.8 bits (83), Expect = 0.008
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIG 43
K VI++G G +G AA G LL D +G
Sbjct: 3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR-DRVG 41
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 36.5 bits (83), Expect = 0.008
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLL 35
+V+G G+ +AL G +TL+L
Sbjct: 4 PAVVIGTGYGAAVSALRLGEAGVQTLML 31
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 36.5 bits (83), Expect = 0.008
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 6 KFDVIVVGGGHAGTEAALVSARM----GQKTLLLS 36
+ D++++GGG +G AA +A G K L+
Sbjct: 21 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVE 55
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 36.3 bits (82), Expect = 0.009
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSH 58
V++VG G AG AA V A G + +L + + G G
Sbjct: 32 HVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS-ERPGGRVRTYRNEEAGWYA 81
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 35.9 bits (81), Expect = 0.012
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLL 35
D+++ G G G AL + G + L
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTL 30
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 35.6 bits (81), Expect = 0.015
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Query: 6 KFDVIVVGGGHAGTEAALVSARM------GQKTLLL 35
+ DV++VG G AG AA ++ + L+
Sbjct: 32 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLV 67
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 35.5 bits (80), Expect = 0.017
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLL 35
++++G G GT A G + +
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITV 30
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 34.3 bits (77), Expect = 0.025
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
K V+V+G G A + G + L+
Sbjct: 3 KAPVVVLGAGLASVSFVAELRQAGYQGLIT 32
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 34.0 bits (76), Expect = 0.026
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKT 32
+V++VG G AG E A G +
Sbjct: 5 NVVIVGTGLAGVEVAFGLRASGWEG 29
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 33.9 bits (76), Expect = 0.039
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 18/159 (11%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEIDAMG 67
+ VVGG +G AAL+ G + + + + +L
Sbjct: 6 RIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYL-------- 57
Query: 68 GIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEEVDD 127
+ G++ ++ + +R+ A + E
Sbjct: 58 -------LEQGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGP 110
Query: 128 LIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIG 166
T+K + + + + + GT IG
Sbjct: 111 ERYHTSK---CLVGLSQDSETVQMRFSDGTKAEANWVIG 146
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine
dehydrogenase, middle domain {Methylophilus
methylotrophus, w3a1 [TaxId: 17]}
Length = 233
Score = 34.0 bits (76), Expect = 0.040
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCN 48
K+K V++VG G +G+EAA V G L G ++
Sbjct: 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQV 91
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide
transhydrogenase dI component {Rhodospirillum rubrum
[TaxId: 1085]}
Length = 183
Score = 33.4 bits (76), Expect = 0.040
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQM 45
V+V G G AG +A + R+G + T Q+
Sbjct: 32 VLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 68
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete
chrysosporium) [TaxId: 5306]}
Length = 360
Score = 33.9 bits (76), Expect = 0.058
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+D I+VG G G AA + G+K LLL
Sbjct: 3 YDYIIVGAGPGGIIAADRLSEAGKKVLLL 31
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase,
domain 3 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 153
Score = 32.4 bits (73), Expect = 0.063
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 2 LFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSH 37
L + VIV+G G + A + R G + + L
Sbjct: 41 LPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVF 76
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 32.5 bits (72), Expect = 0.081
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 9 VIVVGGGHAGTEAALVSARMG 29
V+VVGGG G AA
Sbjct: 5 VVVVGGGTGGATAAKYIKLAD 25
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase
FprA {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 32.7 bits (73), Expect = 0.098
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGG 53
+ + +VG G + AA + T L +D + P+ G
Sbjct: 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEM---LPTPWG 46
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 32.5 bits (73), Expect = 0.13
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 7 FDVIVVGGGHAG-TEAALVSARMGQKTLLL 35
D I+ GGG G T AA ++ L++
Sbjct: 18 VDYIIAGGGLTGLTTAARLTENPNISVLVI 47
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 31.8 bits (71), Expect = 0.17
Identities = 12/77 (15%), Positives = 22/77 (28%), Gaps = 11/77 (14%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI---GKSHLVKEIDA 65
+ VVG G AG A + + ++D + G+ G + E+
Sbjct: 4 ICVVGSGPAGFYTAQHLLKHHSR-----AHVDIYEK---QLVPFGLVRFGVAPDHPEVKN 55
Query: 66 MGGIMAIATDKSGIQFR 82
+ F
Sbjct: 56 VINTFTQTARSDRCAFY 72
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 32.4 bits (72), Expect = 0.18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQK 31
+S DV++VG G AG AA V + ++
Sbjct: 5 ESYCDVLIVGAGPAGLMAARVLSEYVRQ 32
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase
{Nitrosomonas europaea [TaxId: 915]}
Length = 158
Score = 31.2 bits (70), Expect = 0.21
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 2/125 (1%)
Query: 5 SKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKEID 64
SKFD + G +A + L + + + + + S +G
Sbjct: 4 SKFDKWLEGDKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPYETKNPAA 63
Query: 65 AMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLYLFQEE 124
+ D++ + L + + + +QA+ QLN ++E
Sbjct: 64 GRMDVTGNEADRNVFKVPTLRNIELTYPYFHDGGAATL--EQAVETMGRIQLNREFNKDE 121
Query: 125 VDDLI 129
V ++
Sbjct: 122 VSKIV 126
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 31.2 bits (69), Expect = 0.27
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 5 SKFDVIVVGGGHAGTEAA 22
S +++GGG A AA
Sbjct: 3 SHVPFLLIGGGTAAFAAA 20
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922,
C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Length = 278
Score = 31.5 bits (70), Expect = 0.28
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)
Query: 294 HHIFLEPEGIVINEYYPNGISTSLPFEAQIELVQSIDGMKNANIIRPGYAIEYDYFNPCN 353
+ V+ E + T P E + +++ +K + +A E +
Sbjct: 132 ADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKEN---DCVL 188
Query: 354 LKSSLETKQIHGLFFAGQINGTTGYEEAASQGLLAGLNAALFSQDRDPWIPGRDQAYLGV 413
+ S T G I G TG + S +L G+ A +Q P + + + V
Sbjct: 189 VLKSATTIVTDGEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPL----EASTVSV 244
Query: 414 LV 415
+
Sbjct: 245 YL 246
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 30.9 bits (69), Expect = 0.41
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 7 FDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGI 54
+D I+VG G G A ++ +K L++ + IG + GI
Sbjct: 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKR-NHIGGNAYTEDCEGI 48
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.1 bits (67), Expect = 0.44
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSC 47
+ VVG G AG A+ +A G + L + + GQ +
Sbjct: 46 LAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNI 84
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 31.0 bits (69), Expect = 0.46
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 7 FDVIVVGGGHAG-TEAALVSARMGQKTLLL 35
+D I+ GGG G T AA ++ K L++
Sbjct: 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVI 54
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium
lapideum [TaxId: 32060]}
Length = 168
Score = 29.5 bits (66), Expect = 0.65
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 8 DVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQM 45
V+++GGG GTEAA ++ +G + + N++ + +
Sbjct: 34 KVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYL 71
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 30.2 bits (67), Expect = 0.70
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQ--KTLLL 35
+ +D ++VGGG +G ++A + + K L+L
Sbjct: 24 EGSYDYVIVGGGTSG---CPLAATLSEKYKVLVL 54
>d1eb7a2 a.3.1.5 (A:165-323) Di-heme cytochrome c peroxidase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 159
Score = 29.3 bits (65), Expect = 0.88
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 105 KQAIRFYLENQLNLYLFQEEVDDLI 129
K A+ QL L ++V++++
Sbjct: 105 KDAVAIMGNAQLGKQLAPDDVENIV 129
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide
synthetase PurK (AIRC), N-domain {Escherichia coli
[TaxId: 562]}
Length = 78
Score = 27.5 bits (61), Expect = 1.1
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLLS 36
V V+G G G +G +
Sbjct: 4 VCVLGNGQLGRMLRQAGEPLGIAVWPVG 31
>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate
aminotransferase {Thermus thermophilus [TaxId: 274]}
Length = 348
Score = 29.2 bits (64), Expect = 1.5
Identities = 8/58 (13%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 2 LFKSKFDVIVV-GGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSH 58
F+++ +V+++ G G EA + + + +L+ + G+
Sbjct: 45 AFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVER 102
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase
{Pseudomonas nautica [TaxId: 2743]}
Length = 160
Score = 27.8 bits (61), Expect = 2.3
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 105 KQAIRFYLENQLNLYLFQEEVDDLI 129
++A+ QL L +EV ++
Sbjct: 103 EEAVAVMGTAQLGTELNNDEVKSIV 127
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 28.3 bits (62), Expect = 2.9
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 6 KFDVIVVGGGHAGTEAALVSARMGQKTLLL 35
+ DV+VVG G +G A +G+ ++
Sbjct: 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVI 36
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide
transformylase PurT, N-domain {Escherichia coli [TaxId:
562]}
Length = 111
Score = 27.2 bits (60), Expect = 3.0
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 2 LFKSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCN 48
L + V+++G G G E A+ R+G + + + D +
Sbjct: 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAH 53
>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 147
Score = 27.4 bits (60), Expect = 3.6
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 418 LITKGIQEPYRMFTSRAEYRLNLREDNADLRLTEIGWKLGCVSYKQWKIFEKKREIITKE 477
L K +E + Y + + +TE K ++ W ++ II
Sbjct: 53 LFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENV-KGDTKKFEIWYNAREEVYIIQAP 111
Query: 478 LQRLKDTWIN 487
+K W+N
Sbjct: 112 TPEIKAAWVN 121
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 27.9 bits (61), Expect = 3.9
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 9 VIVVGGGHAGTEAALVSARMGQKTLLL 35
V+V+G G G AL L
Sbjct: 3 VVVIGAGVIGLSTALCIHERYHSVLQP 29
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 27.5 bits (60), Expect = 6.0
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 18/188 (9%)
Query: 4 KSKFDVIVVGGGHAGTEAALVSARMGQKTLLLSHNIDTIGQMSCNPSIGGIGKSHLVKE- 62
KSK +++VG G +G A G + ++ IGG E
Sbjct: 1 KSK-KILIVGAGFSGAVIGRQLAEKGHQVHIIDQ----------RDHIGGNSYDARDSET 49
Query: 63 ---IDAMGGIMAIATDKSGIQFRILNSSKGAAVRATRAQVDRILYKQAIRFYLENQLNLY 119
+ G + +++ + ++ V +A V+ ++ I + NQ
Sbjct: 50 NVMVHVYGPHIFHTDNETVWNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSK 109
Query: 120 LFQEEVDDLIIKTNKILGVVTKIGIKFFSKTVILTTGTFLNGKIHIGLKSYSAGRFGDFS 179
+ +I + + F + + G L G G
Sbjct: 110 TCSPDEARALIAEKGDSTIAD---PQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSEL 166
Query: 180 TTSLAKRL 187
S+ KRL
Sbjct: 167 PASILKRL 174
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.137 0.394
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,367,212
Number of extensions: 116253
Number of successful extensions: 428
Number of sequences better than 10.0: 1
Number of HSP's gapped: 424
Number of HSP's successfully gapped: 85
Length of query: 637
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 546
Effective length of database: 1,158,166
Effective search space: 632358636
Effective search space used: 632358636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)