Your job contains 1 sequence.
>psy9398
MWFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTGYPGGIRKINFLKMQEDFPGRVL
QKAVKVVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTK
HTKTFDIKINVRGGGESGQYGAVRHGITRAFNQL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9398
(154 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|GSU_2875 - symbol:GSU_2875 "ribosomal protein S9... 258 3.4e-22 1
TIGR_CMR|SO_3939 - symbol:SO_3939 "ribosomal protein S9" ... 254 9.0e-22 1
UNIPROTKB|P0A7X3 - symbol:rpsI "30S ribosomal subunit pro... 244 1.0e-20 1
TIGR_CMR|CPS_4442 - symbol:CPS_4442 "ribosomal protein S9... 244 1.0e-20 1
UNIPROTKB|Q9KUF0 - symbol:rpsI "30S ribosomal protein S9"... 243 1.3e-20 1
TIGR_CMR|VC_0571 - symbol:VC_0571 "ribosomal protein S9" ... 243 1.3e-20 1
TIGR_CMR|CBU_1748 - symbol:CBU_1748 "ribosomal protein S9... 233 1.5e-19 1
TIGR_CMR|CHY_2273 - symbol:CHY_2273 "ribosomal protein S9... 232 1.9e-19 1
TIGR_CMR|SPO_1692 - symbol:SPO_1692 "ribosomal protein S9... 194 2.0e-15 1
TAIR|locus:2101373 - symbol:AT3G49080 species:3702 "Arabi... 192 1.7e-14 1
TIGR_CMR|BA_0144 - symbol:BA_0144 "ribosomal protein S9" ... 185 1.8e-14 1
TIGR_CMR|ECH_1018 - symbol:ECH_1018 "ribosomal protein S9... 185 1.8e-14 1
TIGR_CMR|APH_1107 - symbol:APH_1107 "ribosomal protein S9... 183 3.0e-14 1
TIGR_CMR|CJE_1652 - symbol:CJE_1652 "ribosomal protein S9... 173 3.4e-13 1
TIGR_CMR|CPS_4443 - symbol:CPS_4443 "ribosomal protein L1... 155 2.8e-11 1
UNIPROTKB|P66639 - symbol:rpsI "30S ribosomal protein S9"... 150 9.4e-11 1
TIGR_CMR|NSE_0839 - symbol:NSE_0839 "ribosomal protein S9... 150 9.4e-11 1
TIGR_CMR|DET_0506 - symbol:DET_0506 "ribosomal protein S9... 149 1.2e-10 1
TIGR_CMR|SO_3940 - symbol:SO_3940 "ribosomal protein L13"... 149 1.2e-10 1
UNIPROTKB|Q9KUF1 - symbol:rplM "50S ribosomal protein L13... 147 2.0e-10 1
TIGR_CMR|VC_0570 - symbol:VC_0570 "ribosomal protein L13"... 147 2.0e-10 1
TAIR|locus:2037222 - symbol:RPS9 "ribosomal protein S9" s... 142 6.6e-10 1
UNIPROTKB|P0AA10 - symbol:rplM species:83333 "Escherichia... 139 1.4e-09 1
TIGR_CMR|CHY_2274 - symbol:CHY_2274 "ribosomal protein L1... 138 1.8e-09 1
TIGR_CMR|APH_1108 - symbol:APH_1108 "ribosomal protein L1... 130 1.2e-08 1
TIGR_CMR|GSU_2876 - symbol:GSU_2876 "ribosomal protein L1... 129 1.6e-08 1
TIGR_CMR|SPO_1691 - symbol:SPO_1691 "ribosomal protein L1... 127 2.6e-08 1
TIGR_CMR|BA_0143 - symbol:BA_0143 "ribosomal protein L13"... 125 4.2e-08 1
TIGR_CMR|ECH_1019 - symbol:ECH_1019 "ribosomal protein L1... 119 1.8e-07 1
ZFIN|ZDB-GENE-060825-257 - symbol:zgc:153172 "zgc:153172"... 124 3.5e-07 1
TAIR|locus:2203010 - symbol:emb1473 "embryo defective 147... 119 4.3e-07 1
SGD|S000000350 - symbol:MRPS9 "Mitochondrial ribosomal pr... 118 8.2e-07 1
TIGR_CMR|NSE_0840 - symbol:NSE_0840 "ribosomal protein L1... 110 1.6e-06 1
POMBASE|SPAC29A4.03c - symbol:SPAC29A4.03c "mitochondrial... 115 1.7e-06 1
TAIR|locus:2103035 - symbol:AT3G04230 species:3702 "Arabi... 101 6.7e-05 1
TAIR|locus:2146273 - symbol:AT5G18380 species:3702 "Arabi... 101 6.7e-05 1
RGD|1306558 - symbol:Mrps9 "mitochondrial ribosomal prote... 109 7.1e-05 1
UNIPROTKB|P66065 - symbol:rplM "50S ribosomal protein L13... 101 7.5e-05 1
FB|FBgn0037529 - symbol:mRpS9 "mitochondrial ribosomal pr... 109 9.2e-05 1
TAIR|locus:2052120 - symbol:AT2G09990 species:3702 "Arabi... 100 0.00010 1
UNIPROTKB|E1BAT6 - symbol:E1BAT6 "Uncharacterized protein... 99 0.00014 1
TIGR_CMR|CJE_1653 - symbol:CJE_1653 "ribosomal protein L1... 97 0.00023 1
FB|FBgn0034743 - symbol:RpS16 "Ribosomal protein S16" spe... 98 0.00029 1
CGD|CAL0004144 - symbol:orf19.3348 species:5476 "Candida ... 100 0.00040 1
TIGR_CMR|DET_0505 - symbol:DET_0505 "ribosomal protein L1... 96 0.00041 1
DICTYBASE|DDB_G0274959 - symbol:mrpl13 "ribosomal protein... 84 0.00050 2
GENEDB_PFALCIPARUM|PF11_0382 - symbol:PF11_0382 "ribosoma... 103 0.00060 1
UNIPROTKB|Q8IHZ4 - symbol:PF11_0382 "Mitochondrial riboso... 103 0.00060 1
GENEDB_PFALCIPARUM|PF14_0132 - symbol:PF14_0132 "ribosoma... 106 0.00065 1
UNIPROTKB|Q8ILW1 - symbol:PF14_0132 "40S ribosomal protei... 106 0.00065 1
MGI|MGI:1916777 - symbol:Mrps9 "mitochondrial ribosomal p... 104 0.00068 1
UNIPROTKB|Q3T0X6 - symbol:RPS16 "40S ribosomal protein S1... 95 0.00081 1
UNIPROTKB|P62249 - symbol:RPS16 "40S ribosomal protein S1... 95 0.00081 1
UNIPROTKB|F1SEG5 - symbol:F1SEG5 "Uncharacterized protein... 95 0.00081 1
UNIPROTKB|Q29201 - symbol:RPS16 "40S ribosomal protein S1... 95 0.00081 1
MGI|MGI:98118 - symbol:Rps16 "ribosomal protein S16" spec... 95 0.00081 1
RGD|621031 - symbol:Rps16 "ribosomal protein S16" species... 95 0.00081 1
>TIGR_CMR|GSU_2875 [details] [associations]
symbol:GSU_2875 "ribosomal protein S9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_953917.1 ProteinModelPortal:Q748X5 SMR:Q748X5
GeneID:2688687 KEGG:gsu:GSU2875 PATRIC:22028611
BioCyc:GSUL243231:GH27-2864-MONOMER Uniprot:Q748X5
Length = 130
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 46/84 (54%), Positives = 66/84 (78%)
Query: 67 VNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFD 126
++Y YGTG+RKS++ARV++K G+G + IN P D+YF R+T M++ QPL+L + FD
Sbjct: 4 ISY-YGTGKRKSSVARVWLKPGTGAIVINNKPIDEYFGRETSKMIVKQPLELVEKVGAFD 62
Query: 127 IKINVRGGGESGQYGAVRHGITRA 150
I +NVRGGG+SGQ GA++HGIT+A
Sbjct: 63 IYVNVRGGGDSGQAGAIKHGITKA 86
>TIGR_CMR|SO_3939 [details] [associations]
symbol:SO_3939 "ribosomal protein S9" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:NP_719470.1 ProteinModelPortal:Q8EAG3 SMR:Q8EAG3
GeneID:1171577 KEGG:son:SO_3939 PATRIC:23527556 Uniprot:Q8EAG3
Length = 130
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 71 YGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKIN 130
YGTGRRK++ ARVF K GSG + +N+ P D+YF R+T MV+ QPL+L + T DI +
Sbjct: 7 YGTGRRKTSTARVFAKAGSGNIVVNQRPLDQYFGRETARMVVRQPLELVEMTDKLDIYVT 66
Query: 131 VRGGGESGQYGAVRHGITRAFNQL 154
V+GGG +GQ GA+RHGITRA QL
Sbjct: 67 VKGGGITGQAGAIRHGITRALMQL 90
>UNIPROTKB|P0A7X3 [details] [associations]
symbol:rpsI "30S ribosomal subunit protein S9"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
DrugBank:DB01017 DrugBank:DB00254 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW DrugBank:DB00759 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02130 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G
PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87
PDBsum:1VS5 PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9
PDBsum:2GYB PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN
PDBsum:2QB9 PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH
PDBsum:2QBJ PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0
PDBsum:2VHO PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K
PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C
PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z
PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z
PDBsum:3J10 PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ
PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP
PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I
PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2 DrugBank:DB00453
DrugBank:DB00618 DrugBank:DB00256 DrugBank:DB00595 DrugBank:DB00560
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:H65114
RefSeq:NP_417697.1 RefSeq:YP_491414.1 ProteinModelPortal:P0A7X3
SMR:P0A7X3 DIP:DIP-35799N IntAct:P0A7X3 MINT:MINT-1290939
PaxDb:P0A7X3 PRIDE:P0A7X3 EnsemblBacteria:EBESCT00000000423
EnsemblBacteria:EBESCT00000018245 GeneID:12933452 GeneID:949000
KEGG:ecj:Y75_p3150 KEGG:eco:b3230 PATRIC:32121886 EchoBASE:EB0901
EcoGene:EG10908 BioCyc:EcoCyc:EG10908-MONOMER
BioCyc:ECOL316407:JW3199-MONOMER EvolutionaryTrace:P0A7X3
Genevestigator:P0A7X3 Uniprot:P0A7X3
Length = 130
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 48/83 (57%), Positives = 61/83 (73%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N YGTGRRKS+ ARVFIK G+GK+ IN+ ++YF R+T MV+ QPL+L + D+
Sbjct: 4 NQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDL 63
Query: 128 KINVRGGGESGQYGAVRHGITRA 150
I V+GGG SGQ GA+RHGITRA
Sbjct: 64 YITVKGGGISGQAGAIRHGITRA 86
>TIGR_CMR|CPS_4442 [details] [associations]
symbol:CPS_4442 "ribosomal protein S9" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR HAMAP:MF_00532_B RefSeq:YP_271090.1 HSSP:P0A7X3
ProteinModelPortal:Q47VT2 SMR:Q47VT2 STRING:Q47VT2 GeneID:3519640
KEGG:cps:CPS_4442 PATRIC:21471721
BioCyc:CPSY167879:GI48-4451-MONOMER Uniprot:Q47VT2
Length = 130
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 48/83 (57%), Positives = 61/83 (73%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N YGTGRRKS+ ARVF+K G+G +TIN+ +YF R+T MV+ QPL+L + + FD
Sbjct: 4 NQYYGTGRRKSSTARVFMKAGNGAITINKRDISEYFGRETARMVVRQPLELVEMLEKFDF 63
Query: 128 KINVRGGGESGQYGAVRHGITRA 150
I+V GGG SGQ GA+RHGITRA
Sbjct: 64 NISVVGGGISGQAGAIRHGITRA 86
>UNIPROTKB|Q9KUF0 [details] [associations]
symbol:rpsI "30S ribosomal protein S9" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
PIR:C82308 RefSeq:NP_230222.1 ProteinModelPortal:Q9KUF0 SMR:Q9KUF0
DNASU:2615248 GeneID:2615248 KEGG:vch:VC0571 PATRIC:20080258
Uniprot:Q9KUF0
Length = 130
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N YGTGRRKS+ ARVFIK GSG + IN+ ++YF R T MV+ QPL+L + D+
Sbjct: 4 NQYYGTGRRKSSAARVFIKPGSGNIVINKRSLEEYFGRPTSCMVVKQPLELVDMVEKLDL 63
Query: 128 KINVRGGGESGQYGAVRHGITRA 150
I V+GGG SGQ GA+RHGITRA
Sbjct: 64 YITVKGGGISGQAGAIRHGITRA 86
>TIGR_CMR|VC_0571 [details] [associations]
symbol:VC_0571 "ribosomal protein S9" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B PIR:C82308 RefSeq:NP_230222.1
ProteinModelPortal:Q9KUF0 SMR:Q9KUF0 DNASU:2615248 GeneID:2615248
KEGG:vch:VC0571 PATRIC:20080258 Uniprot:Q9KUF0
Length = 130
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 48/83 (57%), Positives = 59/83 (71%)
Query: 68 NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDI 127
N YGTGRRKS+ ARVFIK GSG + IN+ ++YF R T MV+ QPL+L + D+
Sbjct: 4 NQYYGTGRRKSSAARVFIKPGSGNIVINKRSLEEYFGRPTSCMVVKQPLELVDMVEKLDL 63
Query: 128 KINVRGGGESGQYGAVRHGITRA 150
I V+GGG SGQ GA+RHGITRA
Sbjct: 64 YITVKGGGISGQAGAIRHGITRA 86
>TIGR_CMR|CBU_1748 [details] [associations]
symbol:CBU_1748 "ribosomal protein S9" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:NP_820728.1
ProteinModelPortal:Q83AX9 SMR:Q83AX9 GeneID:1209659
KEGG:cbu:CBU_1748 PATRIC:17932237
BioCyc:CBUR227377:GJ7S-1722-MONOMER Uniprot:Q83AX9
Length = 139
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 49/95 (51%), Positives = 68/95 (71%)
Query: 60 LQKAVKVVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPL-KL 118
+ +A K N GTGRRK++ ARVF++ G+G++ IN +P D+YF R+T MV+ QPL KL
Sbjct: 1 MAQAAKKQNL--GTGRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKL 58
Query: 119 TKHTKTFDIKINVRGGGESGQYGAVRHGITRAFNQ 153
++ FD+ V+GGG+SGQ GA+RHGITRA Q
Sbjct: 59 DVQSR-FDVYATVQGGGDSGQAGAIRHGITRALIQ 92
>TIGR_CMR|CHY_2273 [details] [associations]
symbol:CHY_2273 "ribosomal protein S9" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR HAMAP:MF_00532_B RefSeq:YP_361082.1
ProteinModelPortal:Q3A9V2 SMR:Q3A9V2 STRING:Q3A9V2 GeneID:3728242
KEGG:chy:CHY_2273 PATRIC:21277617
BioCyc:CHYD246194:GJCN-2272-MONOMER Uniprot:Q3A9V2
Length = 130
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 49/88 (55%), Positives = 60/88 (68%)
Query: 66 VVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTF 125
VVN+ YGTGRRK A+ARVF+ G G +TIN ++YF RKT +++ QPL+LT F
Sbjct: 3 VVNF-YGTGRRKEAVARVFVVPGEGNITINGKSLEEYFPRKTLQIIVKQPLELTNTVGKF 61
Query: 126 DIKINVRGGGESGQYGAVRHGITRAFNQ 153
D+K V GGG SGQ GAVR GI RA Q
Sbjct: 62 DVKAKVHGGGISGQAGAVRLGIARALVQ 89
>TIGR_CMR|SPO_1692 [details] [associations]
symbol:SPO_1692 "ribosomal protein S9" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_166931.1
ProteinModelPortal:Q5LSS4 SMR:Q5LSS4 GeneID:3193551
KEGG:sil:SPO1692 PATRIC:23376709 Uniprot:Q5LSS4
Length = 160
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 71 YGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKIN 130
Y TG+RK A+ARV+IK GSGK+ +N D YF+R +++ QP ++ FD+
Sbjct: 37 YATGKRKDAVARVWIKPGSGKVVVNGKDQDAYFARPVLQLILRQPFQVAGVEGQFDVMAT 96
Query: 131 VRGGGESGQYGAVRHGITRA 150
V+GGG +GQ GAV+HGI++A
Sbjct: 97 VKGGGLTGQAGAVKHGISKA 116
>TAIR|locus:2101373 [details] [associations]
symbol:AT3G49080 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP002686 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
HAMAP:MF_00532_B EMBL:AY140063 EMBL:BT006583 EMBL:AK176622
IPI:IPI00546202 RefSeq:NP_190477.2 UniGene:At.35650
ProteinModelPortal:Q8L6Z4 SMR:Q8L6Z4 IntAct:Q8L6Z4 STRING:Q8L6Z4
PRIDE:Q8L6Z4 EnsemblPlants:AT3G49080.1 GeneID:824070
KEGG:ath:AT3G49080 TAIR:At3g49080 InParanoid:Q8L6Z4 OMA:GNEWEET
PhylomeDB:Q8L6Z4 ProtClustDB:CLSN2680367 Genevestigator:Q8L6Z4
Uniprot:Q8L6Z4
Length = 430
Score = 192 (72.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 47/103 (45%), Positives = 60/103 (58%)
Query: 49 LKMQEDFP-GRVLQKAVKVVNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKT 107
L+MQED RV Q V YGTGRRK +IARV+I+ G GK +N D YF
Sbjct: 286 LQMQEDIAKARVRQ--VDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLD 343
Query: 108 GLMVISQPLKLTKHTKTFDIKINVRGGGESGQYGAVRHGITRA 150
+ +PL TK +DIK V+GGG +GQ GA++ GI+RA
Sbjct: 344 HRAALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRA 386
>TIGR_CMR|BA_0144 [details] [associations]
symbol:BA_0144 "ribosomal protein S9" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
RefSeq:NP_842711.1 RefSeq:YP_016749.1 RefSeq:YP_026430.1
ProteinModelPortal:Q81VP8 SMR:Q81VP8 DNASU:1086438
EnsemblBacteria:EBBACT00000012383 EnsemblBacteria:EBBACT00000013924
EnsemblBacteria:EBBACT00000021050 GeneID:1086438 GeneID:2819069
GeneID:2850884 KEGG:ban:BA_0144 KEGG:bar:GBAA_0144 KEGG:bat:BAS0144
OMA:IKQGAAR ProtClustDB:PRK00132 BioCyc:BANT260799:GJAJ-155-MONOMER
BioCyc:BANT261594:GJ7F-157-MONOMER HAMAP:MF_00532_B Uniprot:Q81VP8
Length = 130
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 67 VNYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFD 126
V Y YGTGRRKS++ARV + G G++ IN + Y V+ QPL T+ +D
Sbjct: 4 VQY-YGTGRRKSSVARVRLVSGEGRVIINGRDFENYIPFAALREVVKQPLVATETLGNYD 62
Query: 127 IKINVRGGGESGQYGAVRHGITRA 150
+ +NV GGG +GQ GA+RHGI+RA
Sbjct: 63 VLVNVNGGGYTGQAGAIRHGISRA 86
>TIGR_CMR|ECH_1018 [details] [associations]
symbol:ECH_1018 "ribosomal protein S9" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_507804.1 ProteinModelPortal:Q2GFH9 STRING:Q2GFH9
GeneID:3927788 KEGG:ech:ECH_1018 PATRIC:20577406
BioCyc:ECHA205920:GJNR-1021-MONOMER Uniprot:Q2GFH9
Length = 152
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 62 KAVKVV--NYKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLT 119
KAVKV YGTGRRK A+ARV++ +G G +T+N + YF + T + P +T
Sbjct: 18 KAVKVDARGRAYGTGRRKEAVARVWLTVGKGNVTVNGLDIFNYFKKNTLCRKVYNPFIVT 77
Query: 120 KHTKTFDIKINVRGGGESGQYGAVRHGITRAFNQL 154
+ +++ V GGG SGQ GAV HGI++A +
Sbjct: 78 STSGCYNVVATVSGGGISGQAGAVAHGISKALKDI 112
>TIGR_CMR|APH_1107 [details] [associations]
symbol:APH_1107 "ribosomal protein S9" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_505655.1 ProteinModelPortal:Q2GIZ6 STRING:Q2GIZ6
GeneID:3930317 KEGG:aph:APH_1107 PATRIC:20950972
BioCyc:APHA212042:GHPM-1113-MONOMER Uniprot:Q2GIZ6
Length = 149
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 71 YGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKIN 130
YGTG RK+A+A+V++K+GSG +T+N + YF R+ + P + +D++
Sbjct: 26 YGTGSRKNAVAKVWLKVGSGVVTVNGMECAAYFGREALCKRVFNPFHVASSVGCYDVRAV 85
Query: 131 VRGGGESGQYGAVRHGITRAFNQL 154
V GGG+SGQ GAV HGI++A +
Sbjct: 86 VFGGGKSGQAGAVAHGISKALKDI 109
>TIGR_CMR|CJE_1652 [details] [associations]
symbol:CJE_1652 "ribosomal protein S9" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996
InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_179633.1
ProteinModelPortal:Q5HSV2 STRING:Q5HSV2 PRIDE:Q5HSV2 GeneID:3232280
KEGG:cjr:CJE1652 PATRIC:20045099
BioCyc:CJEJ195099:GJC0-1682-MONOMER Uniprot:Q5HSV2
Length = 129
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 71 YGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMV-ISQPLKLTKHTKTFDIKI 129
Y TG+RK+AIA+V++K GSGK+++N + + + + + + QPL +TK + DIK
Sbjct: 5 YATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIKLKVVQPLLVTKQETSMDIKA 64
Query: 130 NVRGGGESGQYGAVRHGITRA 150
GGG S Q A+RHGI+RA
Sbjct: 65 TTLGGGYSAQAEALRHGISRA 85
>TIGR_CMR|CPS_4443 [details] [associations]
symbol:CPS_4443 "ribosomal protein L13" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
RefSeq:YP_271091.1 HSSP:P0AA10 ProteinModelPortal:Q47VT1 SMR:Q47VT1
STRING:Q47VT1 GeneID:3518471 KEGG:cps:CPS_4443 PATRIC:21471723
BioCyc:CPSY167879:GI48-4452-MONOMER Uniprot:Q47VT1
Length = 142
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
WFL+DA++K LGR+A++IA LRGKHK EYTPH+DTG
Sbjct: 15 WFLVDAEDKTLGRIATEIATRLRGKHKAEYTPHVDTG 51
>UNIPROTKB|P66639 [details] [associations]
symbol:rpsI "30S ribosomal protein S9" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035
PANTHER:PTHR21569 OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
PIR:H70976 RefSeq:NP_217959.1 RefSeq:NP_338074.1
RefSeq:YP_006516931.1 ProteinModelPortal:P66639 SMR:P66639
PRIDE:P66639 EnsemblBacteria:EBMYCT00000001879
EnsemblBacteria:EBMYCT00000070092 GeneID:13317049 GeneID:887488
GeneID:922956 KEGG:mtc:MT3547 KEGG:mtu:Rv3442c KEGG:mtv:RVBD_3442c
PATRIC:18129535 TubercuList:Rv3442c Uniprot:P66639
Length = 151
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVRG 133
GRRK A+ RV + G+GK +N + YF K +I PL ++FDI ++ G
Sbjct: 31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFPNKVHQQLIKAPLVTVDRVESFDIFAHLGG 90
Query: 134 GGESGQYGAVRHGITRA 150
GG SGQ GA+R GI RA
Sbjct: 91 GGPSGQAGALRLGIARA 107
>TIGR_CMR|NSE_0839 [details] [associations]
symbol:NSE_0839 "ribosomal protein S9" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0103 HOGENOM:HOG000019802
KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569 OMA:IKQGAAR
ProtClustDB:PRK00132 HAMAP:MF_00532_B RefSeq:YP_506707.1
ProteinModelPortal:Q2GCT9 SMR:Q2GCT9 STRING:Q2GCT9 GeneID:3931863
KEGG:nse:NSE_0839 PATRIC:22681673
BioCyc:NSEN222891:GHFU-844-MONOMER Uniprot:Q2GCT9
Length = 145
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 62 KAVKVVNYK---YGTGRRKSAIARVFIKIGSGKMTINR-IPADKYFSRKTGLMVISQPLK 117
K V VV+ + YGTGRRK+++ARV++K G+G IN Y + + PL+
Sbjct: 9 KRVPVVDRQGRAYGTGRRKTSVARVWVKAGTGSFRINGGSNLASYLRHQYLCQDVCLPLR 68
Query: 118 LTKHTKTFDIKINVRGGGESGQYGAVRHGITRA 150
+ FD+ V+GGG SGQ GA+R G++RA
Sbjct: 69 VCDVAGKFDVFATVKGGGISGQAGALRLGLSRA 101
>TIGR_CMR|DET_0506 [details] [associations]
symbol:DET_0506 "ribosomal protein S9" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103
HOGENOM:HOG000019802 KO:K02996 InterPro:IPR023035 PANTHER:PTHR21569
OMA:IKQGAAR ProtClustDB:PRK00132 HAMAP:MF_00532_B
RefSeq:YP_181250.1 ProteinModelPortal:Q3Z949 STRING:Q3Z949
GeneID:3230209 KEGG:det:DET0506 PATRIC:21608081
BioCyc:DETH243164:GJNF-506-MONOMER Uniprot:Q3Z949
Length = 132
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 69 YKYGTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIK 128
Y G GRRK+A+A V + G+G + I+ P ++ F+R VI P+ +T ++
Sbjct: 7 YFIGVGRRKTAVATVKLTSGNGVIVIDGKPIEERFTRVQERNVILNPMMVTDTMGKYNAV 66
Query: 129 INVRGGGESGQYGAVRHGITRAFNQ 153
I V GGG +GQ GA+ HGI RA +
Sbjct: 67 IKVLGGGVAGQSGAIAHGIARALEK 91
>TIGR_CMR|SO_3940 [details] [associations]
symbol:SO_3940 "ribosomal protein L13" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10
RefSeq:NP_719471.1 ProteinModelPortal:Q8EAG2 SMR:Q8EAG2
GeneID:1171578 KEGG:son:SO_3940 PATRIC:23527558 Uniprot:Q8EAG2
Length = 142
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
WF++DA K LGR+A++IA+ LRGKHK EYTPH+DTG
Sbjct: 15 WFVVDADGKTLGRIATEIALRLRGKHKPEYTPHVDTG 51
>UNIPROTKB|Q9KUF1 [details] [associations]
symbol:rplM "50S ribosomal protein L13" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216
HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10 PIR:B82308
RefSeq:NP_230221.1 ProteinModelPortal:Q9KUF1 SMR:Q9KUF1
DNASU:2615247 GeneID:2615247 KEGG:vch:VC0570 PATRIC:20080256
Uniprot:Q9KUF1
Length = 142
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W+++DA+ K LGR+AS+IA LRGKHK EYTPH+DTG
Sbjct: 15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTG 51
>TIGR_CMR|VC_0570 [details] [associations]
symbol:VC_0570 "ribosomal protein L13" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216
HAMAP:MF_01366_B OMA:MLPKTRL HSSP:P0AA10 PIR:B82308
RefSeq:NP_230221.1 ProteinModelPortal:Q9KUF1 SMR:Q9KUF1
DNASU:2615247 GeneID:2615247 KEGG:vch:VC0570 PATRIC:20080256
Uniprot:Q9KUF1
Length = 142
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W+++DA+ K LGR+AS+IA LRGKHK EYTPH+DTG
Sbjct: 15 WYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDTG 51
>TAIR|locus:2037222 [details] [associations]
symbol:RPS9 "ribosomal protein S9" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0000312 "plastid small ribosomal subunit"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0016020 GO:GO:0006412
GO:GO:0009941 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC008263
GO:GO:0000312 EMBL:AB022676 EMBL:AF344318 EMBL:AY045856
EMBL:AY045600 EMBL:AY091382 EMBL:AY086419 IPI:IPI00516738
PIR:T52450 RefSeq:NP_177635.1 UniGene:At.384 UniGene:At.74895
ProteinModelPortal:Q9XJ27 SMR:Q9XJ27 STRING:Q9XJ27 PaxDb:Q9XJ27
PRIDE:Q9XJ27 EnsemblPlants:AT1G74970.1 GeneID:843836
KEGG:ath:AT1G74970 GeneFarm:38 TAIR:At1g74970 eggNOG:COG0103
HOGENOM:HOG000019802 InParanoid:Q9XJ27 KO:K02996 OMA:RDTRIVE
PhylomeDB:Q9XJ27 ProtClustDB:CLSN2682465 Genevestigator:Q9XJ27
GermOnline:AT1G74970 InterPro:IPR023035 PANTHER:PTHR21569
Uniprot:Q9XJ27
Length = 208
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 72 GTGRRKSAIARVFIKIGSGKMTINRIPADKYFS-RKTGLMVISQPLKLTKHTKTFDIKIN 130
GTGRRK AIARV ++ G+GK+ IN A +Y L + PL + ++DI +
Sbjct: 85 GTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYENSYDIFVK 144
Query: 131 VRGGGESGQYGAVRHGITRA 150
GGG SGQ A+ G+ RA
Sbjct: 145 AHGGGLSGQAQAITLGVARA 164
>UNIPROTKB|P0AA10 [details] [associations]
symbol:rplM species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0008270 EMBL:U18997
GO:GO:0005840 GO:GO:0003735 PDB:2RDO PDBsum:2RDO eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066 PDB:3J0T PDB:3J0W
PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2WWQ
PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D
PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU
OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B EMBL:X02130
PIR:A02787 RefSeq:NP_417698.1 RefSeq:YP_491415.1 PDB:3BBX
PDBsum:3BBX ProteinModelPortal:P0AA10 SMR:P0AA10 DIP:DIP-47837N
IntAct:P0AA10 MINT:MINT-1269598 PaxDb:P0AA10 PRIDE:P0AA10
EnsemblBacteria:EBESCT00000001772 EnsemblBacteria:EBESCT00000018148
GeneID:12932920 GeneID:947828 KEGG:ecj:Y75_p3151 KEGG:eco:b3231
PATRIC:32121888 EchoBASE:EB0867 EcoGene:EG10874
BioCyc:EcoCyc:EG10874-MONOMER BioCyc:ECOL316407:JW3200-MONOMER
EvolutionaryTrace:P0AA10 Genevestigator:P0AA10 Uniprot:P0AA10
Length = 142
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W+++DA K LGR+A+++A LRGKHK EYTPH+DTG
Sbjct: 15 WYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTG 51
>TIGR_CMR|CHY_2274 [details] [associations]
symbol:CHY_2274 "ribosomal protein L13" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
RefSeq:YP_361083.1 ProteinModelPortal:Q3A9V1 SMR:Q3A9V1
STRING:Q3A9V1 GeneID:3726760 KEGG:chy:CHY_2274 PATRIC:21277619
BioCyc:CHYD246194:GJCN-2273-MONOMER Uniprot:Q3A9V1
Length = 143
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W++IDA K LGRVAS+ A LRGKHK E+TPH+DTG
Sbjct: 16 WYVIDAAGKPLGRVASEAAKLLRGKHKPEFTPHVDTG 52
>TIGR_CMR|APH_1108 [details] [associations]
symbol:APH_1108 "ribosomal protein L13" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
RefSeq:YP_505656.1 ProteinModelPortal:Q2GIZ5 SMR:Q2GIZ5
STRING:Q2GIZ5 GeneID:3930273 KEGG:aph:APH_1108 PATRIC:20950974
OMA:YTPHMDC ProtClustDB:PRK09216
BioCyc:APHA212042:GHPM-1114-MONOMER HAMAP:MF_01366_B Uniprot:Q2GIZ5
Length = 158
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W LIDA + ++GR+A+ IA LRGKHK EYTPH+D G
Sbjct: 15 WVLIDASDMVVGRLAAYIATILRGKHKPEYTPHMDCG 51
>TIGR_CMR|GSU_2876 [details] [associations]
symbol:GSU_2876 "ribosomal protein L13" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HSSP:O59300 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
RefSeq:NP_953918.1 ProteinModelPortal:Q748X4 SMR:Q748X4
GeneID:2688685 KEGG:gsu:GSU2876 PATRIC:22028613
HOGENOM:HOG000225288 BioCyc:GSUL243231:GH27-2865-MONOMER
Uniprot:Q748X4
Length = 143
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTGYPGGIRKINFLKMQ 52
W+L+DA NK+LGR+A++IA LRGK K YTP +DTG + +N K+Q
Sbjct: 16 WYLVDADNKVLGRMATEIANILRGKKKPIYTPSVDTG--DFVVVVNAAKLQ 64
>TIGR_CMR|SPO_1691 [details] [associations]
symbol:SPO_1691 "ribosomal protein L13" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HSSP:O59300 HOGENOM:HOG000225286 KO:K02871
TIGRFAMs:TIGR01066 OMA:YTPHMDC ProtClustDB:PRK09216
HAMAP:MF_01366_B RefSeq:YP_166930.1 ProteinModelPortal:Q5LSS5
SMR:Q5LSS5 GeneID:3193556 KEGG:sil:SPO1691 PATRIC:23376707
Uniprot:Q5LSS5
Length = 152
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTGYPGGIRKINFLKMQ 52
W LIDA+ +LGR+AS +A+ LRGKHK +TPH+D G + IN K+Q
Sbjct: 15 WILIDAEGVVLGRLASIVAMRLRGKHKASFTPHMDMG--DNVIVINADKVQ 63
>TIGR_CMR|BA_0143 [details] [associations]
symbol:BA_0143 "ribosomal protein L13" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 HSSP:O59300 HOGENOM:HOG000225286
KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216 HAMAP:MF_01366_B
RefSeq:NP_842710.1 RefSeq:YP_016748.1 RefSeq:YP_026429.1
ProteinModelPortal:Q81VP9 SMR:Q81VP9 DNASU:1086446
EnsemblBacteria:EBBACT00000011142 EnsemblBacteria:EBBACT00000017416
EnsemblBacteria:EBBACT00000024437 GeneID:1086446 GeneID:2819438
GeneID:2851608 KEGG:ban:BA_0143 KEGG:bar:GBAA_0143 KEGG:bat:BAS0143
OMA:MLPKTRL BioCyc:BANT260799:GJAJ-154-MONOMER
BioCyc:BANT261594:GJ7F-156-MONOMER Uniprot:Q81VP9
Length = 145
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W+++DA+ + LGR+AS++A LRGK+K +TPH+DTG
Sbjct: 16 WYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTG 52
>TIGR_CMR|ECH_1019 [details] [associations]
symbol:ECH_1019 "ribosomal protein L13" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B
RefSeq:YP_507805.1 ProteinModelPortal:Q2GFH8 STRING:Q2GFH8
GeneID:3927274 KEGG:ech:ECH_1019 PATRIC:20577408
BioCyc:ECHA205920:GJNR-1022-MONOMER Uniprot:Q2GFH8
Length = 156
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/134 (30%), Positives = 64/134 (47%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTGYPGGIRKINFLKMQEDFPGRVLQ 61
W +IDA ++GR+A+ +A LRGK K EYTPH+D G + IN K+ F G L+
Sbjct: 17 WVVIDADGVVVGRLAAFVANILRGKDKPEYTPHMDCG--DNVIIINAEKVH--FTGSKLK 72
Query: 62 KAVKVVNYKYGTGRRKSAIARVFIKIGSGK---MTINRIPADKYFSRKT--GLMVISQPL 116
V + Y G + A +F+ + M + R+ + +R+ L V S P
Sbjct: 73 NKVYYRHTGYPGGLKSCTPADLFLNKHPERIINMAVRRMLSTGPMARRRLKNLYVYSGPE 132
Query: 117 KLTKHTKTFDIKIN 130
KH +K++
Sbjct: 133 H--KHNAQQPVKLD 144
>ZFIN|ZDB-GENE-060825-257 [details] [associations]
symbol:zgc:153172 "zgc:153172" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000754 Pfam:PF00380 ZFIN:ZDB-GENE-060825-257
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000020877
HOVERGEN:HBG023132 OrthoDB:EOG4WWRJR EMBL:BC122171 IPI:IPI00786723
RefSeq:NP_001038861.1 UniGene:Dr.37156 ProteinModelPortal:Q0P4B8
STRING:Q0P4B8 PRIDE:Q0P4B8 GeneID:751681 KEGG:dre:751681
InParanoid:Q0P4B8 NextBio:20917830 Bgee:Q0P4B8 Uniprot:Q0P4B8
Length = 385
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 38/92 (41%), Positives = 45/92 (48%)
Query: 60 LQKAVKVVNYKYGTGRRKSAIARV-FIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKL 118
LQ + V + GRRKSA ARV I GSG +TIN YF + PL
Sbjct: 249 LQHDARGVAFSVADGRRKSAKARVTLIDSGSGNITINGTNYLHYFPVLQDREQLMFPLHF 308
Query: 119 TKHTKTFDIKINVRGGGESGQYGAVRHGITRA 150
FDI+ +V G G S Q GAVR I+RA
Sbjct: 309 VGLLGRFDIEGSVEGSGRSSQAGAVRLAISRA 340
>TAIR|locus:2203010 [details] [associations]
symbol:emb1473 "embryo defective 1473" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0006412 GO:GO:0009941
GO:GO:0005840 GO:GO:0003735 GO:GO:0009579 EMBL:AC007260
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 EMBL:X87333 EMBL:AY063105 EMBL:AF370318
IPI:IPI00520181 PIR:A96815 RefSeq:NP_177984.1 UniGene:At.20962
HSSP:O59300 ProteinModelPortal:Q9SYL9 SMR:Q9SYL9 STRING:Q9SYL9
PaxDb:Q9SYL9 PRIDE:Q9SYL9 ProMEX:Q9SYL9 EnsemblPlants:AT1G78630.1
GeneID:844199 KEGG:ath:AT1G78630 GeneFarm:82 TAIR:At1g78630
HOGENOM:HOG000225286 InParanoid:Q9SYL9 KO:K02871 OMA:HVNTDKP
PhylomeDB:Q9SYL9 ProtClustDB:CLSN2679548 Genevestigator:Q9SYL9
GermOnline:AT1G78630 TIGRFAMs:TIGR01066 Uniprot:Q9SYL9
Length = 241
Score = 119 (46.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
WF++DA +KILGR+AS IA ++RGK+ YTP +D G
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMG 141
>SGD|S000000350 [details] [associations]
symbol:MRPS9 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 SGD:S000000350 EMBL:BK006936 GO:GO:0003735
GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103
HOGENOM:HOG000019802 PANTHER:PTHR21569 GeneTree:ENSGT00390000011204
OrthoDB:EOG4Z0FFW EMBL:Z36015 PIR:S46017 RefSeq:NP_009704.1
ProteinModelPortal:P38120 SMR:P38120 DIP:DIP-4924N IntAct:P38120
MINT:MINT-534540 STRING:P38120 PaxDb:P38120 EnsemblFungi:YBR146W
GeneID:852443 KEGG:sce:YBR146W CYGD:YBR146w OMA:TFYSANP
NextBio:971345 Genevestigator:P38120 GermOnline:YBR146W
Uniprot:P38120
Length = 278
Score = 118 (46.6 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVRG 133
G+RKS+ A+VF+ G+G++ +N + YF + I PL++ + ++I G
Sbjct: 158 GKRKSSTAKVFVVRGTGEILVNGRQLNDYFLKMKDRESIMYPLQVIESVGKYNIFATTSG 217
Query: 134 GGESGQYGAVRHGITRA---FNQL 154
GG +GQ ++ H I +A FN L
Sbjct: 218 GGPTGQAESIMHAIAKALVVFNPL 241
>TIGR_CMR|NSE_0840 [details] [associations]
symbol:NSE_0840 "ribosomal protein L13" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B
RefSeq:YP_506708.1 ProteinModelPortal:Q2GCT8 STRING:Q2GCT8
GeneID:3932168 KEGG:nse:NSE_0840 PATRIC:22681675
BioCyc:NSEN222891:GHFU-845-MONOMER Uniprot:Q2GCT8
Length = 152
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTGYPGGIRKINFLKMQEDFPGRVLQ 61
W ++DA + ++GR+A+ ++ LRGK K YTPH+D G + +N K++ F G +
Sbjct: 15 WIVVDATDAVVGRLAAFVSTILRGKTKPTYTPHMDCG--DNVIVVNASKVK--FSGSKMS 70
Query: 62 KAVKVVNYKYGTGRRKSAIARV 83
V + Y G + + A++
Sbjct: 71 DKVYYRHTGYPGGIKSTTPAKI 92
>POMBASE|SPAC29A4.03c [details] [associations]
symbol:SPAC29A4.03c "mitochondrial ribosomal protein
subunit Mrps9 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 PomBase:SPAC29A4.03c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103 HOGENOM:HOG000019802
PANTHER:PTHR21569 PIR:T38486 RefSeq:NP_594879.2 STRING:O14006
EnsemblFungi:SPAC29A4.03c.1 GeneID:2542620 OrthoDB:EOG4Z0FFW
NextBio:20803669 Uniprot:O14006
Length = 271
Score = 115 (45.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVRG 133
G+RKS+ A V + G+GK +N P D YF R PL +++ V G
Sbjct: 151 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRKHAVYPLAACNRLTNYNVWATVHG 210
Query: 134 GGESGQYGAVRHGITRA 150
GG +GQ GAV I+++
Sbjct: 211 GGPTGQSGAVHAAISKS 227
>TAIR|locus:2103035 [details] [associations]
symbol:AT3G04230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000754 Pfam:PF00380 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 EMBL:AC016829 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960
ProtClustDB:PLN00210 EMBL:BT004760 EMBL:AK228186 IPI:IPI00542657
RefSeq:NP_187073.1 UniGene:At.18789 ProteinModelPortal:Q9M8X9
SMR:Q9M8X9 STRING:Q9M8X9 PaxDb:Q9M8X9 PRIDE:Q9M8X9
EnsemblPlants:AT3G04230.1 GeneID:819578 KEGG:ath:AT3G04230
GeneFarm:789 TAIR:At3g04230 InParanoid:Q9M8X9 OMA:PRCHESK
PhylomeDB:Q9M8X9 Genevestigator:Q9M8X9 GermOnline:AT3G04230
Uniprot:Q9M8X9
Length = 146
Score = 101 (40.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A + K GSG + +N P + Y + L L KH D++I
Sbjct: 14 GRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVDMRIRAT 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG + + A+R I +A
Sbjct: 74 GGGNTSRVYAIRQSIAKA 91
>TAIR|locus:2146273 [details] [associations]
symbol:AT5G18380 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC051626 GO:GO:0022627
eggNOG:COG0103 PANTHER:PTHR21569 UniGene:At.48467
HOGENOM:HOG000019803 KO:K02960 ProtClustDB:PLN00210 EMBL:AF370178
EMBL:AY059138 EMBL:Z35385 EMBL:F19995 IPI:IPI00534336
RefSeq:NP_197339.1 UniGene:At.23476 ProteinModelPortal:Q42340
SMR:Q42340 STRING:Q42340 PaxDb:Q42340 EnsemblPlants:AT5G18380.1
GeneID:831956 KEGG:ath:AT5G18380 GeneFarm:790 TAIR:At5g18380
InParanoid:Q42340 OMA:RSEPKKF PhylomeDB:Q42340
Genevestigator:Q42340 GermOnline:AT5G18380 Uniprot:Q42340
Length = 146
Score = 101 (40.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A+A K GSG + +N P + + + L L KH +++I V
Sbjct: 14 GRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVNMRIRVN 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG + Q A+R I +A
Sbjct: 74 GGGHTSQVYAIRQSIAKA 91
>RGD|1306558 [details] [associations]
symbol:Mrps9 "mitochondrial ribosomal protein S9" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=ISO]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
RGD:1306558 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR21569 HOVERGEN:HBG023132 EMBL:BC088242
IPI:IPI00357889 UniGene:Rn.13913 ProteinModelPortal:Q5I0K4
STRING:Q5I0K4 UCSC:RGD:1306558 InParanoid:Q5I0K4
ArrayExpress:Q5I0K4 Genevestigator:Q5I0K4 Uniprot:Q5I0K4
Length = 338
Score = 109 (43.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFI-KIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVR 132
GRRKSA ARV + + GSGK+ +N + YF + P + D+ V
Sbjct: 216 GRRKSATARVVVYQHGSGKIHVNGVDYLLYFPILQDREQLMFPFHFLDRLEKHDVTCTVS 275
Query: 133 GGGESGQYGAVRHGITRA 150
GGG S Q GA+R + +A
Sbjct: 276 GGGRSAQAGAIRLAMAKA 293
>UNIPROTKB|P66065 [details] [associations]
symbol:rplM "50S ribosomal protein L13" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B PIR:A70977 RefSeq:NP_217960.1
RefSeq:NP_338075.1 RefSeq:YP_006516932.1 ProteinModelPortal:P66065
SMR:P66065 PhosSite:P12061578 PRIDE:P66065
EnsemblBacteria:EBMYCT00000002385 EnsemblBacteria:EBMYCT00000071846
GeneID:13317050 GeneID:887584 GeneID:926638 KEGG:mtc:MT3548
KEGG:mtu:Rv3443c KEGG:mtv:RVBD_3443c PATRIC:18129537
TubercuList:Rv3443c OMA:FEITQVA ChEMBL:CHEMBL1933 Uniprot:P66065
Length = 147
Score = 101 (40.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W++IDA + +LGR+A A LRGKHK + P++D G
Sbjct: 15 WYVIDATDVVLGRLAVAAANLLRGKHKPTFAPNVDGG 51
>FB|FBgn0037529 [details] [associations]
symbol:mRpS9 "mitochondrial ribosomal protein S9"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] InterPro:IPR000754 Pfam:PF00380 EMBL:AE014297
GO:GO:0006412 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 eggNOG:COG0103
PANTHER:PTHR21569 CTD:64965 GeneTree:ENSGT00390000011204
OMA:ARPVMKH EMBL:AY089671 RefSeq:NP_524270.2 UniGene:Dm.2469
SMR:Q8SXF0 MINT:MINT-942222 STRING:Q8SXF0
EnsemblMetazoa:FBtr0081766 GeneID:40932 KEGG:dme:Dmel_CG2957
UCSC:CG2957-RA FlyBase:FBgn0037529 InParanoid:Q8SXF0
OrthoDB:EOG4XGXFH GenomeRNAi:40932 NextBio:821347 Uniprot:Q8SXF0
Length = 395
Score = 109 (43.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 76 RKSAIARVFIKI-GSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVRGG 134
RK+A A V +++ G+GK++IN YF + + PL+ ++ D++ NV GG
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDIS-YFEDENCREQLLFPLQFSELLGKVDVEANVEGG 334
Query: 135 GESGQYGAVRHGI 147
G SGQ GA+R GI
Sbjct: 335 GPSGQAGAIRWGI 347
>TAIR|locus:2052120 [details] [associations]
symbol:AT2G09990 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380
PROSITE:PS00360 GO:GO:0009506 GO:GO:0005618 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103
PANTHER:PTHR21569 EMBL:AC006586 EMBL:AF370576 EMBL:AY086902
IPI:IPI00545691 PIR:E84489 RefSeq:NP_178826.1 UniGene:At.48467
UniGene:At.72563 ProteinModelPortal:Q9SK22 SMR:Q9SK22 STRING:Q9SK22
PaxDb:Q9SK22 PRIDE:Q9SK22 EnsemblPlants:AT2G09990.1 GeneID:815456
KEGG:ath:AT2G09990 GeneFarm:788 TAIR:At2g09990 HOGENOM:HOG000019803
InParanoid:Q9SK22 KO:K02960 OMA:GGGFMGQ PhylomeDB:Q9SK22
ProtClustDB:PLN00210 Genevestigator:Q9SK22 GermOnline:AT2G09990
Uniprot:Q9SK22
Length = 146
Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A+A K GSG + +N P + + + L L KH +++I V
Sbjct: 14 GRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVNMRIRVN 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG + Q A+R I +A
Sbjct: 74 GGGHTSQVYAIRQSIAKA 91
>UNIPROTKB|E1BAT6 [details] [associations]
symbol:E1BAT6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 OMA:RSEPKKF
GeneTree:ENSGT00390000013067 EMBL:DAAA02009362 IPI:IPI00701999
Ensembl:ENSBTAT00000002015 NextBio:20870670 Uniprot:E1BAT6
Length = 145
Score = 99 (39.9 bits), Expect = 0.00014, P = 0.00014
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVRG 133
G +K+A A K G+G + +N P + R ++ L L K DI++ V+G
Sbjct: 14 GHKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAVDIRVRVKG 73
Query: 134 GGESGQYGAVRHGITRA 150
GG Q A+R I++A
Sbjct: 74 GGHVAQIYAIRQSISKA 90
>TIGR_CMR|CJE_1653 [details] [associations]
symbol:CJE_1653 "ribosomal protein L13" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
OMA:YTPHMDC ProtClustDB:PRK09216 HAMAP:MF_01366_B PIR:E81294
RefSeq:YP_179634.1 ProteinModelPortal:Q5HSV1 STRING:Q5HSV1
GeneID:3232281 KEGG:cjr:CJE1653 PATRIC:20045101
BioCyc:CJEJ195099:GJC0-1683-MONOMER Uniprot:Q5HSV1
Length = 141
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W ++DA+ K GR+ +++A LRGK+K +TP++D G
Sbjct: 14 WIVLDAEGKRFGRLLTEVATILRGKNKPCFTPNVDCG 50
>FB|FBgn0034743 [details] [associations]
symbol:RpS16 "Ribosomal protein S16" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 EMBL:AE013599
GO:GO:0005811 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000022 eggNOG:COG0103 PANTHER:PTHR21569
KO:K02960 OMA:GGGFMGQ GeneTree:ENSGT00390000013067 CTD:6217
EMBL:AY070671 RefSeq:NP_611685.1 UniGene:Dm.7604
ProteinModelPortal:Q9W237 SMR:Q9W237 MINT:MINT-900418 STRING:Q9W237
PaxDb:Q9W237 PRIDE:Q9W237 EnsemblMetazoa:FBtr0071855 GeneID:37580
KEGG:dme:Dmel_CG4046 FlyBase:FBgn0034743 InParanoid:Q9W237
OrthoDB:EOG4PRR75 PhylomeDB:Q9W237 ChiTaRS:RPS16 GenomeRNAi:37580
NextBio:804391 Bgee:Q9W237 GermOnline:CG4046 Uniprot:Q9W237
Length = 148
Score = 98 (39.6 bits), Expect = 0.00029, P = 0.00029
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT--FDIKINV 131
GR+K+A A + K G+G + +N P ++ K + +PL L K DI++ V
Sbjct: 16 GRKKTATAVAYCKRGNGLLKVNGRPLEQ-IEPKVLQYKLQEPLLLLGKEKFAGVDIRVRV 74
Query: 132 RGGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 75 SGGGHVAQIYAIRQAISKA 93
>CGD|CAL0004144 [details] [associations]
symbol:orf19.3348 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 CGD:CAL0004144 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000045 EMBL:AACQ01000042
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
RefSeq:XP_718171.1 RefSeq:XP_718438.1 ProteinModelPortal:Q5A8Y6
STRING:Q5A8Y6 GeneID:3639931 GeneID:3640222 KEGG:cal:CaO19.10856
KEGG:cal:CaO19.3348 Uniprot:Q5A8Y6
Length = 176
Score = 100 (40.3 bits), Expect = 0.00040, P = 0.00040
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 1 MWFLID--AKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
+W +D A N+ LGR+AS IA+ L GKHK YTP+ D G
Sbjct: 15 VWHHVDVAADNRSLGRLASSIAITLMGKHKPTYTPNRDHG 54
>TIGR_CMR|DET_0505 [details] [associations]
symbol:DET_0505 "ribosomal protein L13" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0102 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 HOGENOM:HOG000225286 KO:K02871
TIGRFAMs:TIGR01066 OMA:YTPHMDC ProtClustDB:PRK09216
HAMAP:MF_01366_B RefSeq:YP_181249.1 ProteinModelPortal:Q3Z950
STRING:Q3Z950 GeneID:3230210 KEGG:det:DET0505 PATRIC:21608079
BioCyc:DETH243164:GJNF-505-MONOMER Uniprot:Q3Z950
Length = 143
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 2 WFLIDAKNKILGRVASKIAVYLRGKHKTEYTPHIDTG 38
W +IDA ++LG VA++ A YL GKHK + ++D G
Sbjct: 15 WHVIDASGRVLGEVAAEAAKYLMGKHKPMFCRNLDCG 51
>DICTYBASE|DDB_G0274959 [details] [associations]
symbol:mrpl13 "ribosomal protein L13, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
dictyBase:DDB_G0274959 GO:GO:0006412 EMBL:AAFI02000012
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066
HAMAP:MF_01366_B RefSeq:XP_644226.1 ProteinModelPortal:Q554U7
STRING:Q554U7 EnsemblProtists:DDB0217569 GeneID:8619655
KEGG:ddi:DDB_G0274959 InParanoid:Q554U7 OMA:HIIRHAV Uniprot:Q554U7
Length = 227
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 1 MWFLIDAKNKILGRVASKIAVYLRGKHKTEY 31
+W +IDA +GR+A+KI+ LRGKHK Y
Sbjct: 15 LWHVIDASGHRVGRLATKISELLRGKHKPIY 45
Score = 53 (23.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 31 YTPHIDTGYPGGIRKINFLKMQEDFPGRVLQKAVKVV----NYKYGTGRRKSAIARVF 84
Y H +GYPGG+++ M + P +++ AV + N K+ G+R +F
Sbjct: 77 YRKH--SGYPGGLKETLAKDMLVENPEHIIRHAVMGMIPKNNSKFYLGKRLKIYDGIF 132
>GENEDB_PFALCIPARUM|PF11_0382 [details] [associations]
symbol:PF11_0382 "ribosomal protein S9,
putative" species:5833 "Plasmodium falciparum" [GO:0015935 "small
ribosomal subunit" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 GO:GO:0015935
PANTHER:PTHR21569 RefSeq:XP_001348052.1 ProteinModelPortal:Q8IHZ4
EnsemblProtists:PF11_0382:mRNA GeneID:810928 KEGG:pfa:PF11_0382
EuPathDB:PlasmoDB:PF3D7_1137100 HOGENOM:HOG000282467 OMA:ISECENN
ProtClustDB:CLSZ2432842 Uniprot:Q8IHZ4
Length = 300
Score = 103 (41.3 bits), Expect = 0.00060, P = 0.00060
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 72 GTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKT--GLMVISQPLKLTKHTKTFDIKI 129
G G K + A V+IK GSG + IN D Y M + +P +T FD+ I
Sbjct: 177 GIGTNKRSCAYVYIKRGSGIIKIND-KEDLYIRWPYFYNRMDVLEPFYITNTACVFDVFI 235
Query: 130 NVRGGGESGQYGAVRHGITRA 150
++GGG SGQ A R + RA
Sbjct: 236 KLKGGGISGQSKAARLAVGRA 256
>UNIPROTKB|Q8IHZ4 [details] [associations]
symbol:PF11_0382 "Mitochondrial ribosomal protein S9,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0015935
"small ribosomal subunit" evidence=ISS] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 GO:GO:0015935
PANTHER:PTHR21569 RefSeq:XP_001348052.1 ProteinModelPortal:Q8IHZ4
EnsemblProtists:PF11_0382:mRNA GeneID:810928 KEGG:pfa:PF11_0382
EuPathDB:PlasmoDB:PF3D7_1137100 HOGENOM:HOG000282467 OMA:ISECENN
ProtClustDB:CLSZ2432842 Uniprot:Q8IHZ4
Length = 300
Score = 103 (41.3 bits), Expect = 0.00060, P = 0.00060
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 72 GTGRRKSAIARVFIKIGSGKMTINRIPADKYFSRKT--GLMVISQPLKLTKHTKTFDIKI 129
G G K + A V+IK GSG + IN D Y M + +P +T FD+ I
Sbjct: 177 GIGTNKRSCAYVYIKRGSGIIKIND-KEDLYIRWPYFYNRMDVLEPFYITNTACVFDVFI 235
Query: 130 NVRGGGESGQYGAVRHGITRA 150
++GGG SGQ A R + RA
Sbjct: 236 KLKGGGISGQSKAARLAVGRA 256
>GENEDB_PFALCIPARUM|PF14_0132 [details] [associations]
symbol:PF14_0132 "ribosomal protein S9,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] [GO:0000312 "plastid small ribosomal
subunit" evidence=ISS] InterPro:IPR000754 Pfam:PF00380
GO:GO:0006412 GO:GO:0003735 EMBL:AE014187 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0020011
GO:GO:0000312 PANTHER:PTHR21569 RefSeq:XP_001348305.2
EnsemblProtists:PF14_0132:mRNA GeneID:811713 KEGG:pfa:PF14_0132
EuPathDB:PlasmoDB:PF3D7_1413400 HOGENOM:HOG000281329
ProtClustDB:CLSZ2848531 Uniprot:Q8ILW1
Length = 643
Score = 106 (42.4 bits), Expect = 0.00065, P = 0.00065
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 28 KTEYTPHIDTGYPGGIRKINFLKMQEDFPGRVLQKAVKVVNYKYGTGRRKSAIARVFIKI 87
K EY D G GI K +F K R+ K K++ +G++K A+A+VF++
Sbjct: 489 KEEYEYMFDNG---GIEKFSFDK------NRIKNKE-KLIF----SGKKKRALAQVFLER 534
Query: 88 GSGKMTINRIPADKYFSRKT-GLMVISQPL-KLTKHTKTFDIKINVRGGGESGQYGAVRH 145
G+ + IN +Y + L I PL L H + F+I V GGG SGQ A+ H
Sbjct: 535 GNNNLIINNRDGYQYLQYQILNLNKIFSPLLNLCLH-RHFNIVAKVEGGGLSGQSVAIFH 593
Query: 146 GITR 149
+ +
Sbjct: 594 ALVK 597
>UNIPROTKB|Q8ILW1 [details] [associations]
symbol:PF14_0132 "40S ribosomal protein S9A, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000312 "plastid
small ribosomal subunit" evidence=ISS] [GO:0020011 "apicoplast"
evidence=IDA] InterPro:IPR000754 Pfam:PF00380 GO:GO:0006412
GO:GO:0003735 EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0020011 GO:GO:0000312
PANTHER:PTHR21569 RefSeq:XP_001348305.2
EnsemblProtists:PF14_0132:mRNA GeneID:811713 KEGG:pfa:PF14_0132
EuPathDB:PlasmoDB:PF3D7_1413400 HOGENOM:HOG000281329
ProtClustDB:CLSZ2848531 Uniprot:Q8ILW1
Length = 643
Score = 106 (42.4 bits), Expect = 0.00065, P = 0.00065
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 28 KTEYTPHIDTGYPGGIRKINFLKMQEDFPGRVLQKAVKVVNYKYGTGRRKSAIARVFIKI 87
K EY D G GI K +F K R+ K K++ +G++K A+A+VF++
Sbjct: 489 KEEYEYMFDNG---GIEKFSFDK------NRIKNKE-KLIF----SGKKKRALAQVFLER 534
Query: 88 GSGKMTINRIPADKYFSRKT-GLMVISQPL-KLTKHTKTFDIKINVRGGGESGQYGAVRH 145
G+ + IN +Y + L I PL L H + F+I V GGG SGQ A+ H
Sbjct: 535 GNNNLIINNRDGYQYLQYQILNLNKIFSPLLNLCLH-RHFNIVAKVEGGGLSGQSVAIFH 593
Query: 146 GITR 149
+ +
Sbjct: 594 ALVK 597
>MGI|MGI:1916777 [details] [associations]
symbol:Mrps9 "mitochondrial ribosomal protein S9"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 MGI:MGI:1916777
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569 CTD:64965
GeneTree:ENSGT00390000011204 HOGENOM:HOG000020877
HOVERGEN:HBG023132 OMA:ARPVMKH OrthoDB:EOG4WWRJR EMBL:AK009082
EMBL:BC051936 EMBL:BC069980 EMBL:BC116437 IPI:IPI00336292
RefSeq:NP_076003.3 UniGene:Mm.252982 ProteinModelPortal:Q9D7N3
SMR:Q9D7N3 STRING:Q9D7N3 PhosphoSite:Q9D7N3 PaxDb:Q9D7N3
PRIDE:Q9D7N3 Ensembl:ENSMUST00000057208 GeneID:69527 KEGG:mmu:69527
InParanoid:Q14AZ3 NextBio:329674 Bgee:Q9D7N3 CleanEx:MM_MRPS9
Genevestigator:Q9D7N3 GermOnline:ENSMUSG00000060679 Uniprot:Q9D7N3
Length = 390
Score = 104 (41.7 bits), Expect = 0.00068, P = 0.00068
Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 74 GRRKSAIARVFI-KIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKTFDIKINVR 132
GRRKSA A+ + + GSGK+ +N + YF + P + D+ V
Sbjct: 268 GRRKSATAQAVVYEHGSGKIHVNGVDYLIYFPITQDREQLMFPFHFLDRLERHDVTCTVS 327
Query: 133 GGGESGQYGAVRHGITRA 150
GGG S Q GA+R + RA
Sbjct: 328 GGGRSAQAGAIRLAMARA 345
>UNIPROTKB|Q3T0X6 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 EMBL:BC102215 IPI:IPI00714445
RefSeq:NP_001028796.1 UniGene:Bt.59450 ProteinModelPortal:Q3T0X6
SMR:Q3T0X6 STRING:Q3T0X6 PRIDE:Q3T0X6 Ensembl:ENSBTAT00000028093
GeneID:506297 KEGG:bta:506297 CTD:6217 HOVERGEN:HBG055171
InParanoid:Q3T0X6 OrthoDB:EOG4XWG03 NextBio:20867545 Uniprot:Q3T0X6
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
>UNIPROTKB|P62249 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=NAS;IDA] [GO:0006412 "translation" evidence=IC;NAS;TAS]
[GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471126
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 eggNOG:COG0103 PANTHER:PTHR21569
HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ CTD:6217
HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 ChiTaRS:RPS16 EMBL:M60854
EMBL:AB061841 EMBL:AK315498 EMBL:BC004324 EMBL:BC007977
IPI:IPI00221092 PIR:A39760 RefSeq:NP_001011.1 UniGene:Hs.397609
ProteinModelPortal:P62249 SMR:P62249 IntAct:P62249
MINT:MINT-5001167 STRING:P62249 PhosphoSite:P62249 DMDM:50403607
PaxDb:P62249 PeptideAtlas:P62249 PRIDE:P62249 DNASU:6217
Ensembl:ENST00000251453 GeneID:6217 KEGG:hsa:6217 UCSC:uc002olk.3
GeneCards:GC19M039923 H-InvDB:HIX0212796 HGNC:HGNC:10396 MIM:603675
neXtProt:NX_P62249 PharmGKB:PA34796 GenomeRNAi:6217 NextBio:24141
ArrayExpress:P62249 Bgee:P62249 CleanEx:HS_RPS16
Genevestigator:P62249 GermOnline:ENSG00000105193 Uniprot:P62249
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
>UNIPROTKB|F1SEG5 [details] [associations]
symbol:F1SEG5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574
Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 OMA:RSEPKKF
EMBL:FP236263 Ensembl:ENSSSCT00000011719 Uniprot:F1SEG5
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
>UNIPROTKB|Q29201 [details] [associations]
symbol:RPS16 "40S ribosomal protein S16" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0103
PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:GGGFMGQ
GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171
OrthoDB:EOG4XWG03 EMBL:F14526 EMBL:AY550068 RefSeq:NP_001131092.1
RefSeq:XP_003355952.1 RefSeq:XP_003355953.1 RefSeq:XP_003355954.1
UniGene:Ssc.16651 ProteinModelPortal:Q29201 SMR:Q29201
STRING:Q29201 PRIDE:Q29201 Ensembl:ENSSSCT00000024602
GeneID:100623279 GeneID:414397 KEGG:ssc:100623279 KEGG:ssc:414397
Uniprot:Q29201
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
>MGI|MGI:98118 [details] [associations]
symbol:Rps16 "ribosomal protein S16" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360
MGI:MGI:98118 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627
GO:GO:0015935 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960
OMA:GGGFMGQ GeneTree:ENSGT00390000013067 CTD:6217
HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 EMBL:M11408 EMBL:AK010613
EMBL:AK010641 EMBL:AK011060 EMBL:AK019400 EMBL:AK083946
EMBL:AK088413 EMBL:AK088716 EMBL:AK150808 EMBL:AK168207
EMBL:AK169328 IPI:IPI00469918 PIR:S11623 RefSeq:NP_038675.2
UniGene:Mm.702 ProteinModelPortal:P14131 SMR:P14131 IntAct:P14131
STRING:P14131 PhosphoSite:P14131 PaxDb:P14131 PRIDE:P14131
Ensembl:ENSMUST00000082134 GeneID:20055 KEGG:mmu:20055
InParanoid:P14131 NextBio:297567 Bgee:P14131 CleanEx:MM_RPS16
Genevestigator:P14131 GermOnline:ENSMUSG00000037563
GermOnline:ENSMUSG00000060419 Uniprot:P14131
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
>RGD|621031 [details] [associations]
symbol:Rps16 "ribosomal protein S16" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=ISO;TAS] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015935 "small
ribosomal subunit" evidence=ISO;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=ISO] InterPro:IPR000754
InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 RGD:621031
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364
GO:GO:0042274 GO:GO:0022627 eggNOG:COG0103 PANTHER:PTHR21569
KO:K02960 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG4XWG03 EMBL:X17665
IPI:IPI00421451 PIR:S09041 RefSeq:NP_001162617.1 UniGene:Rn.29791
ProteinModelPortal:P62250 SMR:P62250 IntAct:P62250 STRING:P62250
PhosphoSite:P62250 PRIDE:P62250 GeneID:140655 KEGG:rno:140655
UCSC:RGD:621031 InParanoid:P62250 NextBio:620612
ArrayExpress:P62250 Genevestigator:P62250
GermOnline:ENSRNOG00000019578 Uniprot:P62250
Length = 146
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 74 GRRKSAIARVFIKIGSGKMTINRIPADKYFSRKTGLMVISQPLKLTKHTKT-FDIKINVR 132
GR+K+A A K G+G + +N P + R ++ L L K DI++ V+
Sbjct: 14 GRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVK 73
Query: 133 GGGESGQYGAVRHGITRA 150
GGG Q A+R I++A
Sbjct: 74 GGGHVAQIYAIRQSISKA 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 154 154 0.00088 105 3 11 22 0.46 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 534 (57 KB)
Total size of DFA: 122 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.34u 0.12s 14.46t Elapsed: 00:00:01
Total cpu time: 14.34u 0.12s 14.46t Elapsed: 00:00:01
Start: Thu Aug 15 12:47:57 2013 End: Thu Aug 15 12:47:58 2013