BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9398
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SUN8|RS9_JANMA 30S ribosomal protein S9 OS=Janthinobacterium sp. (strain
Marseille) GN=rpsI PE=3 SV=1
Length = 130
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
NY YGTGRRKSA+ARVFIK GSG++ +N PA++YFSR+TGLMVI QPL+LT + +TFDI
Sbjct: 4 NYNYGTGRRKSAVARVFIKSGSGQIVVNGKPANEYFSRETGLMVIRQPLELTNNVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
+NV GGGESGQ GAVRHGITRA
Sbjct: 64 MVNVNGGGESGQAGAVRHGITRAL 87
>sp|A4G1T3|RS9_HERAR 30S ribosomal protein S9 OS=Herminiimonas arsenicoxydans GN=rpsI
PE=3 SV=1
Length = 130
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
NY YGTGRRKSA+ARVFIK GSG++ +N PA++YFSR+TGLMVI QPL+LT + +TFDI
Sbjct: 4 NYNYGTGRRKSAVARVFIKSGSGQIVVNGKPANEYFSRETGLMVIRQPLELTNNVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
+NV GGGESGQ GAVRHGITRA
Sbjct: 64 MVNVNGGGESGQAGAVRHGITRAL 87
>sp|Q0AHZ9|RS9_NITEC 30S ribosomal protein S9 OS=Nitrosomonas eutropha (strain C91)
GN=rpsI PE=3 SV=1
Length = 130
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 70/86 (81%)
Query: 66 VVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTF 125
+ Y YGTGRRKSA+ARVFIK G+G +T+N PAD+YFSR+TG M+I QPL+LT ++
Sbjct: 2 AIQYNYGTGRRKSAVARVFIKSGTGVITVNHKPADEYFSRETGRMIIRQPLELTGNSTNL 61
Query: 126 DIKINVRGGGESGQYGAVRHGITRAF 151
DI +N+RGGGESGQ GAVRHGITRA
Sbjct: 62 DIMVNIRGGGESGQAGAVRHGITRAL 87
>sp|A3NDG7|RS9_BURP6 30S ribosomal protein S9 OS=Burkholderia pseudomallei (strain 668)
GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|Q3JNR2|RS9_BURP1 30S ribosomal protein S9 OS=Burkholderia pseudomallei (strain
1710b) GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|A3NZ79|RS9_BURP0 30S ribosomal protein S9 OS=Burkholderia pseudomallei (strain
1106a) GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|A1V052|RS9_BURMS 30S ribosomal protein S9 OS=Burkholderia mallei (strain SAVP1)
GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|Q62HB9|RS9_BURMA 30S ribosomal protein S9 OS=Burkholderia mallei (strain ATCC 23344)
GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|A2S582|RS9_BURM9 30S ribosomal protein S9 OS=Burkholderia mallei (strain NCTC 10229)
GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|A3MP60|RS9_BURM7 30S ribosomal protein S9 OS=Burkholderia mallei (strain NCTC 10247)
GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|Q63QW4|RS9_BURPS 30S ribosomal protein S9 OS=Burkholderia pseudomallei (strain
K96243) GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPISDYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|Q82UK1|RS9_NITEU 30S ribosomal protein S9 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rpsI PE=3 SV=1
Length = 130
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 69/86 (80%)
Query: 66 VVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTF 125
+ Y YGTGRRKSA+ARVFIK G+G +T+N PAD+YFSR+TG M+I QPL+LT +T
Sbjct: 2 AIQYNYGTGRRKSAVARVFIKPGTGVITVNHKPADEYFSRETGRMIIRQPLELTGNTSNL 61
Query: 126 DIKINVRGGGESGQYGAVRHGITRAF 151
DI +N+ GGGESGQ GAVRHGITRA
Sbjct: 62 DIMVNIHGGGESGQAGAVRHGITRAL 87
>sp|Q3SF20|RS9_THIDA 30S ribosomal protein S9 OS=Thiobacillus denitrificans (strain ATCC
25259) GN=rpsI PE=3 SV=1
Length = 130
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 68/87 (78%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
NY YGTGRRKS++ARVFIK GSGK+ +N P D+YFSR+TG M++ QPL LT + FDI
Sbjct: 4 NYNYGTGRRKSSVARVFIKAGSGKIVVNDKPVDEYFSRETGRMIVRQPLVLTDNLNRFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAFNQL 154
+NV GGGESGQ GAVRHGITRA L
Sbjct: 64 MVNVAGGGESGQAGAVRHGITRALIDL 90
>sp|Q7W3Z2|RS9_BORPA 30S ribosomal protein S9 OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rpsI PE=3 SV=1
Length = 130
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 71/84 (84%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRK+++ARVFIK GSGK+ +N P D++F+R+TG M++ QPL+LT H ++FDI
Sbjct: 4 NWNYGTGRRKTSVARVFIKKGSGKIVVNGKPVDEFFARETGRMIVCQPLELTGHLESFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVHGGGETGQAGAVRHGITRAL 87
>sp|Q475T2|RS9_CUPPJ 30S ribosomal protein S9 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=rpsI PE=3 SV=1
Length = 130
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 69/84 (82%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P +YF+R+T LM++ QPL+LT+H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIVVNGKPIKEYFARETSLMIVRQPLELTEHAETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q2SZ68|RS9_BURTA 30S ribosomal protein S9 OS=Burkholderia thailandensis (strain E264
/ ATCC 700388 / DSM 13276 / CIP 106301) GN=rpsI PE=3
SV=1
Length = 130
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q7VUV9|RS9_BORPE 30S ribosomal protein S9 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=rpsI PE=3 SV=1
Length = 130
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 71/84 (84%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRK+++ARVFIK GSGK+ +N P D++F+R+TG M++ QPL+LT H ++FDI
Sbjct: 4 NWNYGTGRRKTSVARVFIKKGSGKIVVNGKPVDEFFARETGRMIVHQPLELTGHLESFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVHGGGETGQAGAVRHGITRAL 87
>sp|Q7WFC4|RS9_BORBR 30S ribosomal protein S9 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rpsI PE=3 SV=1
Length = 130
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 71/84 (84%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRK+++ARVFIK GSGK+ +N P D++F+R+TG M++ QPL+LT H ++FDI
Sbjct: 4 NWNYGTGRRKTSVARVFIKKGSGKIVVNGKPVDEFFARETGRMIVRQPLELTGHLESFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVHGGGETGQAGAVRHGITRAL 87
>sp|Q39JJ9|RS9_BURS3 30S ribosomal protein S9 OS=Burkholderia sp. (strain 383) GN=rpsI
PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|B4EET5|RS9_BURCJ 30S ribosomal protein S9 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|A0K4K6|RS9_BURCH 30S ribosomal protein S9 OS=Burkholderia cenocepacia (strain
HI2424) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|B1JVU5|RS9_BURCC 30S ribosomal protein S9 OS=Burkholderia cenocepacia (strain MC0-3)
GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|Q1BZ44|RS9_BURCA 30S ribosomal protein S9 OS=Burkholderia cenocepacia (strain AU
1054) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|A4JBK5|RS9_BURVG 30S ribosomal protein S9 OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVNGGGETGQAGAVRHGITRAL 87
>sp|A9I240|RS9_BORPD 30S ribosomal protein S9 OS=Bordetella petrii (strain ATCC BAA-461
/ DSM 12804 / CCUG 43448) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 71/84 (84%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRK+++ARVFIK GSGK+ +N P D++F+R+TG M++ QPL+LT H ++FDI
Sbjct: 4 NWNYGTGRRKTSVARVFIKKGSGKIIVNGKPVDEFFARETGRMIVRQPLELTGHLESFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVHGGGETGQAGAVRHGITRAL 87
>sp|A9AH80|RS9_BURM1 30S ribosomal protein S9 OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YF+R+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFARETSLMIVRQPLELTNHAQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|B2AH58|RS9_CUPTR 30S ribosomal protein S9 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P +YF+R+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIVVNGKPIKEYFARETSLMIVRQPLELTAHAETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q0BI90|RS9_BURCM 30S ribosomal protein S9 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|B1YTD2|RS9_BURA4 30S ribosomal protein S9 OS=Burkholderia ambifaria (strain MC40-6)
GN=rpsI PE=3 SV=1
Length = 130
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIIVNGKPIADYFSRETSLMIVRQPLELTNHGQTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q0KED8|RS9_CUPNH 30S ribosomal protein S9 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=rpsI PE=3 SV=1
Length = 130
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P +YF+R+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIIVNGKPIKEYFARETSLMIVRQPLELTAHAETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q1LRC9|RS9_RALME 30S ribosomal protein S9 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=rpsI PE=3 SV=1
Length = 130
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 68/84 (80%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P +YF+R+T LM++ QPL+LT H +TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIIVNGKPIKEYFARETSLMIVRQPLELTAHAETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|B2JGV1|RS9_BURP8 30S ribosomal protein S9 OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=rpsI PE=3 SV=1
Length = 130
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPIADYFSRETSLMIVRQPLELTNHGTTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVSGGGETGQAGAVRHGITRAL 87
>sp|Q13UB3|RS9_BURXL 30S ribosomal protein S9 OS=Burkholderia xenovorans (strain LB400)
GN=rpsI PE=3 SV=1
Length = 130
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPIADYFSRETSLMIVRQPLELTNHGVTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|B2SYK9|RS9_BURPP 30S ribosomal protein S9 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rpsI PE=3 SV=1
Length = 130
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YFSR+T LM++ QPL+LT H TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKAGKGDIVVNGKPIADYFSRETSLMIVRQPLELTNHGVTFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVTGGGETGQAGAVRHGITRAL 87
>sp|Q2KV03|RS9_BORA1 30S ribosomal protein S9 OS=Bordetella avium (strain 197N) GN=rpsI
PE=3 SV=1
Length = 130
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 70/84 (83%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRK+++ARVFIK G+GK+ +N P D++F+R+TG MV+ QPL LT H ++FDI
Sbjct: 4 NWNYGTGRRKTSVARVFIKKGTGKIVVNGKPVDEFFARETGRMVVRQPLALTGHLESFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVIGGGETGQAGAVRHGITRAL 87
>sp|Q2YBK3|RS9_NITMU 30S ribosomal protein S9 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsI PE=3 SV=1
Length = 130
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 67/83 (80%)
Query: 69 YKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIK 128
Y YGTGRRKSA+ARVFIK GSG +T+N P D++FSR+TG MV+ QPL+LT + FDI
Sbjct: 5 YSYGTGRRKSAVARVFIKPGSGVITVNNKPVDEFFSRETGRMVVRQPLELTGNLDRFDIL 64
Query: 129 INVRGGGESGQYGAVRHGITRAF 151
+N+ GGGESGQ GAVRHGITRA
Sbjct: 65 VNIHGGGESGQAGAVRHGITRAL 87
>sp|A2SKM0|RS9_METPP 30S ribosomal protein S9 OS=Methylibium petroleiphilum (strain PM1)
GN=rpsI PE=3 SV=1
Length = 130
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 69/84 (82%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKS++ARVFIK GSG++T+N P ++YF R+T +M++ QPL LT + + FDI
Sbjct: 4 NWNYGTGRRKSSVARVFIKKGSGQITVNGKPVEQYFGRQTSIMIVKQPLFLTNNVEAFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGESGQ GAVRHG+TRA
Sbjct: 64 KVNVHGGGESGQAGAVRHGVTRAL 87
>sp|B2UFK2|RS9_RALPJ 30S ribosomal protein S9 OS=Ralstonia pickettii (strain 12J)
GN=rpsI PE=3 SV=1
Length = 130
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 67/84 (79%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N ++YF+R+T LM++ QPL+LT H TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIIVNGKAINEYFARETSLMIVRQPLELTNHAATFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVVGGGETGQAGAVRHGITRAL 87
>sp|Q5P7T8|RS9_AROAE 30S ribosomal protein S9 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsI PE=3 SV=1
Length = 130
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 68/85 (80%)
Query: 67 VNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFD 126
V+Y YGTGRRK+A+ARVFIK GSG + +N P D++FSR+TG M++ QPL LT++ FD
Sbjct: 3 VSYNYGTGRRKTAVARVFIKPGSGNIVVNGKPVDEFFSRETGRMIVRQPLVLTENDSRFD 62
Query: 127 IKINVRGGGESGQYGAVRHGITRAF 151
I +NV GGGESGQ GAVRHGITRA
Sbjct: 63 IMVNVTGGGESGQAGAVRHGITRAL 87
>sp|Q8Y245|RS9_RALSO 30S ribosomal protein S9 OS=Ralstonia solanacearum (strain GMI1000)
GN=rpsI PE=3 SV=1
Length = 130
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 66/84 (78%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N+ YGTGRRKSA+ARVFIK G G + +N P YF+R+T LM++ QPL+LT H TFDI
Sbjct: 4 NWNYGTGRRKSAVARVFIKSGKGDIIVNGKPVADYFARETSLMMVRQPLELTNHGATFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGE+GQ GAVRHGITRA
Sbjct: 64 KVNVVGGGETGQAGAVRHGITRAL 87
>sp|Q7NRT4|RS9_CHRVO 30S ribosomal protein S9 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=rpsI PE=3 SV=1
Length = 130
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 70/83 (84%)
Query: 69 YKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIK 128
Y YGTGRRKS++ARVF++ GSG++ +N P D+YF+R+TG MVI QPL LT++ ++FDIK
Sbjct: 5 YYYGTGRRKSSVARVFMQKGSGQIIVNGKPVDEYFARETGRMVIRQPLALTENLESFDIK 64
Query: 129 INVRGGGESGQYGAVRHGITRAF 151
+NV GGGE+GQ GA+RHGITRA
Sbjct: 65 VNVVGGGETGQAGAIRHGITRAL 87
>sp|A1K970|RS9_AZOSB 30S ribosomal protein S9 OS=Azoarcus sp. (strain BH72) GN=rpsI PE=3
SV=1
Length = 130
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 66 VVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTF 125
V Y YGTGRRK+A+ARVFIK GSG + +N P D++FSR+TG M++ QPL LT + F
Sbjct: 2 AVTYNYGTGRRKTAVARVFIKPGSGNIVVNGKPVDEFFSRETGRMIVRQPLVLTGNEGRF 61
Query: 126 DIKINVRGGGESGQYGAVRHGITRAF 151
DI +NV GGGESGQ GAVRHGITRA
Sbjct: 62 DIMVNVTGGGESGQAGAVRHGITRAL 87
>sp|A1W3P8|RS9_ACISJ 30S ribosomal protein S9 OS=Acidovorax sp. (strain JS42) GN=rpsI
PE=3 SV=1
Length = 130
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
+ GTGRRKS++ARVF+K GSGK+T+N +YF R+T +M+ QPL LT H +TFDI
Sbjct: 4 EWNNGTGRRKSSVARVFLKKGSGKITVNGKDIQQYFGRETSIMIAKQPLALTNHVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
+INV GGGESGQ GA RHGITRA
Sbjct: 64 QINVHGGGESGQAGAARHGITRAL 87
>sp|B9MD53|RS9_ACIET 30S ribosomal protein S9 OS=Acidovorax ebreus (strain TPSY) GN=rpsI
PE=3 SV=1
Length = 130
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
+ GTGRRKS++ARVF+K GSGK+T+N +YF R+T +M+ QPL LT H +TFDI
Sbjct: 4 EWNNGTGRRKSSVARVFLKKGSGKITVNGKDIQQYFGRETSIMIAKQPLALTNHVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
+INV GGGESGQ GA RHGITRA
Sbjct: 64 QINVHGGGESGQAGAARHGITRAL 87
>sp|A1TUF5|RS9_ACIAC 30S ribosomal protein S9 OS=Acidovorax citrulli (strain AAC00-1)
GN=rpsI PE=3 SV=1
Length = 130
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 64/84 (76%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
+ GTGRRKS++ARVF+K GSGK+T+N +YF R+T +M+ QPL LT H +TFDI
Sbjct: 4 EWNNGTGRRKSSVARVFLKKGSGKITVNGKDIQQYFGRETSIMIAKQPLVLTNHVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
++NV GGGESGQ GA RHGITRA
Sbjct: 64 QVNVHGGGESGQAGATRHGITRAL 87
>sp|A1WL75|RS9_VEREI 30S ribosomal protein S9 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rpsI PE=3 SV=1
Length = 130
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
+ GTGRRKS++ARVF+K GSGK+TIN YF R+T +M+ QPL LT H +TFDI
Sbjct: 4 QWNNGTGRRKSSVARVFLKKGSGKITINGKDIQSYFGRETSIMIARQPLALTNHVETFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
+INV GGGESGQ GA RHGITRA
Sbjct: 64 RINVYGGGESGQAGAARHGITRAL 87
>sp|B8CIP3|RS9_SHEPW 30S ribosomal protein S9 OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rpsI PE=3 SV=1
Length = 130
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 66/84 (78%)
Query: 71 YGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKIN 130
YGTGRRK++ ARVF K+G+G +T+N++P D+YF R+T MV+ QPL+L + T+ DI +
Sbjct: 7 YGTGRRKTSTARVFAKVGTGNITVNKLPLDEYFGRETSRMVVRQPLELVEMTEKLDINVT 66
Query: 131 VRGGGESGQYGAVRHGITRAFNQL 154
V+GGG +GQ GA+RHGITRA +L
Sbjct: 67 VKGGGNTGQAGAIRHGITRALMEL 90
>sp|B1Y3K6|RS9_LEPCP 30S ribosomal protein S9 OS=Leptothrix cholodnii (strain ATCC 51168
/ LMG 8142 / SP-6) GN=rpsI PE=3 SV=1
Length = 130
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 65/84 (77%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
+ YGTGRRKS++ARVFIK G+GK+ +N ++YF R+T +M+ QPL LT + + FDI
Sbjct: 4 EWNYGTGRRKSSVARVFIKKGTGKIIVNGKTVEEYFGRQTSIMICKQPLFLTNNAEAFDI 63
Query: 128 KINVRGGGESGQYGAVRHGITRAF 151
K+NV GGGESGQ GAVRHG+TRA
Sbjct: 64 KVNVHGGGESGQAGAVRHGVTRAL 87
>sp|A1KWD5|RS9_NEIMF 30S ribosomal protein S9 OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=rpsI PE=3
SV=1
Length = 130
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 68/83 (81%)
Query: 69 YKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIK 128
Y YGTGRRKS++ARVF+ G+G++ +N P D++F+R+T MV+ QPL LT++ ++FDIK
Sbjct: 5 YYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAESFDIK 64
Query: 129 INVRGGGESGQYGAVRHGITRAF 151
+NV GGGE+GQ GA+RHGITRA
Sbjct: 65 VNVVGGGETGQSGAIRHGITRAL 87
>sp|P66642|RS9_NEIMB 30S ribosomal protein S9 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rpsI PE=3 SV=1
Length = 130
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 68/83 (81%)
Query: 69 YKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIK 128
Y YGTGRRKS++ARVF+ G+G++ +N P D++F+R+T MV+ QPL LT++ ++FDIK
Sbjct: 5 YYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAESFDIK 64
Query: 129 INVRGGGESGQYGAVRHGITRAF 151
+NV GGGE+GQ GA+RHGITRA
Sbjct: 65 VNVVGGGETGQSGAIRHGITRAL 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,782,395
Number of Sequences: 539616
Number of extensions: 2279482
Number of successful extensions: 6325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 4226
Number of HSP's gapped (non-prelim): 1954
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)